Carg00688 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00688
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein SCO1 homolog 2, mitochondrial
Location	Cucurbita_argyrosperma_scaffold_014 : 993890 .. 996840 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACCGCAATCCGGCGTCGCTGTTTAATCAAGGGAAGCGAAGGAATCTGGGGGCAGCAAGATTGTGTTGCACTTACAGGCTGAAAATTGATATCCTGGAAAGTCAAAATCTATGCCGATTGGGATAGTTTTAGAAGGTAGACAATCTTGGAGAGCAAGGCGCGTAACAATTGAAATGGGTCTTTGGTCGAAGCCACGATTGTTCAGAAGCTCATAAAGTTCTCTCCCCACGGAACAAATATGCTCACTTCTCGTTCTATTTTCTCTCCCTCCAAACTCCACTCCCCTCATGCTCGCTGTCTACTTCGAAGGTTTTTCCCTTAAACCCTTTACAACTGATTCCTATCCTTCGATTGTTGGTATTGTGTTGTGTTTTTATGGCTGCTGATTATCTATCTTTGAATCCGAACGCCGCATGTGCAAACCATTATCCTGCTGAGTTGGTCTGTCATTTGTATCAATGCAATTCGATGTATTCGTTTACCAAGTGGAAGCGTAGGGTTTTCGCCAAATTTTCCCGAGTTTTGCTTACTAACTTCACACGAGATGTGATTATATTGAATTGCGATCGTCTGGAGTTACGTAATCGTGGGTCCTGTTTCTTCTAATGTAAAACCATGACATGTAGCTGATAATCAAGTGACTTCCAGTACAGTTATGGGCTAGATTGTCATTGTCTACTGAGAGAAATTTTGATGTAGGTTACATCCATCAATTAGCGTTCGGTCCTGCAGATATTCCACAGCATCAAAATACAATAAGGAAAGACCAGAAGTCCATCCTGTCATTTCTGTAGATGCACATACTTCTCGTTCATGGGCTACTTATATCATTGTATGACCTGACCCTCCCTCATCTTTTAGATTCAAAATTCTCCTTTTCAATTTCTTTACTTTACTGTTATTGTTAGTATTTTTGTGCAGCCAGCTGCGGTCATGGGGTTTGTTGGGTTAGCTGCCTTTGTTCATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGTTTTTGTTTGTGCTCTTTTATTTGATATTGGTCACCATTGTTAATTAGTTTCGCTGCAAATAAGTTTCATAATTATTGTCTATATTAAGACTTAAGAAAGAAAATATAGCACAGACGGTTCTGTTAGGACTTGGGATGACCATTATACAAGGTTCTATATAACCTATGATTTGTTTGCTTTTAGTTTTACTCTATTGGGGGTCTCTTACCACAAGAAACCATAGGTAGCTGTGCAATCAATCATCCAGTAGTTGTGGATTTCCTTGACTCCTCTATGCATAGGATAGGGAAATGAGGAAGTAGAAGATTGAAATAAAGCTTGAATGGCCTGAATAATAACCTCTTTTTATAGGGATTATGGAAACGTTTAGATTTGTGCTTATAAGCAAGCACTATATGTTAGGAATTACGGATATCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGACTTTGCTTTTGGTTTCCTCTAAAGGCCTCGTACCAATGGAGATTTATTCCCTACTTATAAACCCATGATCATTTCCTTAATTAGCCAACGTGGGACTCCCTCCCAACAATCCTCAACACTATATGCATATCCTATTTGCCATGTCTCTAAACTATACTGGGAATTTATGGGCTTTTACAACTCCTGATATGAACGGCTGTTCTGTTTAGTTTTTCAACCCTGCTGAGACAGTGATGCGTGGCAGTGGTAAACTTGTTGATATTAGCGTTGTAATACTGCATGATCAAGTTTATGCTCTGAAGATTTTGGCACACGAATGACTTTTAATGAGCCTGAGGCAGCATGTGGAATAAGTTTCGGATTGATTTTGGGGACAATATTTAAATGCTTCAGATTTAAAGACAACTAAAGTGTCTTCTTCTACTCAGGGCAGGGAAGCACCTCTGTAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTATTGATACAGAGAAAAGAATTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGTTACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAAACATATTAGGTATTTCACTACTTTAAAAAACTGCAACATTTGCATTATCCGTTTATATGGTGTTGGCATTTACTGCCTCTCTTGCTTTATTTATTTGTTTATGGTTCTGTGAATAAGAGTCTAGACATAACGTCAAGGTTCGACCTGTATTTGTCACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTACCTTAAAGGTCAGTCTTTTCCTCTTCCTGAAGATGATACATATTTTCCAGATAAATATATTTGGGTGGACGTTTCCCTTATTTTTGCCATCATCTTTGGACTGCAGAGTTTGATCCAAGAATTATAGGACTGACTGGGCAAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGTGTTTACTTTAAGAAGATTGAAGAGGATGGCAACGATTATCTTATCGATTCTTCACACAAAATGTAAGCCACCTGACACTACTGACTGTGTTTTTTCTCATTAGGACTTGAATAATAATGTATGTATAATGCGGAAAAACAATCAGGTATTTGTTGAGTCCAAACCTGGAGGTTATGAGATGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCACAAGCCATACTGAATGCACTACAGAAAACTGCTCACTAATTACCGACAGGTCTTCAAGTTCTTTCCTTTGCATTCCTATTTGTTGTAAGTTTCTTTCTAGTCATTCAGTGAAAGCCTTGGAGGTGTTAGATTGAGTTTATTACCTGAATTTCAACCCTTCAGATGTCCATTAGTAGTAGAATAGTGTAAACAGAAAAGGGCAATTTTTTTGTTCAACTTTGTGAGTTGGGTTGGGATAAATACTAATACAGCATCACTATAATCCAACCTATTCGATTATGG

mRNA sequence

GGAACCGCAATCCGGCGTCGCTGTTTAATCAAGGGAAGCGAAGGAATCTGGGGGCAGCAAGATTGTGTTGCACTTACAGGCTGAAAATTGATATCCTGGAAAGTCAAAATCTATGCCGATTGGGATAGTTTTAGAAGGTAGACAATCTTGGAGAGCAAGGCGCGTAACAATTGAAATGGGTCTTTGGTCGAAGCCACGATTGTTCAGAAGCTCATAAAGTTCTCTCCCCACGGAACAAATATGCTCACTTCTCGTTCTATTTTCTCTCCCTCCAAACTCCACTCCCCTCATGCTCGCTGTCTACTTCGAAGGTTACATCCATCAATTAGCGTTCGGTCCTGCAGATATTCCACAGCATCAAAATACAATAAGGAAAGACCAGAAGTCCATCCTGTCATTTCTGTAGATGCACATACTTCTCGTTCATGGGCTACTTATATCATTCCAGCTGCGGTCATGGGGTTTGTTGGGTTAGCTGCCTTTGTTCATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGGCAGGGAAGCACCTCTGTAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTATTGATACAGAGAAAAGAATTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGTTACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAAACATATTAGAGTCTAGACATAACGTCAAGGTTCGACCTGTATTTGTCACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTACCTTAAAGAGTTTGATCCAAGAATTATAGGACTGACTGGGCAAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGTGTTTACTTTAAGAAGATTGAAGAGGATGGCAACGATTATCTTATCGATTCTTCACACAAAATGTATTTGTTGAGTCCAAACCTGGAGGTTATGAGATGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCACAAGCCATACTGAATGCACTACAGAAAACTGCTCACTAATTACCGACAGGTCTTCAAGTTCTTTCCTTTGCATTCCTATTTGTTGTAAGTTTCTTTCTAGTCATTCAGTGAAAGCCTTGGAGGTGTTAGATTGAGTTTATTACCTGAATTTCAACCCTTCAGATGTCCATTAGTAGTAGAATAGTGTAAACAGAAAAGGGCAATTTTTTTGTTCAACTTTGTGAGTTGGGTTGGGATAAATACTAATACAGCATCACTATAATCCAACCTATTCGATTATGG

Coding sequence (CDS)

ATGCTCACTTCTCGTTCTATTTTCTCTCCCTCCAAACTCCACTCCCCTCATGCTCGCTGTCTACTTCGAAGGTTACATCCATCAATTAGCGTTCGGTCCTGCAGATATTCCACAGCATCAAAATACAATAAGGAAAGACCAGAAGTCCATCCTGTCATTTCTGTAGATGCACATACTTCTCGTTCATGGGCTACTTATATCATTCCAGCTGCGGTCATGGGGTTTGTTGGGTTAGCTGCCTTTGTTCATTATAACGATGAGAGAAGAGCTGTCTTGAAAGGGCAGGGAAGCACCTCTGTAAACGTAGTTAAAGGACCAGTTATTGGGGGCCCTTTTGCTCTTATTGATACAGAGAAAAGAATTGTAACAGAGAAAGATCTTCGGGGGAATTGGACTCTCCTCTACTTTGGTTACACTTCGTCTCCTGATGTTGTGCCAGAGCAACTCCAGATTATGTCCAAGGCTATAAACATATTAGAGTCTAGACATAACGTCAAGGTTCGACCTGTATTTGTCACAATTGATCCACAACGGGATAACCCATCACATCTTCGTGCTTACCTTAAAGAGTTTGATCCAAGAATTATAGGACTGACTGGGCAAGTTGCAGCAGTAAGGCAAATGGCACAGGAATACCGTGTTTACTTTAAGAAGATTGAAGAGGATGGCAACGATTATCTTATCGATTCTTCACACAAAATGTATTTGTTGAGTCCAAACCTGGAGGTTATGAGATGCTTTGGAATCGAGTACAATGCTGAAGAGCTATCACAAGCCATACTGAATGCACTACAGAAAACTGCTCACTAA

Protein sequence

MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTSRSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAILNALQKTAH

Homology

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BLAST of Carg00688 vs. NCBI nr
Match: XP_022949607.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 535.8 bits (1379), Expect = 8.4e-149
Identity = 265/269 (98.51%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS
Sbjct: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
           RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
           IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRH+VKVRPVFVTIDPQRDN
Sbjct: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHSVKVRPVFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHL AYLKEFDPR+IGLTG VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN
Sbjct: 181 PSHLCAYLKEFDPRLIGLTGPVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKTAH 270
           LEVMRCFGIEYNAEELSQAILNALQKTAH
Sbjct: 241 LEVMRCFGIEYNAEELSQAILNALQKTAH 269

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BLAST of Carg00688 vs. NCBI nr
Match: XP_022978543.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 531.9 bits (1369), Expect = 1.2e-147
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLTSRSIFSPSKL SPHARCLL+RLHPSISVRSCRYST SKYNKERPEVHPVISVDAHTS
Sbjct: 1   MLTSRSIFSPSKLPSPHARCLLQRLHPSISVRSCRYSTTSKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
           RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
           IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKA+NILESRH+VKVRPVFVTIDPQRDN
Sbjct: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKALNILESRHSVKVRPVFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHLRAYLKEFDPRIIGLTG VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN
Sbjct: 181 PSHLRAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKTAH 270
           LEVMRCFGIEYNAEELSQAILNALQKTAH
Sbjct: 241 LEVMRCFGIEYNAEELSQAILNALQKTAH 269

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BLAST of Carg00688 vs. NCBI nr
Match: XP_023544547.1 (protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023544548.1 protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.2 bits (1367), Expect = 2.1e-147
Identity = 263/269 (97.77%), Postives = 266/269 (98.88%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLTSRSIFSPSK HSPHARCLL+RLHPSISVRSC YSTASKYNKERPEVHPVISVDAHTS
Sbjct: 1   MLTSRSIFSPSKPHSPHARCLLQRLHPSISVRSCGYSTASKYNKERPEVHPVISVDAHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
           RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVV+GPVIGGPFALIDTEKR
Sbjct: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVQGPVIGGPFALIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
           IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRH+VKVRPVFVTIDPQRDN
Sbjct: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHSVKVRPVFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHLRAYLKEFDPRIIGLTG VAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN
Sbjct: 181 PSHLRAYLKEFDPRIIGLTGPVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKTAH 270
           LEVMRCFGIEYNAEELSQAILNALQKTAH
Sbjct: 241 LEVMRCFGIEYNAEELSQAILNALQKTAH 269

[Close]

BLAST of Carg00688 vs. NCBI nr
Match: XP_008440607.1 (PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 5.7e-129
Identity = 228/267 (85.39%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLT RSIFS SK HS  AR + +RLHPSISV SC+YST+SKY+KERPEVH ++SVD HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQARSVFQRLHPSISVLSCKYSTSSKYSKERPEVHSILSVDGHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
            SW TYIIPAAVMGFVGLAAFVHYNDERRAVLKGQG+T VN+VKGPVIGGPF+LIDTEKR
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTCVNIVKGPVIGGPFSLIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
            VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAI+ILES+H++KV P+FVTIDPQRDN
Sbjct: 121 NVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESKHSLKVLPIFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHLRAYLKEFD RIIGLTG VAAVRQMAQEYRVYFKK+EE+GNDYLID+SHKMYLLSPN
Sbjct: 181 PSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKT 268
           LEV+RCFG+EYNAEE+SQAILN LQKT
Sbjct: 241 LEVLRCFGMEYNAEEVSQAILNVLQKT 267

[Close]

BLAST of Carg00688 vs. NCBI nr
Match: XP_004143472.1 (PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis sativus] >XP_011657975.1 PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis sativus] >KGN48759.1 hypothetical protein Csa_6G500510 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 2.5e-124
Identity = 225/267 (84.27%), Postives = 243/267 (91.01%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLT RSIFS SK HS  A  + +RLHPSISV SC+ ST+SKY+KERPEV P++S D HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQAPSVFQRLHPSISVLSCKCSTSSKYSKERPEV-PLLSADGHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
            SW TYIIPAAVMGFVGLAAFVHYNDERRAVLKGQG+T  N+VKGPVIGGPF+LIDTEKR
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTCENIVKGPVIGGPFSLIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
            VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAI+ILESRH  KV P+FVTIDPQRDN
Sbjct: 121 NVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESRHKFKVLPIFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHLRAYLKEFD RIIGLTG VAAVRQMAQEYRVYFKK+EE+GNDYLID+SHKMYLLSPN
Sbjct: 181 PSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKT 268
           LEV+RCFG+EYNAEE+SQAILN LQKT
Sbjct: 241 LEVLRCFGMEYNAEEVSQAILNVLQKT 266

[Close]

BLAST of Carg00688 vs. TAIR10
Match: AT4G39740.1 (Thioredoxin superfamily protein)

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-84
Identity = 147/254 (57.87%), Postives = 186/254 (73.23%), Query Frame = 0


Query: 18  ARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHT---SRSWATYIIPAAVMG 77
           A   LRR  PS  ++S  Y  +++   E P+V P+      T   SRS A Y +PA ++G
Sbjct: 15  AASFLRRCGPSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLG 74

Query: 78  FVGLAAFVHYNDERRAVLKGQGST-------SVNVVKGPVIGGPFALIDTEKRIVTEKDL 137
           F G   F+HYNDERRAV +GQ S+       S   VKGP+IGGPF L+ TE +IVTE D 
Sbjct: 75  FAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIVTENDF 134

Query: 138 RGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDNPSHLRAY 197
            G W LLYFGY+ SPDV PEQL++MSKA++ LES+HN K+ PVFVT+DPQRD PSHL AY
Sbjct: 135 CGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKLESKHNEKILPVFVTLDPQRDTPSHLHAY 194

Query: 198 LKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCF 257
           LKEFD RI+GLTG  +A+RQMAQEYRVYFKK++EDG DYL+D+SH MYL++P +E++RCF
Sbjct: 195 LKEFDSRILGLTGTASAMRQMAQEYRVYFKKVQEDGEDYLVDTSHNMYLINPKMEIVRCF 254

Query: 258 GIEYNAEELSQAIL 262
           G+EYN +ELSQ +L
Sbjct: 255 GVEYNPDELSQELL 268

[Close]

BLAST of Carg00688 vs. TAIR10
Match: AT3G08950.1 (electron transport SCO1/SenC family protein)

HSP 1 Score: 164.9 bits (416), Expect = 7.1e-41
Identity = 74/210 (35.24%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 62  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGP-----VIGGPFALID 121
           SW ++ +  A     G     +Y+ +++  ++     S+ V +GP      IGGPF+LI 
Sbjct: 126 SWMSFFLLFA----TGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFSLIR 185

Query: 122 TEKRIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDP 181
            + + VTEK+L G WT+LYFG+T  PD+ P++L  ++ AI+ ++    V V PVF+++DP
Sbjct: 186 DDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFISVDP 245

Query: 182 QRDNPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYL 241
           +RD    +  Y+KEF P++IGLTG    ++ +A+ YRVY+ K EE+ +DYL+D S  MYL
Sbjct: 246 ERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMYL 305

Query: 242 LSPNLEVMRCFGIEYNAEELSQAILNALQK 267
           +SP +  ++ +G  ++ + L+  ++  +++
Sbjct: 306 MSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331

[Close]

BLAST of Carg00688 vs. Swiss-Prot
Match: sp|Q8LAL0|SCO12_ARATH (Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.2e-83
Identity = 147/254 (57.87%), Postives = 186/254 (73.23%), Query Frame = 0


Query: 18  ARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHT---SRSWATYIIPAAVMG 77
           A   LRR  PS  ++S  Y  +++   E P+V P+      T   SRS A Y +PA ++G
Sbjct: 15  AASFLRRCGPSKRIQSVNYCKSTRQGHEIPDVKPLFPTGGGTQAPSRSRARYAVPAILLG 74

Query: 78  FVGLAAFVHYNDERRAVLKGQGST-------SVNVVKGPVIGGPFALIDTEKRIVTEKDL 137
           F G   F+HYNDERRAV +GQ S+       S   VKGP+IGGPF L+ TE +IVTE D 
Sbjct: 75  FAGFVGFLHYNDERRAVPRGQASSNSGCGCGSNTTVKGPIIGGPFTLVSTENKIVTENDF 134

Query: 138 RGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDNPSHLRAY 197
            G W LLYFGY+ SPDV PEQL++MSKA++ LES+HN K+ PVFVT+DPQRD PSHL AY
Sbjct: 135 CGKWVLLYFGYSFSPDVGPEQLKMMSKAVDKLESKHNEKILPVFVTLDPQRDTPSHLHAY 194

Query: 198 LKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPNLEVMRCF 257
           LKEFD RI+GLTG  +A+RQMAQEYRVYFKK++EDG DYL+D+SH MYL++P +E++RCF
Sbjct: 195 LKEFDSRILGLTGTASAMRQMAQEYRVYFKKVQEDGEDYLVDTSHNMYLINPKMEIVRCF 254

Query: 258 GIEYNAEELSQAIL 262
           G+EYN +ELSQ +L
Sbjct: 255 GVEYNPDELSQELL 268

[Close]

BLAST of Carg00688 vs. Swiss-Prot
Match: sp|Q8VYP0|SCO11_ARATH (Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.3e-39
Identity = 74/210 (35.24%), Postives = 130/210 (61.90%), Query Frame = 0


Query: 62  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGP-----VIGGPFALID 121
           SW ++ +  A     G     +Y+ +++  ++     S+ V +GP      IGGPF+LI 
Sbjct: 126 SWMSFFLLFA----TGAGLVYYYDTQKKRHIEDINKNSIAVKEGPSAGKAAIGGPFSLIR 185

Query: 122 TEKRIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDP 181
            + + VTEK+L G WT+LYFG+T  PD+ P++L  ++ AI+ ++    V V PVF+++DP
Sbjct: 186 DDGKRVTEKNLMGKWTILYFGFTHCPDICPDELIKLAAAIDKIKENSGVDVVPVFISVDP 245

Query: 182 QRDNPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYL 241
           +RD    +  Y+KEF P++IGLTG    ++ +A+ YRVY+ K EE+ +DYL+D S  MYL
Sbjct: 246 ERDTVQQVHEYVKEFHPKLIGLTGSPEEIKSVARSYRVYYMKTEEEDSDYLVDHSIVMYL 305

Query: 242 LSPNLEVMRCFGIEYNAEELSQAILNALQK 267
           +SP +  ++ +G  ++ + L+  ++  +++
Sbjct: 306 MSPEMNFVKFYGKNHDVDSLTDGVVKEIRQ 331

[Close]

BLAST of Carg00688 vs. Swiss-Prot
Match: sp|O42899|SCO1_SCHPO (Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sco1 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 72/207 (34.78%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 59  TSRSWATYIIPAAVM--GFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALID 118
           T +SW   I   A++      +  + ++  E++ VL+ Q    +  +  P +GG F+LID
Sbjct: 46  TYQSWRGMISIRALLLAAATSVGLYAYFQHEKKKVLERQNDKVLATIGRPQLGGAFSLID 105

Query: 119 TEKRIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDP 178
                VT+ D +G ++L+YFG+T  PD+ P++L  MS AI+I+ +     V P+F+T DP
Sbjct: 106 HHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGDVVYPIFITCDP 165

Query: 179 QRDNPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYF---KKIEEDGNDYLIDSSHK 238
            RD P  +  YL++F+P+I+GLTG    ++ + +++RVYF   K I+   +DYL+D S  
Sbjct: 166 ARDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFSTPKNIDPKKDDYLVDHSVF 225

Query: 239 MYLLSPNLEVMRCFGIEYNAEELSQAI 261
            YL+ P  + +  FG    +E+L++AI
Sbjct: 226 FYLMDPEGKFIEVFGRNSTSEDLARAI 252

[Close]

BLAST of Carg00688 vs. Swiss-Prot
Match: sp|O75880|SCO1_HUMAN (Protein SCO1 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=SCO1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 69/201 (34.33%), Postives = 115/201 (57.21%), Query Frame = 0


Query: 62  SWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKRI 121
           SW +  I  A+ G + LA   H   E+   L+ +    +     P++GGPF+L       
Sbjct: 94  SWKSLAITFAIGGAL-LAGMKHVKKEKAEKLEKERQRHIG---KPLLGGPFSLTTHTGER 153

Query: 122 VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNV-KVRPVFVTIDPQRDN 181
            T+KD  G W L+YFG+T  PDV PE+L+ M + ++ ++S   +  + P+F++IDP+RD 
Sbjct: 154 KTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDT 213

Query: 182 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKK-IEEDGNDYLIDSSHKMYLLSP 241
              +  Y+KEF P+++GLTG    V Q+A+ YRVY+    +++  DY++D +  MYL+ P
Sbjct: 214 KEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGP 273

Query: 242 NLEVMRCFGIEYNAEELSQAI 261
           + E +  FG      E++ +I
Sbjct: 274 DGEFLDYFGQNKRKGEIAASI 290

[Close]

BLAST of Carg00688 vs. Swiss-Prot
Match: sp|P38072|SCO2_YEAST (Protein SCO2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCO2 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 63/185 (34.05%), Postives = 108/185 (58.38%), Query Frame = 0


Query: 84  YNDERRAVLKGQGSTSVNVVKGPV-IGGPFALIDTEKRIVTEKDLRGNWTLLYFGYTSSP 143
           Y   +R +L+ +     N   G V +GGPF L D   +  TE++L+G +++LYFG++  P
Sbjct: 96  YLSRKRRLLETEKEADANRAYGSVALGGPFNLTDFNGKPFTEENLKGKFSILYFGFSHCP 155

Query: 144 DVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDNPSHLRAYLKEFDPRIIGLTGQV 203
           D+ PE+L  ++  I+ L+ + ++K++P+F++ DP RD P  L+ YL +F P IIGLTG  
Sbjct: 156 DICPEELDRLTYWISELDDKDHIKIQPLFISCDPARDTPDVLKEYLSDFHPAIIGLTGTY 215

Query: 204 AAVRQMAQEYRVYFK--KIEEDGNDYLIDSSHKMYLLSPNLEVMRCFGIEYNAEELSQAI 263
             V+ + ++Y+VYF   +  +   DYL+D S   YL+ P  + +   G  Y+ +   + I
Sbjct: 216 DQVKSVCKKYKVYFSTPRDVKPNQDYLVDHSIFFYLIDPEGQFIDALGRNYDEQSGLEKI 275

Query: 264 LNALQ 266
              +Q
Sbjct: 276 REQIQ 280

[Close]

BLAST of Carg00688 vs. TrEMBL
Match: tr|A0A1S3B131|A0A1S3B131_CUCME (protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 3.8e-129
Identity = 228/267 (85.39%), Postives = 249/267 (93.26%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLT RSIFS SK HS  AR + +RLHPSISV SC+YST+SKY+KERPEVH ++SVD HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQARSVFQRLHPSISVLSCKYSTSSKYSKERPEVHSILSVDGHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
            SW TYIIPAAVMGFVGLAAFVHYNDERRAVLKGQG+T VN+VKGPVIGGPF+LIDTEKR
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTCVNIVKGPVIGGPFSLIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
            VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAI+ILES+H++KV P+FVTIDPQRDN
Sbjct: 121 NVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESKHSLKVLPIFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHLRAYLKEFD RIIGLTG VAAVRQMAQEYRVYFKK+EE+GNDYLID+SHKMYLLSPN
Sbjct: 181 PSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKT 268
           LEV+RCFG+EYNAEE+SQAILN LQKT
Sbjct: 241 LEVLRCFGMEYNAEEVSQAILNVLQKT 267

[Close]

BLAST of Carg00688 vs. TrEMBL
Match: tr|A0A0A0KIW8|A0A0A0KIW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.6e-124
Identity = 225/267 (84.27%), Postives = 243/267 (91.01%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           MLT RSIFS SK HS  A  + +RLHPSISV SC+ ST+SKY+KERPEV P++S D HTS
Sbjct: 1   MLTFRSIFSTSKHHSRQAPSVFQRLHPSISVLSCKCSTSSKYSKERPEV-PLLSADGHTS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTSVNVVKGPVIGGPFALIDTEKR 120
            SW TYIIPAAVMGFVGLAAFVHYNDERRAVLKGQG+T  N+VKGPVIGGPF+LIDTEKR
Sbjct: 61  SSWTTYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGNTCENIVKGPVIGGPFSLIDTEKR 120

Query: 121 IVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRDN 180
            VTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAI+ILESRH  KV P+FVTIDPQRDN
Sbjct: 121 NVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAIDILESRHKFKVLPIFVTIDPQRDN 180

Query: 181 PSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSPN 240
           PSHLRAYLKEFD RIIGLTG VAAVRQMAQEYRVYFKK+EE+GNDYLID+SHKMYLLSPN
Sbjct: 181 PSHLRAYLKEFDSRIIGLTGPVAAVRQMAQEYRVYFKKVEEEGNDYLIDTSHKMYLLSPN 240

Query: 241 LEVMRCFGIEYNAEELSQAILNALQKT 268
           LEV+RCFG+EYNAEE+SQAILN LQKT
Sbjct: 241 LEVLRCFGMEYNAEEVSQAILNVLQKT 266

[Close]

BLAST of Carg00688 vs. TrEMBL
Match: tr|A0A2I4H3R9|A0A2I4H3R9_9ROSI (protein SCO1 homolog 2, mitochondrial OS=Juglans regia OX=51240 GN=LOC109013237 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 9.3e-96
Identity = 171/268 (63.81%), Postives = 213/268 (79.48%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           M  SR IF  SK  S  A  LL+R HPS  V++C YS +S Y+  +  +HPVI V+    
Sbjct: 13  MPVSRFIFFSSKRRSTDAFNLLKRCHPSRRVQTCNYSKSSGYSNGKTRIHPVIPVETRAP 72

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQGSTS-VNVVKGPVIGGPFALIDTEK 120
           RSW  Y+IPAA++GF GLAAFVHYNDERRA+LKGQGS S  N V+GP IGGPF LIDT+ 
Sbjct: 73  RSWGAYVIPAAILGFAGLAAFVHYNDERRAILKGQGSKSGGNTVRGPTIGGPFTLIDTKN 132

Query: 121 RIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRD 180
           +IVTE+D  G W LLYFGYTSSPDV PEQ++I++KA++ILES+++ ++ PVFVTIDPQRD
Sbjct: 133 QIVTEQDFHGKWVLLYFGYTSSPDVGPEQVRIIAKAVDILESKYHNEILPVFVTIDPQRD 192

Query: 181 NPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSP 240
             + LRAYL+EFD RI+GLTG V+A+RQMAQEYR++FKKIEE+G+DYL++SSH MYLL+P
Sbjct: 193 TAAQLRAYLREFDSRILGLTGPVSAIRQMAQEYRIFFKKIEEEGDDYLVESSHNMYLLNP 252

Query: 241 NLEVMRCFGIEYNAEELSQAILNALQKT 268
            LEV RCFG+EYNAEELS+AI   L+ T
Sbjct: 253 KLEVARCFGVEYNAEELSEAITKELRST 280

[Close]

BLAST of Carg00688 vs. TrEMBL
Match: tr|A0A2P5AEA1|A0A2P5AEA1_9ROSA (Copper chaperone SCO1/SenC OS=Trema orientalis OX=63057 GN=TorRG33x02_352540 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.6e-92
Identity = 174/267 (65.17%), Postives = 212/267 (79.40%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           M  SR +F  S+ HS  A   LRR  PS  ++S  Y  +SK+   + + +PV++V+    
Sbjct: 1   MPISRFLFFSSRRHSVEA---LRRCGPSKRIQSRNYVKSSKHANGKLDSNPVMNVETQAP 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQG-STSVNVVKGPVIGGPFALIDTEK 120
           RSW TY+IPAA++GFVGLAAFVHYNDERRAV KGQG S+S N VKGP+IGGPF LIDTE 
Sbjct: 61  RSWGTYVIPAALLGFVGLAAFVHYNDERRAVPKGQGNSSSGNTVKGPIIGGPFTLIDTEN 120

Query: 121 RIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQRD 180
             VTE++  G W L+YFG T SPDV PEQ+QIM+KAI+ LESRHNVKV PVFVTIDPQRD
Sbjct: 121 HTVTERNFLGKWVLIYFGNTFSPDVGPEQVQIMAKAIDKLESRHNVKVLPVFVTIDPQRD 180

Query: 181 NPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLLSP 240
            PS LRAYLKEFDPRIIGLTG V+AVRQMAQEYRVYF+K+EE+ +DYL++SSH MYLL+P
Sbjct: 181 TPSQLRAYLKEFDPRIIGLTGPVSAVRQMAQEYRVYFRKVEEERDDYLVESSHNMYLLNP 240

Query: 241 NLEVMRCFGIEYNAEELSQAILNALQK 267
           ++EV+R FG+EYNA+ELS AIL  L++
Sbjct: 241 SMEVVRVFGVEYNADELSDAILKELRR 264

[Close]

BLAST of Carg00688 vs. TrEMBL
Match: tr|A0A1Q3D7W7|A0A1Q3D7W7_CEPFO (SCO1-SenC domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31974 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.2e-92
Identity = 163/270 (60.37%), Postives = 215/270 (79.63%), Query Frame = 0


Query: 1   MLTSRSIFSPSKLHSPHARCLLRRLHPSISVRSCRYSTASKYNKERPEVHPVISVDAHTS 60
           M+  R +F  SK H    + LL+R  PS  ++SC Y+ ++K++  + +V P++S+++  S
Sbjct: 1   MIIYRFLFFSSKHHP--RQSLLQRFGPSQRIQSCSYAKSTKHSYRKSDVDPLMSIESPAS 60

Query: 61  RSWATYIIPAAVMGFVGLAAFVHYNDERRAVLKGQG---STSVNVVKGPVIGGPFALIDT 120
           RSW TY+IPA+V+GF GLAAF+HYNDE+RAVLKG G   +   + +KGP IGGPF LIDT
Sbjct: 61  RSWITYVIPASVLGFAGLAAFLHYNDEKRAVLKGSGQGNNCGCDTIKGPFIGGPFTLIDT 120

Query: 121 EKRIVTEKDLRGNWTLLYFGYTSSPDVVPEQLQIMSKAINILESRHNVKVRPVFVTIDPQ 180
           E R VTE+D  GNW LLYFGYTSSPDV PEQL+IM+KAI+ LES+H++KV PVFVT+DPQ
Sbjct: 121 ENRYVTERDFLGNWILLYFGYTSSPDVGPEQLKIMAKAIDTLESKHSLKVLPVFVTLDPQ 180

Query: 181 RDNPSHLRAYLKEFDPRIIGLTGQVAAVRQMAQEYRVYFKKIEEDGNDYLIDSSHKMYLL 240
           RD  S LRAYL+EFD R++GLTG  +A+RQMAQ+YRVYFKK+EE+GNDYL+D+ H MYL+
Sbjct: 181 RDTTSQLRAYLREFDTRVVGLTGASSAIRQMAQQYRVYFKKVEEEGNDYLVDTFHNMYLM 240

Query: 241 SPNLEVMRCFGIEYNAEELSQAILNALQKT 268
           SP +EV+RCFG+EY+ EELS+AIL  L++T
Sbjct: 241 SPKMEVVRCFGVEYSPEELSEAILTELRRT 268

The following BLAST results are available for this feature:

BLAST of Carg00688 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949607.1	8.4e-149	98.51	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita moschata]	[more]
XP_022978543.1	1.2e-147	97.77	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita maxima]	[more]
XP_023544547.1	2.1e-147	97.77	protein SCO1 homolog 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >X...	[more]
XP_008440607.1	5.7e-129	85.39	PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis melo]	[more]
XP_004143472.1	2.5e-124	84.27	PREDICTED: protein SCO1 homolog 2, mitochondrial [Cucumis sativus] >XP_011657975...	[more]

BLAST of Carg00688 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39740.1	4.0e-84	57.87	Thioredoxin superfamily protein	[more]
AT3G08950.1	7.1e-41	35.24	electron transport SCO1/SenC family protein	[more]

BLAST of Carg00688 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LAL0\|SCO12_ARATH	7.2e-83	57.87	Protein SCO1 homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC2 PE...	[more]
sp\|Q8VYP0\|SCO11_ARATH	1.3e-39	35.24	Protein SCO1 homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HCC1 PE...	[more]
sp\|O42899\|SCO1_SCHPO	1.2e-34	34.78	Protein sco1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]
sp\|O75880\|SCO1_HUMAN	2.0e-29	34.33	Protein SCO1 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=SCO1 PE=1 SV=1	[more]
sp\|P38072\|SCO2_YEAST	2.0e-29	34.05	Protein SCO2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]

BLAST of Carg00688 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B131\|A0A1S3B131_CUCME	3.8e-129	85.39	protein SCO1 homolog 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484980 PE...	[more]
tr\|A0A0A0KIW8\|A0A0A0KIW8_CUCSA	1.6e-124	84.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500510 PE=4 SV=1	[more]
tr\|A0A2I4H3R9\|A0A2I4H3R9_9ROSI	9.3e-96	63.81	protein SCO1 homolog 2, mitochondrial OS=Juglans regia OX=51240 GN=LOC109013237 ...	[more]
tr\|A0A2P5AEA1\|A0A2P5AEA1_9ROSA	1.6e-92	65.17	Copper chaperone SCO1/SenC OS=Trema orientalis OX=63057 GN=TorRG33x02_352540 PE=...	[more]
tr\|A0A1Q3D7W7\|A0A1Q3D7W7_CEPFO	2.2e-92	60.37	SCO1-SenC domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR003782	SCO1/SenC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00688-RA	Carg00688-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003782	Copper chaperone SCO1/SenC	PFAM	PF02630	SCO1-SenC	coord: 99..247 e-value: 7.2E-41 score: 139.8
IPR003782	Copper chaperone SCO1/SenC	PANTHER	PTHR12151	SCO1/SENC	coord: 18..267
IPR003782	Copper chaperone SCO1/SenC	CDD	cd02968	SCO	coord: 108..248 e-value: 1.9915E-58 score: 184.344
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 93..267 e-value: 1.2E-48 score: 167.0
None	No IPR available	PANTHER	PTHR12151:SF1	PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL	coord: 18..267
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 106..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00688	Csa6G500510	Cucumber (Chinese Long) v2	carcuB0441
Carg00688	MELO3C007766	Melon (DHL92) v3.5.1	carmeB0414
Carg00688	ClCG01G018870	Watermelon (Charleston Gray)	carwcgB0397
Carg00688	CSPI06G30320	Wild cucumber (PI 183967)	carcpiB0446
Carg00688	Cucsa.104480	Cucumber (Gy14) v1	carcgyB0467
Carg00688	CmaCh03G007990	Cucurbita maxima (Rimu)	carcmaB0567
Carg00688	CmoCh03G008370	Cucurbita moschata (Rifu)	carcmoB0551
Carg00688	Lsi01G007570	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00688	Cp4.1LG10g01330	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00688	CsGy6G029810	Cucumber (Gy14) v2	carcgybB0418
Carg00688	MELO3C007766.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00688	CsaV3_6G045530	Cucumber (Chinese Long) v3	carcucB0442
Carg00688	Cla97C01G018330	Watermelon (97103) v2	carwmbB0426
Carg00688	Bhi03G000921	Wax gourd	carwgoB0491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00688	Silver-seed gourd	carcarB426
Carg00688	Silver-seed gourd	carcarB431
Carg00688	Cucurbita maxima (Rimu)	carcmaB0571
Carg00688	Cucurbita moschata (Rifu)	carcmoB0554
Carg00688	Cucurbita pepo (Zucchini)	carcpeB0557
Carg00688	Cucurbita pepo (Zucchini)	carcpeB0562
Carg00688	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00688	Bottle gourd (USVL1VR-Ls)	carlsiB370
Carg00688	Watermelon (97103) v1	carwmB0407
Carg00688	Watermelon (97103) v2	carwmbB0431
Carg00688	Wax gourd	carwgoB0486