CmaCh17G008650 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh17G008650
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPost-illumination chlorophyll fluorescence increase
LocationCma_Chr17 : 6649373 .. 6652587 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGTGTTTATAAATCATTTCTTCCATCTTCTCTACTTTTTATCCGCTTCAATTCTGGCCTCAAATATCCCATTGAGCTTCATCTCTCTCTGAATCGAAGCTCTGAAGCTGTCGATAATGGCGGCAACAAACACACCCATCTATGCATCTTCCTTGCAAACTTCTCCTGCCATAAGAACCCAACGCAGAGGAGAATCATGCCCACAATCTACTCGAAATCAGGGTAACTAAATTCCTAATCTGCTACTTCTTTTTGCTTCATCCCATTCCATGGATTCTTAGGTAAATGGGGAATTCGTATCCAACTTTTAACATTTGTAGTTCCAAGATTGGGGAATCTGATTCATGTTCTTTGTACTCATCTGAATTATTCAATGCAAAAATCGGCTATGCTTAGACCTCGAATAAGCGATTAATTGAATGATTCTTGTTTTACCACTTTCTGTAGTGTACTTCTTAGAATATAATAGCAGCGATTGTTCAACGGATGTGTTAAACCCTAAACCACCATTGAACTCAAAAGCTTAATCTTATGGTTACTGTAAATTTGATATCAATATTTGATGTTTCCCACACTTGCTGGATGTTTGTATACATCATATTACAGGAGTTAAAATACAGAATGTCTTGCTATTGTATTGTTTTCAAGTTCAAGAAGGAGTTTAATCAAAACTTGATTCAGAAGAGGAAGAAATCATTTTGCATTCAGTTCCTTCACTCCTTCTTGAGCAGGTTCTAATTTCTTCGGTTCGTCGTTACCACGAGGCATTTTGAAGAAGAAGGATGTCGGAATTAGAACGGTCAGGAAGGTGATTGCTGCTGTGGCTGTTGAAGCATCTCCAACAGAGGGAATGAAAGAGTATGAGTAAATCTATAATGTTTCACAGTTGAGTCTGTGTGTAGCAGGCATTGAATGAGATAAATGATGAGAATGATCATATAATGTTCCGTTGTTCTTAGCATTTTTTTCATTGAAATCCATCGGTTTAGTTATTGCAATCTTCTAAGGACTGATGATTTGAAGTTGTGGTGTTTTTGCAAACTGTTTGTCAGGATTAAACTTCCGTCTTGGGCTTTGTTTGAGCTCGGACGGGCGCCGGTGTACTGGAAAACTGTGAATGGTCTACCTCCGACTTCAGTAAGAATAATAGCTCATGTAATGATTTAATGTGTTTGTTGGTTCTTGTTGGTTATAATCTGAGAAGGCTGCATTGGTTCTATGATTTGATAGGGTGAGAAGCTCAAGCTTTTCTATAATCCAGCTGCGACCAATCTGGTTCCAAATGATGATTTTGGGATTGCTTTTAATGGTAATTCCCTGATATCCATTATTCTGTTATGATAGCTCAAGTCCGTGCCTTTGTCGATTTTCTGTTGCGAAACCATCAGAGTCTATAACAGCTCAAGCCCACAGCTACTAGATATTGTCCTCTTGGGGCTTTCCTTTCAAGGTTTTAAAATGCATATGTTAGGGAGAGGTTTCCACCTTTATGAGGAATGTTTCGTTCCCCTGTCCAACCGATGTGAAATCTCACAATTCACCTCGCTTGGGGGCCGCTGACACACTTGGGGCTTTCCCTTCAAGGTTTTAAAATGCATATGTCAGGGAGAGGTTTCCACACCTTTATGAGGAATGTTTCGTTCCCCTGTCCAACCGATGTGGAATCTCACGGCCGTTGACACACTACCCGGTGTCTAACTCTGATACCATTTGTAATGGCCCAAGTCCGCCGCTAGCAGATATTATCTTCTTTGGCTTTTCCTTCATAGGCTTCCTCTCAAGGTTTTAAAATGAATATACTAAGAAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCTCTCTCCAACCAATGTGAGATCTCATAAATTCAATGATGTAATATGTCAAAGGAAACAAAACATGCTCCCACACAAGGAAAAGAACTAGTTACTTGGATTAATTTTGAATCGTTATGAGTTTTTGTTGGCTTTACCTCGTAAAATCCGGGTTTTGATCATCACTACTAATGATTGAAGTCTGTAATGCTTGTGAGTTATATAGCAGGCTAGGAGGACTTGCATCAACTTCCTCATTTTCTTTGAAGCTGTAATATGAGCTGATTTTTTATTGATGAATTGAACATGATGGTTGCAGGAGGCTTCAATCAGCCAATAATGTGTGGTGGGGAGCCAAGGGCAATGCTCAGGAAAGACCGAGGCAAAGCTGATGGACCGATATACACCATCCAAATATGCGTTCCGAAGCACGGTCGGTTGCACTGCGAGAACTGTAACTCACTTTATCCTCACTGTTTCATTTTTCTTTGCCTCATTTACTTTCCTGGCCTTCCACAGCTATAAACTTGATCTTCTCATTCACGAACGGGGTCGATTGGGATGGTCCTTACAGACTGCAGTTTCAAGTTCCCAAGCCTTGGCAAAACAAACCAATCGACTTTTTCAATCAGGTATAGGAAACGCTTCAAATTATAAGTTGATCTCTACATTTTCGTGCCATGTTTAGCATTACGCAATAAGAATCCAATTCTCATGTCGGTAGGGTCTAGCCGAAGAGTTGAGCAAAGAAGGTGCGTGTGACAGAGCGATATTTCCCGATACAAACATTGTTATAACAAGATGTGCAATGATTGGTAATCTTAATGTAGAAGGGGTAAGGAAAGTTTTAGTATAGAATACTCATAATCATCATTCTTGAAGTTTAGGCTGCAACTAATGAGTTTGATACCCACAGGGCGACCGTTGTGAACTCGATCTTGTACTAGGCTGCACAGATCCTAGCTCACATTTATTCAACCCATATGCCAATGTAGATGATGGATCTTGTCCTATCGACACAGATACCGAGGACTAGTTCGTTTTGCTTGCACCTCATTGTGGTCGAATTCAAGTCATACTGAGTCATCTCAAAGATTTTTCTGTAATATAAGAAATCTCATTAGAGAGCGGTTTCTATGTTATTTTAGCCGAGCGTATCGCTGGCCACCCCCGTCAAGCAGGAAGCAACTTCACATGGTAGATGAAAAAACCTTTCCGGCTGTGTATAGTTTATAAAAGAAAAAACATGGATACATAAATTCAAATTGATTGTTATACTGTTAGCGTACAACAACACATGATTTACCTATAGTTCCTCAAATTGTTCTAATTCAAATACAGTGGAAGCTTCATAAGAGCTTACCATTTTTTCTCTTGTGAGAGGGAAAGGGAGG

mRNA sequence

ATTTGTGTTTATAAATCATTTCTTCCATCTTCTCTACTTTTTATCCGCTTCAATTCTGGCCTCAAATATCCCATTGAGCTTCATCTCTCTCTGAATCGAAGCTCTGAAGCTGTCGATAATGGCGGCAACAAACACACCCATCTATGCATCTTCCTTGCAAACTTCTCCTGCCATAAGAACCCAACGCAGAGGAGAATCATGCCCACAATCTACTCGAAATCAGGGTTCTAATTTCTTCGGTTCGTCGTTACCACGAGGCATTTTGAAGAAGAAGGATGTCGGAATTAGAACGGTCAGGAAGGTGATTGCTGCTGTGGCTGTTGAAGCATCTCCAACAGAGGGAATGAAAGAGATTAAACTTCCGTCTTGGGCTTTGTTTGAGCTCGGACGGGCGCCGGTGTACTGGAAAACTGTGAATGGTCTACCTCCGACTTCAGGTGAGAAGCTCAAGCTTTTCTATAATCCAGCTGCGACCAATCTGGTTCCAAATGATGATTTTGGGATTGCTTTTAATGGAGGCTTCAATCAGCCAATAATGTGTGGTGGGGAGCCAAGGGCAATGCTCAGGAAAGACCGAGGCAAAGCTGATGGACCGATATACACCATCCAAATATGCGTTCCGAAGCACGCTATAAACTTGATCTTCTCATTCACGAACGGGGTCGATTGGGATGGTCCTTACAGACTGCAGTTTCAAGTTCCCAAGCCTTGGCAAAACAAACCAATCGACTTTTTCAATCAGGGTCTAGCCGAAGAGTTGAGCAAAGAAGGTGCGTGTGACAGAGCGATATTTCCCGATACAAACATTGTTATAACAAGATGTGCAATGATTGGTAATCTTAATGTAGAAGGGGGCGACCGTTGTGAACTCGATCTTGTACTAGGCTGCACAGATCCTAGCTCACATTTATTCAACCCATATGCCAATGTAGATGATGGATCTTGTCCTATCGACACAGATACCGAGGACTAGTTCGTTTTGCTTGCACCTCATTGTGGTCGAATTCAAGTCATACTGAGTCATCTCAAAGATTTTTCTGTAATATAAGAAATCTCATTAGAGAGCGGTTTCTATGTTATTTTAGCCGAGCGTATCGCTGGCCACCCCCGTCAAGCAGGAAGCAACTTCACATGGTAGATGAAAAAACCTTTCCGGCTGTGTATAGTTTATAAAAGAAAAAACATGGATACATAAATTCAAATTGATTGTTATACTGTTAGCGTACAACAACACATGATTTACCTATAGTTCCTCAAATTGTTCTAATTCAAATACAGTGGAAGCTTCATAAGAGCTTACCATTTTTTCTCTTGTGAGAGGGAAAGGGAGG

Coding sequence (CDS)

ATGGCGGCAACAAACACACCCATCTATGCATCTTCCTTGCAAACTTCTCCTGCCATAAGAACCCAACGCAGAGGAGAATCATGCCCACAATCTACTCGAAATCAGGGTTCTAATTTCTTCGGTTCGTCGTTACCACGAGGCATTTTGAAGAAGAAGGATGTCGGAATTAGAACGGTCAGGAAGGTGATTGCTGCTGTGGCTGTTGAAGCATCTCCAACAGAGGGAATGAAAGAGATTAAACTTCCGTCTTGGGCTTTGTTTGAGCTCGGACGGGCGCCGGTGTACTGGAAAACTGTGAATGGTCTACCTCCGACTTCAGGTGAGAAGCTCAAGCTTTTCTATAATCCAGCTGCGACCAATCTGGTTCCAAATGATGATTTTGGGATTGCTTTTAATGGAGGCTTCAATCAGCCAATAATGTGTGGTGGGGAGCCAAGGGCAATGCTCAGGAAAGACCGAGGCAAAGCTGATGGACCGATATACACCATCCAAATATGCGTTCCGAAGCACGCTATAAACTTGATCTTCTCATTCACGAACGGGGTCGATTGGGATGGTCCTTACAGACTGCAGTTTCAAGTTCCCAAGCCTTGGCAAAACAAACCAATCGACTTTTTCAATCAGGGTCTAGCCGAAGAGTTGAGCAAAGAAGGTGCGTGTGACAGAGCGATATTTCCCGATACAAACATTGTTATAACAAGATGTGCAATGATTGGTAATCTTAATGTAGAAGGGGGCGACCGTTGTGAACTCGATCTTGTACTAGGCTGCACAGATCCTAGCTCACATTTATTCAACCCATATGCCAATGTAGATGATGGATCTTGTCCTATCGACACAGATACCGAGGACTAG

Protein sequence

MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVRKVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATNLVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTNGVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGNLNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED
Homology
[Close]
BLAST of CmaCh17G008650 vs. TrEMBL
Match: A0A0A0K6Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432450 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 4.5e-143
Identity = 244/284 (85.92%), Postives = 255/284 (89.79%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAATN PI+ASS  TS  I TQRRGESCPQSTR  GS   GSS  + +   KDV  RTVR
Sbjct: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV AAVAVEASP E M EIKLPSW LFELG+APVYWKTVNGLPPT+GEKLKLFYNPAATN
Sbjct: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           L PNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQIC+PKHAINLIFSFTN
Sbjct: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           G DWDGPYRLQFQVPK WQNKPIDFFNQGLAEELSKEGACDRAIFPDT++V+TRCAMIGN
Sbjct: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           L VEGGDRC+L+LVLGCTDPSSHLFNP ANVDDGSCPIDTDTED
Sbjct: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 284

[Close]
BLAST of CmaCh17G008650 vs. TrEMBL
Match: W9RC44_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025772 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.1e-117
Identity = 204/283 (72.08%), Postives = 232/283 (81.98%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAATN  I+ SS QT  A+R+    ++         SNF GSSL R   +KK V ++   
Sbjct: 1   MAATNGSIFPSSAQTFLALRSISSNKATHLVPTPLASNFLGSSLSRSPSEKKKV-VKISG 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV  A+AV  SP E +KE  LPSWA+FELG+APVYWKT+NGLPPTSGE+LK+FYNPAATN
Sbjct: 61  KVCVAMAVATSPGEEIKEFTLPSWAMFELGKAPVYWKTMNGLPPTSGERLKIFYNPAATN 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
             PND+FGIAFNGGFNQPIMCGGEPRAM +K RGKAD PIY+IQIC+PKHA+ LIFSFTN
Sbjct: 121 FAPNDEFGIAFNGGFNQPIMCGGEPRAMRKKSRGKADSPIYSIQICIPKHALKLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           GVDWDGPYR+QFQVPK WQNKPI+FFN+GLAEELSKEGACDRAIFPD +IV+TRCAMIGN
Sbjct: 181 GVDWDGPYRMQFQVPKSWQNKPIEFFNEGLAEELSKEGACDRAIFPDASIVVTRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTE 284
           L+VEGGDRC L+LV GCTDPSS  +NP ANVDDGSCPIDTD E
Sbjct: 241 LSVEGGDRCNLNLVPGCTDPSSPFYNPLANVDDGSCPIDTDDE 282

[Close]
BLAST of CmaCh17G008650 vs. TrEMBL
Match: D7U138_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06980 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.6e-116
Identity = 202/284 (71.13%), Postives = 230/284 (80.99%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAAT   I+ASS Q  P + +       P       SNF G+SL R  L K    ++   
Sbjct: 1   MAATTGSIFASSTQRFPTVTSVSGTNGSPSVAGRLASNFMGASL-RSRLPKMGKVVKVTG 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV AA AV  +P E  KE+KLPSWA+FELGRAPVYWKT+NGLPP+SGEKLKLFYNP A+ 
Sbjct: 61  KVSAA-AVATTPVEETKEVKLPSWAMFELGRAPVYWKTMNGLPPSSGEKLKLFYNPVASK 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           LVPN+DFGI FNGGFNQPIMCGGEPRAML+K RGKAD PIYTIQIC+PKHA+NLIFSFTN
Sbjct: 121 LVPNEDFGIGFNGGFNQPIMCGGEPRAMLKKARGKADRPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           G +WDGPY+LQFQVPK W+NKPI+FFNQGLAEELSKEGACD+AIFPDTNIVI RCA+IGN
Sbjct: 181 GTEWDGPYKLQFQVPKAWRNKPIEFFNQGLAEELSKEGACDKAIFPDTNIVIDRCALIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           L +EGGDRC LD V+GCTDPSS L+NP ANVDDGSCPI++D+ED
Sbjct: 241 LTLEGGDRCNLDFVIGCTDPSSPLYNPLANVDDGSCPIESDSED 282

[Close]
BLAST of CmaCh17G008650 vs. TrEMBL
Match: A0A151SGV1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_000227 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.7e-113
Identity = 202/283 (71.38%), Postives = 227/283 (80.21%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAATN  I+ASS  T P +         P  +    S F   SLPR  L KK     + +
Sbjct: 1   MAATNASIFASS--TQPCLPVP------PSISNTLASPFLNVSLPRCYLDKKRHVKFSQK 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
              AAVA   +  E ++E KLPSWA+FE+GRAPVYWKT+NGLPPTSGEKLKLFYNP A  
Sbjct: 61  ISAAAVATTTTTNEEIQEYKLPSWAVFEIGRAPVYWKTMNGLPPTSGEKLKLFYNPDAAQ 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           L P+++FGIAFNGGFNQPIMCGGEPRAMLRKDRGKAD PIYTIQIC+PKHA+NLIFSFTN
Sbjct: 121 LAPSEEFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADAPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           GVDWDGPYRLQFQVPKP+QNK IDFFN+GLAEELSKEGAC++AIFPDT  VITRCAMIGN
Sbjct: 181 GVDWDGPYRLQFQVPKPFQNKAIDFFNKGLAEELSKEGACEKAIFPDTTKVITRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTE 284
           L+ EGGDRCEL+LV GCTDPSSHL+NP ANVDDG+CPID D+E
Sbjct: 241 LSKEGGDRCELNLVPGCTDPSSHLYNPLANVDDGTCPIDLDSE 275

[Close]
BLAST of CmaCh17G008650 vs. TrEMBL
Match: A0A061G8S6_THECC (Post-illumination chlorophyll fluorescence increase isoform 1 OS=Theobroma cacao GN=TCM_027194 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.8e-113
Identity = 200/285 (70.18%), Postives = 232/285 (81.40%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTR-NQGSNFFGSSLPRGILKKKDVGIRTV 60
           MAAT + I+ S  Q   A R+ R   + P  ++ N  S+F G+SLPR   K K + ++  
Sbjct: 1   MAATAS-IFTSPTQPFSATRSVRGTSAKPSISKPNAASSFMGASLPRDFAKTKRL-VKIS 60

Query: 61  RKVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAAT 120
            KV AA  V  +P E +KE  LPSWA+FELGRAPVYWKT+NGLPPTSG+K+KLFYNPAAT
Sbjct: 61  VKVTAAATVTKNPMEQIKEYALPSWAMFELGRAPVYWKTMNGLPPTSGKKVKLFYNPAAT 120

Query: 121 NLVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFT 180
            LVPN+++GIAFNGGFNQPIMCGGEPRAMLRK RGKAD PIYTIQICVPKHA+NLIFSFT
Sbjct: 121 KLVPNEEYGIAFNGGFNQPIMCGGEPRAMLRKSRGKADSPIYTIQICVPKHAVNLIFSFT 180

Query: 181 NGVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIG 240
           NG +WDGPYRLQFQVPK WQN+ I+FFNQGLAEELS+EGACDRAIFPDTNIV+  C MIG
Sbjct: 181 NGANWDGPYRLQFQVPKAWQNRAIEFFNQGLAEELSQEGACDRAIFPDTNIVVDGCVMIG 240

Query: 241 NLNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           NL+ EGGDRC LDLV GC DP+S+L+NP ANVDDGSC ID+D+ED
Sbjct: 241 NLSKEGGDRCSLDLVPGCMDPNSYLYNPLANVDDGSCLIDSDSED 283

[Close]
BLAST of CmaCh17G008650 vs. TAIR10
Match: AT3G15840.1 (AT3G15840.1 post-illumination chlorophyll fluorescence increase)

HSP 1 Score: 388.3 bits (996), Expect = 4.2e-108
Identity = 177/248 (71.37%), Postives = 204/248 (82.26%), Query Frame = 1 

Query: 37  SNFFGSSLPRGILKKKDVGIRTVRKVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYW 96
           S+  G  L R   KK D+ ++       AVA   +P E +KE KLPSWA+FE+G APVYW
Sbjct: 27  SSRIGPILRRFPRKKLDLQVK-------AVATTLAPLEEIKEYKLPSWAMFEMGTAPVYW 86

Query: 97  KTVNGLPPTSGEKLKLFYNPAATNLVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKA 156
           KT+NGLPPTSGEKLKLFYNPAA+ L  N+D+G+AFNGGFNQPIMCGGEPRAML+KDRGKA
Sbjct: 87  KTMNGLPPTSGEKLKLFYNPAASKLTLNEDYGVAFNGGFNQPIMCGGEPRAMLKKDRGKA 146

Query: 157 DGPIYTIQICVPKHAINLIFSFTNGVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSK 216
           D PIYT+QIC+PKHA+NLIFSFTNGVDWDGPYRLQFQVPK WQNKPI+FFN+GLA ELS+
Sbjct: 147 DSPIYTMQICIPKHAVNLIFSFTNGVDWDGPYRLQFQVPKRWQNKPIEFFNEGLANELSQ 206

Query: 217 EGACDRAIFPDTNIVITRCAMIGNLNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSC 276
           +GAC+RAIFPD+N+V TRC MI NL VEGGDRC LDLV GC D +S  FNPYANVDDGSC
Sbjct: 207 DGACERAIFPDSNVVPTRCTMIANLTVEGGDRCNLDLVPGCMDTNSEHFNPYANVDDGSC 266

Query: 277 PIDTDTED 285
           P++    D
Sbjct: 267 PLELSDSD 267

[Close]
BLAST of CmaCh17G008650 vs. NCBI nr
Match: gi|659122407|ref|XP_008461127.1| (PREDICTED: uncharacterized protein LOC103499808 [Cucumis melo])

HSP 1 Score: 520.0 bits (1338), Expect = 2.6e-144
Identity = 248/284 (87.32%), Postives = 261/284 (91.90%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAATN PI+ASS QTS  IRTQRRGESCPQSTR  GSNF GSS P+ +    +V  RTVR
Sbjct: 1   MAATNAPIFASSFQTSLPIRTQRRGESCPQSTRTLGSNFSGSSSPKCL--PNNVRFRTVR 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV AAVAVEASPTE M EIKLPSWALFELG+APVYWKTVNGLPPT+GEKLKLFYNPAATN
Sbjct: 61  KVNAAVAVEASPTEEMTEIKLPSWALFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           L PN+DFGIAFNGGFNQPIMCGGEPRAML+KDRGKADGPIYTIQIC+PKHA+NLIFSFTN
Sbjct: 121 LAPNEDFGIAFNGGFNQPIMCGGEPRAMLKKDRGKADGPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           G DWDGPYRLQFQVPK WQNKPIDFFNQGLAEELSKEGACDRAIFPDT+IVITRCAMIGN
Sbjct: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSIVITRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           L VEGGDRC+L+LVLGCTDPSSHLFNP ANVDDGSCPIDTDTED
Sbjct: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 282

[Close]
BLAST of CmaCh17G008650 vs. NCBI nr
Match: gi|449436138|ref|XP_004135851.1| (PREDICTED: uncharacterized protein LOC101207565 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 6.4e-143
Identity = 244/284 (85.92%), Postives = 255/284 (89.79%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAATN PI+ASS  TS  I TQRRGESCPQSTR  GS   GSS  + +   KDV  RTVR
Sbjct: 1   MAATNAPIFASSFPTSLPITTQRRGESCPQSTRTLGSGISGSSFSKCLPNNKDVRFRTVR 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV AAVAVEASP E M EIKLPSW LFELG+APVYWKTVNGLPPT+GEKLKLFYNPAATN
Sbjct: 61  KVNAAVAVEASPAEEMTEIKLPSWTLFELGKAPVYWKTVNGLPPTAGEKLKLFYNPAATN 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           L PNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQIC+PKHAINLIFSFTN
Sbjct: 121 LAPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICIPKHAINLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           G DWDGPYRLQFQVPK WQNKPIDFFNQGLAEELSKEGACDRAIFPDT++V+TRCAMIGN
Sbjct: 181 GTDWDGPYRLQFQVPKAWQNKPIDFFNQGLAEELSKEGACDRAIFPDTSVVVTRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           L VEGGDRC+L+LVLGCTDPSSHLFNP ANVDDGSCPIDTDTED
Sbjct: 241 LTVEGGDRCDLNLVLGCTDPSSHLFNPLANVDDGSCPIDTDTED 284

[Close]
BLAST of CmaCh17G008650 vs. NCBI nr
Match: gi|1009112914|ref|XP_015870740.1| (PREDICTED: uncharacterized protein LOC107407915 [Ziziphus jujuba])

HSP 1 Score: 447.6 bits (1150), Expect = 1.6e-122
Identity = 209/284 (73.59%), Postives = 243/284 (85.56%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAA+N  I+ASS Q   A R+  R +  P  + + GSNF GSSLP  + +KK V ++   
Sbjct: 1   MAASNGSIFASSAQPFSATRSLTRNKIAPPVSSSLGSNFKGSSLPSSLKQKKKV-VKISG 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV AA AVE SP E +KE  LP+WA+FELGR+PVYWKT+NGLPPTSGEK+++FYNPAA N
Sbjct: 61  KVSAAAAVETSPAEEIKEFTLPTWAMFELGRSPVYWKTMNGLPPTSGEKVRIFYNPAANN 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           LVPND+FGIAFNGGFNQPIMCGGEPRAML+K RGKAD PIY+IQICVPKHA+NLIFSFTN
Sbjct: 121 LVPNDEFGIAFNGGFNQPIMCGGEPRAMLKKVRGKADSPIYSIQICVPKHALNLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           GVDWDGPYRLQFQVP+ WQNKPI+FFN+GL EELSK+GAC+RAIFPDTNIV+TRCAMIGN
Sbjct: 181 GVDWDGPYRLQFQVPRAWQNKPIEFFNEGLTEELSKDGACERAIFPDTNIVVTRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           L++EGGDRC LDLV+GCTDPSS L+NP ANVDDG+C IDTD+ED
Sbjct: 241 LSLEGGDRCNLDLVVGCTDPSSPLYNPLANVDDGTCLIDTDSED 283

[Close]
BLAST of CmaCh17G008650 vs. NCBI nr
Match: gi|703101571|ref|XP_010097223.1| (hypothetical protein L484_025772 [Morus notabilis])

HSP 1 Score: 431.0 bits (1107), Expect = 1.6e-117
Identity = 204/283 (72.08%), Postives = 232/283 (81.98%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAATN  I+ SS QT  A+R+    ++         SNF GSSL R   +KK V ++   
Sbjct: 1   MAATNGSIFPSSAQTFLALRSISSNKATHLVPTPLASNFLGSSLSRSPSEKKKV-VKISG 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV  A+AV  SP E +KE  LPSWA+FELG+APVYWKT+NGLPPTSGE+LK+FYNPAATN
Sbjct: 61  KVCVAMAVATSPGEEIKEFTLPSWAMFELGKAPVYWKTMNGLPPTSGERLKIFYNPAATN 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
             PND+FGIAFNGGFNQPIMCGGEPRAM +K RGKAD PIY+IQIC+PKHA+ LIFSFTN
Sbjct: 121 FAPNDEFGIAFNGGFNQPIMCGGEPRAMRKKSRGKADSPIYSIQICIPKHALKLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           GVDWDGPYR+QFQVPK WQNKPI+FFN+GLAEELSKEGACDRAIFPD +IV+TRCAMIGN
Sbjct: 181 GVDWDGPYRMQFQVPKSWQNKPIEFFNEGLAEELSKEGACDRAIFPDASIVVTRCAMIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTE 284
           L+VEGGDRC L+LV GCTDPSS  +NP ANVDDGSCPIDTD E
Sbjct: 241 LSVEGGDRCNLNLVPGCTDPSSPFYNPLANVDDGSCPIDTDDE 282

[Close]
BLAST of CmaCh17G008650 vs. NCBI nr
Match: gi|225442943|ref|XP_002266165.1| (PREDICTED: uncharacterized protein PIFI [Vitis vinifera])

HSP 1 Score: 427.2 bits (1097), Expect = 2.3e-116
Identity = 202/284 (71.13%), Postives = 230/284 (80.99%), Query Frame = 1 

Query: 1   MAATNTPIYASSLQTSPAIRTQRRGESCPQSTRNQGSNFFGSSLPRGILKKKDVGIRTVR 60
           MAAT   I+ASS Q  P + +       P       SNF G+SL R  L K    ++   
Sbjct: 1   MAATTGSIFASSTQRFPTVTSVSGTNGSPSVAGRLASNFMGASL-RSRLPKMGKVVKVTG 60

Query: 61  KVIAAVAVEASPTEGMKEIKLPSWALFELGRAPVYWKTVNGLPPTSGEKLKLFYNPAATN 120
           KV AA AV  +P E  KE+KLPSWA+FELGRAPVYWKT+NGLPP+SGEKLKLFYNP A+ 
Sbjct: 61  KVSAA-AVATTPVEETKEVKLPSWAMFELGRAPVYWKTMNGLPPSSGEKLKLFYNPVASK 120

Query: 121 LVPNDDFGIAFNGGFNQPIMCGGEPRAMLRKDRGKADGPIYTIQICVPKHAINLIFSFTN 180
           LVPN+DFGI FNGGFNQPIMCGGEPRAML+K RGKAD PIYTIQIC+PKHA+NLIFSFTN
Sbjct: 121 LVPNEDFGIGFNGGFNQPIMCGGEPRAMLKKARGKADRPIYTIQICIPKHAVNLIFSFTN 180

Query: 181 GVDWDGPYRLQFQVPKPWQNKPIDFFNQGLAEELSKEGACDRAIFPDTNIVITRCAMIGN 240
           G +WDGPY+LQFQVPK W+NKPI+FFNQGLAEELSKEGACD+AIFPDTNIVI RCA+IGN
Sbjct: 181 GTEWDGPYKLQFQVPKAWRNKPIEFFNQGLAEELSKEGACDKAIFPDTNIVIDRCALIGN 240

Query: 241 LNVEGGDRCELDLVLGCTDPSSHLFNPYANVDDGSCPIDTDTED 285
           L +EGGDRC LD V+GCTDPSS L+NP ANVDDGSCPI++D+ED
Sbjct: 241 LTLEGGDRCNLDFVIGCTDPSSPLYNPLANVDDGSCPIESDSED 282

The following BLAST results are available for this feature:
BLAST of CmaCh17G008650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh17G008650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6Y0_CUCSA4.5e-14385.92Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432450 PE=4 SV=1[more]
W9RC44_9ROSA1.1e-11772.08Uncharacterized protein OS=Morus notabilis GN=L484_025772 PE=4 SV=1[more]
D7U138_VITVI1.6e-11671.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06980 PE=4 SV=... [more]
A0A151SGV1_CAJCA3.7e-11371.38Uncharacterized protein OS=Cajanus cajan GN=KK1_000227 PE=4 SV=1[more]
A0A061G8S6_THECC4.8e-11370.18Post-illumination chlorophyll fluorescence increase isoform 1 OS=Theobroma cacao... [more]
BLAST of CmaCh17G008650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15840.14.2e-10871.37 post-illumination chlorophyll fluorescence increase[more]
BLAST of CmaCh17G008650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122407|ref|XP_008461127.1|2.6e-14487.32PREDICTED: uncharacterized protein LOC103499808 [Cucumis melo][more]
gi|449436138|ref|XP_004135851.1|6.4e-14385.92PREDICTED: uncharacterized protein LOC101207565 [Cucumis sativus][more]
gi|1009112914|ref|XP_015870740.1|1.6e-12273.59PREDICTED: uncharacterized protein LOC107407915 [Ziziphus jujuba][more]
gi|703101571|ref|XP_010097223.1|1.6e-11772.08hypothetical protein L484_025772 [Morus notabilis][more]
gi|225442943|ref|XP_002266165.1|2.3e-11671.13PREDICTED: uncharacterized protein PIFI [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010478 chlororespiration
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009579 thylakoid
cellular_component GO:0044424 intracellular part
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh17G008650.1CmaCh17G008650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32429FAMILY NOT NAMEDcoord: 56..280
score: 1.3E
NoneNo IPR availablePANTHERPTHR32429:SF9POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE PROTEINcoord: 56..280
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh17G008650Cucsa.105500Cucumber (Gy14) v1cgycmaB0237
CmaCh17G008650Cla015356Watermelon (97103) v1cmawmB328
CmaCh17G008650Csa7G432450Cucumber (Chinese Long) v2cmacuB388
CmaCh17G008650MELO3C023426Melon (DHL92) v3.5.1cmameB326
CmaCh17G008650ClCG09G002940Watermelon (Charleston Gray)cmawcgB306
CmaCh17G008650CSPI07G20490Wild cucumber (PI 183967)cmacpiB392
CmaCh17G008650CmoCh17G008340Cucurbita moschata (Rifu)cmacmoB353
CmaCh17G008650Lsi02G027050Bottle gourd (USVL1VR-Ls)cmalsiB348
CmaCh17G008650Cp4.1LG12g07620Cucurbita pepo (Zucchini)cmacpeB371
CmaCh17G008650MELO3C023426.2Melon (DHL92) v3.6.1cmamedB379
CmaCh17G008650CsaV3_7G032330Cucumber (Chinese Long) v3cmacucB0462
CmaCh17G008650Cla97C09G165160Watermelon (97103) v2cmawmbB387
CmaCh17G008650Bhi09G000012Wax gourdcmawgoB0492
CmaCh17G008650CsGy7G018780Cucumber (Gy14) v2cgybcmaB925
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh17G008650Cucurbita maxima (Rimu)cmacmaB175
CmaCh17G008650Cucurbita maxima (Rimu)cmacmaB360
CmaCh17G008650Cucurbita maxima (Rimu)cmacmaB368
CmaCh17G008650Cucurbita maxima (Rimu)cmacmaB382
CmaCh17G008650Cucurbita moschata (Rifu)cmacmoB361
CmaCh17G008650Cucurbita moschata (Rifu)cmacmoB374
CmaCh17G008650Melon (DHL92) v3.5.1cmameB348
CmaCh17G008650Watermelon (Charleston Gray)cmawcgB332
CmaCh17G008650Watermelon (97103) v1cmawmB339
CmaCh17G008650Cucurbita pepo (Zucchini)cmacpeB399
CmaCh17G008650Cucurbita pepo (Zucchini)cmacpeB369
CmaCh17G008650Cucurbita pepo (Zucchini)cmacpeB376
CmaCh17G008650Bottle gourd (USVL1VR-Ls)cmalsiB343
CmaCh17G008650Cucumber (Gy14) v2cgybcmaB196
CmaCh17G008650Cucumber (Gy14) v2cgybcmaB502
CmaCh17G008650Melon (DHL92) v3.6.1cmamedB402
CmaCh17G008650Silver-seed gourdcarcmaB0192
CmaCh17G008650Silver-seed gourdcarcmaB0277
CmaCh17G008650Silver-seed gourdcarcmaB0799
CmaCh17G008650Silver-seed gourdcarcmaB1419
CmaCh17G008650Cucumber (Chinese Long) v3cmacucB0423
CmaCh17G008650Cucumber (Chinese Long) v3cmacucB0436
CmaCh17G008650Watermelon (97103) v2cmawmbB362
CmaCh17G008650Watermelon (97103) v2cmawmbB382