Cucsa.105750 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105750
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing family protein
Locationscaffold00929 : 270222 .. 271199 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTATGCGTTGGCTCATTTGGTTAGTGAAGCGATTGCTGCTTATGAGAGATTACGGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTTATTGATGCACTTTGTGAGTCTAGACATGTCGATGAAGCGCAAGAACTGTGTTTTGGGAAGAATAGGAAGTTGGATTGTGATTCGAGTACGAAGATTCATAACTTAATTCTTCGTGGTTGGCTTAAGATGGGATGGTGGAGTAAATGTAGAGACTTTTGGGAAGAAATGGATAAGAAGGGCGTTCGTAAGGATTTACATTCGTATTCGATATATATGGATATACAGTGCAAGAGTGGGAAACCTTGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGAATGAAATTGGATGTAGTGGCCTATAATACGGTGATTCATGCTGTTGGGATTTCGGAAGGTGTCGATTTTGCCAGCCGGGTGTTTCATGAGATGAAGGAAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTGTTATTAAGCTGTTTTGTGAGAATGGAAGATTCAAGGATGCCCACATGATGCTCGACCAAATGCTTAAGAGGGACTGTCAACCTAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCCGAAAGAGATTCTCGTGTTATTTGATAGGATGATTAAATATGGGGTTCATCCAAAAATGGATACCTATGTGATGCTCTTGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTTTAGTGTGGAATAAGATGGAGGAACTTGGGTGTAGCCCGAATGAGTGTGCTTACAATGCTTTAATTGATGCTCTTGTGGAGAAGGGAATGATAGATATGGCTAGAAAGTATGACGAAGAGATGGTAGCGAAAGGTCTTTCACCTAAGCTGAGAGTGGAATTGGGGACACAGATGATGAATGGTGGCTATCATGCCAATGTGAACTGCAACAAGTAG

mRNA sequence

CGTTATGCGTTGGCTCATTTGGTTAGTGAAGCGATTGCTGCTTATGAGAGATTACGGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTTATTGATGCACTTTGTGAGTCTAGACATGTCGATGAAGCGCAAGAACTGTGTTTTGGGAAGAATAGGAAGTTGGATTGTGATTCGAGTACGAAGATTCATAACTTAATTCTTCGTGGTTGGCTTAAGATGGGATGGTGGAGTAAATGTAGAGACTTTTGGGAAGAAATGGATAAGAAGGGCGTTCGTAAGGATTTACATTCGTATTCGATATATATGGATATACAGTGCAAGAGTGGGAAACCTTGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGAATGAAATTGGATGTAGTGGCCTATAATACGGTGATTCATGCTGTTGGGATTTCGGAAGGTGTCGATTTTGCCAGCCGGGTGTTTCATGAGATGAAGGAAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTGTTATTAAGCTGTTTTGTGAGAATGGAAGATTCAAGGATGCCCACATGATGCTCGACCAAATGCTTAAGAGGGACTGTCAACCTAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCCGAAAGAGATTCTCGTGTTATTTGATAGGATGATTAAATATGGGGTTCATCCAAAAATGGATACCTATGTGATGCTCTTGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTTTAGTGTGGAATAAGATGGAGGAACTTGGGTGTAGCCCGAATGAGTGTGCTTACAATGCTTTAATTGATGCTCTTGTGGAGAAGGGAATGATAGATATGGCTAGAAAGTATGACGAAGAGATGGTAGCGAAAGGTCTTTCACCTAAGCTGAGAGTGGAATTGGGGACACAGATGATGAATGGTGGCTATCATGCCAATGTGAACTGCAACAAGTAG

Coding sequence (CDS)

CGTTATGCGTTGGCTCATTTGGTTAGTGAAGCGATTGCTGCTTATGAGAGATTACGGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTTATTGATGCACTTTGTGAGTCTAGACATGTCGATGAAGCGCAAGAACTGTGTTTTGGGAAGAATAGGAAGTTGGATTGTGATTCGAGTACGAAGATTCATAACTTAATTCTTCGTGGTTGGCTTAAGATGGGATGGTGGAGTAAATGTAGAGACTTTTGGGAAGAAATGGATAAGAAGGGCGTTCGTAAGGATTTACATTCGTATTCGATATATATGGATATACAGTGCAAGAGTGGGAAACCTTGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGAATGAAATTGGATGTAGTGGCCTATAATACGGTGATTCATGCTGTTGGGATTTCGGAAGGTGTCGATTTTGCCAGCCGGGTGTTTCATGAGATGAAGGAAATGGGGTGTAAGCCTAACGTTGTGACTTGCAATACTGTTATTAAGCTGTTTTGTGAGAATGGAAGATTCAAGGATGCCCACATGATGCTCGACCAAATGCTTAAGAGGGACTGTCAACCTAATGTTATCACCTATCATTGTTTTTTCAGGTCTCTTGAAAAGCCGAAAGAGATTCTCGTGTTATTTGATAGGATGATTAAATATGGGGTTCATCCAAAAATGGATACCTATGTGATGCTCTTGAGGAAGTTTGGAAGATGGGGGTTTCTAAGACCAGTGTTTTTAGTGTGGAATAAGATGGAGGAACTTGGGTGTAGCCCGAATGAGTGTGCTTACAATGCTTTAATTGATGCTCTTGTGGAGAAGGGAATGATAGATATGGCTAGAAAGTATGACGAAGAGATGGTAGCGAAAGGTCTTTCACCTAAGCTGAGAGTGGAATTGGGGACACAGATGATGAATGGTGGCTATCATGCCAATGTGAACTGCAACAAGTAG

Protein sequence

RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLRVELGTQMMNGGYHANVNCNK*
Homology
[Close]
BLAST of Cucsa.105750 vs. Swiss-Prot
Match: PP136_ARATH (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana GN=At1g80550 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-122
Identity = 209/310 (67.42%), Postives = 251/310 (80.97%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLD--C 60
           RY  AHLV EAI AY++L +F LRDETSF NL+DALCE +HV EA+ELCFGKN   +   
Sbjct: 126 RYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFS 185

Query: 61  DSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            S+TKIHNLILRGW K+GWW KC+++W++MD +GV KDL SYSIYMDI CKSGKPWKAVK
Sbjct: 186 VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK 245

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMK + MKLDVVAYNTVI A+G S+GV+F  RVF EM+E GC+PNV T NT+IKL C
Sbjct: 246 LYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC 305

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           E+GR +DA+ MLD+M KR CQP+ ITY C F  LEKP EIL LF RMI+ GV PKMDTYV
Sbjct: 306 EDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYV 365

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKF RWGFL+PV  VW  M+E G +P+  AYNA+IDAL++KGM+DMAR+Y+EEM+ +
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425

Query: 301 GLSPKLRVEL 309
           GLSP+ R EL
Sbjct: 426 GLSPRRRPEL 435

[Close]
BLAST of Cucsa.105750 vs. Swiss-Prot
Match: PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 3.0e-43
Identity = 107/310 (34.52%), Postives = 163/310 (52.58%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           +Y   H V +AI  +   + FKL      F +L+ ALC  ++V +A  L F    K   D
Sbjct: 206 KYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD 265

Query: 61  SSTKIHNLILRGWLKM-GWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
           +  K  N++L GW  + G   +    W EM   GV+ D+ SYS  +    K G   K +K
Sbjct: 266 A--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 325

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKE-MGCKPNVVTCNTVIKLF 180
           L+  MKK+ ++ D   YN V+HA+  +  V  A  +   M+E  G +PNVVT N++IK  
Sbjct: 326 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 385

Query: 181 CENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTY 240
           C+  + ++A  + D+ML++   P + TYH F R L   +E+  L  +M K G  P ++TY
Sbjct: 386 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETY 445

Query: 241 VMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVA 300
           +ML+RK  RW     V L+W++M+E    P+  +Y  +I  L   G I+ A  Y +EM  
Sbjct: 446 IMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 505

Query: 301 KGLSPKLRVE 308
           KG+ P   VE
Sbjct: 506 KGMRPNENVE 513


HSP 2 Score: 40.8 bits (94), Expect = 3.3e-02
Identity = 51/245 (20.82%), Postives = 96/245 (39.18%), Query Frame = 1 

Query: 79  SKCRDFWEEM--------DKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKL 138
           S+ R+ WE           ++G  + +  Y   + I  K  K   A  L  EM+K    L
Sbjct: 135 SRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSL 194

Query: 139 D-------VVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRF 198
                   ++     +H VG       A   FH  K    +  +    +++   C     
Sbjct: 195 VNSQTLLIMIRKYCAVHDVGK------AINTFHAYKRFKLEMGIDDFQSLLSALCRYKNV 254

Query: 199 KDA-HMMLDQMLKR--DCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 258
            DA H++     K   D +   I  + +   +  P+E   ++  M   GV   + +Y  +
Sbjct: 255 SDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSM 314

Query: 259 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEM-VAKG 305
           +  + + G L  V  ++++M++    P+   YNA++ AL +   +  AR   + M   KG
Sbjct: 315 ISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKG 373

[Close]
BLAST of Cucsa.105750 vs. Swiss-Prot
Match: PP233_ARATH (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-41
Identity = 100/311 (32.15%), Postives = 164/311 (52.73%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           RYA AH V EA+  +ER +EF + D+  +F  L+  LC  +HV+ A+ L   + R+  CD
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 246

Query: 61  SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKL 120
              K  N+IL GW  +G   + + FW+++     R D+ SY   ++   K GK  KA++L
Sbjct: 247 --IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 306

Query: 121 YKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCE 180
           Y+ M       DV   N VI A+   + +  A  VF E+ E G  PNVVT N+++K  C+
Sbjct: 307 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 366

Query: 181 NGRFKDAHMMLDQMLKR--DCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTY 240
             R +    ++++M  +   C PN +T+    +  ++ K++ ++ +RM K       D Y
Sbjct: 367 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLY 426

Query: 241 VMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVA 300
            ++ R + +W     V  +W++ME  G  P++  Y   I  L  KG I  A  Y +EM++
Sbjct: 427 NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMS 486

Query: 301 KGLSPKLRVEL 309
           KG+ P+ R E+
Sbjct: 487 KGMVPEPRTEM 495

[Close]
BLAST of Cucsa.105750 vs. Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.5e-34
Identity = 97/310 (31.29%), Postives = 157/310 (50.65%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFK-LRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           RYA A    +A+  +  + E    +D  SF  ++D LC+S+ V++A EL      +   D
Sbjct: 135 RYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVD 194

Query: 61  SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKL 120
           + T  +N+IL GW  +    K  +  +EM ++G+  +L +Y+  +    ++G+   A + 
Sbjct: 195 TVT--YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 254

Query: 121 YKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCE 180
           + EMKK+  ++DVV Y TV+H  G++  +  A  VF EM   G  P+V T N +I++ C+
Sbjct: 255 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 314

Query: 181 NGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEIL---VLFDRMIKYGVHPKMDT 240
               ++A +M ++M++R  +PNV TY+   R L    E      L  RM   G  P   T
Sbjct: 315 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 374

Query: 241 YVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDAL-VEKGMIDM--ARKYDE 300
           Y M++R +     +     ++ KM    C PN   YN LI  + V K   DM  A K   
Sbjct: 375 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLL 434

Query: 301 EMVAKGLSPK 304
           EMV +G  P+
Sbjct: 435 EMVERGFIPR 442


HSP 2 Score: 105.9 bits (263), Expect = 8.4e-22
Identity = 77/290 (26.55%), Postives = 132/290 (45.52%), Query Frame = 1 

Query: 19  REFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKMGWW 78
           RE+ + D +SF   ID +    H+         + R L    S K   ++   +   G  
Sbjct: 85  REY-VHDASSFDLAID-IAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKP 144

Query: 79  SKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTV 138
            K    +  M + G  +DL S++  +D+ CKS +  KA +L++ ++ +   +D V YN +
Sbjct: 145 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 204

Query: 139 IHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDC 198
           ++   + +    A  V  EM E G  PN+ T NT++K F   G+ + A     +M KRDC
Sbjct: 205 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 264

Query: 199 QPNVITYHCF---FRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFL 258
           + +V+TY      F    + K    +FD MI+ GV P + TY  +++   +   +    +
Sbjct: 265 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 324

Query: 259 VWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLR 306
           ++ +M   G  PN   YN LI  L   G      +  + M  +G  P  +
Sbjct: 325 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQ 371

[Close]
BLAST of Cucsa.105750 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-31
Identity = 91/306 (29.74%), Postives = 151/306 (49.35%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           +YA A  V EAI A+  + ++ L     +F  L+ ALC+S++V +AQE+      +   D
Sbjct: 177 KYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPD 236

Query: 61  SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKL 120
           S T  ++++L GW K     K R+ + EM   G   D+ +YSI +DI CK+G+  +A+ +
Sbjct: 237 SKT--YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 296

Query: 121 YKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCE 180
            + M     K     Y+ ++H  G    ++ A   F EM+  G K +V   N++I  FC+
Sbjct: 297 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 356

Query: 181 NGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSL---EKPKEILVLFDRMIKYGVHPKMDT 240
             R K+ + +L +M  +   PN  + +   R L    +  E   +F +MIK    P  DT
Sbjct: 357 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADT 416

Query: 241 YVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMV 300
           Y M+++ F     +     VW  M + G  P+   ++ LI+ L E+     A    EEM+
Sbjct: 417 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 476

Query: 301 AKGLSP 303
             G+ P
Sbjct: 477 EMGIRP 479

[Close]
BLAST of Cucsa.105750 vs. TrEMBL
Match: A0A0A0KBR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432170 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 1.9e-193
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS 60
           RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS
Sbjct: 126 RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS 185

Query: 61  STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 120
           STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY
Sbjct: 186 STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 245

Query: 121 KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 180
           KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN
Sbjct: 246 KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 305

Query: 181 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 240
           GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML
Sbjct: 306 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 365

Query: 241 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL 300
           LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL
Sbjct: 366 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL 425

Query: 301 SPKLRVELGTQMMNGGYHANVNCNK 326
           SPKLRVELGTQMMNGGYHANVNCNK
Sbjct: 426 SPKLRVELGTQMMNGGYHANVNCNK 450

[Close]
BLAST of Cucsa.105750 vs. TrEMBL
Match: A0A061G8S5_THECC (Pentatricopeptide repeat (PPR) superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_027343 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.0e-139
Identity = 237/318 (74.53%), Postives = 273/318 (85.85%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCF-GKNRKLDCD 60
           RY  AHLV EAI+ ++RL EF L+DE SFCNL+DALCE +HV EAQELCF GK +++   
Sbjct: 40  RYITAHLVKEAISTFDRLEEFNLKDEISFCNLVDALCEYKHVIEAQELCFFGKIKEIGLS 99

Query: 61  -SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            + TKIHN+ILRGW KMGWWSKCR+FW+EMDKKGV+KDLHSYSIYMDI CKSGKPWKAVK
Sbjct: 100 VNDTKIHNMILRGWFKMGWWSKCREFWQEMDKKGVKKDLHSYSIYMDIMCKSGKPWKAVK 159

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMKKKGMKLDVVAYNTVI A+GISEG DF   VF EM+++GC+PNVVT NTVIKL C
Sbjct: 160 LYKEMKKKGMKLDVVAYNTVIRAIGISEGADFGVGVFREMRDLGCEPNVVTYNTVIKLLC 219

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           ENGR + A+ +LDQMLK+DC P+VITYHCFF  LEKP+EIL LFD MI  G+ P+MDTYV
Sbjct: 220 ENGRVRQAYAVLDQMLKKDCAPDVITYHCFFGCLEKPREILKLFDLMITNGIQPRMDTYV 279

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKFGRWGFLRPVF+VW KMEELG SPNE AYNALIDAL++KGM+DMARKYDEEM+ K
Sbjct: 280 MLMRKFGRWGFLRPVFMVWKKMEELGSSPNEFAYNALIDALIQKGMLDMARKYDEEMLEK 339

Query: 301 GLSPKLRVELGTQMMNGG 317
           GLS K R ELGT+++ GG
Sbjct: 340 GLSSKPREELGTKLVQGG 357

[Close]
BLAST of Cucsa.105750 vs. TrEMBL
Match: A0A061G7W5_THECC (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_027343 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 2.0e-139
Identity = 237/318 (74.53%), Postives = 273/318 (85.85%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCF-GKNRKLDCD 60
           RY  AHLV EAI+ ++RL EF L+DE SFCNL+DALCE +HV EAQELCF GK +++   
Sbjct: 20  RYITAHLVKEAISTFDRLEEFNLKDEISFCNLVDALCEYKHVIEAQELCFFGKIKEIGLS 79

Query: 61  -SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            + TKIHN+ILRGW KMGWWSKCR+FW+EMDKKGV+KDLHSYSIYMDI CKSGKPWKAVK
Sbjct: 80  VNDTKIHNMILRGWFKMGWWSKCREFWQEMDKKGVKKDLHSYSIYMDIMCKSGKPWKAVK 139

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMKKKGMKLDVVAYNTVI A+GISEG DF   VF EM+++GC+PNVVT NTVIKL C
Sbjct: 140 LYKEMKKKGMKLDVVAYNTVIRAIGISEGADFGVGVFREMRDLGCEPNVVTYNTVIKLLC 199

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           ENGR + A+ +LDQMLK+DC P+VITYHCFF  LEKP+EIL LFD MI  G+ P+MDTYV
Sbjct: 200 ENGRVRQAYAVLDQMLKKDCAPDVITYHCFFGCLEKPREILKLFDLMITNGIQPRMDTYV 259

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKFGRWGFLRPVF+VW KMEELG SPNE AYNALIDAL++KGM+DMARKYDEEM+ K
Sbjct: 260 MLMRKFGRWGFLRPVFMVWKKMEELGSSPNEFAYNALIDALIQKGMLDMARKYDEEMLEK 319

Query: 301 GLSPKLRVELGTQMMNGG 317
           GLS K R ELGT+++ GG
Sbjct: 320 GLSSKPREELGTKLVQGG 337

[Close]
BLAST of Cucsa.105750 vs. TrEMBL
Match: A0A067DFS1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041804mg PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 4.5e-139
Identity = 233/321 (72.59%), Postives = 275/321 (85.67%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCD- 60
           RY  AHLV+EA+  + +L EF L+DE S+CNL+DALCE +HV EAQELCFG+N+ +    
Sbjct: 76  RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135

Query: 61  ----SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWK 120
               + TKI+N+ILRGW KM WW KCR+FWEEMDK+GV KDLHSYSIYMDI CKSGKPWK
Sbjct: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195

Query: 121 AVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIK 180
           AVKLYKEMKKKG+K+DVVAYNTVI AVG+SEGVDFA RV+ EM+EMGC+P+VVTCNTVIK
Sbjct: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255

Query: 181 LFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMD 240
           L CENGR ++A+ +L +M K+ C P+VITYHCFFR LEKP+EIL LFDRMI+ G+ PKMD
Sbjct: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMD 315

Query: 241 TYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEM 300
           TYVMLLRKFGRWGFLRPVF+VW KMEELGCSP+E AYNAL+DAL++KGM+DMARKYDEEM
Sbjct: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375

Query: 301 VAKGLSPKLRVELGTQMMNGG 317
            AKGLS K R ELGT+++ GG
Sbjct: 376 FAKGLSAKPREELGTKLVQGG 396

[Close]
BLAST of Cucsa.105750 vs. TrEMBL
Match: A0A0D2UQZ2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G085200 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 5.0e-138
Identity = 235/320 (73.44%), Postives = 274/320 (85.62%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCF-GKNRKLDCD 60
           RY  AHLV+EAIA ++RL EF L+D+ SFCNL+DALCE +HV EA ELCF G+++ L  +
Sbjct: 171 RYITAHLVNEAIATFDRLGEFNLKDDISFCNLVDALCEYKHVIEAHELCFFGRSKDLGFN 230

Query: 61  -SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            + TKIHN+ILRGW KMGWWSKCR+FWEEMDKKG++KDLHSYSIYMDI CK GKPWKAVK
Sbjct: 231 VNDTKIHNMILRGWFKMGWWSKCREFWEEMDKKGIKKDLHSYSIYMDIMCKCGKPWKAVK 290

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMKKKGMKLDVVAYNTVI A+G+S+G +F   VF EM+++GC+PNVVT NTVIKL  
Sbjct: 291 LYKEMKKKGMKLDVVAYNTVIRAIGVSDGAEFGVGVFREMRDLGCEPNVVTYNTVIKLLL 350

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           ENGR + A+ +LDQMLK DC P+VITYHCFF SLEKPKEIL LFD MI+ GV P+MDTYV
Sbjct: 351 ENGRVRQAYSVLDQMLKNDCAPDVITYHCFFGSLEKPKEILKLFDLMIRNGVQPRMDTYV 410

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKFGRWGFLRPVF+VW KMEELG SPNE AYNALIDAL+EKGM+DMARKYDEEM+AK
Sbjct: 411 MLMRKFGRWGFLRPVFMVWKKMEELGSSPNEFAYNALIDALIEKGMLDMARKYDEEMLAK 470

Query: 301 GLSPKLRVELGTQMMNGGYH 319
           G+S K R ELGT+++ G  H
Sbjct: 471 GISSKPREELGTKLLQGEPH 490

[Close]
BLAST of Cucsa.105750 vs. TAIR10
Match: AT1G80550.1 (AT1G80550.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 441.0 bits (1133), Expect = 6.2e-124
Identity = 209/310 (67.42%), Postives = 251/310 (80.97%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLD--C 60
           RY  AHLV EAI AY++L +F LRDETSF NL+DALCE +HV EA+ELCFGKN   +   
Sbjct: 126 RYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFS 185

Query: 61  DSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            S+TKIHNLILRGW K+GWW KC+++W++MD +GV KDL SYSIYMDI CKSGKPWKAVK
Sbjct: 186 VSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK 245

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMK + MKLDVVAYNTVI A+G S+GV+F  RVF EM+E GC+PNV T NT+IKL C
Sbjct: 246 LYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLC 305

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           E+GR +DA+ MLD+M KR CQP+ ITY C F  LEKP EIL LF RMI+ GV PKMDTYV
Sbjct: 306 EDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYV 365

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKF RWGFL+PV  VW  M+E G +P+  AYNA+IDAL++KGM+DMAR+Y+EEM+ +
Sbjct: 366 MLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425

Query: 301 GLSPKLRVEL 309
           GLSP+ R EL
Sbjct: 426 GLSPRRRPEL 435

[Close]
BLAST of Cucsa.105750 vs. TAIR10
Match: AT5G15010.1 (AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-44
Identity = 107/310 (34.52%), Postives = 163/310 (52.58%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           +Y   H V +AI  +   + FKL      F +L+ ALC  ++V +A  L F    K   D
Sbjct: 206 KYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD 265

Query: 61  SSTKIHNLILRGWLKM-GWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
           +  K  N++L GW  + G   +    W EM   GV+ D+ SYS  +    K G   K +K
Sbjct: 266 A--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 325

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKE-MGCKPNVVTCNTVIKLF 180
           L+  MKK+ ++ D   YN V+HA+  +  V  A  +   M+E  G +PNVVT N++IK  
Sbjct: 326 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 385

Query: 181 CENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTY 240
           C+  + ++A  + D+ML++   P + TYH F R L   +E+  L  +M K G  P ++TY
Sbjct: 386 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETY 445

Query: 241 VMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVA 300
           +ML+RK  RW     V L+W++M+E    P+  +Y  +I  L   G I+ A  Y +EM  
Sbjct: 446 IMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 505

Query: 301 KGLSPKLRVE 308
           KG+ P   VE
Sbjct: 506 KGMRPNENVE 513


HSP 2 Score: 40.8 bits (94), Expect = 1.9e-03
Identity = 51/245 (20.82%), Postives = 96/245 (39.18%), Query Frame = 1 

Query: 79  SKCRDFWEEM--------DKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKL 138
           S+ R+ WE           ++G  + +  Y   + I  K  K   A  L  EM+K    L
Sbjct: 135 SRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSL 194

Query: 139 D-------VVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRF 198
                   ++     +H VG       A   FH  K    +  +    +++   C     
Sbjct: 195 VNSQTLLIMIRKYCAVHDVGK------AINTFHAYKRFKLEMGIDDFQSLLSALCRYKNV 254

Query: 199 KDA-HMMLDQMLKR--DCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 258
            DA H++     K   D +   I  + +   +  P+E   ++  M   GV   + +Y  +
Sbjct: 255 SDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSM 314

Query: 259 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEM-VAKG 305
           +  + + G L  V  ++++M++    P+   YNA++ AL +   +  AR   + M   KG
Sbjct: 315 ISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKG 373

[Close]
BLAST of Cucsa.105750 vs. TAIR10
Match: AT3G15200.1 (AT3G15200.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 171.4 bits (433), Expect = 9.2e-43
Identity = 100/311 (32.15%), Postives = 164/311 (52.73%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           RYA AH V EA+  +ER +EF + D+  +F  L+  LC  +HV+ A+ L   + R+  CD
Sbjct: 187 RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD 246

Query: 61  SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKL 120
              K  N+IL GW  +G   + + FW+++     R D+ SY   ++   K GK  KA++L
Sbjct: 247 --IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 306

Query: 121 YKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCE 180
           Y+ M       DV   N VI A+   + +  A  VF E+ E G  PNVVT N+++K  C+
Sbjct: 307 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 366

Query: 181 NGRFKDAHMMLDQMLKR--DCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTY 240
             R +    ++++M  +   C PN +T+    +  ++ K++ ++ +RM K       D Y
Sbjct: 367 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLY 426

Query: 241 VMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVA 300
            ++ R + +W     V  +W++ME  G  P++  Y   I  L  KG I  A  Y +EM++
Sbjct: 427 NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMS 486

Query: 301 KGLSPKLRVEL 309
           KG+ P+ R E+
Sbjct: 487 KGMVPEPRTEM 495

[Close]
BLAST of Cucsa.105750 vs. TAIR10
Match: AT1G74900.1 (AT1G74900.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 5.4e-35
Identity = 92/303 (30.36%), Postives = 151/303 (49.83%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFK-LRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           RYA A    +A+  +  + E    +D  SF  ++D LC+S+ V++A EL      +   D
Sbjct: 135 RYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVD 194

Query: 61  SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKL 120
           + T  +N+IL GW  +    K  +  +EM ++G+  +L +Y+  +    ++G+   A + 
Sbjct: 195 TVT--YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 254

Query: 121 YKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCE 180
           + EMKK+  ++DVV Y TV+H  G++  +  A  VF EM   G  P+V T N +I++ C+
Sbjct: 255 FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCK 314

Query: 181 NGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEIL---VLFDRMIKYGVHPKMDT 240
               ++A +M ++M++R  +PNV TY+   R L    E      L  RM   G  P   T
Sbjct: 315 KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQT 374

Query: 241 YVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMV 300
           Y M++R +     +     ++ KM    C PN   YN LI  +         RK  E+MV
Sbjct: 375 YNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM-------FVRKRSEDMV 428


HSP 2 Score: 105.9 bits (263), Expect = 4.7e-23
Identity = 77/290 (26.55%), Postives = 132/290 (45.52%), Query Frame = 1 

Query: 19  REFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKMGWW 78
           RE+ + D +SF   ID +    H+         + R L    S K   ++   +   G  
Sbjct: 85  REY-VHDASSFDLAID-IAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKP 144

Query: 79  SKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTV 138
            K    +  M + G  +DL S++  +D+ CKS +  KA +L++ ++ +   +D V YN +
Sbjct: 145 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 204

Query: 139 IHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDC 198
           ++   + +    A  V  EM E G  PN+ T NT++K F   G+ + A     +M KRDC
Sbjct: 205 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 264

Query: 199 QPNVITYHCF---FRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFL 258
           + +V+TY      F    + K    +FD MI+ GV P + TY  +++   +   +    +
Sbjct: 265 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 324

Query: 259 VWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLR 306
           ++ +M   G  PN   YN LI  L   G      +  + M  +G  P  +
Sbjct: 325 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQ 371

[Close]
BLAST of Cucsa.105750 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.5e-32
Identity = 91/306 (29.74%), Postives = 151/306 (49.35%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCESRHVDEAQELCFGKNRKLDCD 60
           +YA A  V EAI A+  + ++ L     +F  L+ ALC+S++V +AQE+      +   D
Sbjct: 177 KYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPD 236

Query: 61  SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKL 120
           S T  ++++L GW K     K R+ + EM   G   D+ +YSI +DI CK+G+  +A+ +
Sbjct: 237 SKT--YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 296

Query: 121 YKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCE 180
            + M     K     Y+ ++H  G    ++ A   F EM+  G K +V   N++I  FC+
Sbjct: 297 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 356

Query: 181 NGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSL---EKPKEILVLFDRMIKYGVHPKMDT 240
             R K+ + +L +M  +   PN  + +   R L    +  E   +F +MIK    P  DT
Sbjct: 357 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADT 416

Query: 241 YVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMV 300
           Y M+++ F     +     VW  M + G  P+   ++ LI+ L E+     A    EEM+
Sbjct: 417 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 476

Query: 301 AKGLSP 303
             G+ P
Sbjct: 477 EMGIRP 479

[Close]
BLAST of Cucsa.105750 vs. NCBI nr
Match: gi|778728988|ref|XP_011659515.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis sativus])

HSP 1 Score: 682.9 bits (1761), Expect = 2.7e-193
Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS 60
           RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS
Sbjct: 126 RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS 185

Query: 61  STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 120
           STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY
Sbjct: 186 STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 245

Query: 121 KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 180
           KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN
Sbjct: 246 KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 305

Query: 181 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 240
           GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML
Sbjct: 306 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 365

Query: 241 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL 300
           LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL
Sbjct: 366 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL 425

Query: 301 SPKLRVELGTQMMNGGYHANVNCNK 326
           SPKLRVELGTQMMNGGYHANVNCNK
Sbjct: 426 SPKLRVELGTQMMNGGYHANVNCNK 450

[Close]
BLAST of Cucsa.105750 vs. NCBI nr
Match: gi|659122453|ref|XP_008461152.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucumis melo])

HSP 1 Score: 673.7 bits (1737), Expect = 1.6e-190
Identity = 318/325 (97.85%), Postives = 324/325 (99.69%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDS 60
           RYA AHLV+EAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNR+LDCDS
Sbjct: 126 RYAAAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRRLDCDS 185

Query: 61  STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 120
           STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY
Sbjct: 186 STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLY 245

Query: 121 KEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 180
           KEMK+KGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN
Sbjct: 246 KEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCEN 305

Query: 181 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVML 240
           GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEIL+LFDRMIKYGVHPKMDTYVML
Sbjct: 306 GRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILILFDRMIKYGVHPKMDTYVML 365

Query: 241 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL 300
           LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL
Sbjct: 366 LRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGL 425

Query: 301 SPKLRVELGTQMMNGGYHANVNCNK 326
           SPKLRVELGT+M+NGGYHANVNCNK
Sbjct: 426 SPKLRVELGTKMVNGGYHANVNCNK 450

[Close]
BLAST of Cucsa.105750 vs. NCBI nr
Match: gi|590615881|ref|XP_007023349.1| (Pentatricopeptide repeat (PPR) superfamily protein isoform 3 [Theobroma cacao])

HSP 1 Score: 503.4 bits (1295), Expect = 2.9e-139
Identity = 237/318 (74.53%), Postives = 273/318 (85.85%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCF-GKNRKLDCD 60
           RY  AHLV EAI+ ++RL EF L+DE SFCNL+DALCE +HV EAQELCF GK +++   
Sbjct: 40  RYITAHLVKEAISTFDRLEEFNLKDEISFCNLVDALCEYKHVIEAQELCFFGKIKEIGLS 99

Query: 61  -SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            + TKIHN+ILRGW KMGWWSKCR+FW+EMDKKGV+KDLHSYSIYMDI CKSGKPWKAVK
Sbjct: 100 VNDTKIHNMILRGWFKMGWWSKCREFWQEMDKKGVKKDLHSYSIYMDIMCKSGKPWKAVK 159

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMKKKGMKLDVVAYNTVI A+GISEG DF   VF EM+++GC+PNVVT NTVIKL C
Sbjct: 160 LYKEMKKKGMKLDVVAYNTVIRAIGISEGADFGVGVFREMRDLGCEPNVVTYNTVIKLLC 219

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           ENGR + A+ +LDQMLK+DC P+VITYHCFF  LEKP+EIL LFD MI  G+ P+MDTYV
Sbjct: 220 ENGRVRQAYAVLDQMLKKDCAPDVITYHCFFGCLEKPREILKLFDLMITNGIQPRMDTYV 279

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKFGRWGFLRPVF+VW KMEELG SPNE AYNALIDAL++KGM+DMARKYDEEM+ K
Sbjct: 280 MLMRKFGRWGFLRPVFMVWKKMEELGSSPNEFAYNALIDALIQKGMLDMARKYDEEMLEK 339

Query: 301 GLSPKLRVELGTQMMNGG 317
           GLS K R ELGT+++ GG
Sbjct: 340 GLSSKPREELGTKLVQGG 357

[Close]
BLAST of Cucsa.105750 vs. NCBI nr
Match: gi|590615877|ref|XP_007023348.1| (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 503.4 bits (1295), Expect = 2.9e-139
Identity = 237/318 (74.53%), Postives = 273/318 (85.85%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCF-GKNRKLDCD 60
           RY  AHLV EAI+ ++RL EF L+DE SFCNL+DALCE +HV EAQELCF GK +++   
Sbjct: 20  RYITAHLVKEAISTFDRLEEFNLKDEISFCNLVDALCEYKHVIEAQELCFFGKIKEIGLS 79

Query: 61  -SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVK 120
            + TKIHN+ILRGW KMGWWSKCR+FW+EMDKKGV+KDLHSYSIYMDI CKSGKPWKAVK
Sbjct: 80  VNDTKIHNMILRGWFKMGWWSKCREFWQEMDKKGVKKDLHSYSIYMDIMCKSGKPWKAVK 139

Query: 121 LYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFC 180
           LYKEMKKKGMKLDVVAYNTVI A+GISEG DF   VF EM+++GC+PNVVT NTVIKL C
Sbjct: 140 LYKEMKKKGMKLDVVAYNTVIRAIGISEGADFGVGVFREMRDLGCEPNVVTYNTVIKLLC 199

Query: 181 ENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYV 240
           ENGR + A+ +LDQMLK+DC P+VITYHCFF  LEKP+EIL LFD MI  G+ P+MDTYV
Sbjct: 200 ENGRVRQAYAVLDQMLKKDCAPDVITYHCFFGCLEKPREILKLFDLMITNGIQPRMDTYV 259

Query: 241 MLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAK 300
           ML+RKFGRWGFLRPVF+VW KMEELG SPNE AYNALIDAL++KGM+DMARKYDEEM+ K
Sbjct: 260 MLMRKFGRWGFLRPVFMVWKKMEELGSSPNEFAYNALIDALIQKGMLDMARKYDEEMLEK 319

Query: 301 GLSPKLRVELGTQMMNGG 317
           GLS K R ELGT+++ GG
Sbjct: 320 GLSSKPREELGTKLVQGG 337

[Close]
BLAST of Cucsa.105750 vs. NCBI nr
Match: gi|641822280|gb|KDO41814.1| (hypothetical protein CISIN_1g041804mg, partial [Citrus sinensis])

HSP 1 Score: 502.3 bits (1292), Expect = 6.4e-139
Identity = 233/321 (72.59%), Postives = 275/321 (85.67%), Query Frame = 1 

Query: 1   RYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCD- 60
           RY  AHLV+EA+  + +L EF L+DE S+CNL+DALCE +HV EAQELCFG+N+ +    
Sbjct: 76  RYVTAHLVNEAMGTFNKLDEFGLKDEVSYCNLVDALCEYKHVIEAQELCFGENKNVGFSG 135

Query: 61  ----SSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWK 120
               + TKI+N+ILRGW KM WW KCR+FWEEMDK+GV KDLHSYSIYMDI CKSGKPWK
Sbjct: 136 LVEMNKTKIYNMILRGWFKMSWWGKCREFWEEMDKRGVVKDLHSYSIYMDIMCKSGKPWK 195

Query: 121 AVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIK 180
           AVKLYKEMKKKG+K+DVVAYNTVI AVG+SEGVDFA RV+ EM+EMGC+P+VVTCNTVIK
Sbjct: 196 AVKLYKEMKKKGIKMDVVAYNTVIRAVGVSEGVDFAMRVYREMREMGCQPSVVTCNTVIK 255

Query: 181 LFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMD 240
           L CENGR ++A+ +L +M K+ C P+VITYHCFFR LEKP+EIL LFDRMI+ G+ PKMD
Sbjct: 256 LLCENGRVREAYAVLAEMPKKGCVPDVITYHCFFRCLEKPREILGLFDRMIESGIRPKMD 315

Query: 241 TYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEM 300
           TYVMLLRKFGRWGFLRPVF+VW KMEELGCSP+E AYNAL+DAL++KGM+DMARKYDEEM
Sbjct: 316 TYVMLLRKFGRWGFLRPVFVVWKKMEELGCSPDEFAYNALVDALIDKGMLDMARKYDEEM 375

Query: 301 VAKGLSPKLRVELGTQMMNGG 317
            AKGLS K R ELGT+++ GG
Sbjct: 376 FAKGLSAKPREELGTKLVQGG 396

The following BLAST results are available for this feature:
BLAST of Cucsa.105750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP136_ARATH1.1e-12267.42Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... [more]
PP383_ARATH3.0e-4334.52Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
PP233_ARATH1.6e-4132.15Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... [more]
PP125_ARATH2.5e-3431.29Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidop... [more]
PP129_ARATH4.4e-3129.74Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
BLAST of Cucsa.105750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBR1_CUCSA1.9e-193100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432170 PE=4 SV=1[more]
A0A061G8S5_THECC2.0e-13974.53Pentatricopeptide repeat (PPR) superfamily protein isoform 3 OS=Theobroma cacao ... [more]
A0A061G7W5_THECC2.0e-13974.53Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Theobroma cacao ... [more]
A0A067DFS1_CITSI4.5e-13972.59Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041804mg PE=4 S... [more]
A0A0D2UQZ2_GOSRA5.0e-13873.44Uncharacterized protein OS=Gossypium raimondii GN=B456_011G085200 PE=4 SV=1[more]
BLAST of Cucsa.105750 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80550.16.2e-12467.42 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G15010.11.7e-4434.52 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G15200.19.2e-4332.15 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G74900.15.4e-3530.36 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G77360.12.5e-3229.74 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Cucsa.105750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778728988|ref|XP_011659515.1|2.7e-193100.00PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial ... [more]
gi|659122453|ref|XP_008461152.1|1.6e-19097.85PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial ... [more]
gi|590615881|ref|XP_007023349.1|2.9e-13974.53Pentatricopeptide repeat (PPR) superfamily protein isoform 3 [Theobroma cacao][more]
gi|590615877|ref|XP_007023348.1|2.9e-13974.53Pentatricopeptide repeat (PPR) superfamily protein isoform 2 [Theobroma cacao][more]
gi|641822280|gb|KDO41814.1|6.4e-13972.59hypothetical protein CISIN_1g041804mg, partial [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105750.1Cucsa.105750.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 28..48
score: 0.28coord: 66..93
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 165..212
score: 1.3E-15coord: 95..141
score: 1.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 221..280
score: 2.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 99..132
score: 7.0E-5coord: 271..302
score: 2.9E-5coord: 133..167
score: 1.8E-5coord: 236..269
score: 4.4E-4coord: 64..95
score: 2.0E-4coord: 168..202
score: 7.2
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 268..302
score: 11.137coord: 96..130
score: 10.918coord: 166..200
score: 12.518coord: 25..60
score: 8.32coord: 131..165
score: 11.115coord: 233..267
score: 8.539coord: 61..95
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 163..294
score: 7.8E-6coord: 9..126
score: 7.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..303
score: 6.7E
NoneNo IPR availablePANTHERPTHR24015:SF812SUBFAMILY NOT NAMEDcoord: 1..303
score: 6.7E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105750Wax gourdcgywgoB161
Cucsa.105750Cucumber (Gy14) v1cgycgyB032
Cucsa.105750Cucumber (Gy14) v1cgycgyB053
Cucsa.105750Cucumber (Gy14) v1cgycgyB054
Cucsa.105750Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105750Cucurbita maxima (Rimu)cgycmaB0238
Cucsa.105750Cucurbita maxima (Rimu)cgycmaB0239
Cucsa.105750Cucurbita maxima (Rimu)cgycmaB0241
Cucsa.105750Cucurbita moschata (Rifu)cgycmoB0235
Cucsa.105750Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105750Cucurbita moschata (Rifu)cgycmoB0240
Cucsa.105750Wild cucumber (PI 183967)cgycpiB124
Cucsa.105750Wild cucumber (PI 183967)cgycpiB125
Cucsa.105750Wild cucumber (PI 183967)cgycpiB127
Cucsa.105750Cucumber (Chinese Long) v2cgycuB123
Cucsa.105750Cucumber (Chinese Long) v2cgycuB124
Cucsa.105750Cucumber (Chinese Long) v2cgycuB126
Cucsa.105750Melon (DHL92) v3.5.1cgymeB135
Cucsa.105750Melon (DHL92) v3.5.1cgymeB133
Cucsa.105750Watermelon (Charleston Gray)cgywcgB141
Cucsa.105750Watermelon (Charleston Gray)cgywcgB143
Cucsa.105750Watermelon (97103) v1cgywmB142
Cucsa.105750Watermelon (97103) v1cgywmB143
Cucsa.105750Watermelon (97103) v1cgywmB144
Cucsa.105750Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105750Cucurbita pepo (Zucchini)cgycpeB0230
Cucsa.105750Cucurbita pepo (Zucchini)cgycpeB0234
Cucsa.105750Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105750Bottle gourd (USVL1VR-Ls)cgylsiB134
Cucsa.105750Bottle gourd (USVL1VR-Ls)cgylsiB136
Cucsa.105750Melon (DHL92) v3.6.1cgymedB133
Cucsa.105750Melon (DHL92) v3.6.1cgymedB134
Cucsa.105750Melon (DHL92) v3.6.1cgymedB135
Cucsa.105750Silver-seed gourdcarcgyB0179
Cucsa.105750Silver-seed gourdcarcgyB1144
Cucsa.105750Cucumber (Chinese Long) v3cgycucB129
Cucsa.105750Cucumber (Chinese Long) v3cgycucB130
Cucsa.105750Cucumber (Chinese Long) v3cgycucB131
Cucsa.105750Watermelon (97103) v2cgywmbB138
Cucsa.105750Watermelon (97103) v2cgywmbB141