Cucsa.104480 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGAGTTAGGGGGAGGAAGCCATAGTCCGTGTCGGCATCGAACTCCGATTAGTCAAGGTCAGGGAAGCGTTGCATTTGCCGGAGGAACATCAAAATTTCGTATTGCATACATTCATATCCTCAAATGTCAAAATCTATGCGGATTTTGATACTTTTAGGAGGTAAACGACCTTGGGGAGCAAGGCAACTCCGGAGGGTAAATACCCCAAGCTGACTTTCAATCAATTTCATTACCGATTGACATGGGTTTTTGGCTCAACCCACGATTCTTCATAACCTCCTAATAAAGCCCCTTCACTCAACAAaCAATGCTCACTTTTCGCTCTATTTTCTCAACCTCCAAACATCACTCCCGTCAGGCTCCATCTGTATTTCAAAGGTTTTTCCCTTAAACCCCCTTTTGTACCCATTCCCGCTGGTTATGTTGCGTTTTATTACTGTTTATATGCCTTTCTATTATCTTTCTCTCAATCCAAATCCCGCATGTGCAAATAATTATCCCGCTGAGTTGGTTTCTGCTTTCTATCAATGCAATTCCATGTTTTGGTTTATCAATAACTTACTTTAAATTGTTAACTGGAGGCATACGGCTGTGACTATATTTGTATTGGGATCGTTCTTTCCAGTGAACCTGGTTAATTTTGAATTTTGGCGTAGGTTACATCCATCAATTAGCGTTCTGTCCTGCAAATGTTCCACATCATCAAAATACAGCAAGGAAAGACCTGAAGTTCCTCTTCTATCCGCAGATGGACATACTTCTTCTTCATGGACTACTTATATCATTGTATGACCTGATCTCATCTTTTAGTTTCAAGTTTCTCCTTGTTGGGTAAATATAGTTTTGTGAAGACGTTTTAAATTGGCCTTCTTTTGTGTTTCGTTACATTACTATTCTATACTAATCATCATAATGCCTTTTTGAATTTCTTTGCTTTACTTTTATTATTTTTGTTTTTGTGCAGCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTACATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGTTACTATCTTTGTGCTCTTCTGTCGATTTTTTGCTGCCATTACAATTAGTTTCAGTAATTTATTGTCTGCATTAAGATACGAGAAAGATTATATGGCACTAGCAGTCGTGTTAGGACTTGGGACGACCTCAAGAAACCATAGATAGTTGTGGAACCATCCAGTAGTTGTGAATTTCCTAGACTTCTATATGCTCAGGTAGAGAGATGAGAAAGTAGAAGATGGAAAAAGCTTGAATGGGCTGAACAATAACCTCTTTATATGTGGATTATGAAAATGTCAGATTTGTGTCTATGAACAGGCATTATATATACATATCCTACTTGCGTAATCTGATTATATCTAAACTGTACGATGAAGTTATGGGCTGTTACAACTCACGATGTGGATGGCAGGGGTTAACTTATTGAAATTAATGTTGTAATATACTGTACGATCAAGTTTATGCTCTGAAGATTTGACATCCGCCTGACTTTTAGTTATCCCGTGGCAGCATGTAGTATACTTTTTAGATTGATTTTAGGGGCCATGTTTTAGTGCTTCAGATTTAAAGACAACTAAAGTGTCTTCTTTGATTCAGGACAGGGAAACACGTGCGAAAACATAGTTAAAGGACCAGTTATTGGGGGCCCATTTTCTCTTATCGATACAGAGAAAAGAAATGTAACAGAGAAAGATCTTCGGGGGAACTGGACTCTGCTCTACTTTGGATACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGGTATTCGACTACTTTAAAACATGCAACTTTGGATTATTGTTGCCGTGTACTTCCACTCTTGTTTTAATTACTTGTTTGTTGTTCTGTGAATAAGAATCTAGACATAAATTCAAGGTTCTACCTATATTCGTGACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTATCTTAAAGGTCAGTCTTTACCTCTTCATGAAGATTGTCAAGATAAATATATTTTGGCGGAGGTTTATCTTATCTTTCCTATCATTTATGGACTGCAGAGTTCGATTCAAGAATTATAGGACTAACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGAGTTTACTTTAAGAAGGTTGAGGAGGAAGGCAATGATTATCTTATCGATACTTCACACAAAATGTAAGCCACCTGACACAATCGAATCTACTTCTCATATTATGACTTGAACAATGTATTATGTATGTATGACGGGGAAAAaCGATCAGGTATTTGTTGAGTCCAAACCTGGAGGTTTTGAGATGCTTTGGAATGGAGTACAATGCTGAAGAGGTTTCACAAGCCATACTGAACGTACTTCAGAAAACTCCTCAATAACGCCCTACAGGTCTTCAACTTCTCTCCTATGCATTCCTATTTGTTCTAAATTTCTTTTtAGTCATCCAGTAAAGCACTTGAGACGTCGGCT GTTGGAGTTAGGGGGAGGAAGCCATAGTCCGTGTCGGCATCGAACTCCGATTAGTCAAGGTCAGGGAAGCGTTGCATTTGCCGGAGGAACATCAAAATTTCGTATTGCATACATTCATATCCTCAAATGTCAAAATCTATGCGGATTTTGATACTTTTAGGAGGTAAACGACCTTGGGGAGCAAGGCAACTCCGGAGGGTAAATACCCCAAGCTGACTTTCAATCAATTTCATTACCGATTGACATGGGTTTTTGGCTCAACCCACGATTCTTCATAACCTCCTAATAAAGCCCCTTCACTCAACAAACAATGCTCACTTTTCGCTCTATTTTCTCAACCTCCAAACATCACTCCCGTCAGGCTCCATCTGTATTTCAAAGGTTACATCCATCAATTAGCGTTCTGTCCTGCAAATGTTCCACATCATCAAAATACAGCAAGGAAAGACCTGAAGTTCCTCTTCTATCCGCAGATGGACATACTTCTTCTTCATGGACTACTTATATCATTCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTACATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGACAGGGAAACACGTGCGAAAACATAGTTAAAGGACCAGTTATTGGGGGCCCATTTTCTCTTATCGATACAGAGAAAAGAAATGTAACAGAGAAAGATCTTCGGGGGAACTGGACTCTGCTCTACTTTGGATACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGAATCTAGACATAAATTCAAGGTTCTACCTATATTCGTGACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTATCTTAAAGAGTTCGATTCAAGAATTATAGGACTAACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGAGTTTACTTTAAGAAGGTTGAGGAGGAAGGCAATGATTATCTTATCGATACTTCACACAAAATGTATTTGTTGAGTCCAAACCTGGAGGTTTTGAGATGCTTTGGAATGGAGTACAATGCTGAAGAGGTTTCACAAGCCATACTGAACGTACTTCAGAAAACTCCTCAATAACGCCCTACAGGTCTTCAACTTCTCTCCTATGCATTCCTATTTGTTCTAAATTTCTTTTTAGTCATCCAGTAAAGCACTTGAGACGTCGGCT ATGCTCACTTTTCGCTCTATTTTCTCAACCTCCAAACATCACTCCCGTCAGGCTCCATCTGTATTTCAAAGGTTACATCCATCAATTAGCGTTCTGTCCTGCAAATGTTCCACATCATCAAAATACAGCAAGGAAAGACCTGAAGTTCCTCTTCTATCCGCAGATGGACATACTTCTTCTTCATGGACTACTTATATCATTCCAGCTGCGGTGATGGGTTTTGTTGGGTTAGCAGCCTTTGTACATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGACAGGGAAACACGTGCGAAAACATAGTTAAAGGACCAGTTATTGGGGGCCCATTTTCTCTTATCGATACAGAGAAAAGAAATGTAACAGAGAAAGATCTTCGGGGGAACTGGACTCTGCTCTACTTTGGATACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAGACATATTAGAATCTAGACATAAATTCAAGGTTCTACCTATATTCGTGACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTATCTTAAAGAGTTCGATTCAAGAATTATAGGACTAACTGGGCCAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGAGTTTACTTTAAGAAGGTTGAGGAGGAAGGCAATGATTATCTTATCGATACTTCACACAAAATGTATTTGTTGAGTCCAAACCTGGAGGTTTTGAGATGCTTTGGAATGGAGTACAATGCTGAAGAGGTTTCACAAGCCATACTGAACGTACTTCAGAAAACTCCTCAATAA MLTFRSIFSTSKHHSRQAPSVFQRLHPSISVLSCKCSTSSKYSKERPEVPLLSADGHTSSSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTCENIVKGPVIGGPFSLIDTEKRNVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESRHKFKVLPIFVTIDPQRDNPSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPNLEVLRCFGMEYNAEEVSQAILNVLQKTPQ*
BLAST of Cucsa.104480 vs. Swiss-Prot
Match: SCO12_ARATH (Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana GN=HCC2 PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.1e-78 Identity = 150/279 (53.76%), Postives = 193/279 (69.18%), Query Frame = 1
BLAST of Cucsa.104480 vs. Swiss-Prot
Match: SCO11_ARATH (Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana GN=HCC1 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.7e-36 Identity = 71/210 (33.81%), Postives = 127/210 (60.48%), Query Frame = 1
BLAST of Cucsa.104480 vs. Swiss-Prot
Match: SCO1_SCHPO (Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sco1 PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 3.0e-33 Identity = 80/239 (33.47%), Postives = 131/239 (54.81%), Query Frame = 1
BLAST of Cucsa.104480 vs. Swiss-Prot
Match: SCO1_HUMAN (Protein SCO1 homolog, mitochondrial OS=Homo sapiens GN=SCO1 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.5e-29 Identity = 73/201 (36.32%), Postives = 114/201 (56.72%), Query Frame = 1
BLAST of Cucsa.104480 vs. Swiss-Prot
Match: SCO1_BOVIN (Protein SCO1 homolog, mitochondrial OS=Bos taurus GN=SCO1 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28 Identity = 69/201 (34.33%), Postives = 115/201 (57.21%), Query Frame = 1
BLAST of Cucsa.104480 vs. TrEMBL
Match: A0A0A0KIW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500510 PE=4 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 1.6e-150 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Cucsa.104480 vs. TrEMBL
Match: A0A0B2RAA9_GLYSO (Protein SCO1 like 2, mitochondrial OS=Glycine soja GN=glysoja_008409 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 3.3e-87 Identity = 162/267 (60.67%), Postives = 203/267 (76.03%), Query Frame = 1
BLAST of Cucsa.104480 vs. TrEMBL
Match: I1KT38_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G137200 PE=4 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 3.3e-87 Identity = 162/267 (60.67%), Postives = 203/267 (76.03%), Query Frame = 1
BLAST of Cucsa.104480 vs. TrEMBL
Match: A0A067ERV2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042757mg PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85 Identity = 162/264 (61.36%), Postives = 204/264 (77.27%), Query Frame = 1
BLAST of Cucsa.104480 vs. TrEMBL
Match: V4SW60_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026221mg PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 6.8e-85 Identity = 160/264 (60.61%), Postives = 203/264 (76.89%), Query Frame = 1
BLAST of Cucsa.104480 vs. TAIR10
Match: AT4G39740.1 (AT4G39740.1 Thioredoxin superfamily protein) HSP 1 Score: 294.7 bits (753), Expect = 5.9e-80 Identity = 150/279 (53.76%), Postives = 193/279 (69.18%), Query Frame = 1
BLAST of Cucsa.104480 vs. TAIR10
Match: AT3G08950.1 (AT3G08950.1 electron transport SCO1/SenC family protein) HSP 1 Score: 154.5 bits (389), Expect = 9.6e-38 Identity = 71/210 (33.81%), Postives = 127/210 (60.48%), Query Frame = 1
BLAST of Cucsa.104480 vs. NCBI nr
Match: gi|449451445|ref|XP_004143472.1| (PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis sativus]) HSP 1 Score: 540.0 bits (1390), Expect = 2.3e-150 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1
BLAST of Cucsa.104480 vs. NCBI nr
Match: gi|659080093|ref|XP_008440607.1| (PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis melo]) HSP 1 Score: 514.2 bits (1323), Expect = 1.3e-142 Identity = 259/269 (96.28%), Postives = 261/269 (97.03%), Query Frame = 1
BLAST of Cucsa.104480 vs. NCBI nr
Match: gi|694423887|ref|XP_009339733.1| (PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 330.5 bits (846), Expect = 2.8e-87 Identity = 159/266 (59.77%), Postives = 211/266 (79.32%), Query Frame = 1
BLAST of Cucsa.104480 vs. NCBI nr
Match: gi|356525489|ref|XP_003531357.1| (PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Glycine max]) HSP 1 Score: 329.7 bits (844), Expect = 4.7e-87 Identity = 162/267 (60.67%), Postives = 203/267 (76.03%), Query Frame = 1
BLAST of Cucsa.104480 vs. NCBI nr
Match: gi|694408153|ref|XP_009378785.1| (PREDICTED: protein SCO1 homolog 2, mitochondrial-like [Pyrus x bretschneideri]) HSP 1 Score: 329.7 bits (844), Expect = 4.7e-87 Identity = 158/266 (59.40%), Postives = 210/266 (78.95%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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