Cucsa.097160 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.097160
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Phytochrome A-associated F-box protein
Location	scaffold00919 : 2503957 .. 2505713 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAATTCTCCTGCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATtCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCCAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAaGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTAGCGCTTTTGTCTATAATTTAATATCATTTATTGCTTAACTTCTTTCCTTTTCTTGCCCGTTTCCATGAACTGAACACGAGTTTCCATTAAAACCGTTGCTATAGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAAATTTTGAGGACAAGAAGATATTTTAAGGAAATTTCCAGTTATAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTGTGTTTGGATGATCTA

mRNA sequence

TGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAgacgacgacgacgacgacgacACCCTTCCACTTTCACCACCACCGACCCCTTTTCtctctttcttcttcttcttcttcttcttcACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAATTCTCCTGCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCCAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAAATTTTGAGGACAAGAAGATATTTTAAGGAAATTTCCAGTTATAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTGTGTTTGGATGATCTA

Coding sequence (CDS)

ATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAATTCTCCTGCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATtCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCCAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAaGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

Protein sequence

MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT*

Homology

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BLAST of Cucsa.097160 vs. Swiss-Prot
Match: EID1_ARATH (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana GN=EID1 PE=1 SV=2)

HSP 1 Score: 433.3 bits (1113), Expect = 2.7e-120
Identity = 218/354 (61.58%), Postives = 257/354 (72.60%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFS  +RN+C KT+C +AIP+++S
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 106 DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 165
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 166 GPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMY 225
           GPD+N            +  P++T L  +N +  +    S   +   WSLYDDLY DT+ 
Sbjct: 121 GPDQNL-----------DPKPTTTDL-ALNDEEVSKPVGSGLETTSFWSLYDDLYTDTI- 180

Query: 226 NDSEAP---DVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQG 285
               AP   D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQG
Sbjct: 181 ---PAPPPEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQG 240

Query: 286 NKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-L 345
           NKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L
Sbjct: 241 NKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGL 300

Query: 346 NCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
            CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 KCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

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BLAST of Cucsa.097160 vs. TrEMBL
Match: A0A0A0KWJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001740 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 2.0e-199
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225
           PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 226 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 285
           KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 286 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 345
           GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 346 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 334

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BLAST of Cucsa.097160 vs. TrEMBL
Match: M5VNE0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017065mg PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 3.3e-141
Identity = 242/330 (73.33%), Postives = 270/330 (81.82%), Query Frame = 1


Query: 50  LFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLV 109
           LFS L DD++L I FKLE+DPRNWARLAC  TKFS  IRN+C KTKCS AIPS+VSDLL 
Sbjct: 1   LFSQLSDDVVLKILFKLEEDPRNWARLACSCTKFSSLIRNVCCKTKCSKAIPSVVSDLLS 60

Query: 110 GDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESN 169
           G S P GGWA+LHKLAVCCPGL+HSGVL ENSDFGLERE+GPDENY +L SS  ++P++ 
Sbjct: 61  GSSAPPGGWAALHKLAVCCPGLLHSGVLFENSDFGLEREVGPDENYRRLDSSPAAKPQTE 120

Query: 170 PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEK 229
           PSS       S + A+    AS  +C+WSL+DDLY DT+Y+DSEA   ++       VEK
Sbjct: 121 PSS-------SQIGANHEVGASGPNCSWSLFDDLYFDTVYDDSEAQ--VEAAQDQASVEK 180

Query: 230 GVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVH 289
           G      EF   K+RK+CRSMRSH ASGVWNLSREQGNKLL SRFRGD LYICDWP CVH
Sbjct: 181 GGVRVGGEFSRCKKRKVCRSMRSHSASGVWNLSREQGNKLLHSRFRGDCLYICDWPFCVH 240

Query: 290 IEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFG 349
           IEEKRNYMLFRGIFK+FKGS VWRTI+DGNR+KIDLNCAFCSCKETWDLHSAFCLRRVFG
Sbjct: 241 IEEKRNYMLFRGIFKDFKGSQVWRTIRDGNRSKIDLNCAFCSCKETWDLHSAFCLRRVFG 300

Query: 350 YHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           YHDDGEPVVRAYVCENGHVSGAWTDLPLY+
Sbjct: 301 YHDDGEPVVRAYVCENGHVSGAWTDLPLYS 321

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BLAST of Cucsa.097160 vs. TrEMBL
Match: W9T2Y8_9ROSA (Phytochrome A-associated F-box protein OS=Morus notabilis GN=L484_001253 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.6e-138
Identity = 243/335 (72.54%), Postives = 269/335 (80.30%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           M  S+F+ L DD++LNIF KL+DDPRNWARLACV TKFS  IRN+CWK KC  AIPS +S
Sbjct: 1   MEASMFTKLSDDVVLNIFAKLDDDPRNWARLACVCTKFSSLIRNVCWKNKCLAAIPSTIS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLL   S P GGWASLHKLAVCCPGLVHSGVLLENSDFGLERE+GPD+NY +L  SQ   
Sbjct: 61  DLLSSASDPPGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREIGPDDNYRQLAPSQTL- 120

Query: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225
             ++PSS       S  SA +   A  SDC+WSL+DDLY DT+Y+ SE  D    QI   
Sbjct: 121 --TDPSS-------SQFSADSEGIAPNSDCSWSLFDDLYYDTVYHASEGQD--SAQIAEE 180

Query: 226 KV-EKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
            V EKGVF ++   C +KRR+ICR MRSHLASGVWNLSREQGNKLL SRFRGDSLYICDW
Sbjct: 181 VVIEKGVFKSENREC-AKRRRICRPMRSHLASGVWNLSREQGNKLLHSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRG+FK+FK S VWRT+KDGNR  IDLNCAFC CK+TWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGVFKDFKASQVWRTVKDGNRTAIDLNCAFCGCKDTWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RR FG+HDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRGFGFHDDGEPVVRAYVCENGHVSGAWTDLPLYT 322

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BLAST of Cucsa.097160 vs. TrEMBL
Match: A0A061DQS2_THECC (F-box family protein OS=Theobroma cacao GN=TCM_004649 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.7e-134
Identity = 232/334 (69.46%), Postives = 259/334 (77.54%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           M ++ FS LPDD++LNIF KLEDDPR+WA LA V  KFS  IRN CWK KCS  IP++ +
Sbjct: 1   MTETPFSKLPDDVVLNIFSKLEDDPRSWACLASVCAKFSSLIRNTCWKQKCSKTIPAVCA 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLL   S PAGGWASLHKL+VCCPGL H+GVLLENSDFGLERELGPDENY K  +SQ   
Sbjct: 61  DLLGSSSAPAGGWASLHKLSVCCPGLTHAGVLLENSDFGLERELGPDENYDKPANSQALT 120

Query: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225
           P ++P S+       + + +       SDC WSL+DDLY DT+YN S++ D    +    
Sbjct: 121 PSTDPCSS---RTEGNPNPNPEVDVPESDCPWSLFDDLYYDTVYNASDSTDGYPEET--- 180

Query: 226 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 285
            ++ G     REF   KRRK  RS+RSHLASGVWNLSREQGNKLL SRFRGD LYICDWP
Sbjct: 181 -IDNGAIKIGREFSSCKRRKFSRSLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWP 240

Query: 286 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 345
           GCVH EEKRNYMLFRGIFKNFK S VWRTI DGNR KI+LNCAFCSCKETWDLHSAFCLR
Sbjct: 241 GCVHAEEKRNYMLFRGIFKNFKKSRVWRTINDGNRGKINLNCAFCSCKETWDLHSAFCLR 300

Query: 346 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RVFGYHDDGEPVVRA+VCENGHVSGAWTDLPLYT
Sbjct: 301 RVFGYHDDGEPVVRAFVCENGHVSGAWTDLPLYT 327

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BLAST of Cucsa.097160 vs. TrEMBL
Match: V4TVJ1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021114mg PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.1e-133
Identity = 235/338 (69.53%), Postives = 267/338 (78.99%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA++LFS L DD++LNIFFKLEDDPRNWARLACV  KFS  +RNICWKTKCS +IP++V+
Sbjct: 1   MAETLFSKLSDDVVLNIFFKLEDDPRNWARLACVCVKFSSLVRNICWKTKCSMSIPAVVA 60

Query: 106 DLLVGDS-IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYS 165
           DL+  +S +P GGW+SLHKL+VCCPGL+H+GVLLENSDFGLERELGPD +Y    +S   
Sbjct: 61  DLISPNSGVPPGGWSSLHKLSVCCPGLLHAGVLLENSDFGLERELGPDSDYQSCSTSAIQ 120

Query: 166 QPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
                P+ST      +   A +S   S +DC+WSL+DDLY DT+Y+ SE+ D      GS
Sbjct: 121 -----PTSTT-----TTAEACSSNLNSVTDCSWSLFDDLYYDTVYDKSESHDDDGGGDGS 180

Query: 226 TKVE---KGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI 285
             VE   K       E    K+RKICRS RSHLASGVWNL REQGNKLL SRFRGD LYI
Sbjct: 181 LVVEDVDKCEVKVGGESATCKKRKICRSFRSHLASGVWNLCREQGNKLLASRFRGDCLYI 240

Query: 286 CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSA 345
           CDWPGC+H EEKRNYMLFRGIFKNFK S VWRTI DGNR+KID+NCAFC+CKETWDLHSA
Sbjct: 241 CDWPGCLHTEEKRNYMLFRGIFKNFKRSRVWRTINDGNRSKIDVNCAFCNCKETWDLHSA 300

Query: 346 FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 328

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BLAST of Cucsa.097160 vs. TAIR10
Match: AT4G02440.1 (AT4G02440.1 F-box family protein)

HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-121
Identity = 218/354 (61.58%), Postives = 257/354 (72.60%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFS  +RN+C KT+C +AIP+++S
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 106 DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 165
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 166 GPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMY 225
           GPD+N            +  P++T L  +N +  +    S   +   WSLYDDLY DT+ 
Sbjct: 121 GPDQNL-----------DPKPTTTDL-ALNDEEVSKPVGSGLETTSFWSLYDDLYTDTI- 180

Query: 226 NDSEAP---DVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQG 285
               AP   D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQG
Sbjct: 181 ---PAPPPEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQG 240

Query: 286 NKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-L 345
           NKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L
Sbjct: 241 NKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGL 300

Query: 346 NCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
            CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 KCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of Cucsa.097160 vs. TAIR10
Match: AT5G15440.1 (AT5G15440.1 EID1-like 1)

HSP 1 Score: 50.1 bits (118), Expect = 3.6e-06
Identity = 42/127 (33.07%), Postives = 60/127 (47.24%), Query Frame = 1


Query: 262 SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTIKDGN 321
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I +  
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIIN-- 182

Query: 322 RNKIDLN----CAFCSCKETWDLHSAFCLR-----RVFGYHDDGEPVVRAYVCENGHVSG 378
              +  +    C +C  K  W +  A  +      R+  Y D     +  +VC NGH+ G
Sbjct: 183 -KAVPFHPSEVCPYCKAK-LWSMLQAKIIPQSACIRLEAYED----CIEYFVCLNGHLLG 239

HSP 2 Score: 48.9 bits (115), Expect = 8.0e-06
Identity = 27/84 (32.14%), Postives = 40/84 (47.62%), Query Frame = 1


Query: 54  LPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDL-LVGDS 113
           L +D+LL +F  L  +P+  A L+CV   F    + + WK  C    P ++ DL   G  
Sbjct: 22  LNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGSH 81

Query: 114 IPAGGWASLHKLAVCCPGLVHSGV 137
              G W +L KL + C G    G+
Sbjct: 82  CIDGNWRALGKLLIYCSGCTQGGL 105

[Close]

BLAST of Cucsa.097160 vs. NCBI nr
Match: gi|778689292|ref|XP_011652932.1| (PREDICTED: phytochrome A-associated F-box protein [Cucumis sativus])

HSP 1 Score: 793.5 bits (2048), Expect = 1.6e-226
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 1


Query: 1   MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL 60
           MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL
Sbjct: 1   MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL 60

Query: 61  NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS 120
           NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS
Sbjct: 61  NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS 120

Query: 121 LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS 180
           LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS
Sbjct: 121 LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS 180

Query: 181 DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV 240
           DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV
Sbjct: 181 DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV 240

Query: 241 SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR 300
           SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR
Sbjct: 241 SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR 300

Query: 301 GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA 360
           GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA
Sbjct: 301 GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA 360

Query: 361 YVCENGHVSGAWTDLPLYT 380
           YVCENGHVSGAWTDLPLYT
Sbjct: 361 YVCENGHVSGAWTDLPLYT 379

[Close]

BLAST of Cucsa.097160 vs. NCBI nr
Match: gi|700197649|gb|KGN52807.1| (hypothetical protein Csa_4G001740 [Cucumis sativus])

HSP 1 Score: 703.0 bits (1813), Expect = 2.9e-199
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225
           PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 226 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 285
           KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 286 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 345
           GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 346 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 334

[Close]

BLAST of Cucsa.097160 vs. NCBI nr
Match: gi|659108707|ref|XP_008454346.1| (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo])

HSP 1 Score: 676.8 bits (1745), Expect = 2.2e-191
Identity = 326/335 (97.31%), Postives = 329/335 (98.21%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 166 PESNP-SSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
           PES+P SSTALFEVNSDLS  ASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDLS--ASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 226 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of Cucsa.097160 vs. NCBI nr
Match: gi|657955099|ref|XP_008369011.1| (PREDICTED: phytochrome A-associated F-box protein-like [Malus domestica])

HSP 1 Score: 515.0 bits (1325), Expect = 1.1e-142
Identity = 246/343 (71.72%), Postives = 276/343 (80.47%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA +LFS L DD++LNI FKLE+DPRNWARLAC  TKFS  IRN+CWKTKC   IPS+VS
Sbjct: 1   MAGTLFSKLSDDVVLNILFKLEEDPRNWARLACSCTKFSSMIRNVCWKTKCYKVIPSVVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQY-S 165
            LL G + PAGGWA+LHKLAVCCPGL+HSGVL ENSDFGLERELGPDENY +L S+   +
Sbjct: 61  ALLTGSTEPAGGWAALHKLAVCCPGLLHSGVLFENSDFGLERELGPDENYRRLDSNPVXA 120

Query: 166 QPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLD-PQIG 225
               NP + A    +S + A+    +S +DC+WSL+DDLY DT+YNDSEA    D PQ+ 
Sbjct: 121 SXAXNPPTEAS---SSQIGANQEVGSSGNDCSWSLFDDLYFDTVYNDSEAHQEQDNPQLE 180

Query: 226 STK-------VEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRG 285
           S         VE G      EF + K+RK+CR MRSHLASGVWNLSREQGNKLL SRFRG
Sbjct: 181 SAAAEADQVAVENGAVRVGGEFSICKKRKVCRPMRSHLASGVWNLSREQGNKLLHSRFRG 240

Query: 286 DSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETW 345
           D LYICDWPGCVHIEEKRNYMLFRGIFK+FKGS VWRTIKDGNR+KIDLNCAFC+CK+TW
Sbjct: 241 DRLYICDWPGCVHIEEKRNYMLFRGIFKDFKGSQVWRTIKDGNRSKIDLNCAFCACKDTW 300

Query: 346 DLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           DLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY+
Sbjct: 301 DLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYS 340

[Close]

BLAST of Cucsa.097160 vs. NCBI nr
Match: gi|657989026|ref|XP_008386700.1| (PREDICTED: phytochrome A-associated F-box protein [Malus domestica])

HSP 1 Score: 512.3 bits (1318), Expect = 7.2e-142
Identity = 244/349 (69.91%), Postives = 276/349 (79.08%), Query Frame = 1


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA +LFS L DD+++NI FKLE+DPRNWARLAC  TKFS  IRN+CWKTKC   IPS+VS
Sbjct: 1   MAGTLFSKLSDDVVVNILFKLEEDPRNWARLACSCTKFSSMIRNVCWKTKCYKVIPSVVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYS- 165
           DLL G S P GGWA+LHKLAVCCPGL+HSGVL ENSDFGLERELGPDE+Y +L SS    
Sbjct: 61  DLLAGSSEPPGGWAALHKLAVCCPGLLHSGVLFENSDFGLERELGPDEDYRRLDSSPLGV 120

Query: 166 QPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPD-------- 225
            P + P + A    +S + A+    +S +DC+WSL+DDLY DT+YNDSEA D        
Sbjct: 121 SPAAKPPTEAS---SSQIGANQEGGSSGNDCSWSLFDDLYFDTVYNDSEAHDQEQDNSQL 180

Query: 226 ------VLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLL 285
                   + Q+ S  V+ G      EF + K+RK+CR MRSHLASGVWNLSREQGNKLL
Sbjct: 181 ESAATEAAEDQV-SVDVDNGSVRVGSEFSICKKRKVCRPMRSHLASGVWNLSREQGNKLL 240

Query: 286 RSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFC 345
            SRFRGD LYICDWPGCVHIEEKRNYMLFRGIFK+FKGS VWRTIKDGNR+KIDLNCAFC
Sbjct: 241 HSRFRGDRLYICDWPGCVHIEEKRNYMLFRGIFKDFKGSQVWRTIKDGNRSKIDLNCAFC 300

Query: 346 SCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           +CK+TWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY+
Sbjct: 301 TCKDTWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYS 345

The following BLAST results are available for this feature:

BLAST of Cucsa.097160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EID1_ARATH	2.7e-120	61.58	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana GN=EID1 PE=1 SV=2	[more]

BLAST of Cucsa.097160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWJ3_CUCSA	2.0e-199	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001740 PE=4 SV=1	[more]
M5VNE0_PRUPE	3.3e-141	73.33	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017065mg PE=4 S...	[more]
W9T2Y8_9ROSA	2.6e-138	72.54	Phytochrome A-associated F-box protein OS=Morus notabilis GN=L484_001253 PE=4 SV...	[more]
A0A061DQS2_THECC	1.7e-134	69.46	F-box family protein OS=Theobroma cacao GN=TCM_004649 PE=4 SV=1	[more]
V4TVJ1_9ROSI	1.1e-133	69.53	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021114mg PE=4 SV=1	[more]

BLAST of Cucsa.097160 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02440.1	1.5e-121	61.58	F-box family protein	[more]
AT5G15440.1	3.6e-06	33.07	EID1-like 1	[more]

BLAST of Cucsa.097160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689292\|ref\|XP_011652932.1\|	1.6e-226	100.00	PREDICTED: phytochrome A-associated F-box protein [Cucumis sativus]	[more]
gi\|700197649\|gb\|KGN52807.1\|	2.9e-199	100.00	hypothetical protein Csa_4G001740 [Cucumis sativus]	[more]
gi\|659108707\|ref\|XP_008454346.1\|	2.2e-191	97.31	PREDICTED: phytochrome A-associated F-box protein [Cucumis melo]	[more]
gi\|657955099\|ref\|XP_008369011.1\|	1.1e-142	71.72	PREDICTED: phytochrome A-associated F-box protein-like [Malus domestica]	[more]
gi\|657989026\|ref\|XP_008386700.1\|	7.2e-142	69.91	PREDICTED: phytochrome A-associated F-box protein [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048366	leaf development
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.097160.1	Cucsa.097160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 47..106 score: 1.9
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 50..98 score: 6.
None	No IPR available	PANTHER	PTHR31348	FAMILY NOT NAMED	coord: 45..141 score: 1.8E-163coord: 248..379 score: 1.8E
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 248..379 score: 1.8E-163coord: 45..141 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.097160	Cla017415	Watermelon (97103) v1	cgywmB115
Cucsa.097160	Csa4G001740	Cucumber (Chinese Long) v2	cgycuB102
Cucsa.097160	MELO3C017961	Melon (DHL92) v3.5.1	cgymeB111
Cucsa.097160	ClCG10G010870	Watermelon (Charleston Gray)	cgywcgB113
Cucsa.097160	CSPI04G00790	Wild cucumber (PI 183967)	cgycpiB103
Cucsa.097160	CmaCh14G008980	Cucurbita maxima (Rimu)	cgycmaB0194
Cucsa.097160	CmaCh01G003150	Cucurbita maxima (Rimu)	cgycmaB0199
Cucsa.097160	CmoCh01G003290	Cucurbita moschata (Rifu)	cgycmoB0192
Cucsa.097160	CmoCh14G009270	Cucurbita moschata (Rifu)	cgycmoB0187
Cucsa.097160	Lsi03G010690	Bottle gourd (USVL1VR-Ls)	cgylsiB111
Cucsa.097160	Cp4.1LG02g16260	Cucurbita pepo (Zucchini)	cgycpeB0194
Cucsa.097160	MELO3C017961.2	Melon (DHL92) v3.6.1	cgymedB109
Cucsa.097160	CsaV3_4G000750	Cucumber (Chinese Long) v3	cgycucB102
Cucsa.097160	Cla97C10G193780	Watermelon (97103) v2	cgywmbB108
Cucsa.097160	Bhi11G001002	Wax gourd	cgywgoB125
Cucsa.097160	Carg07407	Silver-seed gourd	carcgyB0855

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.097160	Cucurbita pepo (Zucchini)	cgycpeB0185
Cucsa.097160	Cucurbita pepo (Zucchini)	cgycpeB0189
Cucsa.097160	Cucurbita pepo (Zucchini)	cgycpeB0198
Cucsa.097160	Bottle gourd (USVL1VR-Ls)	cgylsiB110
Cucsa.097160	Silver-seed gourd	carcgyB0130
Cucsa.097160	Silver-seed gourd	carcgyB0927
Cucsa.097160	Cucumber (Chinese Long) v3	cgycucB108
Cucsa.097160	Cucumber (Gy14) v1	cgycgyB035
Cucsa.097160	Cucurbita maxima (Rimu)	cgycmaB0198
Cucsa.097160	Cucurbita maxima (Rimu)	cgycmaB0206
Cucsa.097160	Cucurbita moschata (Rifu)	cgycmoB0191
Cucsa.097160	Cucurbita moschata (Rifu)	cgycmoB0200
Cucsa.097160	Wild cucumber (PI 183967)	cgycpiB106