Cucsa.105500 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105500
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPost-illumination chlorophyll fluorescence increase
Locationscaffold00929 : 144762 .. 147743 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATCAAACTCTTTCAATCTTCATCTTTTTATCCACTTCAAATTGTGGCCTCAAACGACTCACTGAGCTTCATCTCTCTCTGAATCGGAGCTTTGAAGCTGTCATTAATGGCGGCAACCAACGCACCCATCTTTGCATCTTCCTTTCCAACTTCTCTCCCCATTACAACCCAACGCAGAGGAGAATCATGCCCACAATCTACTCGAACTTTAGGTGATTTTACTTTATTCTTAATCTACTATTTTCTCTTCTTGCTTTTGCTTATTTTAATTAACTCAATGGACTCTTGAGTAATGGGGAATTAGAACCCCAACTTTCTTGGTTTAGATTCATGATTGGAGGAATCCGATTCATGTTCTTGCTACTCCTATGAATTATGCAATCCTATGTTTAGACTTCGAATAAGCGATCTAAAGGAAATGGGGTATTAATGAATGTTGTTGATATTAATTGAAGAGGAAATGACAGTACAATGATTTTGTAGTTTCGAACCATTTTCTTGCCATGGTACTATTTTTCAAACCATGATTGAACCCAAACTCTAAAGTTTCTTTCTTTTCCTTTTTtCTTTTTTtAAAAACCAAACTCTAAAGTTTGATTGTTTAATCTTTTGAAAATATTTAACATATAGTTAATTGTAGATCTCTTGTAGATGAATCCAAACTAAAGCAATAAGTTTCGGCTCCATCTCATAACAATTTGGTTTTTtACTTTCCTATTTTAACTTATAAACACTACTTTGTTATTCGCTTTCTACCGATATTTTCAAAAACTAAACCAAAATTTGAAAACGATATAAGAAAATGAAAGGAAACAAGCACAATTATTATATTAAAACCAAAAATCGTAATAGTAGTTTTGTTTTAGTTTTTCAAGTTcAACTAAGAATTTAGATGTTTTCTCAAGAAATGTAAAAATTATAGTAAGAAATTTACACATAAATGTTGAAACAAAAAACTAAAATGAAATCATTATCAAATGGCTGGGATTCAGTGAGACTTGAATGgAAGAATGAAGAAcGTAGTGTTTTTAAGTTTAAGAAGGATTTTAATCAGCATCAACTAAAGGAAAGGAAGAAAGCTCGAGACTGACGGTACAATCATTTTACATCAGTTCCTTTGGTATTTATGATGCAGGTTCTGGTATCTCTGGTTCGTCGTTTTCGAAATGCCTTCCGAACAATAAAGATGTCAGATTTAGGACTGTGAGGAAGGTGAATGCTGCTGTGGCTGTTGAAGCATCTCCAGCAGAGGAAATGACAGAGTATGACTAAATCATTAACATTTCACTGTTGAGTTTTGGTAGCCTAAATTTTTCCCTTTGTTTATTGCAATCTTCTGAGAACCAATTAATTGAAGTTGTGATTCCTTTGcAAAaCTCTTcGTCAGGATCAAACTTCCATCTTGGACTTTGTTTGAACTTGGAAAGGCTCCGGTTTACTGGAAAACTGTGAACGGTCTACCCCCTACCGCAGTAAGcATAATACCACATGTTATGATTTGTTGCATATGTGTTTGTGGTTATAATCTGAGACTGCTTCATTGGGTTGCATAATTTGATAGGGGGAGAAGCTCAAGCTTTTTTATAATCCAGCTGCTACCAACCTGGCTCCAAACGACGATTTTGGGATTGCTTTTAATGGTAATACCTGATATGCAGTCTTGTATTCTGGTAGTTCATGTTCATgCCTTCATCAGTTTTTAGATGTAAAACCATCAGATTCATTGTTGTAGAAATGTCACCAGTAAACAgTAGGGAAAAATCAGATACTTGGATTAATTTTGAACTGTTATGAGCTTTCTTTTGAGTTATATAGCCCGCTGAAAGGACTTGAATTGACTTCCCCAAGCTGCAATTTGAGCTGATACTTAAATGTTTATTTGAACATTATGCTGCAGGAGGGTTTAATCAGCCAATAATGTGTGGTGGGGAGCCAAGGGCTATGCTTAGGAAAGATCGAGGCAAAGCTGATGGACCAATATACACCATCCAAATATGCATTCCGAAGCACGGTCGGTcGCGTTACGAGAATTTTATGCTTCTTTATCTTCACTGTTTCACTCCTTACCTCATTTTcTTTCCTGGCATTCCTCAGCTATAAACTTGATCTTCTCATTCACAAACGGTACCGATTGGGATGGTCCTTACAGACTGCAGTTTCAAGTTCCCAAGGCTTGGCAAAACAAACCAATCGACTTTTTCAATCAGGTAACAATATGATATTAAACATTTCAAATGATAAATCAATATTCACCACCATTTTCATTCTTTGTTTAGTATAGTGTAATAAGCAGAATCCGATTaTCATGTCACATGGTAGGGTCTAGCTGAAGAGTTGAGTAAAGAAGGTGCGTGTGACAGAGCGATATTTCCAGATACAAGCGTTGTTGTAACAAGATGTGCAATGATTGGCAATCTTACTGTGGAAGGGGTAAGGAAAAACTTTAATATAGAAACTTCTTTATCGTGCTAAATTCATCGTCTAGGCTACATCTAACAAGAATGGACTATAAATAACAATTGCAGGGTGACCGTTGTGATCTTAATCTTGTACTAGGCTGCACAGATCCTAGTTCGCACTTATTCAACCCACTTGCCAATGTAGATGATGGATCTTGTCCAATTGATACAGATACTGAGGACTAATCTACCTTCTCTCTGTTCTCTTGCACCTCATCGTTCATCGAATTCAcGTTGTATGAGGCACTGCAAAGGCATTTCTGCAAATGTAAGAAGTGTTGTTGGGCGGTATGGACATCATTTTTAGCCAAGCTGATTGTAGTCCATCCCATCAAGCAGAAAGCAATTTTGCATCTTCTATTGGTAGATGAAAAAACTAAAAaGTAACCCTACATCTATGTATATTTGTAAAGAAAAACTTCATTAATACGTAAAATTCAAATTGAAAGTTGTTTACTGTTAGGATTTTAATGGATAAATATATATACTATATATAAATCATCAATTTGCATTAACGCCAA

mRNA sequence

AAAATCAAACTCTTTCAATCTTCATCTTTTTATCCACTTCAAATTGTGGCCTCAAACGACTCACTGAGCTTCATCTCTCTCTGAATCGGAGCTTTGAAGCTGTCATTAATGGCGGCAACCAACGCACCCATCTTTGCATCTTCCTTTCCAACTTCTCTCCCCATTACAACCCAACGCAGAGGAGAATCATGCCCACAATCTACTCGAACTTTAGGTTCTGGTATCTCTGGTTCGTCGTTTTCGAAATGCCTTCCGAACAATAAAGATGTCAGATTTAGGACTGTGAGGAAGGTGAATGCTGCTGTGGCTGTTGAAGCATCTCCAGCAGAGGAAATGACAGAGATCAAACTTCCATCTTGGACTTTGTTTGAACTTGGAAAGGCTCCGGTTTACTGGAAAACTGTGAACGGTCTACCCCCTACCGCAGGGGAGAAGCTCAAGCTTTTTTATAATCCAGCTGCTACCAACCTGGCTCCAAACGACGATTTTGGGATTGCTTTTAATGGAGGGTTTAATCAGCCAATAATGTGTGGTGGGGAGCCAAGGGCTATGCTTAGGAAAGATCGAGGCAAAGCTGATGGACCAATATACACCATCCAAATATGCATTCCGAAGCACGCTATAAACTTGATCTTCTCATTCACAAACGGTACCGATTGGGATGGTCCTTACAGACTGCAGTTTCAAGTTCCCAAGGCTTGGCAAAACAAACCAATCGACTTTTTCAATCAGGGTCTAGCTGAAGAGTTGAGTAAAGAAGGTGCGTGTGACAGAGCGATATTTCCAGATACAAGCGTTGTTGTAACAAGATGTGCAATGATTGGCAATCTTACTGTGGAAGGGGGTGACCGTTGTGATCTTAATCTTGTACTAGGCTGCACAGATCCTAGTTCGCACTTATTCAACCCACTTGCCAATGTAGATGATGGATCTTGTCCAATTGATACAGATACTGAGGACTAATCTACCTTCTCTCTGTTCTCTTGCACCTCATCGTTCATCGAATTCACGTTGTATGAGGCACTGCAAAGGCATTTCTGCAAATGTAAGAAGTGTTGTTGGGCGGTATGGACATCATTTTTAGCCAAGCTGATTGTAGTCCATCCCATCAAGCAGAAAGCAATTTTGCATCTTCTATTGGTAGATGAAAAAACTAAAAAGTAACCCTACATCTATGTATATTTGTAAAGAAAAACTTCATTAATACGTAAAATTCAAATTGAAAGTTGTTTACTGTTAGGATTTTAATGGATAAATATATATACTATATATAAATCATCAATTTGCATTAACGCCAA

Coding sequence (CDS)

ATGGCGGCAACCAACGCACCCATCTTTGCATCTTCCTTTCCAACTTCTCTCCCCATTACAACCCAACGCAGAGGAGAATCATGCCCACAATCTACTCGAACTTTAGGTTCTGGTATCTCTGGTTCGTCGTTTTCGAAATGCCTTCCGAACAATAAAGATGTCAGATTTAGGACTGTGAGGAAGGTGAATGCTGCTGTGGCTGTTGAAGCATCTCCAGCAGAGGAAATGACAGAGATCAAACTTCCATCTTGGACTTTGTTTGAACTTGGAAAGGCTCCGGTTTACTGGAAAACTGTGAACGGTCTACCCCCTACCGCAGGGGAGAAGCTCAAGCTTTTTTATAATCCAGCTGCTACCAACCTGGCTCCAAACGACGATTTTGGGATTGCTTTTAATGGAGGGTTTAATCAGCCAATAATGTGTGGTGGGGAGCCAAGGGCTATGCTTAGGAAAGATCGAGGCAAAGCTGATGGACCAATATACACCATCCAAATATGCATTCCGAAGCACGCTATAAACTTGATCTTCTCATTCACAAACGGTACCGATTGGGATGGTCCTTACAGACTGCAGTTTCAAGTTCCCAAGGCTTGGCAAAACAAACCAATCGACTTTTTCAATCAGGGTCTAGCTGAAGAGTTGAGTAAAGAAGGTGCGTGTGACAGAGCGATATTTCCAGATACAAGCGTTGTTGTAACAAGATGTGCAATGATTGGCAATCTTACTGTGGAAGGGGGTGACCGTTGTGATCTTAATCTTGTACTAGGCTGCACAGATCCTAGTTCGCACTTATTCAACCCACTTGCCAATGTAGATGATGGATCTTGTCCAATTGATACAGATACTGAGGACTAA

Protein sequence

MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVRKVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATNLAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTNGTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGNLTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED*
Homology
[Close]
BLAST of Cucsa.105500 vs. TrEMBL
Match: A0A0A0K6Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432450 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 8.4e-166
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR
Sbjct: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN
Sbjct: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN
Sbjct: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN
Sbjct: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED
Sbjct: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 284

[Close]
BLAST of Cucsa.105500 vs. TrEMBL
Match: W9RC44_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025772 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 3.9e-115
Identity = 203/283 (71.73%), Postives = 229/283 (80.92%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAATN  IF SS  T L + +    ++       L S   GSS S+  P+ K    +   
Sbjct: 1   MAATNGSIFPSSAQTFLALRSISSNKATHLVPTPLASNFLGSSLSRS-PSEKKKVVKISG 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KV  A+AV  SP EE+ E  LPSW +FELGKAPVYWKT+NGLPPT+GE+LK+FYNPAATN
Sbjct: 61  KVCVAMAVATSPGEEIKEFTLPSWAMFELGKAPVYWKTMNGLPPTSGERLKIFYNPAATN 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
            APND+FGIAFNGGFNQPIMCGGEPRAM +K RGKAD PIY+IQICIPKHA+ LIFSFTN
Sbjct: 121 FAPNDEFGIAFNGGFNQPIMCGGEPRAMRKKSRGKADSPIYSIQICIPKHALKLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           G DWDGPYR+QFQVPK+WQNKPI+FFN+GLAEELSKEGACDRAIFPD S+VVTRCAMIGN
Sbjct: 181 GVDWDGPYRMQFQVPKSWQNKPIEFFNEGLAEELSKEGACDRAIFPDASIVVTRCAMIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTE 284
           L+VEGGDRC+LNLV GCTDPSS  +NPLANVDDGSCPIDTD E
Sbjct: 241 LSVEGGDRCNLNLVPGCTDPSSPFYNPLANVDDGSCPIDTDDE 282

[Close]
BLAST of Cucsa.105500 vs. TrEMBL
Match: D7U138_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06980 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.1e-112
Identity = 197/284 (69.37%), Postives = 230/284 (80.99%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAAT   IFASS      +T+       P     L S   G+S    LP    V  +   
Sbjct: 1   MAATTGSIFASSTQRFPTVTSVSGTNGSPSVAGRLASNFMGASLRSRLPKMGKV-VKVTG 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KV+AA AV  +P EE  E+KLPSW +FELG+APVYWKT+NGLPP++GEKLKLFYNP A+ 
Sbjct: 61  KVSAA-AVATTPVEETKEVKLPSWAMFELGRAPVYWKTMNGLPPSSGEKLKLFYNPVASK 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           L PN+DFGI FNGGFNQPIMCGGEPRAML+K RGKAD PIYTIQICIPKHA+NLIFSFTN
Sbjct: 121 LVPNEDFGIGFNGGFNQPIMCGGEPRAMLKKARGKADRPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           GT+WDGPY+LQFQVPKAW+NKPI+FFNQGLAEELSKEGACD+AIFPDT++V+ RCA+IGN
Sbjct: 181 GTEWDGPYKLQFQVPKAWRNKPIEFFNQGLAEELSKEGACDKAIFPDTNIVIDRCALIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           LT+EGGDRC+L+ V+GCTDPSS L+NPLANVDDGSCPI++D+ED
Sbjct: 241 LTLEGGDRCNLDFVIGCTDPSSPLYNPLANVDDGSCPIESDSED 282

[Close]
BLAST of Cucsa.105500 vs. TrEMBL
Match: A0A151SGV1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_000227 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 5.3e-112
Identity = 202/285 (70.88%), Postives = 232/285 (81.40%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKC-LPNNKDVRFRTV 60
           MAATNA IFASS    LP+         P  + TL S     S  +C L   + V+F   
Sbjct: 1   MAATNASIFASSTQPCLPVP--------PSISNTLASPFLNVSLPRCYLDKKRHVKFS-- 60

Query: 61  RKVNAA-VAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAA 120
           +K++AA VA   +  EE+ E KLPSW +FE+G+APVYWKT+NGLPPT+GEKLKLFYNP A
Sbjct: 61  QKISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDA 120

Query: 121 TNLAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSF 180
             LAP+++FGIAFNGGFNQPIMCGGEPRAMLRKDRGKAD PIYTIQICIPKHA+NLIFSF
Sbjct: 121 AQLAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSF 180

Query: 181 TNGTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMI 240
           TNG DWDGPYRLQFQVPK +QNK IDFFN+GLAEELSKEGAC++AIFPDT+ V+TRCAMI
Sbjct: 181 TNGVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMI 240

Query: 241 GNLTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTE 284
           GNL+ EGGDRC+LNLV GCTDPSSHL+NPLANVDDG+CPID D+E
Sbjct: 241 GNLSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSE 275

[Close]
BLAST of Cucsa.105500 vs. TrEMBL
Match: I3SFH5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 7.0e-112
Identity = 199/283 (70.32%), Postives = 230/283 (81.27%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAATNA IFASS  T+ P    R          TL S     S  +C    K+   +  R
Sbjct: 1   MAATNASIFASS--TTQPCLPIR-------IPNTLASTFLNVSLPRCYLV-KERNVKVTR 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
            +NAAVAV  +PA+E+ E K+PSW  FELGKA VYWKT+NGLPPT+GEKLKLFYNP +T 
Sbjct: 61  TINAAVAVATTPAQEIEEYKIPSWANFELGKASVYWKTMNGLPPTSGEKLKLFYNPTSTQ 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           LAPN++FGIAFNGGFNQPIMCGGEPRAMLRKDRGKAD PIY+IQIC+PKHA+NLIFSFTN
Sbjct: 121 LAPNEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYSIQICVPKHALNLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           G DWDGPYRLQFQVPK  QNKPI+FFN+GLAEEL KEGAC++AIFPD++ V+T+CAM+GN
Sbjct: 181 GVDWDGPYRLQFQVPKVLQNKPIEFFNEGLAEELGKEGACEQAIFPDSNKVITKCAMLGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTE 284
           LTVEGGDRCDLNLV GCTDPSSHL+NPLANVDDG+CP+D D++
Sbjct: 241 LTVEGGDRCDLNLVEGCTDPSSHLYNPLANVDDGTCPLDLDSD 273

[Close]
BLAST of Cucsa.105500 vs. TAIR10
Match: AT3G15840.1 (AT3G15840.1 post-illumination chlorophyll fluorescence increase)

HSP 1 Score: 371.3 bits (952), Expect = 5.3e-103
Identity = 167/220 (75.91%), Postives = 192/220 (87.27%), Query Frame = 1 

Query: 65  AVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATNLAPN 124
           AVA   +P EE+ E KLPSW +FE+G APVYWKT+NGLPPT+GEKLKLFYNPAA+ L  N
Sbjct: 48  AVATTLAPLEEIKEYKLPSWAMFEMGTAPVYWKTMNGLPPTSGEKLKLFYNPAASKLTLN 107

Query: 125 DDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTNGTDW 184
           +D+G+AFNGGFNQPIMCGGEPRAML+KDRGKAD PIYT+QICIPKHA+NLIFSFTNG DW
Sbjct: 108 EDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKADSPIYTMQICIPKHAVNLIFSFTNGVDW 167

Query: 185 DGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGNLTVE 244
           DGPYRLQFQVPK WQNKPI+FFN+GLA ELS++GAC+RAIFPD++VV TRC MI NLTVE
Sbjct: 168 DGPYRLQFQVPKRWQNKPIEFFNEGLANELSQDGACERAIFPDSNVVPTRCTMIANLTVE 227

Query: 245 GGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           GGDRC+L+LV GC D +S  FNP ANVDDGSCP++    D
Sbjct: 228 GGDRCNLDLVPGCMDTNSEHFNPYANVDDGSCPLELSDSD 267

[Close]
BLAST of Cucsa.105500 vs. NCBI nr
Match: gi|449436138|ref|XP_004135851.1| (PREDICTED: uncharacterized protein LOC101207565 [Cucumis sativus])

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-165
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR
Sbjct: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN
Sbjct: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN
Sbjct: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN
Sbjct: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED
Sbjct: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 284

[Close]
BLAST of Cucsa.105500 vs. NCBI nr
Match: gi|659122407|ref|XP_008461127.1| (PREDICTED: uncharacterized protein LOC103499808 [Cucumis melo])

HSP 1 Score: 560.1 bits (1442), Expect = 2.3e-156
Identity = 269/284 (94.72%), Postives = 274/284 (96.48%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAATNAPIFASSF TSLPI TQRRGESCPQSTRTLGS  SGSS  KCLPNN  VRFRTVR
Sbjct: 1   MAATNAPIFASSFQTSLPIRTQRRGESCPQSTRTLGSNFSGSSSPKCLPNN--VRFRTVR 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KVNAAVAVEASP EEMTEIKLPSW LFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN
Sbjct: 61  KVNAAVAVEASPTEEMTEIKLPSWALFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           LAPN+DFGIAFNGGFNQPIMCGGEPRAML+KDRGKADGPIYTIQICIPKHA+NLIFSFTN
Sbjct: 121 LAPNEDFGIAFNGGFNQPIMCGGEPRAMLKKDRGKADGPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTS+V+TRCAMIGN
Sbjct: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSIVITRCAMIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED
Sbjct: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 282

[Close]
BLAST of Cucsa.105500 vs. NCBI nr
Match: gi|1009112914|ref|XP_015870740.1| (PREDICTED: uncharacterized protein LOC107407915 [Ziziphus jujuba])

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 199/284 (70.07%), Postives = 236/284 (83.10%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAA+N  IFASS        +  R +  P  + +LGS   GSS    L   K V  +   
Sbjct: 1   MAASNGSIFASSAQPFSATRSLTRNKIAPPVSSSLGSNFKGSSLPSSLKQKKKV-VKISG 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KV+AA AVE SPAEE+ E  LP+W +FELG++PVYWKT+NGLPPT+GEK+++FYNPAA N
Sbjct: 61  KVSAAAAVETSPAEEIKEFTLPTWAMFELGRSPVYWKTMNGLPPTSGEKVRIFYNPAANN 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           L PND+FGIAFNGGFNQPIMCGGEPRAML+K RGKAD PIY+IQIC+PKHA+NLIFSFTN
Sbjct: 121 LVPNDEFGIAFNGGFNQPIMCGGEPRAMLKKVRGKADSPIYSIQICVPKHALNLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           G DWDGPYRLQFQVP+AWQNKPI+FFN+GL EELSK+GAC+RAIFPDT++VVTRCAMIGN
Sbjct: 181 GVDWDGPYRLQFQVPRAWQNKPIEFFNEGLTEELSKDGACERAIFPDTNIVVTRCAMIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           L++EGGDRC+L+LV+GCTDPSS L+NPLANVDDG+C IDTD+ED
Sbjct: 241 LSLEGGDRCNLDLVVGCTDPSSPLYNPLANVDDGTCLIDTDSED 283

[Close]
BLAST of Cucsa.105500 vs. NCBI nr
Match: gi|703101571|ref|XP_010097223.1| (hypothetical protein L484_025772 [Morus notabilis])

HSP 1 Score: 422.5 bits (1085), Expect = 5.7e-115
Identity = 203/283 (71.73%), Postives = 229/283 (80.92%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAATN  IF SS  T L + +    ++       L S   GSS S+  P+ K    +   
Sbjct: 1   MAATNGSIFPSSAQTFLALRSISSNKATHLVPTPLASNFLGSSLSRS-PSEKKKVVKISG 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KV  A+AV  SP EE+ E  LPSW +FELGKAPVYWKT+NGLPPT+GE+LK+FYNPAATN
Sbjct: 61  KVCVAMAVATSPGEEIKEFTLPSWAMFELGKAPVYWKTMNGLPPTSGERLKIFYNPAATN 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
            APND+FGIAFNGGFNQPIMCGGEPRAM +K RGKAD PIY+IQICIPKHA+ LIFSFTN
Sbjct: 121 FAPNDEFGIAFNGGFNQPIMCGGEPRAMRKKSRGKADSPIYSIQICIPKHALKLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           G DWDGPYR+QFQVPK+WQNKPI+FFN+GLAEELSKEGACDRAIFPD S+VVTRCAMIGN
Sbjct: 181 GVDWDGPYRMQFQVPKSWQNKPIEFFNEGLAEELSKEGACDRAIFPDASIVVTRCAMIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTE 284
           L+VEGGDRC+LNLV GCTDPSS  +NPLANVDDGSCPIDTD E
Sbjct: 241 LSVEGGDRCNLNLVPGCTDPSSPFYNPLANVDDGSCPIDTDDE 282

[Close]
BLAST of Cucsa.105500 vs. NCBI nr
Match: gi|225442943|ref|XP_002266165.1| (PREDICTED: uncharacterized protein PIFI [Vitis vinifera])

HSP 1 Score: 414.5 bits (1064), Expect = 1.5e-112
Identity = 197/284 (69.37%), Postives = 230/284 (80.99%), Query Frame = 1 

Query: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60
           MAAT   IFASS      +T+       P     L S   G+S    LP    V  +   
Sbjct: 1   MAATTGSIFASSTQRFPTVTSVSGTNGSPSVAGRLASNFMGASLRSRLPKMGKV-VKVTG 60

Query: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120
           KV+AA AV  +P EE  E+KLPSW +FELG+APVYWKT+NGLPP++GEKLKLFYNP A+ 
Sbjct: 61  KVSAA-AVATTPVEETKEVKLPSWAMFELGRAPVYWKTMNGLPPSSGEKLKLFYNPVASK 120

Query: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180
           L PN+DFGI FNGGFNQPIMCGGEPRAML+K RGKAD PIYTIQICIPKHA+NLIFSFTN
Sbjct: 121 LVPNEDFGIGFNGGFNQPIMCGGEPRAMLKKARGKADRPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240
           GT+WDGPY+LQFQVPKAW+NKPI+FFNQGLAEELSKEGACD+AIFPDT++V+ RCA+IGN
Sbjct: 181 GTEWDGPYKLQFQVPKAWRNKPIEFFNQGLAEELSKEGACDKAIFPDTNIVIDRCALIGN 240

Query: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 285
           LT+EGGDRC+L+ V+GCTDPSS L+NPLANVDDGSCPI++D+ED
Sbjct: 241 LTLEGGDRCNLDFVIGCTDPSSPLYNPLANVDDGSCPIESDSED 282

The following BLAST results are available for this feature:
BLAST of Cucsa.105500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6Y0_CUCSA8.4e-166100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432450 PE=4 SV=1[more]
W9RC44_9ROSA3.9e-11571.73Uncharacterized protein OS=Morus notabilis GN=L484_025772 PE=4 SV=1[more]
D7U138_VITVI1.1e-11269.37Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06980 PE=4 SV=... [more]
A0A151SGV1_CAJCA5.3e-11270.88Uncharacterized protein OS=Cajanus cajan GN=KK1_000227 PE=4 SV=1[more]
I3SFH5_LOTJA7.0e-11270.32Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of Cucsa.105500 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15840.15.3e-10375.91 post-illumination chlorophyll fluorescence increase[more]
BLAST of Cucsa.105500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436138|ref|XP_004135851.1|1.2e-165100.00PREDICTED: uncharacterized protein LOC101207565 [Cucumis sativus][more]
gi|659122407|ref|XP_008461127.1|2.3e-15694.72PREDICTED: uncharacterized protein LOC103499808 [Cucumis melo][more]
gi|1009112914|ref|XP_015870740.1|1.1e-11570.07PREDICTED: uncharacterized protein LOC107407915 [Ziziphus jujuba][more]
gi|703101571|ref|XP_010097223.1|5.7e-11571.73hypothetical protein L484_025772 [Morus notabilis][more]
gi|225442943|ref|XP_002266165.1|1.5e-11269.37PREDICTED: uncharacterized protein PIFI [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010478 chlororespiration
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0044424 intracellular part
cellular_component GO:0009579 thylakoid
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105500.1Cucsa.105500.1mRNA
Cucsa.105500.2Cucsa.105500.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32429FAMILY NOT NAMEDcoord: 74..167
score: 2.5
NoneNo IPR availablePANTHERPTHR32429:SF9POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE PROTEINcoord: 74..167
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.105500Cla015356Watermelon (97103) v1cgywmB142
Cucsa.105500Csa7G432450Cucumber (Chinese Long) v2cgycuB126
Cucsa.105500MELO3C023426Melon (DHL92) v3.5.1cgymeB133
Cucsa.105500ClCG09G002940Watermelon (Charleston Gray)cgywcgB141
Cucsa.105500CSPI07G20490Wild cucumber (PI 183967)cgycpiB127
Cucsa.105500CmaCh17G008650Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105500CmoCh17G008340Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105500Lsi02G027050Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105500Cp4.1LG12g07620Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105500MELO3C023426.2Melon (DHL92) v3.6.1cgymedB133
Cucsa.105500CsaV3_7G032330Cucumber (Chinese Long) v3cgycucB131
Cucsa.105500Cla97C09G165160Watermelon (97103) v2cgywmbB141
Cucsa.105500Bhi09G000012Wax gourdcgywgoB162
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105500Cucurbita moschata (Rifu)cgycmoB0235
Cucsa.105500Cucurbita moschata (Rifu)cgycmoB0240
Cucsa.105500Wild cucumber (PI 183967)cgycpiB124
Cucsa.105500Wild cucumber (PI 183967)cgycpiB125
Cucsa.105500Cucumber (Chinese Long) v2cgycuB123
Cucsa.105500Cucumber (Chinese Long) v2cgycuB124
Cucsa.105500Melon (DHL92) v3.5.1cgymeB135
Cucsa.105500Watermelon (Charleston Gray)cgywcgB143
Cucsa.105500Watermelon (97103) v1cgywmB143
Cucsa.105500Watermelon (97103) v1cgywmB144
Cucsa.105500Cucurbita pepo (Zucchini)cgycpeB0230
Cucsa.105500Cucurbita pepo (Zucchini)cgycpeB0234
Cucsa.105500Bottle gourd (USVL1VR-Ls)cgylsiB134
Cucsa.105500Bottle gourd (USVL1VR-Ls)cgylsiB136
Cucsa.105500Melon (DHL92) v3.6.1cgymedB135
Cucsa.105500Silver-seed gourdcarcgyB0179
Cucsa.105500Silver-seed gourdcarcgyB0238
Cucsa.105500Silver-seed gourdcarcgyB1144
Cucsa.105500Cucumber (Chinese Long) v3cgycucB129
Cucsa.105500Watermelon (97103) v2cgywmbB138
Cucsa.105500Cucumber (Gy14) v1cgycgyB032
Cucsa.105500Cucumber (Gy14) v1cgycgyB053
Cucsa.105500Cucurbita maxima (Rimu)cgycmaB0238
Cucsa.105500Cucurbita maxima (Rimu)cgycmaB0239
Cucsa.105500Cucurbita maxima (Rimu)cgycmaB0241