Carg15130 (gene) Silver-seed gourd

Overview
NameCarg15130
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCleavage and polyadenylation specificity factor subunit 2
LocationCucurbita_argyrosperma_scaffold_078 : 686357 .. 694764 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTCCCTAAAACCTCCTTGCTCCTCCAAAACTAGGGAGTTGCAGATAGTTTGGAGCTTCGTATCAATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGCGTGTACAATGAAAATCCTTTATCCTATTTGGTCTCCGTTGACGGCTTCAACTTCCTTATCGACTGTGGTTGGAACGACCACTTCGATCCTGCTCTTCTTCAACCTCTATCCAGGTTTGCTTTCTCAACATTTCTTTGCAATCTGTTTTGTTTGAGCTGAACTCGCAAGTTTCATGTATTGAAGCTGCTGAATGCCATGTGACTGTCGACTGGTACTAGCCGAGTAAGGAAATCAGTGATACCTAGCTGTTTTCGCCTGTTCTGAAACGTGTTAGGTTCCTAAGAAAATCGGTGGAATGGTTCATTAGAATTTCTTCTTACATTTGAATGTAACAATTATTTTTTGGATTAAAGGTTCGGAATGAATAATCACTCGCTAAAAGGCTTCTCAACAATTGGGCTACAAACTCTTGATTTTTGTTTACTTCATCGCCCTTAATACGTAATTGTGGTTTTTCAGGGTGGCATCGACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTCGGTGCCCTTCCATATGCCATGAAACAACTTGGACTTTCTGCTCCAGTATATTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTTTATAGCGAGGAAGGTAATTTTTTTTTTTCATATAATTTGGTTCCTTAATGTTATGAATTAACCAAATCAAACAAGCTACTACACTATTTACCTGAACTACTTGCCATCAAGTTTCTTTAAAACTCAAGAACCTAGTTGTATAACCTATTGAATAGATCCTACTAAAGTAAGCTTGTATACTTGCGGTCAAATTTGAAGTGTTGTGAAGAAAATAGTCCTTTTTGTTGTAGCCTTGTGAGCGTGGTAGACTCCTACAATTATGTGAGTGATGACTGACCAAGCATGTTTTGGTTAGTTTAAATATGATATTTATGCTGTTAACTTATCTAGGTCAATCATTACTCGCCAGTTTATGTGGGCTTGGACCCTCGAAATTTTTGCTGTATGTTGTCTTAAAGAATTTTAATTTCTTTTTTGCTTGTGTGTGGGTGGGGGGTGGGGAGTTATTGTCGGATCCAAGTTATATATTTCGTAATTACATGGTTGCTAATCCGTTGCCGACATTTCATATTAGCATTGGTTATGAGTAGATTTTTTTTGTTTAATAATATTTAAGTCAGAATAATAGTCTCTGCTTCACCAATTTACCATTGATTCCTTATTGTTGTTTTCACTAACTTTTCTTTACTGTCTTTGTGCTGGGTGTTGCCATATGGACACCTCCCCTTTCCCTTATGCAGCAAGTATCAGAGTTTGATCTATTTACGCTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGGCTAACATACTCCCAGAATCATCATCTTTCAGGTGCCTTTTCTTGGTCTTGTTTATTGTTAGATCAAAGCTAATCGATCCCTCTTTCTCTTGGTTGCCTAATGATTGTATATGGTCTATACTGATGACCCACCTAATGTATCTTGGAAAATCATTCAGTCATTCATCTGAGAAGCACAAACATGTTATAGCATGATATGTTACAATAATGACTGTCCTTCCGGAATTAAAAGAAAAAAAGCGAGGGAACCTCAGGACACGCCCATGACAACACATATTTTTTGAAATACTTCTGTAAAGTATGTTATGATATAGGATTTAAGATATGTGTCTCCTATGGGAAATTAAAGAAGCCAATGACATGCTTCCAAATATGCTACATTTTATAACAAAAACTTATAAAAGCAATGGAAAACCAAATATAAGTATTTTGTCATTATTCAATGTCTTAAAAGAAAAGGAAATTCAGAATAAAATATGTCCTACCATTGATATGCTTAAGTTTTTAATATTTGAACTCCTTATCGCCCCTCCTTTTGTATACTTTTTTTGTTCAAAGCTTTTGTCACTTGTTCACAGAAATTCCTATGCTCTCTTATTTTGTTGTATCCTCATGCTCGAGCTTGTTTCATTGTGTTGAAATAAAAAGAAATTATAAAAACAATTAACAATTGAGTTTGAATGTCCAATTAGCGGTGAAGTGTTAAGCTATCTAACTTATATTATATGAAGCATGGCCTACTTCTTAGACTGAATTGTTCATTCTCCATGGTTGTTCATGTAGCAATGTGATAATTTGTTAAAATTTTATTGATGAAAAAACCGTCTTTCTTTGAGAATAAATGAAAGCAATAAAAAGGAGAGCCTCAATACAAAAGGAGCAAAATCAATAGGCTAATAGAAACGACTAAGCTACAAAAAGAAGCTCCAATTTAAAATATATAAATTTCATTTTGCTAGATGAGAAAAAGCTTTCATTAAAAACAATAAAAGAATATGGAGGAAGCCAGAAAGCTTAACAAAACAATGGCAAACTTGAAACCACTCAATATTTTCAACAAAAGAAGTAGATATCTCAAAATAAAGGAAAAGTAAAGTCCACAAGCCAATATTGTACTGTTTTGCACTCAGGAAGAAGGTTAGGACTTACTATTTGTTTACCATTACTTAGGTTGTGCATAACTATTTTCCCCTGTTTTCTCTTCTCTGATACTTTATGACAGGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATTTATTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGATTTTAACCACCGCAAGGAAAGGTATGGTAACCGTTGTTACAAGCACCAACACCTGCGTTAAGACTACTCACACAAAAGTGTAATACACAATGCTTATTTAACTTACTATCAGGCATCTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACGGATGCTTATAATGCTCTAAATAATCAGCCTTACAGGCGTCAGAAGGACAAAGAATTTGGAGGTACTTAAAATCCTGCCAGAGATTCCATCTTTTGCTTCATTCCCCCCTAACATGCTCTTCTTGTAGCATAAAAGTATATTCTAAAAGTCCTTTGTTATGGATGCTTAGTCGTTTTTGCCAAGAATTGTTGATGGAAGTTATCATTTTGATTAACATAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTAGAATGGGTTAGTTGGTGAAAGACAAAACTTTTGTCTCTTCTCTTTTTTTTGTTTAAATTTTTTTATAATATTTAGTCTCATTGTTATTACTGCAGTACTGGGAAGAGGAAAGTTTAAATTTTCCCATTTTCTTTTTAACTTACGTCGCATCTAGCACAATTGATTATATCAAGAGTTTCCTAGAGTGGATGAGTGATTCAATAGCAAAGTCTTTTGAACACACACGGAACAACGCCTTTCTTCTCAAGTAAGTATTCTTCCAAGTATTACATTTTTTTTTAATCTTTTGATAGGAAACAGGGGGTAGTTACCGGTCAATCCCATTGCCTTGAGGGTTCAAGTCTTACATATTTCTCACTCGATAGCATGCTTTATTTACCTTTGATTAAAGAAATTGAGATAGACTAAAATAAGTTTTAGTGTAGCAGAGTGCTGTGTGAAGTCATACAAATGGAACTAGGAACTCTTACCAGGCTGTTGTTTTAAATCTTGCAGGCATGTCACCCTTCTAATAAACAAAAGTGAACTTGATAATGCTCCAGATGGACCAAAGGTTGATTGCAACAAATTGTTAATTTTGTTATATGTTTACTTCCTTTTGCTTCAGGTTTACATGTATTGACGTCTATATGGGGTGTCTTATAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAACGGATGCCAAAAATCTCATCCTTTTTTCTGAAAGAGGCCAGGTATTCTTTAGTAACTTGTTTACATGATTAGCAAGCCGTCTTCTAGTGATTTTTCATGTCTTGGTCTATTTATCTTCAGTCCTCGGAACTGAGTAACTGTTCTCCAAAATTGATTTGTTACACCTTGCATAAATGCCGTTCCATCTTTGTTTCCATTTTCTAAACATCTTCCATTTGACTAGAGTTTCTTTAATAGAAAATCAAAACACTTTTAATATTATTCGTAGTTTCTTTATTTGTTGTTCTTGTAGAAGTTCTAGCAAGTCATTGATTCATTGGTAGTCAATTACTCTAGGTGCACTTCGTTTCCTTGTCTTTTTCATTTTCCTCCTCGAAAAATTCCTTTGTGGCTGATGACTTAGTTTTGTTAGGGAGCTTTTTTCCTTTTCGTTCGATTTCCATCGTCCTTTGTTTGATAGGAAAATGACGGATGTCACTATCATTCTATCTTTGATAGAAGAGTTTGATTTTAGGATCGGGAGAAGGAGTGTGTGTACTTGGAGCCCTAACTACCTCTTGCCTATGTATTATTTCATTTTTTTCTCAATGAAAAGTTGTTTCTCTTAAAAAATGTATACTCTTGGTGCCATGGGCGTGTCTTGCTATGACTGTGCTTGGAAGATGGAAAAGTAATTTTTTCTCCTTTCTTTCTTTCTCCCCCTTCTGCATATACCTGATCAACTGCATGCTTCTTTGAACTCTTATAATTTCTACACTTATATTGTGAATGTGTAACCCCCATCAGTTGGAAAATGTAGTTTGGAACTTTGGCCCGCATGCTTCAAGCAGATCCACCTCCCAAAGCTGTTAAGGTGACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTCGTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCTAAAGCATCACATGGAACTGATAACGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGTAGCACCAGATGGTATGATGATTGATAACTGCAGTTTTCTAGACACGTGCAAACTTTTTTTAGCAAGGAAATTATGAGCATCCAAACTTTTTACTTGAATTGGAAAAGACACTTAAAGTGAAAATAGGATTTGGTTGCATAAATATTAGCAAAATGTTTTCCCAAACTCTATCATGGAAACATAGAACACGAAGTGTACACTGATGTGCCAGGTTTTAAGATGGTTTAGAAATGCTATAAATATCCCCATTGCTTGGGCACCACCAGTTATTTTAGTTGAAGGTGTCACTATCTTTTCTTAGTCCTAAGAATATACATGCATTTCAGTGACACTAGAAATGAGGATCCTAACCTGCAATCATCAAATGGTCTGTGAAAAATTCCCCATACATGCCTATGATTGTGTTTTTTTATTGGAGTTGTTTTAATGTACGTTTTAATAATTGTTAGTGGAATGGATTGGTTGCTGATTGTATCTTGCAGTAGTTGGTTCACATGGAGGTGCATACCGAGACATATTTATTGATGGTTTTGTTCCTCCTTCAACAAGCGTTTCTCCAATGTTTCCCTTTTATGAAAACACTTCCGCATGGGATGATTTTGGTGAAGTAATCAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAATCAGCGCCGCATGTAAGATTCTTTGATGTAATTATCTGCATTTAATTCCTGGACACATGTAAGATTGATTGAAATGAAATGTTAAATTGGTTGATAGGTTGTGGGTTGAAATAGAAAGCCTTTCTTGTGGTAAAATTTAGGAAACCGATTTGTTTTATTTATTTATTATTATTATTATTATTATTTTGAGAATACAAACCATTTTGTTCAATAACATTTGGAATGTAAGATCCTGCTTGGGCTGGTTTTAGGAATAGGATATATATATATATATATTTAGTTTTGAGATTTATCAATATTATTAATGTTGATGAGTAACCAACATTGAGAGGAATGAAAAGTAACAGCCAAGGACTGCTATCAAATTCCCTGGGAACAGCCGTGTGAAGATCAAAATGCATCCATGTAGCCAATTCATATAGTTGGGACACACAGTCAAATGTACTTTGATGCCCTTCGTCATTTTTTGTTGTGAATGGATGATTGCTAATTTACTAGAATCATACTTACAGGGTGGTGTGGACGTGGATGGAAAGCTAGATGAAACTGCTGCTAACTTGATTCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTAAGTTTATCTCCTGTTAAAGTTCTGTTTAAGGTTTATATTGTCGGCTGAATTCACATGAATGTGTATTTAATGTTATTGTCTCCAGTATATGTATATAAAGTTTATTTTAAGGAAAATATTTGACTTAATAGGAGAAGGTTATAATGGGTTAATAAAATATCTCTCTGATCTGTCTTTGTGTGTGTATGTGTATATATATATATATATTTTTTTTTTTATATTTATTATTATTTTTTTTTTCTGATATCACTTTTTTTTTTTTTAAAGTGCTTAATATTTATACTTTCCATTGATCATCTTTGTACCTATGTTCAATTTGATGATAGAATCAGGTTATTTATCTATTGATTGGATCAATGATTTTTTCTGTAATTTCCCTATCCAGGTCCAAGTTAAATGCTCATTGCATTACATGGATTTCGAAGGTCGTTCAGACGGGAGATCAATTAAATCAATTCTCTCCCACGTTGCTCCCTTGAAGCTTGTATGGTGTTCTTTTACAACTGCTCTTGTGTTGTGTATGAGCTTGTGCACTTGTAACTATTGATCGTAGGGTGAAAGTTCAGTTTAGCTAAGTTGGTGTATTCTGAGAAATTTCCTATTAGCCGGATTTTTAAATTTCCACATCTTGTTGTTGCAATAGCTTTTTGTAGACATTGTTCAGTGTTACCACAAAAACTACTTTAATCAACGATTCAACCGTTTTGATTCTATTTATTTATTTAAATTGTTGTTTGAAGGTCTTGGTGCATGGAACTGCAGAGGCCACTGAGCATCTTAAACAACATTGCCTTAAAAATGTCTGCCCCCATGTCTATGCCCCCCAAATTGAAGAAACGATTGATGTTACTTCTGATCTGTGTGCATATAAGGTACAGTCGAGACTATTCATTTCCTTTTCAGGTTGTCATTTCAAATATTGAGACTAACAAATCTCCAATTCTTGAATTTCAGGTACAACTTTCAGAGAAGCTGATGAGCAATGTGCTGTTTAAGAAGGTAAAGTTTCTGGAGATCCATGAAATTTTCCTCCAAAATTAAGTTGTATTTTGTATTATTGTAAGCACTCTTCCCTACGACGCCTGACATAATTTTGAAAACAGCTAGGAGATTATGAAATCTCTTGGCTTGATGCTGACGTAGGAAAGACCGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCCGCTTTGCCTCATAAATCTGTTCTTGTTGGGGATCTAAAAATGGCTGACTTCAAACAATTTCTTTCCAGCAAGGGAATACAGGTATCTTTGCCTGTGAATCCCTCCCTTCTCAATGGGAACGAATATCTCCTTTTTGACATGTATAATAGACACTAAAGCTACAATAGAGCGTTAAAAGTGAACGATATGATCGTCCTATATGCATTGCAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTTACCCTACGCAAGGTTTCAGATGCAAGTCAGAAGGTGAGAAATTCTAAAAAAAGGGGGAAATAGATAAGTTGAATATGGCTCTTAATGTTGCTTATCGAATTTGAACCACGTTTCAGCTTCATACCACAAATGAATGCATATTTGCTTGTGATGGTGTTGTTTGGCTAGTACCATTTTCATGGTTTGCTTCTAAGCATAAACATAGTATATTCAATTTATGCAGGGTGGTGGTTCTGGTACCCAACAAGTTGTCATCGAAGGGCCCTTATGTGAAGATTATTACAAAATTCGGGAGCTTTTGTATTCACAATTTTATTTGCTATAGTTGAGATGGGTCGTTGGACATGAAAGAGATCCAGCAATTTTAATGATAAACTGCCTACTCCAAAATGTATTGATCTTTTTTGTTCCTGAAATGTGTTTTGAGTTATGTTTCACGGCTGAAATTAGAACAAAATTTCCTTTTTTCTTTTTTTTTTTTCCCATTGTAGCATATGAAACCGAAAAATGTAAGCCAACTCATGCTTCTATGGTTGCAATACCATGGTAACCATAAGTTGATTGGTCTATGAAGATGCAGCCATGGCAAACCTTAACTTCGGTCGGGGAACTCTCAAAACCTATCAGAATATGTTACTAGCGAAGCGTTTAGAATTATTGTTCATGTGCGTAAAATGTTTCTTTGAAACA

mRNA sequence

ATTTTCCCTAAAACCTCCTTGCTCCTCCAAAACTAGGGAGTTGCAGATAGTTTGGAGCTTCGTATCAATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGCGTGTACAATGAAAATCCTTTATCCTATTTGGTCTCCGTTGACGGCTTCAACTTCCTTATCGACTGTGGTTGGAACGACCACTTCGATCCTGCTCTTCTTCAACCTCTATCCAGGGTGGCATCGACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTCGGTGCCCTTCCATATGCCATGAAACAACTTGGACTTTCTGCTCCAGTATATTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTTTATAGCGAGGAAGCAAGTATCAGAGTTTGATCTATTTACGCTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGGCTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATTTATTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGATTTTAACCACCGCAAGGAAAGGCATCTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACGGATGCTTATAATGCTCTAAATAATCAGCCTTACAGGCGTCAGAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTAGAATGGTACTGGGAAGAGGAAAGTTTAAATTTTCCCATTTTCTTTTTAACTTACGTCGCATCTAGCACAATTGATTATATCAAGAGTTTCCTAGAGTGGATGAGTGATTCAATAGCAAAGTCTTTTGAACACACACGGAACAACGCCTTTCTTCTCAAGCATGTCACCCTTCTAATAAACAAAAGTGAACTTGATAATGCTCCAGATGGACCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAACGGATGCCAAAAATCTCATCCTTTTTTCTGAAAGAGGCCAGTTTGGAACTTTGGCCCGCATGCTTCAAGCAGATCCACCTCCCAAAGCTGTTAAGGTGACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTCGTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCTAAAGCATCACATGGAACTGATAACGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGTAGCACCAGATGTAGTTGGTTCACATGGAGGTGCATACCGAGACATATTTATTGATGGTTTTGTTCCTCCTTCAACAAGCGTTTCTCCAATGTTTCCCTTTTATGAAAACACTTCCGCATGGGATGATTTTGGTGAAGTAATCAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAATCAGCGCCGCATGGTGGTGTGGACGTGGATGGAAAGCTAGATGAAACTGCTGCTAACTTGATTCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTCCAAGTTAAATGCTCATTGCATTACATGGATTTCGAAGGTCGTTCAGACGGGAGATCAATTAAATCAATTCTCTCCCACGTTGCTCCCTTGAAGCTTGTATGGTCTTGGTGCATGGAACTGCAGAGGCCACTGAGCATCTTAAACAACATTGCCTTAAAAATGTCTGCCCCCATGTCTATGCCCCCCAAATTGAAGAAACGATTGATGTTACTTCTGATCTGTGTGCATATAAGGTACAGTCGAGACTATTCATTTCCTTTTCAGGTTGTCATTTCAAATATTGAGACTAACAAATCTCCAATTCTTGAATTTCAGGTACAACTTTCAGAGAAGCTGATGAGCAATGTGCTGTTTAAGAAGCTAGGAGATTATGAAATCTCTTGGCTTGATGCTGACGTAGGAAAGACCGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCCGCTTTGCCTCATAAATCTGTTCTTGTTGGGGATCTAAAAATGGCTGACTTCAAACAATTTCTTTCCAGCAAGGGAATACAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTTACCCTACGCAAGGTTTCAGATGCAAGTCAGAAGGGTGGTGGTTCTGGTACCCAACAAGTTGTCATCGAAGGGCCCTTATGTGAAGATTATTACAAAATTCGGGAGCTTTTGTATTCACAATTTTATTTGCTATAGTTGAGATGGGTCGTTGGACATGAAAGAGATCCAGCAATTTTAATGATAAACTGCCTACTCCAAAATGTATTGATCTTTTTTGTTCCTGAAATGTGTTTTGAGTTATGTTTCACGGCTGAAATTAGAACAAAATTTCCTTTTTTCTTTTTTTTTTTTCCCATTGTAGCATATGAAACCGAAAAATGTAAGCCAACTCATGCTTCTATGGTTGCAATACCATGGTAACCATAAGTTGATTGGTCTATGAAGATGCAGCCATGGCAAACCTTAACTTCGGTCGGGGAACTCTCAAAACCTATCAGAATATGTTACTAGCGAAGCGTTTAGAATTATTGTTCATGTGCGTAAAATGTTTCTTTGAAACA

Coding sequence (CDS)

ATGGGAACCTCTGTTCAGGTGACGCCTCTTTGCGGCGTGTACAATGAAAATCCTTTATCCTATTTGGTCTCCGTTGACGGCTTCAACTTCCTTATCGACTGTGGTTGGAACGACCACTTCGATCCTGCTCTTCTTCAACCTCTATCCAGGGTGGCATCGACGATTGATGCAGTTTTGATATCACATCCTGATACACTTCACCTCGGTGCCCTTCCATATGCCATGAAACAACTTGGACTTTCTGCTCCAGTATATTCCACTGAACCCGTGTATCGATTGGGCCTTCTTACAATGTATGATCAGTTTATAGCGAGGAAGCAAGTATCAGAGTTTGATCTATTTACGCTGGATGATATCGATTCTGCTTTCCAAGTTGTAACCAGGCTAACATACTCCCAGAATCATCATCTTTCAGGCAAAGGAGAGGGAATAGTTATTGCACCTCATGTGGCTGGGCATTTATTGGGGGGAACCCTATGGAAGATAACTAAGGATGGAGAAGATGTTATATATGCTGTTGATTTTAACCACCGCAAGGAAAGGCATCTGAATGGAACCATTCTAGAGTCATTTGTGCGACCTGCTGTATTGATAACGGATGCTTATAATGCTCTAAATAATCAGCCTTACAGGCGTCAGAAGGACAAAGAATTTGGAGATACTATTCAGAAGACCTTAAGAGCTAATGGAAATGTCTTACTTCCTGTTGATACTGCTGGGCGAGTGTTGGAGCTTATTCAAATTTTAGAATGGTACTGGGAAGAGGAAAGTTTAAATTTTCCCATTTTCTTTTTAACTTACGTCGCATCTAGCACAATTGATTATATCAAGAGTTTCCTAGAGTGGATGAGTGATTCAATAGCAAAGTCTTTTGAACACACACGGAACAACGCCTTTCTTCTCAAGCATGTCACCCTTCTAATAAACAAAAGTGAACTTGATAATGCTCCAGATGGACCAAAGGTTGTTCTAGCATCAATGGCTAGTTTGGAAGCTGGTTACTCACATGACATTTTTGTTGAGTGGGCAACGGATGCCAAAAATCTCATCCTTTTTTCTGAAAGAGGCCAGTTTGGAACTTTGGCCCGCATGCTTCAAGCAGATCCACCTCCCAAAGCTGTTAAGGTGACTGTGTCTAAGAGAGTCCCTTTGACTGGAGATGAGCTCGTTGCTTATGAAGAAGAGCAAAACAGGAAAAAGGAAGAAGCTCTTAAGGCTAGTTTGCTCAAGGAGGAACAATCTAAAGCATCACATGGAACTGATAACGATACTGGTGATCCAATGATCATTGATGCTAGCAGTAATGTAGCACCAGATGTAGTTGGTTCACATGGAGGTGCATACCGAGACATATTTATTGATGGTTTTGTTCCTCCTTCAACAAGCGTTTCTCCAATGTTTCCCTTTTATGAAAACACTTCCGCATGGGATGATTTTGGTGAAGTAATCAATCCTGATGATTATGTAATTAAGGATGAAGACATGGACCAATCAGCGCCGCATGGTGGTGTGGACGTGGATGGAAAGCTAGATGAAACTGCTGCTAACTTGATTCTGGATATGAAGCCTTCAAAAGTTGTATCTAACGAATTGACAGTCCAAGTTAAATGCTCATTGCATTACATGGATTTCGAAGGTCGTTCAGACGGGAGATCAATTAAATCAATTCTCTCCCACGTTGCTCCCTTGAAGCTTGTATGGTCTTGGTGCATGGAACTGCAGAGGCCACTGAGCATCTTAAACAACATTGCCTTAAAAATGTCTGCCCCCATGTCTATGCCCCCCAAATTGAAGAAACGATTGATGTTACTTCTGATCTGTGTGCATATAAGGTACAGTCGAGACTATTCATTTCCTTTTCAGGTTGTCATTTCAAATATTGAGACTAACAAATCTCCAATTCTTGAATTTCAGGTACAACTTTCAGAGAAGCTGATGAGCAATGTGCTGTTTAAGAAGCTAGGAGATTATGAAATCTCTTGGCTTGATGCTGACGTAGGAAAGACCGAGAATGGAACGTTGTCTTTACTTCCCCTCTCAAAGGCCGCTTTGCCTCATAAATCTGTTCTTGTTGGGGATCTAAAAATGGCTGACTTCAAACAATTTCTTTCCAGCAAGGGAATACAGGTTGAATTTGCTGGGGGTGCTTTGAGATGTGGCGAGTATGTTACCCTACGCAAGGTTTCAGATGCAAGTCAGAAGGGTGGTGGTTCTGGTACCCAACAAGTTGTCATCGAAGGGCCCTTATGTGAAGATTATTACAAAATTCGGGAGCTTTTGTATTCACAATTTTATTTGCTATAG

Protein sequence

MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Homology
[Close]
BLAST of Carg15130 vs. NCBI nr
Match: XP_022922464.1 (cleavage and polyadenylation specificity factor subunit 2 [Cucurbita moschata])

HSP 1 Score: 1372.5 bits (3551), Expect = 0.0e+00
Identity = 700/767 (91.26%), Postives = 712/767 (92.83%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQ+DPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQSDPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHLKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEIS
Sbjct: 601 HCLKNVCPHV-YAPQIEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIS 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG
Sbjct: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. NCBI nr
Match: XP_022985441.1 (cleavage and polyadenylation specificity factor subunit 2 [Cucurbita maxima])

HSP 1 Score: 1371.3 bits (3548), Expect = 0.0e+00
Identity = 700/767 (91.26%), Postives = 711/767 (92.70%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHIKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEIS
Sbjct: 601 HCLKNVCPHV-YAPQIEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIS 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG
Sbjct: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKVSDA QKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVSDARQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. NCBI nr
Match: XP_023552428.1 (cleavage and polyadenylation specificity factor subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1371.3 bits (3548), Expect = 0.0e+00
Identity = 700/767 (91.26%), Postives = 711/767 (92.70%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DND GDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG
Sbjct: 421 DNDIGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHLKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEIS
Sbjct: 601 HCLKNVCPHV-YAPQIEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIS 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG
Sbjct: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. NCBI nr
Match: XP_004140773.1 (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis sativus] >KGN57386.1 hypothetical protein Csa_3G182220 [Cucumis sativus])

HSP 1 Score: 1332.8 bits (3448), Expect = 0.0e+00
Identity = 678/767 (88.40%), Postives = 700/767 (91.26%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLTGDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSNVAPDV  SHGGAYRDI IDGFVPPST V+PMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHLKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEI+
Sbjct: 601 HCLKNVCPHV-YAPQIEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIT 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDA+VGKTENGTLSLLPLSKA  PHKSVLVGDLKMADFKQFL+SKGIQVEFAGGALRCG
Sbjct: 661 WLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKV+DASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVTDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. NCBI nr
Match: XP_008439247.1 (PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo])

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 675/767 (88.01%), Postives = 698/767 (91.00%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQV+TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLTGDEL+AYEEEQNRK  EALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKXXEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSN APDV  SHGGAYRDI IDGFVPPSTSV+PMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHLKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEI+
Sbjct: 601 HCLKNVCPHV-YAPQVEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIA 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDA+VGKTENGTLSLLPLSKA  PHKSVLVGDLKMADFKQFL+SKGIQVEFAGGALRCG
Sbjct: 661 WLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKV+DASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVTDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. TAIR10
Match: AT5G23880.1 (cleavage and polyadenylation specificity factor 100)

HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 551/770 (71.56%), Postives = 646/770 (83.90%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGLSAPVY+TEPV+RLGLLTMYDQF++RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   +FPI+FLTYV+SSTIDY+KSFLEWMSDSI+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFG 360
           LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFVEWA D +NL+LF+E GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKASLLKEEQSKASH 420
           TLARMLQ+ PPPK VKVT+SKRVPL G+EL+AYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDD 480
           G+D+++ +PMIID  +    DV+GSHG AY+DI IDGFVPPS+SV+PMFP+Y+NTS WDD
Sbjct: 421 GSDDNSSEPMIID--TKTTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+ A H G DVDG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLK 600
           L  MD+EGRSDGRSIKS+++HV+PLKLV                    +   ++   +  
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLV--------------------LVHAIAEATEHL 600

Query: 601 KRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYE 660
           K+  L  IC H+         +   I       S +  ++VQLSEKLMSNV+FKKLGD E
Sbjct: 601 KQHCLNNICPHV---------YAPQIEETVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSE 660

Query: 661 ISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFA-GGAL 720
           ++W+D++VGKTE    SLLP+  AA PHK VLVGDLK+ADFKQFLSSKG+QVEFA GGAL
Sbjct: 661 VAWVDSEVGKTERDMRSLLPMPGAASPHKPVLVGDLKIADFKQFLSSKGVQVEFAGGGAL 720

Query: 721 RCGEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           RCGEYVTLRKV    QKGG SG QQ++IEGPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 RCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Carg15130 vs. TAIR10
Match: AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II)

HSP 1 Score: 138.3 bits (347), Expect = 2.0e-32
Identity = 93/357 (26.05%), Postives = 166/357 (46.50%), Query Frame = 0 

Query: 22  LVSVDGFNFLIDCGW-------NDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYA 81
           +V+++G   + DCG        N + + +L+       + I  ++I+H    H+GALPY 
Sbjct: 20  VVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMDHVGALPYF 79

Query: 82  MKQLGLSAPVYSTEPVYRLGLLTMYD-QFIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQ 141
            +  G + P+Y + P   L  L + D + +   +  E +LFT   I +  + V  +   Q
Sbjct: 80  TEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQ 139

Query: 142 NHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVR 201
              +    E + I  + AGH+LG  +         ++Y  D+N   +RHL    ++  ++
Sbjct: 140 TIQVD---EDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDR-LQ 199

Query: 202 PAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYW 261
             +LI+++  A   +  +  +++EF   + K +   G  L+P    GR  EL  +L+ YW
Sbjct: 200 LDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYW 259

Query: 262 EEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINKSEL 321
           E  ++  PI+F + +      Y K  + W S ++ +  +H  +N F  K+V        L
Sbjct: 260 ERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKE--KHNTHNPFDFKNVKDF--DRSL 319

Query: 322 DNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGTLARMLQADPP 371
            +AP GP V+ A+   L AG+S ++F  WA    NL+        GT+   L A  P
Sbjct: 320 IHAP-GPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKP 367

[Close]
BLAST of Carg15130 vs. TAIR10
Match: AT3G07530.1 (Beta-Casp domain (InterPro:IPR022712))

HSP 1 Score: 50.4 bits (119), Expect = 5.6e-06
Identity = 39/138 (28.26%), Postives = 61/138 (44.20%), Query Frame = 0 

Query: 228 ANGNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSD-- 287
           A G+ L+ +   G VL+L+++L    E  SL  PIF ++ VA   + Y  +  EW+ +  
Sbjct: 343 AGGSTLITITRIGIVLQLLELLSNSLESSSLKVPIFVISSVAEELLAYTNTIPEWLCEQR 402

Query: 288 -----SIAKSFEHTRNNAFLLKHVTLLINKSELDNAP----DGPKVVLASMASLEAGYSH 347
                S   SF H +       H+   I+   L  A       P +V AS  SL  G S 
Sbjct: 403 QEKLISGEPSFGHLKFIKNKKIHLFPAIHSPNLIYANRTSWQEPCIVFASHWSLRLGPSV 462

Query: 348 DIFVEWATDAKNLILFSE 355
            +   W  D K+L++  +
Sbjct: 463 QLLQRWRGDPKSLLVLED 480

[Close]
BLAST of Carg15130 vs. Swiss-Prot
Match: sp|Q9LKF9|CPSF2_ARATH (Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CPSF100 PE=1 SV=2)

HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 551/770 (71.56%), Postives = 646/770 (83.90%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLH+GALPYAMKQLGLSAPVY+TEPV+RLGLLTMYDQF++RKQVS+FDLFTLDDID
Sbjct: 61  SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           RHLNGT+L+SFVRPAVLITDAY+AL  NQ  R+Q+DKEF DTI K L   GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAF 300
           GRVLEL+ ILE +W +   +FPI+FLTYV+SSTIDY+KSFLEWMSDSI+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 301 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFG 360
           LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFVEWA D +NL+LF+E GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 361 TLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKASLLKEEQSKASH 420
           TLARMLQ+ PPPK VKVT+SKRVPL G+EL+AYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 421 GTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDD 480
           G+D+++ +PMIID  +    DV+GSHG AY+DI IDGFVPPS+SV+PMFP+Y+NTS WDD
Sbjct: 421 GSDDNSSEPMIID--TKTTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480

Query: 481 FGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           FGE+INPDDYVIKDEDMD+ A H G DVDG+LDE  A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLK 600
           L  MD+EGRSDGRSIKS+++HV+PLKLV                    +   ++   +  
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLV--------------------LVHAIAEATEHL 600

Query: 601 KRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYE 660
           K+  L  IC H+         +   I       S +  ++VQLSEKLMSNV+FKKLGD E
Sbjct: 601 KQHCLNNICPHV---------YAPQIEETVDVTSDLCAYKVQLSEKLMSNVIFKKLGDSE 660

Query: 661 ISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFA-GGAL 720
           ++W+D++VGKTE    SLLP+  AA PHK VLVGDLK+ADFKQFLSSKG+QVEFA GGAL
Sbjct: 661 VAWVDSEVGKTERDMRSLLPMPGAASPHKPVLVGDLKIADFKQFLSSKGVQVEFAGGGAL 720

Query: 721 RCGEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           RCGEYVTLRKV    QKGG SG QQ++IEGPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 RCGEYVTLRKVGPTGQKGGASGPQQILIEGPLCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Carg15130 vs. Swiss-Prot
Match: sp|Q652P4|CPSF2_ORYSJ (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0569400 PE=2 SV=1)

HSP 1 Score: 970.3 bits (2507), Expect = 1.2e-281
Identity = 498/769 (64.76%), Postives = 593/769 (77.11%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPL G Y E PL YL++VDGF FL+DCGW D  DP+ LQPL++VA TIDAVL+
Sbjct: 1   MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DT+HLGALPYAMK LGLSAPVY+TEPV+RLG+LT+YD FI+R+QVS+FDLFTLDDID
Sbjct: 61  SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           +AFQ V RL YSQNH L+ KGEGIVIAPHVAGH LGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121 AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNN  Y+RQ+D++F D + K L   G+VLLP+DTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLE++ ILE YW +  L +PI+FLT V++ST+DY+KSFLEWM+DSI+KSFEHTR+NAFL
Sbjct: 241 RVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LK VT +INK EL+   D PKVVLASMASLE G+SHDIFV+ A +AKNL+LF+E+GQFGT
Sbjct: 301 LKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQ DPPPKAVKVT+SKR+PL GDEL AYEEEQ R                      
Sbjct: 361 LARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 DN-DTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDF 480
                 DPM+IDAS++  P   GS  G   DI IDGFVPPS+SV+PMFPF+ENTS WDDF
Sbjct: 421 XXAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQS-APHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 540
           GEVINP+DY++K E+MD +  P  G  +D  LDE +A L+LD  PSKV+SNE+TVQVKCS
Sbjct: 481 GEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCS 540

Query: 541 LHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLK 600
           L YMDFEGRSDGRS+KS+++HVAPLKLV                  +  SA  +   K+ 
Sbjct: 541 LAYMDFEGRSDGRSVKSVIAHVAPLKLV-----------------LVHGSAEATEHLKM- 600

Query: 601 KRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYE 660
                     H   + D       +   I+   S +  ++VQLSEKLMSNV+ KKLG++E
Sbjct: 601 ----------HCSKNSDLHVYAPQIEETIDVT-SDLCAYKVQLSEKLMSNVISKKLGEHE 660

Query: 661 ISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALR 720
           I+W+DA+VGKT++  L+LLP S     HKSVLVGDLK+ADFKQFL++KG+QVEFAGGALR
Sbjct: 661 IAWVDAEVGKTDD-KLTLLPPSSTPAAHKSVLVGDLKLADFKQFLANKGLQVEFAGGALR 720

Query: 721 CGEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           CGEY+TLRK+ DA QK G +G+QQ+VIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 CGEYITLRKIGDAGQK-GSTGSQQIVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. Swiss-Prot
Match: sp|Q9V3D6|CPSF2_DROME (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster OX=7227 GN=Cpsf100 PE=1 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 3.5e-135
Identity = 288/806 (35.73%), Postives = 439/806 (54.47%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++  + G  +E+P  Y++ +D    L+DCGW++ FD   ++ L R   T+DAVL+
Sbjct: 1   MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPD  HLGALPY + +LGL+ P+Y+T PV+++G + MYD +++   + +FDLF+LDD+D
Sbjct: 61  SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF+ +T+L Y+Q   L  KG GI I P  AGH++GGT+WKI K G ED++YA DFNH+K
Sbjct: 121 TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           ERHL+G  L+   RP++LITDAYNA   Q  RR +D++    I +T+R NGNVL+ VDTA
Sbjct: 181 ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEES---LNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRN 300
           GRVLEL  +L+  W+ +    + + +  L  V+ + I++ KS +EWMSD + K+FE  RN
Sbjct: 241 GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERG 360
           N F  KH+ L  + +++   P GPKVVLAS   LE+G++ D+FV+WA++A N I+ + R 
Sbjct: 301 NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT 360

Query: 361 QFGTLA-RMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSK 420
             GTLA  +++   P K +++ V +RV L G EL    EE  R + E L   ++K +  +
Sbjct: 361 SPGTLAMELVENCAPGKQIELDVRRRVDLEGAEL----EEYLRTQGEKLNPLIVKPDVEE 420

Query: 421 ASHGTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSA 480
            S     D  +  +I    ++     G H          GF   +     MFP++E    
Sbjct: 421 ESSSESEDDIEMSVITGKHDIVVRPEGRHH--------SGFFKSNKRHHVMFPYHEEKVK 480

Query: 481 WDDFGEVINPDDYVIKD--------------EDMDQSAPHGGVDVDGKLDETAANLILDM 540
            D++GE+IN DDY I D              E++ +  P  G +          ++ L  
Sbjct: 481 CDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLLE 540

Query: 541 KPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILN 600
           KP+K++S   T++V   +  +DFEGRSDG S+  ILS + P +++       +    +  
Sbjct: 541 KPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIH-GTAEGTQVVAR 600

Query: 601 NIALKMSAPMSMPPKLKKRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQL 660
           +    + A +  P K                              I    S I  +QV+L
Sbjct: 601 HCEQNVGARVFTPQK----------------------------GEIIDVTSEIHIYQVRL 660

Query: 661 SEKLMSNVLFKKLGDYEISWLDA-------------------DVGKTENGTLSLLPLSKA 720
           +E L+S + F+K  D E++W+D                    D    E  TL+L  L+  
Sbjct: 661 TEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVEQDASVQEGKTLTLETLADD 720

Query: 721 ALP-HKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDASQKGGGSGTQ 768
            +P H SVL+ +LK++DFKQ L    I  EF+GG L C       +  DA          
Sbjct: 721 EIPIHNSVLINELKLSDFKQTLMRNNINSEFSGGVLWCSNGTLALRRVDAG--------- 756

[Close]
BLAST of Carg15130 vs. Swiss-Prot
Match: sp|Q10568|CPSF2_BOVIN (Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.3e-132
Identity = 287/833 (34.45%), Postives = 438/833 (52.58%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL+  +Y+T PVY++G + MYD + +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  + +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNFPIF---FLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRN 300
           GRVLEL Q+L+  W  +     ++    L  V+ + +++ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F++W  D KN I+ + R 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKA 420
             GTLAR L  +P  K  ++ + KRV L G EL    EE   K+                
Sbjct: 361 TPGTLARFLIDNPSEKVTEIELRKRVKLEGKEL----EEYLEKEXXXXXXXXXXXXXXXX 420

Query: 421 SHGTDNDTGDPMIIDASS--NVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTS 480
                        ID  S      D++    G+ +      F   +    PMFP  E   
Sbjct: 421 XXXXXXXXXXXXXIDQPSAHKTKHDLMMKGEGSRK----GSFFKQAKKSYPMFPAPEERI 480

Query: 481 AWDDFGEVINPDDYVIKD----EDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNE 540
            WD++GE+I P+D+++ +    E+       G  + D  +D+  +++     P+K +S  
Sbjct: 481 KWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTKCISTT 540

Query: 541 LTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAP 600
            ++++K  + Y+D+EGRSDG SIK I++ + P            R L I++         
Sbjct: 541 ESIEIKARVTYIDYEGRSDGDSIKKIINQMKP------------RQLIIVHG-------- 600

Query: 601 MSMPPKLKKRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVL 660
              PP+  +    L  C      +D       +   ++      + +QV+L + L+S++ 
Sbjct: 601 ---PPEASQD---LAECCRAFGGKDIKVYMPKLHETVDATSETHI-YQVRLKDSLVSSLQ 660

Query: 661 FKKLGDYEISW----LDADVGKTENGTL-------------------------------- 720
           F K  D E++W    LD  V K + G +                                
Sbjct: 661 FCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAM 720

Query: 721 -------------------SLLPLSKAALP-HKSVLVGDLKMADFKQFLSSKGIQVEFAG 768
                              +L PL    +P H+SV + + +++DFKQ L  +GIQ EF G
Sbjct: 721 KSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVG 780

[Close]
BLAST of Carg15130 vs. Swiss-Prot
Match: sp|Q9P2I0|CPSF2_HUMAN (Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2)

HSP 1 Score: 474.2 bits (1219), Expect = 2.8e-132
Identity = 285/833 (34.21%), Postives = 436/833 (52.34%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           M + +++T L GV  E+ L YL+ VD F FL+DCGW++HF   ++  L +    IDAVL+
Sbjct: 1   MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPD LHLGALPYA+ +LGL+  +Y+T PVY++G + MYD + +R    +F LFTLDD+D
Sbjct: 61  SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 180
           +AF  + +L +SQ  +L GKG G+ I P  AGH++GGT+WKI KDG E+++YAVDFNH++
Sbjct: 121 AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR 180

Query: 181 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 240
           E HLNG  LE   RP++LITD++NA   QP R+Q+D++    + +TLR +GNVL+ VDTA
Sbjct: 181 EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA 240

Query: 241 GRVLELIQILEWYWEEESLNFPIF---FLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRN 300
           GRVLEL Q+L+  W  +     ++    L  V+ + +++ KS +EWMSD + + FE  RN
Sbjct: 241 GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN 300

Query: 301 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERG 360
           N F  +H++L    S+L   P  PKVVLAS   LE G+S D+F++W  D KN I+ + R 
Sbjct: 301 NPFQFRHLSLCHGLSDLARVP-SPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRT 360

Query: 361 QFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQ--NRKKEEALKASLLKEEQS 420
             GTLAR L  +P  K  ++ + KRV L G EL  Y E++                    
Sbjct: 361 TPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEXXXXXXXXXXXXXXXXXXXX 420

Query: 421 KASHGTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTS 480
                       P       ++     GS  G+        F   +    PMFP  E   
Sbjct: 421 XXXXXXXXXXDQPSAHKTKHDLMMKGEGSRKGS--------FFKQAKKSYPMFPAPEERI 480

Query: 481 AWDDFGEVINPDDYVIKD----EDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNE 540
            WD++GE+I P+D+++ +    E+       G  + D  +D+  +++     P+K +S  
Sbjct: 481 KWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDV-----PTKCISTT 540

Query: 541 LTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAP 600
            ++++K  + Y+D+EGRSDG SIK I++ + P            R L I++         
Sbjct: 541 ESIEIKARVTYIDYEGRSDGDSIKKIINQMKP------------RQLIIVHG-------- 600

Query: 601 MSMPPKLKKRLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVL 660
              PP+  +    L  C      +D       +   ++      + +QV+L + L+S++ 
Sbjct: 601 ---PPEASQD---LAECCRAFGGKDIKVYMPKLHETVDATSETHI-YQVRLKDSLVSSLQ 660

Query: 661 FKKLGDYEISW----LDADVGKTENGTL-------------------------------- 720
           F K  D E++W    LD  V K + G +                                
Sbjct: 661 FCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAM 720

Query: 721 -------------------SLLPLSKAALP-HKSVLVGDLKMADFKQFLSSKGIQVEFAG 768
                              +L PL    +P H+SV + + +++DFKQ L  +GIQ EF G
Sbjct: 721 KSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVG 780

[Close]
BLAST of Carg15130 vs. TrEMBL
Match: tr|A0A0A0LBF9|A0A0A0LBF9_CUCSA (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_3G182220 PE=3 SV=1)

HSP 1 Score: 1332.8 bits (3448), Expect = 0.0e+00
Identity = 678/767 (88.40%), Postives = 700/767 (91.26%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLTGDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSNVAPDV  SHGGAYRDI IDGFVPPST V+PMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHLKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEI+
Sbjct: 601 HCLKNVCPHV-YAPQIEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIT 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDA+VGKTENGTLSLLPLSKA  PHKSVLVGDLKMADFKQFL+SKGIQVEFAGGALRCG
Sbjct: 661 WLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKV+DASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVTDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. TrEMBL
Match: tr|A0A1S3AXY2|A0A1S3AXY2_CUCME (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo OX=3656 GN=LOC103484088 PE=3 SV=1)

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 675/767 (88.01%), Postives = 698/767 (91.00%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SHPDTLHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID
Sbjct: 61  SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQV+TRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQVITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG
Sbjct: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELIQILEWYWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFL
Sbjct: 241 RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNL+LFSERGQFGT
Sbjct: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKVTVSKRVPLTGDEL+AYEEEQNRK  EALKASLLKEEQSKASHG 
Sbjct: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKXXEALKASLLKEEQSKASHGA 420

Query: 421 DNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFG 480
           DNDTGDPMIIDASSN APDV  SHGGAYRDI IDGFVPPSTSV+PMFPFYENTSAWDDFG
Sbjct: 421 DNDTGDPMIIDASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFG 480

Query: 481 EVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540
           EVINPDDYVIKDEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH
Sbjct: 481 EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 541 YMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKKR 600
           YMDFEGRSDGRSIKSILSHVAPLKLV                    +    +   +  K+
Sbjct: 541 YMDFEGRSDGRSIKSILSHVAPLKLV--------------------LVHGTAEATEHLKQ 600

Query: 601 LMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEIS 660
             L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEI+
Sbjct: 601 HCLKNVCPHV-YAPQVEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEIA 660

Query: 661 WLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCG 720
           WLDA+VGKTENGTLSLLPLSKA  PHKSVLVGDLKMADFKQFL+SKGIQVEFAGGALRCG
Sbjct: 661 WLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCG 720

Query: 721 EYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           EYVTLRKV+DASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL
Sbjct: 721 EYVTLRKVTDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 738

[Close]
BLAST of Carg15130 vs. TrEMBL
Match: tr|K7LDR8|K7LDR8_SOYBN (Cleavage and polyadenylation specificity factor subunit 2 OS=Glycine max OX=3847 GN=100777002 PE=3 SV=1)

HSP 1 Score: 1198.3 bits (3099), Expect = 0.0e+00
Identity = 603/768 (78.52%), Postives = 663/768 (86.33%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFL+DCGWNDHFDP+ LQPL+RVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYAMK+LGLSAPVYSTEPVYRLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHH SGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT+L SFVRPAVLITDAYNALNNQPYRRQ DKEFGD ++KTLRA GNVLLPVDT G
Sbjct: 181 RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LN+PI+FLTYVASSTIDY+KSFLEWMSD+IAKSFE TR N FL
Sbjct: 241 RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LK+VTLLINK+ELDNAPDGPKVVLASMASLEAG+SHDIFVEWA D KNL+LF+ERGQF T
Sbjct: 301 LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKV VSKRVPL G+EL+AYEEEQNR K+EALKASL+KEE+ K SHG 
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGA 420

Query: 421 DNDTGDPMIIDASSN-VAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDF 480
           DND  DPM+ID+ +N V P+V G  GG YRDIFIDGFVPPSTSV+P+FP YENTS WDDF
Sbjct: 421 DNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDMDQ+A HGG D++GKLDE AA+LILD KPSKVVS+E TVQV+CSL
Sbjct: 481 GEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKK 600
            YMDFEGRSDGRSIK+ILSHVAPLKLV                    +    +   +  K
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLV--------------------LVHGSAEATEHLK 600

Query: 601 RLMLLLICVHIRYSRDYSFPFQVVISNIETNKSPILEFQVQLSEKLMSNVLFKKLGDYEI 660
           +  L  +C H+ Y+        V         S +  ++VQLSEKLMSNVLFKKLGDYEI
Sbjct: 601 QHCLKHVCPHV-YAPQIEETIDVT--------SDLCAYKVQLSEKLMSNVLFKKLGDYEI 660

Query: 661 SWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRC 720
           +W+DA VGKTEN  LSLLP+S AA PHKSVLVGDLK+AD KQFLSSKG+QVEFAGGALRC
Sbjct: 661 AWVDAVVGKTENDPLSLLPVSGAAPPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRC 720

Query: 721 GEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           GEYVTLRKV DASQKGGGSG QQ+VIEGPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 GEYVTLRKVGDASQKGGGSGAQQIVIEGPLCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Carg15130 vs. TrEMBL
Match: tr|A0A1S3VGU2|A0A1S3VGU2_VIGRR (Cleavage and polyadenylation specificity factor subunit 2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106774814 PE=3 SV=1)

HSP 1 Score: 1185.2 bits (3065), Expect = 0.0e+00
Identity = 597/771 (77.43%), Postives = 660/771 (85.60%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFL+DCGWND FDP+LLQPLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDQFDPSLLQPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYA+KQLGLSAPVYSTEPV+RLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAIKQLGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNNQPYRRQKDKEFGD ++KTLRA GNVLLPVDTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E++N+PI+FLTYVASSTIDY+KSFLEWMSDSIAKSFE TR N FL
Sbjct: 241 RVLELILLLESYWSDENMNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LK+VTLLINK++LDNAP+GPKVVLASMASLEAG+SHDIFVEWA D+KNL+LF+ERGQF T
Sbjct: 301 LKYVTLLINKTDLDNAPEGPKVVLASMASLEAGFSHDIFVEWANDSKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKV VSKRVPL G+EL+AYEEEQ+R K+EALKASL+KEE+ K SHG+
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQDRIKKEALKASLIKEEELKTSHGS 420

Query: 421 DNDTGDPMIIDASSN-VAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDF 480
           DN+  DPM+ID+ +N V P+V G  GG YRDIFIDGFVPPSTSV+PMFP YENTS WDDF
Sbjct: 421 DNNNSDPMVIDSGNNHVPPEVAGPRGGGYRDIFIDGFVPPSTSVAPMFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDM+Q A HGG D++GKLDE AA LILD KPSKVVS+E TVQVKC L
Sbjct: 481 GEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCVL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKK 600
            YMDFEGRSDGRSIK+ILSHVAPLKLV                  +  SA  +       
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLV-----------------LVHGSAEAT------- 600

Query: 601 RLMLLLICVHIRYSRDYSFPFQVVISNIETN---KSPILEFQVQLSEKLMSNVLFKKLGD 660
                    H++               I+      S +  ++VQLSEKLMSNVLFKKLGD
Sbjct: 601 --------EHLKQXXXXXXXXXXXAPQIDETIDVTSDLCAYKVQLSEKLMSNVLFKKLGD 660

Query: 661 YEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGA 720
           YE++W+DA VGKTEN  LSLLP+S+AA PHKSVLVGDLK+AD KQFLS KG+QVEFAGGA
Sbjct: 661 YEVAWVDAVVGKTENDMLSLLPVSEAAPPHKSVLVGDLKLADIKQFLSGKGVQVEFAGGA 720

Query: 721 LRCGEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           LRCGEYVTLRKV DA+QKGGGSG QQ+VIEGPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 LRCGEYVTLRKVGDATQKGGGSGAQQIVIEGPLCEDYYKIRDYLYSQFYLL 739

[Close]
BLAST of Carg15130 vs. TrEMBL
Match: tr|A0A0L9VJ79|A0A0L9VJ79_PHAAN (Cleavage and polyadenylation specificity factor subunit 2 OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g099800 PE=3 SV=1)

HSP 1 Score: 1184.5 bits (3063), Expect = 0.0e+00
Identity = 597/771 (77.43%), Postives = 660/771 (85.60%), Query Frame = 0 

Query: 1   MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60
           MGTSVQVTPLCGVYNENPLSYLVS+DGFNFL+DCGWND FDP+LLQPLSRVASTIDAVL+
Sbjct: 1   MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDQFDPSLLQPLSRVASTIDAVLL 60

Query: 61  SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120
           SH DTLHLGALPYA+KQLGLSAPVYSTEPV+RLGLLTMYDQ+++RKQVSEFDLFTLDDID
Sbjct: 61  SHADTLHLGALPYAIKQLGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 121 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180
           SAFQ VTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121 SAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 181 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240
           RHLNGT L SFVRPAVLITDAYNALNNQPYRRQKDKEFGD ++KTLRA GNVLLPVDTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 241 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 300
           RVLELI +LE YW +E+LN+PI+FLTYVASSTIDY+KSFLEWMSDSIAKSFE TR N FL
Sbjct: 241 RVLELILLLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300

Query: 301 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLILFSERGQFGT 360
           LK+VTLLINK++LDNAP+GPKVVLASMASLEAG+SHDIFVEWA D+KNL+LF+ERGQF T
Sbjct: 301 LKYVTLLINKTDLDNAPEGPKVVLASMASLEAGFSHDIFVEWANDSKNLVLFTERGQFAT 360

Query: 361 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGT 420
           LARMLQADPPPKAVKV VSKRVPL G+EL+AYEEEQ+R K+EALKASL+KEE+ K SHG+
Sbjct: 361 LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQDRIKKEALKASLMKEEELKTSHGS 420

Query: 421 DNDTGDPMIIDASSN-VAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDF 480
           +N+  DPM+ID+ +N V P+V G  GG YRDIFIDGFVPPSTSV+PMFP YENTS WDDF
Sbjct: 421 ENNNSDPMVIDSGNNHVPPEVAGPRGGGYRDIFIDGFVPPSTSVAPMFPCYENTSEWDDF 480

Query: 481 GEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSL 540
           GEVINPDDYVIKDEDM+Q A HGG D++GKLDE AA LILD KPSKVVS+E TVQVKC L
Sbjct: 481 GEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCVL 540

Query: 541 HYMDFEGRSDGRSIKSILSHVAPLKLVWSWCMELQRPLSILNNIALKMSAPMSMPPKLKK 600
            YMDFEGRSDGRSIK+ILSHVAPLKLV                  +  SA  +       
Sbjct: 541 VYMDFEGRSDGRSIKNILSHVAPLKLV-----------------LVHGSAEAT------- 600

Query: 601 RLMLLLICVHIRYSRDYSFPFQVVISNIETN---KSPILEFQVQLSEKLMSNVLFKKLGD 660
                    H++               I+      S +  ++VQLSEKLMSNVLFKKLGD
Sbjct: 601 --------EHLKQXXXXXXXXXXXAPQIDETIDVTSDLCAYKVQLSEKLMSNVLFKKLGD 660

Query: 661 YEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGA 720
           YE++W+DA VGKTEN  LSLLP+S+AA PHKSVLVGDLK+AD KQFLS KG+QVEFAGGA
Sbjct: 661 YEVAWVDAVVGKTENDMLSLLPVSEAAPPHKSVLVGDLKLADIKQFLSGKGVQVEFAGGA 720

Query: 721 LRCGEYVTLRKVSDASQKGGGSGTQQVVIEGPLCEDYYKIRELLYSQFYLL 768
           LRCGEYVTLRKV DA+QKGGGSG QQ+VIEGPLCEDYYKIR+ LYSQFYLL
Sbjct: 721 LRCGEYVTLRKVGDATQKGGGSGAQQIVIEGPLCEDYYKIRDYLYSQFYLL 739

The following BLAST results are available for this feature:
BLAST of Carg15130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922464.10.0e+0091.26cleavage and polyadenylation specificity factor subunit 2 [Cucurbita moschata][more]
XP_022985441.10.0e+0091.26cleavage and polyadenylation specificity factor subunit 2 [Cucurbita maxima][more]
XP_023552428.10.0e+0091.26cleavage and polyadenylation specificity factor subunit 2 [Cucurbita pepo subsp.... [more]
XP_004140773.10.0e+0088.40PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis sa... [more]
XP_008439247.10.0e+0088.01PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Cucumis me... [more]
BLAST of Carg15130 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23880.10.0e+0071.56cleavage and polyadenylation specificity factor 100[more]
AT2G01730.12.0e-3226.05cleavage and polyadenylation specificity factor 73 kDa subunit-II[more]
AT3G07530.15.6e-0628.26Beta-Casp domain (InterPro:IPR022712)[more]
BLAST of Carg15130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LKF9|CPSF2_ARATH0.0e+0071.56Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thalian... [more]
sp|Q652P4|CPSF2_ORYSJ1.2e-28164.76Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp.... [more]
sp|Q9V3D6|CPSF2_DROME3.5e-13535.73Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila... [more]
sp|Q10568|CPSF2_BOVIN1.3e-13234.45Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 ... [more]
sp|Q9P2I0|CPSF2_HUMAN2.8e-13234.21Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=960... [more]
BLAST of Carg15130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBF9|A0A0A0LBF9_CUCSA0.0e+0088.40Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis sativus OX=... [more]
tr|A0A1S3AXY2|A0A1S3AXY2_CUCME0.0e+0088.01Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo OX=365... [more]
tr|K7LDR8|K7LDR8_SOYBN0.0e+0078.52Cleavage and polyadenylation specificity factor subunit 2 OS=Glycine max OX=3847... [more]
tr|A0A1S3VGU2|A0A1S3VGU2_VIGRR0.0e+0077.43Cleavage and polyadenylation specificity factor subunit 2 OS=Vigna radiata var. ... [more]
tr|A0A0L9VJ79|A0A0L9VJ79_PHAAN0.0e+0077.43Cleavage and polyadenylation specificity factor subunit 2 OS=Phaseolus angularis... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006379mRNA cleavage
GO:0006378mRNA polyadenylation
Vocabulary: Cellular Component
TermDefinition
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
Vocabulary: INTERPRO
TermDefinition
IPR035639CPSF2_MBL
IPR027075CPSF2
IPR025069Cpsf2_C
IPR036866RibonucZ/Hydroxyglut_hydro
IPR022712Beta_Casp
IPR001279Metallo-B-lactamas
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006379 mRNA cleavage
biological_process GO:0006378 mRNA polyadenylation
cellular_component GO:0005847 mRNA cleavage and polyadenylation specificity factor complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg15130-RACarg15130-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 392..412
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTORcoord: 5..765
IPR001279Metallo-beta-lactamaseSMARTSM00849Lactamase_B_5acoord: 17..222
e-value: 0.0072
score: 23.5
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 22..194
e-value: 7.1E-55
score: 185.3
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 242..365
e-value: 1.7E-25
score: 100.7
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 242..365
e-value: 8.0E-20
score: 71.0
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3DG3DSA:3.60.15.10coord: 7..254
e-value: 2.1E-76
score: 258.4
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILYSSF56281Metallo-hydrolase/oxidoreductasecoord: 463..567
coord: 5..375
IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalPFAMPF13299CPSF100_Ccoord: 671..764
e-value: 1.0E-18
score: 68.0
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR11203:SF5CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2coord: 5..765
IPR035639CPSF2, metallo-hydrolase domainCDDcd16293CPSF2-like_MBL-foldcoord: 8..203
e-value: 3.18637E-108
score: 330.252

Synteny