Cucsa.106150 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.106150
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRING/U-box superfamily protein, putative
Locationscaffold00929 : 558019 .. 558662 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTGTGTGAGATTTGTCTGGAGAACAAAGAAGAGGGAAACATGTTCGAAATCAATACGTGTTTACACTCATTTTGCCGTGATTGTGTAATCAAACACGTCTCTACGAAGATCGAAAATGGATATTCCTCCGTTTCTTGTCTTGCTTTGAACTGTCCTTCCATTATAGATTTTCACTCTTGCTGGTAACTATAAGTAAATTTAGGGTTTAAGAAAGTTGAAGGGTTGGCGTAGAAATGACATATGGATCAATTACTTTACTTTGCAGGAGAATGCTACCGAAGGAAATAGGTGAGAAATGGAACAAAGCACTTTGCGAAGTGCTTTATTCGACAGAAGAGAAAGTGGTTTGCCCATTCAAGGATTGCTCCGTGGGAATAACCCTTGAGAGGGGCGCAAGCATAAGGGACTGTGAGTGTCCGCTTTGCCATAGACTCTTTTGCGCGACATGTGAAGTCCCATGGCACGATGGTGTCACCTGCGAGGAATATAAGAGACTGTATAAAAATGAAGAAGGTAGAAATGAGATTTTGATGAAGAAATTAGCTTCTCAAATGAAATGGATGAAATGTCCCAAATGCAATTTCTTCGTTGAGAAGATTTATGGTTGTTTGCATATCACTTGCAGGTTCATTAATTTCTAA

mRNA sequence

AAGTTGTGTGAGATTTGTCTGGAGAACAAAGAAGAGGGAAACATGTTCGAAATCAATACGTGTTTACACTCATTTTGCCGTGATTGTGTAATCAAACACGTCTCTACGAAGATCGAAAATGGATATTCCTCCGTTTCTTGTCTTGCTTTGAACTGTCCTTCCATTATAGATTTTCACTCTTGCTGGAGAATGCTACCGAAGGAAATAGGTGAGAAATGGAACAAAGCACTTTGCGAAGTGCTTTATTCGACAGAAGAGAAAGTGGTTTGCCCATTCAAGGATTGCTCCGTGGGAATAACCCTTGAGAGGGGCGCAAGCATAAGGGACTGTGAGTGTCCGCTTTGCCATAGACTCTTTTGCGCGACATGTGAAGTCCCATGGCACGATGGTGTCACCTGCGAGGAATATAAGAGACTGTATAAAAATGAAGAAGGTAGAAATGAGATTTTGATGAAGAAATTAGCTTCTCAAATGAAATGGATGAAATGTCCCAAATGCAATTTCTTCGTTGAGAAGATTTATGGTTGTTTGCATATCACTTGCAGGTTCATTAATTTCTAA

Coding sequence (CDS)

AAGTTGTGTGAGATTTGTCTGGAGAACAAAGAAGAGGGAAACATGTTCGAAATCAATACGTGTTTACACTCATTTTGCCGTGATTGTGTAATCAAACACGTCTCTACGAAGATCGAAAATGGATATTCCTCCGTTTCTTGTCTTGCTTTGAACTGTCCTTCCATTATAGATTTTCACTCTTGCTGGAGAATGCTACCGAAGGAAATAGGTGAGAAATGGAACAAAGCACTTTGCGAAGTGCTTTATTCGACAGAAGAGAAAGTGGTTTGCCCATTCAAGGATTGCTCCGTGGGAATAACCCTTGAGAGGGGCGCAAGCATAAGGGACTGTGAGTGTCCGCTTTGCCATAGACTCTTTTGCGCGACATGTGAAGTCCCATGGCACGATGGTGTCACCTGCGAGGAATATAAGAGACTGTATAAAAATGAAGAAGGTAGAAATGAGATTTTGATGAAGAAATTAGCTTCTCAAATGAAATGGATGAAATGTCCCAAATGCAATTTCTTCGTTGAGAAGATTTATGGTTGTTTGCATATCACTTGCAGGTTCATTAATTTCTAA

Protein sequence

KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHITCRFINF*
Homology
[Close]
BLAST of Cucsa.106150 vs. Swiss-Prot
Match: RN217_MOUSE (Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus GN=Rnf217 PE=3 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 52/196 (26.53%), Postives = 88/196 (44.90%), Query Frame = 1 

Query: 2   LCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 61
           +C +CLE+K    +  +  C  + C +C+  ++S++++ G   + C    C   ++  + 
Sbjct: 235 MCRVCLEDKP---IKPLPCCKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETTV 294

Query: 62  WRMLPKEIGEKWNKALCEVLYSTEEKVVCP-------FKDCSVGITLERGASIRDCECPL 121
              L  E   K+ K   E+         CP       FK      T  R  S    +CP 
Sbjct: 295 VYNLTHEDSIKY-KYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESRYKIQCPT 354

Query: 122 CHRLFCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKW-----MKCPKCNFF 181
           C  ++C  C  PWH+GV C+EYK        + + L++  AS+++       KCPKC   
Sbjct: 355 CQLIWCFKCHSPWHEGVNCKEYK--------KGDKLLRHWASEIEHGQRNAQKCPKCKIH 414

Query: 182 VEKIYGCLHITCRFIN 186
           +++  GC H+TC   N
Sbjct: 415 IQRTEGCDHMTCSQCN 418

[Close]
BLAST of Cucsa.106150 vs. Swiss-Prot
Match: RN217_XENLA (Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.6e-15
Identity = 52/193 (26.94%), Postives = 86/193 (44.56%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCW 62
           C +CLE++   ++  +  C    C +C+ +++S++++ G + + C    C   +D  +  
Sbjct: 3   CRVCLEDR---SIKPLPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDESTIL 62

Query: 63  RMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRD---------CECP 122
             LP +   K+ K   E+         CP   C    T +R   I +          +CP
Sbjct: 63  YSLPHDDIIKY-KYFLELSRMDSSTKPCP--QCKHFTTFKRKTHIPNPTKSENKLKIQCP 122

Query: 123 LCHRLFCATCEVPWHDGVTCEEYKRLYK-NEEGRNEILMKKLASQMKWMKCPKCNFFVEK 182
            C  ++C  C  PWH+GV C EYK+  K      NEI       Q    KCP+C   +++
Sbjct: 123 SCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEI----EHGQRNAQKCPRCKVHIQR 182

Query: 183 IYGCLHITCRFIN 186
             GC H+TC   N
Sbjct: 183 TEGCDHMTCSQCN 185

[Close]
BLAST of Cucsa.106150 vs. Swiss-Prot
Match: RN217_HUMAN (Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens GN=RNF217 PE=2 SV=4)

HSP 1 Score: 82.8 bits (203), Expect = 4.4e-15
Identity = 52/196 (26.53%), Postives = 87/196 (44.39%), Query Frame = 1 

Query: 2   LCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 61
           +C +CLE+K    +  +  C  + C +C+  ++S +++ G   + C    C   ++  + 
Sbjct: 262 MCRVCLEDKP---IKPLPCCKKAVCEECLKVYLSAQVQLGQVEIKCPITECFEFLEETTV 321

Query: 62  WRMLPKEIGEKWNKALCEVLYSTEEKVVCP-------FKDCSVGITLERGASIRDCECPL 121
              L  E   K+ K   E+         CP       FK      T  R  S    +CP 
Sbjct: 322 VYNLTHEDSIKY-KYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESKYKIQCPT 381

Query: 122 CHRLFCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKW-----MKCPKCNFF 181
           C  ++C  C  PWH+GV C+EYK        + + L++  AS+++       KCPKC   
Sbjct: 382 CQFVWCFKCHSPWHEGVNCKEYK--------KGDKLLRHWASEIEHGQRNAQKCPKCKIH 441

Query: 182 VEKIYGCLHITCRFIN 186
           +++  GC H+TC   N
Sbjct: 442 IQRTEGCDHMTCSQCN 445

[Close]
BLAST of Cucsa.106150 vs. Swiss-Prot
Match: DEAHC_ARATH (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 50/184 (27.17%), Postives = 84/184 (45.65%), Query Frame = 1 

Query: 3    CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYS-SVSCLALNCPSIIDFHSC 62
            C ICL   ++G  + +  C H FC+ C+++     + N  +  + C  ++C + I     
Sbjct: 1564 CPICLSEVDDG--YSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADM 1623

Query: 63   WRMLPKE-IGEKWNKALCEVLYSTEEKV-VCPFKDC-SVGITLERGASIRDCECPLCHRL 122
              +L +E + E ++ +L   + S++ K   C   DC SV        S     C  CH  
Sbjct: 1624 RALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACHSE 1683

Query: 123  FCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLH 182
             C  C + +H  +TCE YK+  +N     ++ +K  A      +CP C   +EK  GC H
Sbjct: 1684 ICTRCHLEYHPLITCERYKKFKENP----DLSLKDWAKGKNVKECPICKSTIEKTDGCNH 1741

[Close]
BLAST of Cucsa.106150 vs. Swiss-Prot
Match: ARI3_ARATH (Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana GN=ARI3 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-13
Identity = 53/189 (28.04%), Postives = 85/189 (44.97%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSS-VSCLALNCPSIIDFHSC 62
           C++C+E+    N+     C H FC DC I H + KI  G S  + C+A  C +I D    
Sbjct: 121 CDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAICDEDVV 180

Query: 63  WRMLPKEIGEKWNKALCEVLYSTEEKVV-CPFK-DCSVGI-TLERGASIRDCECPLCHRL 122
            +++  E+ +++++ L E        V  CP K  C   I  +E G  + +  C  C   
Sbjct: 181 RKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVGCS-CGLQ 240

Query: 123 FCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMK-----CPKCNFFVEKI 182
           FC +C    H   +C  +K   K  E  +E         + W+      CPKC+  ++K 
Sbjct: 241 FCFSCLSESHSPCSCLMWKLWKKKCEDESE--------TVNWITVNTKLCPKCSKPIQKR 300

[Close]
BLAST of Cucsa.106150 vs. TrEMBL
Match: A0A0A0K9X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430760 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 6.0e-112
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 

Query: 1   KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHS 60
           KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHS
Sbjct: 3   KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHS 62

Query: 61  CWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFC 120
           CWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFC
Sbjct: 63  CWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFC 122

Query: 121 ATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHIT 180
           ATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHIT
Sbjct: 123 ATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHIT 182

Query: 181 CRFINF 187
           CRFINF
Sbjct: 183 CRFINF 188

[Close]
BLAST of Cucsa.106150 vs. TrEMBL
Match: V4SJW2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026066mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.8e-52
Identity = 89/183 (48.63%), Postives = 126/183 (68.85%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGY-SSVSCLALNCPSIIDFHSC 62
           CEIC E KE+  MF+I +C+HS C DC+ KHV+TKI+ G  + V+C  L+C S++++ +C
Sbjct: 122 CEICCERKEKDQMFKIESCIHSICSDCISKHVATKIQVGVITRVTCPGLHCKSVLEYDAC 181

Query: 63  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGAS--IRDCECPLCHRLF 122
             +LPKE+ E W +ALC+ L    ++  CPFKDCS  +  E      I + ECP CHRLF
Sbjct: 182 RPVLPKEVLELWEEALCQELIDASQRFYCPFKDCSAMLVYENNGETVISESECPFCHRLF 241

Query: 123 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 182
           CA C VPWH GV CEEY+RL  +E GR ++++++LA + KW +CP C ++VE+  GC H+
Sbjct: 242 CAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHM 301

[Close]
BLAST of Cucsa.106150 vs. TrEMBL
Match: V4SUU4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026144mg PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.1e-52
Identity = 89/183 (48.63%), Postives = 125/183 (68.31%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGY-SSVSCLALNCPSIIDFHSC 62
           CEIC E KE+  MF+I +C+HS C DC+ KHV+TKI+ G    V+C  L+C S++++ +C
Sbjct: 102 CEICCERKEKDQMFKIESCIHSICSDCISKHVATKIQVGVIRRVTCPGLDCKSVLEYDAC 161

Query: 63  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGAS--IRDCECPLCHRLF 122
             +LPKE+ E W +ALC+ L    ++  CPFKDCS  +  E      I + ECP CHRLF
Sbjct: 162 RPVLPKEVLELWGEALCQELIDASQRFYCPFKDCSAMLVYENDGETVISESECPFCHRLF 221

Query: 123 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 182
           CA C VPWH GV CEEY+RL  +E GR ++++++LA + KW +CP C ++VE+  GC H+
Sbjct: 222 CAQCYVPWHPGVNCEEYQRLNVDERGREDLMVRELAKEKKWSRCPHCKYYVERTEGCPHM 281

[Close]
BLAST of Cucsa.106150 vs. TrEMBL
Match: A0A068VLN7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003346001 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.1e-52
Identity = 83/180 (46.11%), Postives = 121/180 (67.22%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCW 62
           CEIC++ KE   MF I +C H FC +C+ KHV+ ++E     + C A+NC S I+F SC 
Sbjct: 103 CEICVDRKERDQMFTIQSCGHVFCNECISKHVAARLEYNVHGIRCPAVNCGSAIEFDSCG 162

Query: 63  RMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFCAT 122
             +PK++ EKW++ LC+ L    +K  CPFKDCS  +  +    IR+ ECP+C RLFCA 
Sbjct: 163 SFMPKDVLEKWDEMLCDALVDASQKFYCPFKDCSAMLVRDSDEVIRESECPICRRLFCAQ 222

Query: 123 CEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHITCR 182
           C VPWH GV CEE+ RL ++E GR ++++++LA    W +CP+C ++VE+  GC+H+TCR
Sbjct: 223 CYVPWHPGVDCEEFHRLNEDERGREDLMLRELAKAKSWNRCPRCKYYVERNEGCIHMTCR 282

[Close]
BLAST of Cucsa.106150 vs. TrEMBL
Match: A0A059C8R9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03591 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-51
Identity = 88/183 (48.09%), Postives = 123/183 (67.21%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINT-CLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 62
           CEIC E KE   MF I T C H+FC  C+ +HV TK+ +  +++ C  L C  +++  SC
Sbjct: 108 CEICAERKEADEMFRIRTACSHAFCSLCISRHVETKVLDNVTTIKCPGLECEGVLEIDSC 167

Query: 63  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGIT--LERGASIRDCECPLCHRLF 122
            ++LP+ +   W K+LCE  +S  EK  CPFK+CS  +    + G  IRDCECP CHRLF
Sbjct: 168 RQILPENVLSVWEKSLCEATFSEMEKFYCPFKNCSALLIKDCDDGKVIRDCECPYCHRLF 227

Query: 123 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 182
           CA C VPWH GV+CEE++ L ++E GR ++++++LA + KW +CPKC F+VE+  GC HI
Sbjct: 228 CAECSVPWHAGVSCEEFQSLNEDERGREDLIVRELAKEKKWGRCPKCKFYVERTQGCPHI 287

[Close]
BLAST of Cucsa.106150 vs. TAIR10
Match: AT3G53690.1 (AT3G53690.1 RING/U-box superfamily protein)

HSP 1 Score: 183.7 bits (465), Expect = 1.0e-46
Identity = 74/181 (40.88%), Postives = 112/181 (61.88%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCW 62
           CEIC+++K     F I  C H +C DCV K+++ K+++   S+ C    C   ++   C 
Sbjct: 115 CEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCR 174

Query: 63  RMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERG-ASIRDCECPLCHRLFCA 122
           ++LPKE+ ++W  ALCE +    +K  CP+KDCS  + LE     ++D ECP CHR+ C 
Sbjct: 175 QILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKMKDSECPHCHRMVCV 234

Query: 123 TCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHITC 182
            C   WH  +TCEE+++L  NE GR++IL+  +A Q KW +CP C F++EK  GCL++ C
Sbjct: 235 ECGTQWHPEMTCEEFQKLAANERGRDDILLATMAKQKKWKRCPSCKFYIEKSQGCLYMKC 294

[Close]
BLAST of Cucsa.106150 vs. TAIR10
Match: AT3G14250.1 (AT3G14250.1 RING/U-box superfamily protein)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-43
Identity = 73/188 (38.83%), Postives = 118/188 (62.77%), Query Frame = 1 

Query: 1   KLCEICLENKEEGNMFEINT-CLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFH 60
           +LC IC++ K   ++F   T C H++C DC +++V+TKI+   S + C  + C  +I+ +
Sbjct: 93  RLCMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEPY 152

Query: 61  SCWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCS-VGITLERG-ASIRDCECPLCHR 120
           +C  ++PK++ ++W K LCE L S+ +K  CPFKDCS + +  E G A++   EC  CHR
Sbjct: 153 TCRDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDANVTQTECRSCHR 212

Query: 121 LFCATCEVPWHDGVTCEEYKRL---YKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIY 180
           LFC  C+V WH G+ C+E++R     K     ++ L+ ++A   +W +CP C F+V+K+ 
Sbjct: 213 LFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCPSCKFYVDKVE 272

Query: 181 GCLHITCR 183
           GC HI CR
Sbjct: 273 GCQHIKCR 280

[Close]
BLAST of Cucsa.106150 vs. TAIR10
Match: AT2G21420.1 (AT2G21420.1 IBR domain containing protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 67/186 (36.02%), Postives = 100/186 (53.76%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCW 62
           C IC EN +   MF    C H  C  CV +HV   +  G S  +CL   C S + F SC 
Sbjct: 187 CCICRENTDADRMFFTENCFHRQCFSCVNRHVQRMLLCGISP-TCLHFPCNSELTFESCS 246

Query: 63  RMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCE------CPLCH 122
           ++L   + E W + + E L    +K+ CP++ CS+   + + A  R+ +      C  C 
Sbjct: 247 KVLTPNLIEFWKRKIEEDLVPAADKIYCPYRRCSM--LMSKTALSRETDQSNVRACIKCC 306

Query: 123 RLFCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGC 182
           RLFC  C+VP H G++C +YK+L  N +   ++ +K LA++ KW +C +C+  VE   GC
Sbjct: 307 RLFCIDCKVPSHAGLSCVDYKKL--NPDPLYDVKLKSLANKKKWRQCVQCSNLVELFEGC 366

[Close]
BLAST of Cucsa.106150 vs. TAIR10
Match: AT3G43750.1 (AT3G43750.1 RING/U-box protein with C6HC-type zinc finger domain)

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 67/189 (35.45%), Postives = 94/189 (49.74%), Query Frame = 1 

Query: 3   CEICLENKEEGN-MFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 62
           C IC  N  E   MF +  C H FC +CV  ++  K+  G     CL   C S +   SC
Sbjct: 155 CSICFNNVLEAEKMFSVAICGHQFCVECVKHYIEVKLLEG-GVPRCLDYQCESKLTLTSC 214

Query: 63  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCS-------VGITLERGASIRDCECPL 122
             +L  ++   W + + E L    E+V CP   CS       +  + E   S R C C  
Sbjct: 215 GNLLTPKLKAIWKQRIEEELILVAERVYCPNPRCSGLMSKTELSTSTEEDVSTRTC-CVK 274

Query: 123 CHRLFCATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIY 182
           C   FC  C+VPWH  ++C++YKRL  N   +N+I +K LA+Q KW +C KC   + +I 
Sbjct: 275 CGEPFCINCKVPWHSNLSCDDYKRLGPNPT-KNDIKLKVLANQQKWSQCAKCQHMIARIE 334

Query: 183 GCLHITCRF 184
           GC  I CR+
Sbjct: 335 GCNVIICRY 340

[Close]
BLAST of Cucsa.106150 vs. TAIR10
Match: AT3G45470.1 (AT3G45470.1 IBR domain containing protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.5e-29
Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 1 

Query: 3   CEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSCW 62
           C ICLE  +   MF ++ CLH  C  CV + V  K+ NG +  +CL   C   +   +C+
Sbjct: 6   CVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRNG-TVPTCLDYECKLKLSLENCF 65

Query: 63  RMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGIT---LERGASIRDCECPLCHRLF 122
           ++L  ++ E W   + E      +++ CP+ +CS  ++   + R     D  C  C  L 
Sbjct: 66  KVLKPKVIELWKHMMKEESIPLAKRIYCPYINCSTLMSKTEISRSNKSNDRACIKCSGLV 125

Query: 123 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 182
           C  C+VPWH  ++C EYK+L+  +   +++ +K LA+  KW +C KC   +E   GC H+
Sbjct: 126 CIDCKVPWHSDLSCAEYKKLHP-DPVLDDLTLKLLANDQKWRQCVKCRHLIELNQGCNHM 185

[Close]
BLAST of Cucsa.106150 vs. NCBI nr
Match: gi|700189959|gb|KGN45192.1| (hypothetical protein Csa_7G430760 [Cucumis sativus])

HSP 1 Score: 411.4 bits (1056), Expect = 8.6e-112
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1 

Query: 1   KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHS 60
           KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHS
Sbjct: 3   KLCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHS 62

Query: 61  CWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFC 120
           CWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFC
Sbjct: 63  CWRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGASIRDCECPLCHRLFC 122

Query: 121 ATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHIT 180
           ATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHIT
Sbjct: 123 ATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHIT 182

Query: 181 CRFINF 187
           CRFINF
Sbjct: 183 CRFINF 188

[Close]
BLAST of Cucsa.106150 vs. NCBI nr
Match: gi|658026285|ref|XP_008348565.1| (PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Malus domestica])

HSP 1 Score: 223.4 bits (568), Expect = 3.3e-55
Identity = 92/183 (50.27%), Postives = 129/183 (70.49%), Query Frame = 1 

Query: 2   LCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 61
           LC IC+E KE   MF    C+HSFC DC+ KHV++KI+     VSC  L+C ++++  +C
Sbjct: 113 LCGICVEMKEADEMFRNEGCVHSFCSDCITKHVASKIQANIHVVSCPGLDCRAVLELDAC 172

Query: 62  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCSVGITLERGA--SIRDCECPLCHRLF 121
             MLPKE+ E+WN ALCE +     ++ CPF DCS  + ++     ++R+ ECP+CHRLF
Sbjct: 173 MPMLPKEVIERWNDALCEAMVLGAPRLYCPFSDCSTVLMIDNEGEEAVRESECPICHRLF 232

Query: 122 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 181
           CA C+VPWH GV CEEY+RL ++E GR ++++K+LA Q KW +CP+C ++VEK  GCLHI
Sbjct: 233 CARCQVPWHPGVDCEEYRRLNEDERGRADLMVKELAKQKKWKRCPRCKYYVEKTQGCLHI 292

Query: 182 TCR 183
           TCR
Sbjct: 293 TCR 295

[Close]
BLAST of Cucsa.106150 vs. NCBI nr
Match: gi|694377993|ref|XP_009365261.1| (PREDICTED: probable E3 ubiquitin-protein ligase RNF217 isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 222.6 bits (566), Expect = 5.6e-55
Identity = 92/183 (50.27%), Postives = 131/183 (71.58%), Query Frame = 1 

Query: 2   LCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 61
           LC IC E KE   MF    C+HSFC DC+ KHV++KI+     VSC +L+C ++++  +C
Sbjct: 113 LCGICFEMKEADEMFRNEGCVHSFCSDCITKHVASKIQANIHVVSCPSLDCRAVLELDAC 172

Query: 62  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCS--VGITLERGASIRDCECPLCHRLF 121
             MLPKE+ E+WN ALCE +    +++ CPF DCS  + I +E   +IR+ ECP+CHRLF
Sbjct: 173 MPMLPKEVIERWNDALCEAMVLGAQRLYCPFSDCSTVLMIDIEGEEAIRESECPICHRLF 232

Query: 122 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 181
           CA C++PWH GV CEE++RL ++E GR ++++++LA Q KW +CP+C ++VEK  GCLHI
Sbjct: 233 CARCQIPWHPGVDCEEFQRLNESERGRADLMVRELAKQKKWKRCPRCKYYVEKTQGCLHI 292

Query: 182 TCR 183
           TCR
Sbjct: 293 TCR 295

[Close]
BLAST of Cucsa.106150 vs. NCBI nr
Match: gi|694377990|ref|XP_009365260.1| (PREDICTED: putative uncharacterized protein At4g01020, chloroplastic isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 222.6 bits (566), Expect = 5.6e-55
Identity = 92/183 (50.27%), Postives = 131/183 (71.58%), Query Frame = 1 

Query: 2   LCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 61
           LC IC E KE   MF    C+HSFC DC+ KHV++KI+     VSC +L+C ++++  +C
Sbjct: 170 LCGICFEMKEADEMFRNEGCVHSFCSDCITKHVASKIQANIHVVSCPSLDCRAVLELDAC 229

Query: 62  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCS--VGITLERGASIRDCECPLCHRLF 121
             MLPKE+ E+WN ALCE +    +++ CPF DCS  + I +E   +IR+ ECP+CHRLF
Sbjct: 230 MPMLPKEVIERWNDALCEAMVLGAQRLYCPFSDCSTVLMIDIEGEEAIRESECPICHRLF 289

Query: 122 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 181
           CA C++PWH GV CEE++RL ++E GR ++++++LA Q KW +CP+C ++VEK  GCLHI
Sbjct: 290 CARCQIPWHPGVDCEEFQRLNESERGRADLMVRELAKQKKWKRCPRCKYYVEKTQGCLHI 349

Query: 182 TCR 183
           TCR
Sbjct: 350 TCR 352

[Close]
BLAST of Cucsa.106150 vs. NCBI nr
Match: gi|694377985|ref|XP_009365258.1| (PREDICTED: uncharacterized protein DDB_G0292642-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 222.6 bits (566), Expect = 5.6e-55
Identity = 92/183 (50.27%), Postives = 131/183 (71.58%), Query Frame = 1 

Query: 2   LCEICLENKEEGNMFEINTCLHSFCRDCVIKHVSTKIENGYSSVSCLALNCPSIIDFHSC 61
           LC IC E KE   MF    C+HSFC DC+ KHV++KI+     VSC +L+C ++++  +C
Sbjct: 174 LCGICFEMKEADEMFRNEGCVHSFCSDCITKHVASKIQANIHVVSCPSLDCRAVLELDAC 233

Query: 62  WRMLPKEIGEKWNKALCEVLYSTEEKVVCPFKDCS--VGITLERGASIRDCECPLCHRLF 121
             MLPKE+ E+WN ALCE +    +++ CPF DCS  + I +E   +IR+ ECP+CHRLF
Sbjct: 234 MPMLPKEVIERWNDALCEAMVLGAQRLYCPFSDCSTVLMIDIEGEEAIRESECPICHRLF 293

Query: 122 CATCEVPWHDGVTCEEYKRLYKNEEGRNEILMKKLASQMKWMKCPKCNFFVEKIYGCLHI 181
           CA C++PWH GV CEE++RL ++E GR ++++++LA Q KW +CP+C ++VEK  GCLHI
Sbjct: 294 CARCQIPWHPGVDCEEFQRLNESERGRADLMVRELAKQKKWKRCPRCKYYVEKTQGCLHI 353

Query: 182 TCR 183
           TCR
Sbjct: 354 TCR 356

The following BLAST results are available for this feature:
BLAST of Cucsa.106150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN217_MOUSE2.0e-1526.53Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus GN=Rnf217 PE=3 SV=2[more]
RN217_XENLA2.6e-1526.94Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=... [more]
RN217_HUMAN4.4e-1526.53Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens GN=RNF217 PE=2 SV=4[more]
DEAHC_ARATH1.8e-1327.17ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana GN=At5g... [more]
ARI3_ARATH3.1e-1328.04Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana GN=ARI3 PE=2 S... [more]
BLAST of Cucsa.106150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9X9_CUCSA6.0e-112100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430760 PE=4 SV=1[more]
V4SJW2_9ROSI1.8e-5248.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026066mg PE=4 SV=1[more]
V4SUU4_9ROSI4.1e-5248.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026144mg PE=4 SV=1[more]
A0A068VLN7_COFCA9.1e-5246.11Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00003346001 PE=4 SV=1[more]
A0A059C8R9_EUCGR2.6e-5148.09Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E03591 PE=4 SV=1[more]
BLAST of Cucsa.106150 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G53690.11.0e-4640.88 RING/U-box superfamily protein[more]
AT3G14250.12.4e-4338.83 RING/U-box superfamily protein[more]
AT2G21420.11.5e-2936.02 IBR domain containing protein[more]
AT3G43750.11.9e-2935.45 RING/U-box protein with C6HC-type zinc finger domain[more]
AT3G45470.12.5e-2932.79 IBR domain containing protein[more]
BLAST of Cucsa.106150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189959|gb|KGN45192.1|8.6e-112100.00hypothetical protein Csa_7G430760 [Cucumis sativus][more]
gi|658026285|ref|XP_008348565.1|3.3e-5550.27PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Malus domestica][more]
gi|694377993|ref|XP_009365261.1|5.6e-5550.27PREDICTED: probable E3 ubiquitin-protein ligase RNF217 isoform X3 [Pyrus x brets... [more]
gi|694377990|ref|XP_009365260.1|5.6e-5550.27PREDICTED: putative uncharacterized protein At4g01020, chloroplastic isoform X2 ... [more]
gi|694377985|ref|XP_009365258.1|5.6e-5550.27PREDICTED: uncharacterized protein DDB_G0292642-like isoform X1 [Pyrus x bretsch... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR002867IBR_dom
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR018957Znf_C3HC4_RING-type
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0016567protein ubiquitination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.106150.1Cucsa.106150.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 3..55
score: 0.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 3..53
score: 9
IPR002867IBR domainPFAMPF01485IBRcoord: 72..133
score: 1.
IPR002867IBR domainSMARTSM00647ibrneu5coord: 71..133
score: 5.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 2..46
score: 4.
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 21..30
scor
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 3..40
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 133..153
scor
NoneNo IPR availablePANTHERPTHR11685:SF149SUBFAMILY NOT NAMEDcoord: 2..182
score: 1.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 2..80
score: 1.06E-13coord: 73..138
score: 1.52E-8coord: 146..181
score: 6.4