Cucsa.107760 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.107760
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	25.3 kDa vesicle transport protein
Location	scaffold00931 : 60992 .. 62848 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGCTAACAATGGTTGGAAGGGTTAGAGATGGATTGCCAATTGCACAAGGAATTAGGTATGTTAATGAAGAGAATGATGATGTTTTTGGGTACAAAAAGCAAGCTGAATTCATACTCAAAGAGATCTCTAGAGGGACTTTGTCACCTCCAAAAATGGTCATTCTAATGCATCATCACTCTTTCATGTACTCCTCTCCCCTTCTCTTTACCTCTTCTTTTGATTAAGTGTTTTTTTTATAGCGTGTTTTATGCTTTTAAATGCAATTTTCATTTCATCATATAATTAAAATCGTTTTAAATCATAAAAAATATGTTTCATAATGATTTTAACCGATTTAGAATCATTCTCATTCACGCCTATCTCTATTTCATTTCATATTTATCCATTGATTGAATGTAAAAGATAATTTACAAAATTTACCTCGAACGTTTGTTGAAAGAGTTTTATATATTTAGATTCATTAACATTAGCTTTGGTTCATTTTAAATAACACAAACGAACATGAATCTTACAAAATCCACCTTAGATTATCAATTTTAAAATTGAAAACTAAGCAACAACATTTTATTTATTTTTGTTTGGTATTTAGTTACTTGGTGGAAAATGGTGTATGCTATATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTATCCATTACTTACAAGATTTGCAAAAAGAGTTTGGGAAGTTTGATGATGCTCTGATAAATAAGCTTATCAAACCCTATAGTTTTCTCAAATTTGGTAACCTTTTCTCAACCCTCTCTTCATCTCCATACATATATATATTAATCTTCTTTCAAAGATGTGTTCACCAAGGAAACATTATTATTATTTCTCCATAAATATGCTGTTTTTCTTTATCTTTTTAAAGAAATGTTTGATGCCCTCAACTCAATAATGAAAAGAAAAGAATATATCAATTACTACTTTAATTTGTAATAACTTAATCTATATATATATCTATATATGGTTGTTATATTCTCCTTTTTCACCCTACTTTACTTCCTTTCAAAGAAAGGTCCTACTTTCTATTAGTATTTTAAATAATCCAAAATTAATGTTATTTATATATAATAATGTATTTGGAAATTATTCAAAGACTAATAAATTAATAATTAAGACATTGATATATTTTGTAGACAGTATTATTAGCAATGTTAGAAAACAATATATCGATACAAGAACACAAGCCAATCTTAGCAAGCTCAATGCAAATCGTCGTCAACCTGATCCAGATATTCTCACTTGTTCGCTTTCTGAAATTTTAGAGAGGAGGAGAAAATTCGGTAACTATTTTTAATTAAATTTCTTATAATAAGTAAATAACCACATGTACTTGAACCTAAAGTTTGAAATTTAAGGGATAATTTCATATGATTATCATTTGATTAATAATGTTAATATAAATTATATTAAGATTATGGTTATGTTAATAATTAATAATTCAGATATGGTGGAAAGATCAAGGAGTAATAATAATACAAATTCTGAAGGTAATTCCTGCTCCATTTGGGGGTCTCCCTATCTTGAGGTAAGTTATTGAAGTTAGTTTGCTTTTATTTTAATTATTGATAATTAATTAAAATAAAGTATATATAAAGCATCAAATAATTAAGCTTAATTGTATTAATTATTTTTCTTTATGTGTGTGTATATGGTCAGGAAATTGGTGTGAAATGGACGCCAATGGTGGTAACTTTTGGCGTAGTGCTTATCGTTCTATGGGCTTCCTTTCTTCTATTCGACGTCTCATTATCTCATCATAATCAATTTGTAATTTTATATAACAACAGAAAATTGTTTCCCTAATTTTGTTTAATATTTCTTTTCTTCCCATACAC

mRNA sequence

ATGGTGAAGCTAACAATGGTTGGAAGGGTTAGAGATGGATTGCCAATTGCACAAGGAATTAGGTATGTTAATGAAGAGAATGATGATGTTTTTGGGTACAAAAAGCAAGCTGAATTCATACTCAAAGAGATCTCTAGAGGGACTTTGTCACCTCCAAAAATGGTCATTCTAATGCATCATCACTCTTTCATTTACTTGGTGGAAAATGGTGTATGCTATATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTATCCATTACTTACAAGATTTGCAAAAAGAGTTTGGGAAGTTTGATGATGCTCTGATAAATAAGCTTATCAAACCCTATAGTTTTCTCAAATTTGATATGGTGGAAAGATCAAGGAGTAATAATAATACAAATTCTGAAGGTAATTCCTGCTCCATTTGGGGGTCTCCCTATCTTGAGGAAATTGGTGTGAAATGGACGCCAATGGTGGTAACTTTTGGCGTAGTGCTTATCGTTCTATGGGCTTCCTTTCTTCTATTCGACGTCTCATTATCTCATCATAATCAATTTGTAATTTTATATAACAACAGAAAATTGTTTCCCTAATTTTGTTTAATATTTCTTTTCTTCCCATACAC

Coding sequence (CDS)

ATGGTGAAGCTAACAATGGTTGGAAGGGTTAGAGATGGATTGCCAATTGCACAAGGAATTAGGTATGTTAATGAAGAGAATGATGATGTTTTTGGGTACAAAAAGCAAGCTGAATTCATACTCAAAGAGATCTCTAGAGGGACTTTGTCACCTCCAAAAATGGTCATTCTAATGCATCATCACTCTTTCATTTACTTGGTGGAAAATGGTGTATGCTATATGACATTGTGCGATTCTTCATACCCAAGAAAGCTGGCTATCCATTACTTACAAGATTTGCAAAAAGAGTTTGGGAAGTTTGATGATGCTCTGATAAATAAGCTTATCAAACCCTATAGTTTTCTCAAATTTGATATGGTGGAAAGATCAAGGAGTAATAATAATACAAATTCTGAAGGTAATTCCTGCTCCATTTGGGGGTCTCCCTATCTTGAGGAAATTGGTGTGAAATGGACGCCAATGGTGGTAACTTTTGGCGTAGTGCTTATCGTTCTATGGGCTTCCTTTCTTCTATTCGACGTCTCATTATCTCATCATAATCAATTTGTAATTTTATATAACAACAGAAAATTGTTTCCCTAA

Protein sequence

MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHHHSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDMVERSRSNNNTNSEGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDVSLSHHNQFVILYNNRKLFP*

Homology

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BLAST of Cucsa.107760 vs. Swiss-Prot
Match: SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 79/216 (36.57%), Postives = 123/216 (56.94%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVK+T++ RV DGLP+A+G+    +  D    YK+Q + + K +SRG     +M +    
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGP 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           + F Y++E  VCY+T+CD SYP+KLA  YL+DL+ EF + +   I    +PY+F+KFD+ 
Sbjct: 61  YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTF 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           I   +K Y DTRTQ N++KLN    +    I+T ++ E+L    K D V  S  ++   S
Sbjct: 121 IQKTKKLYQDTRTQRNIAKLNDELYEVH-QIMTRNVQEVLGVGEKLDQV--SEMSSRLTS 180

Query: 181 EGNSCSIWGSPYLEEIGV-KWTPMVVTFGVVLIVLW 216
           E    +        +  + KW P+ + FGVV ++ W
Sbjct: 181 ESRIYADKAKDLNRQALIRKWAPVAIVFGVVFLLFW 212

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BLAST of Cucsa.107760 vs. Swiss-Prot
Match: S22BB_DANRE (Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 62/181 (34.25%), Postives = 107/181 (59.12%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MV LTM+ R+ DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP +  +    
Sbjct: 1   MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLNEQ--SPNRCTLEAGS 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
            SF Y++E GVCY+ LC++ +P+KLA  YL+DLQ EF +     +  + +PYSF++FD+ 
Sbjct: 61  MSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTY 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           I   +K YID+R + NLS +N    Q    I+  ++ E+L+R      ++   SN ++ S
Sbjct: 121 IQKTKKSYIDSRARRNLSNIN-TELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLS 178

Query: 181 E 182
           +
Sbjct: 181 K 178

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BLAST of Cucsa.107760 vs. Swiss-Prot
Match: SC22B_CHICK (Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-26
Identity = 61/176 (34.66%), Postives = 106/176 (60.23%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MV LTM+ RV DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP +  +    
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQ--SPTRCTLEAGA 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
            +F Y++E GVCY+ LC++++P+KLA  YL+DLQ EF +     +  + +PYSF++FD+ 
Sbjct: 61  MAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTY 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNN 177
           I   +K YID+R + NL  +N    Q    I+  ++ E+L+R      ++ S++NN
Sbjct: 121 IQKTKKLYIDSRARRNLGSIN-TELQDVQRIMVANIEEVLQRGEALSALD-SKANN 172

[Close]

BLAST of Cucsa.107760 vs. Swiss-Prot
Match: SC22B_XENTR (Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-26
Identity = 63/181 (34.81%), Postives = 106/181 (58.56%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MV LTM+ RV DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP +  +    
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLNEQ--SPTRCTLEAGA 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
            +F YL+E GVCY+ LC++++P+KLA  YL+DL  EF +     +  + +PYSF++FD+ 
Sbjct: 61  MTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNY 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           I   +K YID+R + NLS +N    Q    I+  ++ E+L R      ++   SN +T S
Sbjct: 121 IQKTKKSYIDSRARRNLSSVN-TELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLS 178

Query: 181 E 182
           +
Sbjct: 181 K 178

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BLAST of Cucsa.107760 vs. Swiss-Prot
Match: SC22B_RAT (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 60/176 (34.09%), Postives = 105/176 (59.66%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MV LTM+ RV DGLP+A  ++   +   D+  Y+ QA+ + ++++    SP +  +    
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNEQ--SPTRCTLEAGA 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
            +F Y++E GVCY+ LC++++P+KLA  YL+DL  EF +     +  + +PYSF++FD+ 
Sbjct: 61  MTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTF 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNN 177
           I   +K YID+R + NL  +N    Q    I+  ++ E+L+R      ++ S++NN
Sbjct: 121 IQKTKKLYIDSRARRNLGSIN-TELQDVQRIMVANIEEVLQRGEALSALD-SKANN 172

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BLAST of Cucsa.107760 vs. TrEMBL
Match: A0A0A0LBE2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182070 PE=3 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 2.2e-135
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           ISNVRKQYIDTRTQANLSKLNANRRQPDPDI TCSLSEILERRRKFDMVERSRSNNNTNS
Sbjct: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNS 180

Query: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDVSLSHHNQFVILYNNRKL 240
           EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFD+SLSHHNQFVILYNNRKL
Sbjct: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKL 240

Query: 241 FP 243
           FP
Sbjct: 241 FP 242

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BLAST of Cucsa.107760 vs. TrEMBL
Match: A0A061G838_THECC (SNARE superfamily protein OS=Theobroma cacao GN=TCM_015158 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.6e-70
Identity = 137/222 (61.71%), Postives = 167/222 (75.23%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLT+VGRV DGLP+AQG RYVN END+   YK+Q EFI+KEISRG L P KM I + H
Sbjct: 1   MVKLTIVGRVNDGLPLAQGARYVNTENDNFSYYKQQGEFIIKEISRGALPPSKMTIRVDH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSF YLV NG+C++TLCDSSYPRKLA HYLQDLQKEF KFD +LI K+ +PYSF++FD I
Sbjct: 61  HSFNYLVVNGICFITLCDSSYPRKLAFHYLQDLQKEFDKFDHSLIGKITRPYSFIRFDGI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           I+NVRKQYIDTRTQANLSKLNANRRQ + DI+T ++S+I+ERRR   + E   +      
Sbjct: 121 IANVRKQYIDTRTQANLSKLNANRRQ-ELDIITENVSDIIERRRNSGIFETPATPR---- 180

Query: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFD 223
              S  +WGSP LE I + WTP+ +   V  ++LW S +L D
Sbjct: 181 --TSSQVWGSPRLEAITLIWTPIAIIAVVASVLLWVSLILTD 215

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BLAST of Cucsa.107760 vs. TrEMBL
Match: B9I498_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13250g PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.4e-68
Identity = 132/222 (59.46%), Postives = 167/222 (75.23%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVK+T+VGRV DGLP+AQG RYVNEEND+   YK+Q EFILKEISRG L P  M I + H
Sbjct: 1   MVKITIVGRVIDGLPLAQGPRYVNEENDNFLCYKQQGEFILKEISRGALIPSMMTIRIDH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HS  YL+ NG C+MTLCDSSYPRKLA HYLQDLQKEF + D++L+ K+ +PYSF+KFD +
Sbjct: 61  HSLNYLIGNGACFMTLCDSSYPRKLAFHYLQDLQKEFERLDNSLVEKITRPYSFVKFDGV 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           I ++RKQYIDTRTQANLSKLNANR++ D +I+T  +SEIL+R+R  ++ ER  +     +
Sbjct: 121 IGSIRKQYIDTRTQANLSKLNANRKK-DLEIITEHISEILQRKRNSEISERLPA----TT 180

Query: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFD 223
              +  +WGSP LE I +KWTP+     V  I+LWAS +L D
Sbjct: 181 PRTASPVWGSPLLEVIALKWTPITTIVAVAAILLWASLVLTD 217

[Close]

BLAST of Cucsa.107760 vs. TrEMBL
Match: A0A067EY39_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027525mg PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.5e-67
Identity = 134/223 (60.09%), Postives = 172/223 (77.13%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVK+T+VGRV DGLP+A+G RY+N+E+D    YK+QAEFILKEISRG L+P KM I + H
Sbjct: 1   MVKMTIVGRVSDGLPLARGPRYLNQEHDSFSFYKQQAEFILKEISRGALAPSKMTIRVDH 60

Query: 61  HSFIYLVENGV-CYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDS 120
           HSF YL+ENG+ C++TLCDSSYPRKLA HYLQDLQKEF KFD +LI+K+ +PYS +KF+S
Sbjct: 61  HSFHYLMENGIGCFITLCDSSYPRKLAFHYLQDLQKEFQKFDISLIDKITRPYSCVKFES 120

Query: 121 IISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTN 180
           II N+RKQY+DTRTQANLSKLNANR Q D DI+   + +I+ER+R+ ++ E       T 
Sbjct: 121 IIGNIRKQYVDTRTQANLSKLNANRGQ-DLDIVIEHMYQIVERKRQSEISEEIL----TA 180

Query: 181 SEGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFD 223
           +  +  SIWGSP LE I +KWTP+ +   V  I+LWA+ +L D
Sbjct: 181 TRKHVSSIWGSPRLEVIALKWTPIAIIVAVAAILLWANLVLTD 218

[Close]

BLAST of Cucsa.107760 vs. TrEMBL
Match: V4SDW0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005834mg PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-66
Identity = 133/223 (59.64%), Postives = 171/223 (76.68%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVK+T+VGRV DGLP+A+G RY+N+E+D    YK+QAEFILKEISRG L+P KM I + H
Sbjct: 1   MVKMTIVGRVSDGLPLARGPRYLNQEHDSFSFYKQQAEFILKEISRGALAPSKMTIRVDH 60

Query: 61  HSFIYLVENGV-CYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDS 120
           HSF YL+ENG+ C++TLCDSSYPRKL  HYLQDLQKEF KFD +LI+K+ +PYS +KF+S
Sbjct: 61  HSFHYLMENGIGCFITLCDSSYPRKLVFHYLQDLQKEFQKFDISLIDKITRPYSCVKFES 120

Query: 121 IISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTN 180
           II N+RKQY+DTRTQANLSKLNANR Q D DI+   + +I+ER+R+ ++ E       T 
Sbjct: 121 IIGNIRKQYVDTRTQANLSKLNANRGQ-DLDIVIEHMYQIVERKRQSEISEEIL----TA 180

Query: 181 SEGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFD 223
           +  +  SIWGSP LE I +KWTP+ +   V  I+LWA+ +L D
Sbjct: 181 TRKHVSSIWGSPRLEVIALKWTPIAIIVAVAAILLWANLVLTD 218

[Close]

BLAST of Cucsa.107760 vs. TAIR10
Match: AT5G52270.1 (AT5G52270.1 SNARE-like superfamily protein)

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48
Identity = 99/174 (56.90%), Postives = 133/174 (76.44%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFG-YKKQAEFILKEISRGTLSPPKMVILMH 60
           MVKLT+VGRV DGLP+AQ   YVN+E++  F  YK+QAEF+LK++S+ +L  PKM IL+ 
Sbjct: 1   MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD 60

Query: 61  HHSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDD-ALINKLIKPYSFLKFD 120
           HHSF +LVE  +CY+ L DSSYPRKL  +YLQ+L KE  K D+ ALI K+ KPYSF++F 
Sbjct: 61  HHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRFG 120

Query: 121 SIISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERS 173
            II  +RKQYIDTRTQANLSKLNA R+Q + D++T  L++I++R++   ++  S
Sbjct: 121 KIIGRIRKQYIDTRTQANLSKLNALRKQ-ELDVVTEHLNDIIQRQQILGVLRSS 173

[Close]

BLAST of Cucsa.107760 vs. TAIR10
Match: AT1G11890.1 (AT1G11890.1 Synaptobrevin family protein)

HSP 1 Score: 144.8 bits (364), Expect = 6.9e-35
Identity = 79/216 (36.57%), Postives = 123/216 (56.94%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVK+T++ RV DGLP+A+G+    +  D    YK+Q + + K +SRG     +M +    
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVETGP 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           + F Y++E  VCY+T+CD SYP+KLA  YL+DL+ EF + +   I    +PY+F+KFD+ 
Sbjct: 61  YVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTF 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           I   +K Y DTRTQ N++KLN    +    I+T ++ E+L    K D V  S  ++   S
Sbjct: 121 IQKTKKLYQDTRTQRNIAKLNDELYEVH-QIMTRNVQEVLGVGEKLDQV--SEMSSRLTS 180

Query: 181 EGNSCSIWGSPYLEEIGV-KWTPMVVTFGVVLIVLW 216
           E    +        +  + KW P+ + FGVV ++ W
Sbjct: 181 ESRIYADKAKDLNRQALIRKWAPVAIVFGVVFLLFW 212

[Close]

BLAST of Cucsa.107760 vs. NCBI nr
Match: gi|778679566|ref|XP_011651150.1| (PREDICTED: 25.3 kDa vesicle transport protein isoform X2 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 3.2e-135
Identity = 240/242 (99.17%), Postives = 241/242 (99.59%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           ISNVRKQYIDTRTQANLSKLNANRRQPDPDI TCSLSEILERRRKFDMVERSRSNNNTNS
Sbjct: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNS 180

Query: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDVSLSHHNQFVILYNNRKL 240
           EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFD+SLSHHNQFVILYNNRKL
Sbjct: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKL 240

Query: 241 FP 243
           FP
Sbjct: 241 FP 242

[Close]

BLAST of Cucsa.107760 vs. NCBI nr
Match: gi|778679563|ref|XP_011651149.1| (PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus])

HSP 1 Score: 483.4 bits (1243), Expect = 2.3e-133
Identity = 240/247 (97.17%), Postives = 241/247 (97.57%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           ISNVRKQYIDTRTQANLSKLNANRRQPDPDI TCSLSEILERRRKFDMVERSRSNNNTNS
Sbjct: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNS 180

Query: 181 EGNSCSIWGSPYLE-----EIGVKWTPMVVTFGVVLIVLWASFLLFDVSLSHHNQFVILY 240
           EGNSCSIWGSPYLE     EIGVKWTPMVVTFGVVLIVLWASFLLFD+SLSHHNQFVILY
Sbjct: 181 EGNSCSIWGSPYLECVYGQEIGVKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILY 240

Query: 241 NNRKLFP 243
           NNRKLFP
Sbjct: 241 NNRKLFP 247

[Close]

BLAST of Cucsa.107760 vs. NCBI nr
Match: gi|659077470|ref|XP_008439222.1| (PREDICTED: 25.3 kDa vesicle transport protein isoform X2 [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 7.9e-126
Identity = 226/242 (93.39%), Postives = 232/242 (95.87%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           ISNVRKQYIDTRTQ NL KLNANRRQPDPDIL+CS SEILERRRK D+ ERSR   NTNS
Sbjct: 121 ISNVRKQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRC--NTNS 180

Query: 181 EGNSCSIWGSPYLEEIGVKWTPMVVTFGVVLIVLWASFLLFDVSLSHHNQFVILYNNRKL 240
           +G S SIWGSPYLEEIG+KWTPMVVTFGVVLIVLWASFLLFD+SLSHHNQFVILYNNRKL
Sbjct: 181 QGTSSSIWGSPYLEEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILYNNRKL 240

Query: 241 FP 243
           FP
Sbjct: 241 FP 240

[Close]

BLAST of Cucsa.107760 vs. NCBI nr
Match: gi|659077468|ref|XP_008439221.1| (PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo])

HSP 1 Score: 452.2 bits (1162), Expect = 5.7e-124
Identity = 226/247 (91.50%), Postives = 232/247 (93.93%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSFIYLVENGVCYMTLCDSSYPRKLA+HYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           ISNVRKQYIDTRTQ NL KLNANRRQPDPDIL+CS SEILERRRK D+ ERSR   NTNS
Sbjct: 121 ISNVRKQYIDTRTQVNLCKLNANRRQPDPDILSCSFSEILERRRKLDIEERSRC--NTNS 180

Query: 181 EGNSCSIWGSPYLE-----EIGVKWTPMVVTFGVVLIVLWASFLLFDVSLSHHNQFVILY 240
           +G S SIWGSPYLE     EIG+KWTPMVVTFGVVLIVLWASFLLFD+SLSHHNQFVILY
Sbjct: 181 QGTSSSIWGSPYLECIYGQEIGLKWTPMVVTFGVVLIVLWASFLLFDISLSHHNQFVILY 240

Query: 241 NNRKLFP 243
           NNRKLFP
Sbjct: 241 NNRKLFP 245

[Close]

BLAST of Cucsa.107760 vs. NCBI nr
Match: gi|778679569|ref|XP_011651151.1| (PREDICTED: 25.3 kDa vesicle transport protein isoform X3 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 5.3e-106
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 1


Query: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60
           MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120
           HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI
Sbjct: 61  HSFIYLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKPYSFLKFDSI 120

Query: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDILTCSLSEILERRRKFDMVERSRSNNNTNS 180
           ISNVRKQYIDTRTQANLSKLNANRRQPDPDI TCSLSEILERRRKFDMVERSRSNNNTNS
Sbjct: 121 ISNVRKQYIDTRTQANLSKLNANRRQPDPDISTCSLSEILERRRKFDMVERSRSNNNTNS 180

Query: 181 EGNSCSIWGSPYLE 195
           EGNSCSIWGSPYLE
Sbjct: 181 EGNSCSIWGSPYLE 194

The following BLAST results are available for this feature:

BLAST of Cucsa.107760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SEC22_ARATH	1.2e-33	36.57	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1	[more]
S22BB_DANRE	3.2e-26	34.25	Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2 SV=1	[more]
SC22B_CHICK	5.5e-26	34.66	Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2 SV=1	[more]
SC22B_XENTR	5.5e-26	34.81	Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b PE=2 SV=1	[more]
SC22B_RAT	1.6e-25	34.09	Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3	[more]

BLAST of Cucsa.107760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBE2_CUCSA	2.2e-135	99.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G182070 PE=3 SV=1	[more]
A0A061G838_THECC	5.6e-70	61.71	SNARE superfamily protein OS=Theobroma cacao GN=TCM_015158 PE=3 SV=1	[more]
B9I498_POPTR	2.4e-68	59.46	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s13250g PE=3 SV=1	[more]
A0A067EY39_CITSI	4.5e-67	60.09	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027525mg PE=3 SV=1	[more]
V4SDW0_9ROSI	1.3e-66	59.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005834mg PE=3 SV=1	[more]

BLAST of Cucsa.107760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52270.1	1.1e-48	56.90	SNARE-like superfamily protein	[more]
AT1G11890.1	6.9e-35	36.57	Synaptobrevin family protein	[more]

BLAST of Cucsa.107760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679566\|ref\|XP_011651150.1\|	3.2e-135	99.17	PREDICTED: 25.3 kDa vesicle transport protein isoform X2 [Cucumis sativus]	[more]
gi\|778679563\|ref\|XP_011651149.1\|	2.3e-133	97.17	PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis sativus]	[more]
gi\|659077470\|ref\|XP_008439222.1\|	7.9e-126	93.39	PREDICTED: 25.3 kDa vesicle transport protein isoform X2 [Cucumis melo]	[more]
gi\|659077468\|ref\|XP_008439221.1\|	5.7e-124	91.50	PREDICTED: 25.3 kDa vesicle transport protein isoform X1 [Cucumis melo]	[more]
gi\|778679569\|ref\|XP_011651151.1\|	5.3e-106	99.48	PREDICTED: 25.3 kDa vesicle transport protein isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010908	Longin_dom
IPR011012	Longin-like_dom_sf
IPR010908	Longin_dom
IPR011012	Longin-like_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0006810	transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.107760.2	Cucsa.107760.2	mRNA
Cucsa.107760.1	Cucsa.107760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010908	Longin domain	GENE3D	G3DSA:3.30.450.50		coord: 1..119 score: 3.6
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 37..118 score: 3.9
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 40..120 score: 3.6
IPR010908	Longin domain	PROFILE	PS50859	LONGIN	coord: 6..121 score: 21
IPR011012	Longin-like domain	unknown	SSF64356	SNARE-like	coord: 1..119 score: 5.04
None	No IPR available	PANTHER	PTHR21136	SNARE PROTEINS	coord: 1..120 score: 1.5
None	No IPR available	PANTHER	PTHR21136:SF97	SNARE-LIKE SUPERFAMILY PROTEIN	coord: 1..120 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.107760	Cla006182	Watermelon (97103) v1	cgywmB152
Cucsa.107760	Csa3G182070	Cucumber (Chinese Long) v2	cgycuB132
Cucsa.107760	ClCG05G008020	Watermelon (Charleston Gray)	cgywcgB152
Cucsa.107760	CSPI03G16900	Wild cucumber (PI 183967)	cgycpiB133
Cucsa.107760	CmaCh18G012440	Cucurbita maxima (Rimu)	cgycmaB0249
Cucsa.107760	CmoCh18G012670	Cucurbita moschata (Rifu)	cgycmoB0248
Cucsa.107760	Cp4.1LG09g00880	Cucurbita pepo (Zucchini)	cgycpeB0240
Cucsa.107760	MELO3C031642.2	Melon (DHL92) v3.6.1	cgymedB142
Cucsa.107760	CsaV3_3G017070	Cucumber (Chinese Long) v3	cgycucB137
Cucsa.107760	Cla97C05G090060	Watermelon (97103) v2	cgywmbB147
Cucsa.107760	Bhi01G000964	Wax gourd	cgywgoB170
Cucsa.107760	Carg22097	Silver-seed gourd	carcgyB0828

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.107760	Cucurbita maxima (Rimu)	cgycmaB0248
Cucsa.107760	Cucurbita maxima (Rimu)	cgycmaB0251
Cucsa.107760	Cucurbita moschata (Rifu)	cgycmoB0247
Cucsa.107760	Cucurbita moschata (Rifu)	cgycmoB0250
Cucsa.107760	Melon (DHL92) v3.5.1	cgymeB142
Cucsa.107760	Cucurbita pepo (Zucchini)	cgycpeB0241
Cucsa.107760	Bottle gourd (USVL1VR-Ls)	cgylsiB143
Cucsa.107760	Silver-seed gourd	carcgyB0794
Cucsa.107760	Silver-seed gourd	carcgyB1105