CmaCh01G003150 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh01G003150
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhytochrome A-associated F-box protein
LocationCma_Chr01 : 1518797 .. 1519780 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAATCCCTCTTCTCCACCCTCCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACAATCCCTGTTACTGGGCTCGTCTGGCTTGTGTTTCCACCAGATTCTCCTCTACAATCCGTAATATCTGCTGGAAGAACAAGTGTAACCAAGCCATCCCTTCTATTGTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCCCCGGCGGCTGGGCCTCGCTTCTTAAGCTCGCCATCTGTTGTCCAGGCCTGCACCATTCCGGCGTTCTTCTCGAGAATTCCGATTTCGGGCTCGAGCGGGAACTCGGTCCGGATGAAAAGTATCTGGTATTGAGCTCGACTCATGACTCCAAACACGAATCGGAGTCCTCCACTGCTCAAATTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGATTGTGCTTGGTCGCTTTACGATGATCTGTATCTTGATACTGTATATAACGATTCTGAATCCCCGGATGTTCTCGACCCTCAAATCGGTGGTACGAAGGTCGAGAAGGGGGTTTTTGTGTCGGATGGGGAATTTTGTGCTTCGAAAAGGAGAAAGATCTATAGGTCTATGGGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAACAGGGAACAAGGAACTAAGCTGCTTAGGAGTCAATTTAGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAGCGGAATTACATGCTTTTTAGAGGCTTTTTCAAGAACTTCAAAGGTTCTCATGTATGGAGAACGATCAAAGATGGGAACAGGAACAAAATTGATCTGAAATGTGCGTTTTGCTCGTGCAATGAGACGTGGGATTTGCATTCTGGGTTCTGTTTGAGGCGGGGTTTTGGGTACCATGATGATGGGGAGCCAGTTGTTCGGGCTTATGTCTGTGAGAATGGGCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTATCCTTAA

mRNA sequence

ATGGCGGAATCCCTCTTCTCCACCCTCCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACAATCCCTGTTACTGGGCTCGTCTGGCTTGTGTTTCCACCAGATTCTCCTCTACAATCCGTAATATCTGCTGGAAGAACAAGTGTAACCAAGCCATCCCTTCTATTGTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCCCCGGCGGCTGGGCCTCGCTTCTTAAGCTCGCCATCTGTTGTCCAGGCCTGCACCATTCCGGCGTTCTTCTCGAGAATTCCGATTTCGGGCTCGAGCGGGAACTCGGTCCGGATGAAAAGTATCTGGTATTGAGCTCGACTCATGACTCCAAACACGAATCGGAGTCCTCCACTGCTCAAATTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGATTGTGCTTGGTCGCTTTACGATGATCTGTATCTTGATACTGTATATAACGATTCTGAATCCCCGGATGTTCTCGACCCTCAAATCGGTGGTACGAAGGTCGAGAAGGGGGTTTTTGTGTCGGATGGGGAATTTTGTGCTTCGAAAAGGAGAAAGATCTATAGGTCTATGGGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAACAGGGAACAAGGAACTAAGCTGCTTAGGAGTCAATTTAGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAGCGGAATTACATGCTTTTTAGAGGCTTTTTCAAGAACTTCAAAGGTTCTCATGTATGGAGAACGATCAAAGATGGGAACAGGAACAAAATTGATCTGAAATGTGCGTTTTGCTCGTGCAATGAGACGTGGGATTTGCATTCTGGGTTCTGTTTGAGGCGGGGTTTTGGGTACCATGATGATGGGGAGCCAGTTGTTCGGGCTTATGTCTGTGAGAATGGGCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTATCCTTAA

Coding sequence (CDS)

ATGGCGGAATCCCTCTTCTCCACCCTCCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACAATCCCTGTTACTGGGCTCGTCTGGCTTGTGTTTCCACCAGATTCTCCTCTACAATCCGTAATATCTGCTGGAAGAACAAGTGTAACCAAGCCATCCCTTCTATTGTCGCCGATCTTGTCGTCGGCGACTCTGTTCCCCCCGGCGGCTGGGCCTCGCTTCTTAAGCTCGCCATCTGTTGTCCAGGCCTGCACCATTCCGGCGTTCTTCTCGAGAATTCCGATTTCGGGCTCGAGCGGGAACTCGGTCCGGATGAAAAGTATCTGGTATTGAGCTCGACTCATGACTCCAAACACGAATCGGAGTCCTCCACTGCTCAAATTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGATTGTGCTTGGTCGCTTTACGATGATCTGTATCTTGATACTGTATATAACGATTCTGAATCCCCGGATGTTCTCGACCCTCAAATCGGTGGTACGAAGGTCGAGAAGGGGGTTTTTGTGTCGGATGGGGAATTTTGTGCTTCGAAAAGGAGAAAGATCTATAGGTCTATGGGGTCGCATTTGGCATCTGGGGTTTGGAATTTAAACAGGGAACAAGGAACTAAGCTGCTTAGGAGTCAATTTAGAGGCGATTGTTTGTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAGCGGAATTACATGCTTTTTAGAGGCTTTTTCAAGAACTTCAAAGGTTCTCATGTATGGAGAACGATCAAAGATGGGAACAGGAACAAAATTGATCTGAAATGTGCGTTTTGCTCGTGCAATGAGACGTGGGATTTGCATTCTGGGTTCTGTTTGAGGCGGGGTTTTGGGTACCATGATGATGGGGAGCCAGTTGTTCGGGCTTATGTCTGTGAGAATGGGCATGTCTCTGGAGCTTGGACGGATCTGCCATTGTATCCTTAA

Protein sequence

MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVADLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSKHESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYP
Homology
[Close]
BLAST of CmaCh01G003150 vs. Swiss-Prot
Match: EID1_ARATH (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana GN=EID1 PE=1 SV=2)

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-115
Identity = 204/343 (59.48%), Postives = 244/343 (71.14%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MAES+FS +P+D++ NIFFKL+D+P  WARLACV T+FSS +RN+C K +C  AIP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLV--------------VGDS--VPPGGWASLLKLAICCPGLHHSGVLLENSDFGLEREL 120
           DL+                DS   PPGGWASL KLA+CCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDEKYLVLSSTHDSKHESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPD 180
           GPD+      +T D     E  +    V S L  ++    WSLYDDLY DT+        
Sbjct: 121 GPDQNLDPKPTTTDLALNDEEVSKP--VGSGLETTSF---WSLYDDLYTDTIPAPPPEDS 180

Query: 181 VLDPQIGGTKVEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRG 240
           + D +    ++E        +    KRRKI RS+GSHLASG WNL+REQG KLL S+FRG
Sbjct: 181 IDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRFRG 240

Query: 241 DCLYICDWPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKID-LKCAFCSCNET 300
           DCLYIC+WPGC+H+EEKRNYMLFRG FK+FK S VWRTI DGNR+K   LKCAFC C+ET
Sbjct: 241 DCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCDET 300

Query: 301 WDLHSGFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           WDLHS FCLRR FG+HDDGEPVVRAYVCENGHVSGAWT LPLY
Sbjct: 301 WDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLY 335

[Close]
BLAST of CmaCh01G003150 vs. TrEMBL
Match: A0A0A0KWJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001740 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 8.1e-165
Identity = 279/333 (83.78%), Postives = 297/333 (89.19%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MA+SLFSTLPDDILLNIFFKLED+P  WARLACVST+FS TIRNICWK KC+ AIPS+V+
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120
           DL+VGDS+P GGWASL KLA+CCPGL HSGVLLENSDFGLERELGPDE Y+ L S+  S+
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 121 HESE-SSTAQIEVNSDLSASA------SDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGT 180
            ES  SSTA  EVNSDLSASA      SDCAWSLYDDLYLDT+YNDSE+PDVLDPQIG T
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 181 KVEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWP 240
           KVEKGVF++D EFC SKRRKI RSM SHLASGVWNL+REQG KLLRS+FRGD LYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 241 GCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLR 300
           GCVHIEEKRNYMLFRG FKNFKGSHVWRTIKDGNRNKIDL CAFCSC ETWDLHS FCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 301 RGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           R FGYHDDGEPVVRAYVCENGHVSGAWTDLPLY
Sbjct: 301 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 333

[Close]
BLAST of CmaCh01G003150 vs. TrEMBL
Match: M5VNE0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017065mg PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.2e-133
Identity = 224/322 (69.57%), Postives = 260/322 (80.75%), Query Frame = 1 

Query: 5   LFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVADLVV 64
           LFS L DD++L I FKLE++P  WARLAC  T+FSS IRN+C K KC++AIPS+V+DL+ 
Sbjct: 1   LFSQLSDDVVLKILFKLEEDPRNWARLACSCTKFSSLIRNVCCKTKCSKAIPSVVSDLLS 60

Query: 65  GDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSKHESE 124
           G S PPGGWA+L KLA+CCPGL HSGVL ENSDFGLERE+GPDE Y  L S+  +K ++E
Sbjct: 61  GSSAPPGGWAALHKLAVCCPGLLHSGVLFENSDFGLEREVGPDENYRRLDSSPAAKPQTE 120

Query: 125 SSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKGVFVSDG 184
            S++QI  N ++ AS  +C+WSL+DDLY DTVY+DSE+   ++       VEKG     G
Sbjct: 121 PSSSQIGANHEVGASGPNCSWSLFDDLYFDTVYDDSEAQ--VEAAQDQASVEKGGVRVGG 180

Query: 185 EFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCVHIEEKRNY 244
           EF   K+RK+ RSM SH ASGVWNL+REQG KLL S+FRGDCLYICDWP CVHIEEKRNY
Sbjct: 181 EFSRCKKRKVCRSMRSHSASGVWNLSREQGNKLLHSRFRGDCLYICDWPFCVHIEEKRNY 240

Query: 245 MLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGFGYHDDGEP 304
           MLFRG FK+FKGS VWRTI+DGNR+KIDL CAFCSC ETWDLHS FCLRR FGYHDDGEP
Sbjct: 241 MLFRGIFKDFKGSQVWRTIRDGNRSKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEP 300

Query: 305 VVRAYVCENGHVSGAWTDLPLY 327
           VVRAYVCENGHVSGAWTDLPLY
Sbjct: 301 VVRAYVCENGHVSGAWTDLPLY 320

[Close]
BLAST of CmaCh01G003150 vs. TrEMBL
Match: W9T2Y8_9ROSA (Phytochrome A-associated F-box protein OS=Morus notabilis GN=L484_001253 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 2.9e-130
Identity = 226/327 (69.11%), Postives = 259/327 (79.20%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           M  S+F+ L DD++LNIF KL+D+P  WARLACV T+FSS IRN+CWKNKC  AIPS ++
Sbjct: 1   MEASMFTKLSDDVVLNIFAKLDDDPRNWARLACVCTKFSSLIRNVCWKNKCLAAIPSTIS 60

Query: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120
           DL+   S PPGGWASL KLA+CCPGL HSGVLLENSDFGLERE+GPD+ Y  L+    S+
Sbjct: 61  DLLSSASDPPGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREIGPDDNYRQLAP---SQ 120

Query: 121 HESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKV-EKGV 180
             ++ S++Q   +S+  A  SDC+WSL+DDLY DTVY+ SE  D    QI    V EKGV
Sbjct: 121 TLTDPSSSQFSADSEGIAPNSDCSWSLFDDLYYDTVYHASEGQD--SAQIAEEVVIEKGV 180

Query: 181 FVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCVHIE 240
           F S+   CA KRR+I R M SHLASGVWNL+REQG KLL S+FRGD LYICDWPGCVHIE
Sbjct: 181 FKSENRECA-KRRRICRPMRSHLASGVWNLSREQGNKLLHSRFRGDSLYICDWPGCVHIE 240

Query: 241 EKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGFGYH 300
           EKRNYMLFRG FK+FK S VWRT+KDGNR  IDL CAFC C +TWDLHS FCLRRGFG+H
Sbjct: 241 EKRNYMLFRGVFKDFKASQVWRTVKDGNRTAIDLNCAFCGCKDTWDLHSAFCLRRGFGFH 300

Query: 301 DDGEPVVRAYVCENGHVSGAWTDLPLY 327
           DDGEPVVRAYVCENGHVSGAWTDLPLY
Sbjct: 301 DDGEPVVRAYVCENGHVSGAWTDLPLY 321

[Close]
BLAST of CmaCh01G003150 vs. TrEMBL
Match: F6HZ43_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00340 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 3.2e-129
Identity = 225/330 (68.18%), Postives = 259/330 (78.48%), Query Frame = 1 

Query: 3   ESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVADL 62
           E++FS L DD++L+I FKLED+P YWARLACV T+FSS IRN+CWK KC+Q IPSIVADL
Sbjct: 58  ETVFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSIVADL 117

Query: 63  VVG--DSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTH--- 122
             G  DS PPGGWA+L KL++CCPGL HSGVLLENSDFGLERELGPDE Y    S     
Sbjct: 118 FSGPGDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKAGSFQITV 177

Query: 123 -DSKHESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVE 182
            D+   + +S++  + NS++S S   C+WSL+DDLY DT+YN SE+ D  + QIG  +VE
Sbjct: 178 GDATTPAVASSSHHDGNSEVSDS---CSWSLFDDLYFDTLYNVSETMD--ETQIG-VEVE 237

Query: 183 KGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCV 242
            G     G+   SK  K  R + SHLASGVWNL+REQG KLL S+FRGDCLYICDWPGCV
Sbjct: 238 NGAVKVGGDLPVSKTVKSCRPLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 297

Query: 243 HIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGF 302
           H+EEKRNYMLFRG FKNFK S VWRTI DGNR+K+DL CAFC C ETWDLHS FCLRRGF
Sbjct: 298 HVEEKRNYMLFRGVFKNFKRSRVWRTINDGNRSKVDLNCAFCPCKETWDLHSAFCLRRGF 357

Query: 303 GYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           GYHDDGEPVVRAYVCENGHVSGAWT+ PLY
Sbjct: 358 GYHDDGEPVVRAYVCENGHVSGAWTEYPLY 381

[Close]
BLAST of CmaCh01G003150 vs. TrEMBL
Match: A5BLJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000965 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.2e-128
Identity = 224/330 (67.88%), Postives = 258/330 (78.18%), Query Frame = 1 

Query: 3   ESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVADL 62
           E++FS L DD++L+I FKLED+P YWARLACV T+FSS IRN+CWK KC+Q  PSIVADL
Sbjct: 396 ETVFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTXPSIVADL 455

Query: 63  VVG--DSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTH--- 122
             G  DS PPGGWA+L KL++CCPGL HSGVLLENSDFGLERELGPDE Y    S     
Sbjct: 456 FSGPGDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKAGSFQITV 515

Query: 123 -DSKHESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVE 182
            D+   + +S++  + NS++S S   C+WSL+DDLY DT+YN SE+ D  + QIG  +VE
Sbjct: 516 GDATTPAVASSSHHDGNSEVSDS---CSWSLFDDLYFDTLYNVSETMD--ETQIG-VEVE 575

Query: 183 KGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCV 242
            G     G+   SK  K  R + SHLASGVWNL+REQG KLL S+FRGDCLYICDWPGCV
Sbjct: 576 NGAVKVGGDLPVSKTVKSCRPLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 635

Query: 243 HIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGF 302
           H+EEKRNYMLFRG FKNFK S VWRTI DGNR+K+DL CAFC C ETWDLHS FCLRRGF
Sbjct: 636 HVEEKRNYMLFRGVFKNFKRSRVWRTINDGNRSKVDLNCAFCPCKETWDLHSAFCLRRGF 695

Query: 303 GYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           GYHDDGEPVVRAYVCENGHVSGAWT+ PLY
Sbjct: 696 GYHDDGEPVVRAYVCENGHVSGAWTEYPLY 719

[Close]
BLAST of CmaCh01G003150 vs. TAIR10
Match: AT4G02440.1 (AT4G02440.1 F-box family protein)

HSP 1 Score: 417.5 bits (1072), Expect = 7.4e-117
Identity = 204/343 (59.48%), Postives = 244/343 (71.14%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MAES+FS +P+D++ NIFFKL+D+P  WARLACV T+FSS +RN+C K +C  AIP++++
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 61  DLV--------------VGDS--VPPGGWASLLKLAICCPGLHHSGVLLENSDFGLEREL 120
           DL+                DS   PPGGWASL KLA+CCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 121 GPDEKYLVLSSTHDSKHESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPD 180
           GPD+      +T D     E  +    V S L  ++    WSLYDDLY DT+        
Sbjct: 121 GPDQNLDPKPTTTDLALNDEEVSKP--VGSGLETTSF---WSLYDDLYTDTIPAPPPEDS 180

Query: 181 VLDPQIGGTKVEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRG 240
           + D +    ++E        +    KRRKI RS+GSHLASG WNL+REQG KLL S+FRG
Sbjct: 181 IDDQE---EEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQGNKLLASRFRG 240

Query: 241 DCLYICDWPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKID-LKCAFCSCNET 300
           DCLYIC+WPGC+H+EEKRNYMLFRG FK+FK S VWRTI DGNR+K   LKCAFC C+ET
Sbjct: 241 DCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCDET 300

Query: 301 WDLHSGFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           WDLHS FCLRR FG+HDDGEPVVRAYVCENGHVSGAWT LPLY
Sbjct: 301 WDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLY 335

[Close]
BLAST of CmaCh01G003150 vs. TAIR10
Match: AT5G15440.1 (AT5G15440.1 EID1-like 1)

HSP 1 Score: 52.4 bits (124), Expect = 6.2e-07
Identity = 41/129 (31.78%), Postives = 57/129 (44.19%), Query Frame = 1 

Query: 210 NREQGTKLLRSQFRGDCLYICDWPGCVHIE--EKRNYMLFRGFFKNFKGSHVWRTIKDGN 269
           +R  G  LL  Q R D LY+CD   C H++  E+ +  LFRG FK+F  S V + I    
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVI---- 182

Query: 270 RNKI-----DLKCAFCSCNETWD------LHSGFCLRRGFGYHDDGEPVVRAYVCENGHV 326
            NK         C +C   + W       +    C+R      +  E  +  +VC NGH+
Sbjct: 183 INKAVPFHPSEVCPYCKA-KLWSMLQAKIIPQSACIRL-----EAYEDCIEYFVCLNGHL 239

[Close]
BLAST of CmaCh01G003150 vs. NCBI nr
Match: gi|778689292|ref|XP_011652932.1| (PREDICTED: phytochrome A-associated F-box protein [Cucumis sativus])

HSP 1 Score: 587.8 bits (1514), Expect = 1.2e-164
Identity = 279/333 (83.78%), Postives = 297/333 (89.19%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MA+SLFSTLPDDILLNIFFKLED+P  WARLACVST+FS TIRNICWK KC+ AIPS+V+
Sbjct: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105

Query: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120
           DL+VGDS+P GGWASL KLA+CCPGL HSGVLLENSDFGLERELGPDE Y+ L S+  S+
Sbjct: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165

Query: 121 HESE-SSTAQIEVNSDLSASA------SDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGT 180
            ES  SSTA  EVNSDLSASA      SDCAWSLYDDLYLDT+YNDSE+PDVLDPQIG T
Sbjct: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225

Query: 181 KVEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWP 240
           KVEKGVF++D EFC SKRRKI RSM SHLASGVWNL+REQG KLLRS+FRGD LYICDWP
Sbjct: 226 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 285

Query: 241 GCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLR 300
           GCVHIEEKRNYMLFRG FKNFKGSHVWRTIKDGNRNKIDL CAFCSC ETWDLHS FCLR
Sbjct: 286 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 345

Query: 301 RGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           R FGYHDDGEPVVRAYVCENGHVSGAWTDLPLY
Sbjct: 346 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 378

[Close]
BLAST of CmaCh01G003150 vs. NCBI nr
Match: gi|700197649|gb|KGN52807.1| (hypothetical protein Csa_4G001740 [Cucumis sativus])

HSP 1 Score: 587.8 bits (1514), Expect = 1.2e-164
Identity = 279/333 (83.78%), Postives = 297/333 (89.19%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MA+SLFSTLPDDILLNIFFKLED+P  WARLACVST+FS TIRNICWK KC+ AIPS+V+
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120
           DL+VGDS+P GGWASL KLA+CCPGL HSGVLLENSDFGLERELGPDE Y+ L S+  S+
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 121 HESE-SSTAQIEVNSDLSASA------SDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGT 180
            ES  SSTA  EVNSDLSASA      SDCAWSLYDDLYLDT+YNDSE+PDVLDPQIG T
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 181 KVEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWP 240
           KVEKGVF++D EFC SKRRKI RSM SHLASGVWNL+REQG KLLRS+FRGD LYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 241 GCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLR 300
           GCVHIEEKRNYMLFRG FKNFKGSHVWRTIKDGNRNKIDL CAFCSC ETWDLHS FCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 301 RGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           R FGYHDDGEPVVRAYVCENGHVSGAWTDLPLY
Sbjct: 301 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 333

[Close]
BLAST of CmaCh01G003150 vs. NCBI nr
Match: gi|659108707|ref|XP_008454346.1| (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo])

HSP 1 Score: 587.8 bits (1514), Expect = 1.2e-164
Identity = 278/332 (83.73%), Postives = 298/332 (89.76%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MA+SLFSTLP+DILLNIFFKLED+P  WARLACVST+FSSTIRNICWK KC+ AIPS+V+
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120
           DL+VGDS+P GGWASL KLA+CCPGL HSGVLLENSDFGLERELGPDE Y+ L  +  S+
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 121 HESE--SSTAQIEVNSDLSASA----SDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTK 180
            ES+  SSTA  EVNSDLSASA    SDCAWSLYDDLYLDT+YNDSE+PDVLDPQIG TK
Sbjct: 121 PESDPPSSTALFEVNSDLSASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTK 180

Query: 181 VEKGVFVSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPG 240
           VEKGVF++D EFC SKRRKI RSM SHLASGVWNL+REQG KLLRS+FRGD LYICDWPG
Sbjct: 181 VEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPG 240

Query: 241 CVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRR 300
           CVHIEEKRNYMLFRG FKNFKGSHVWRTIKDGNRNKIDL CAFCSC ETWDLHS FCLRR
Sbjct: 241 CVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRR 300

Query: 301 GFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
            FGYHDDGEPVVRAYVCENGHVSGAWTDLPLY
Sbjct: 301 VFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 332

[Close]
BLAST of CmaCh01G003150 vs. NCBI nr
Match: gi|1009148328|ref|XP_015891879.1| (PREDICTED: phytochrome A-associated F-box protein [Ziziphus jujuba])

HSP 1 Score: 485.3 bits (1248), Expect = 8.2e-134
Identity = 236/335 (70.45%), Postives = 268/335 (80.00%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MAE++FS L DD++LNIFF LED+P  WARLACVST+FSS IRN+CWKNKC +AIPS+VA
Sbjct: 1   MAETVFSKLSDDVVLNIFFNLEDDPRNWARLACVSTKFSSLIRNVCWKNKCTKAIPSVVA 60

Query: 61  DLVVGDSV---PPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYL-VLSST 120
           DL+ G S    PPGGWA+L KLA+CCPG  H+GVLLENSDFGLERELGPDE +  +LSS+
Sbjct: 61  DLLSGSSSSSSPPGGWAALHKLAVCCPGFLHAGVLLENSDFGLERELGPDENFRKMLSSS 120

Query: 121 HDSKHESESSTAQIEVNS-DLS-ASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTK 180
             +K   E S+++ +VN  D+  AS  DC+WSLYDDLY DTVYN SE+ D  +       
Sbjct: 121 RPTKALKEPSSSRFDVNPPDVGGASGFDCSWSLYDDLYYDTVYNVSEAQDCNEIGEEVVV 180

Query: 181 VEKGVFVSDGEFCAS---KRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICD 240
           V+K V     E  +S   KRRKI RSM SHLASGVWNL+REQG KLL S+FRGDCLYICD
Sbjct: 181 VDKSVVEGGYEVSSSSCNKRRKICRSMRSHLASGVWNLSREQGNKLLHSRFRGDCLYICD 240

Query: 241 WPGCVHIEEKRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFC 300
           WPGCVHIEEKRNYMLFRG FKNFKGS VWRTIKDGNR+KIDL CAFC C +TWDLHS FC
Sbjct: 241 WPGCVHIEEKRNYMLFRGIFKNFKGSQVWRTIKDGNRSKIDLNCAFCPCKDTWDLHSAFC 300

Query: 301 LRRGFGYHDDGEPVVRAYVCENGHVSGAWTDLPLY 327
           LRR FG+HDDGEPVVRAYVCENGHVSGAWTD PLY
Sbjct: 301 LRRVFGFHDDGEPVVRAYVCENGHVSGAWTDWPLY 335

[Close]
BLAST of CmaCh01G003150 vs. NCBI nr
Match: gi|645259161|ref|XP_008235229.1| (PREDICTED: phytochrome A-associated F-box protein [Prunus mume])

HSP 1 Score: 484.6 bits (1246), Expect = 1.4e-133
Identity = 225/326 (69.02%), Postives = 260/326 (79.75%), Query Frame = 1 

Query: 1   MAESLFSTLPDDILLNIFFKLEDNPCYWARLACVSTRFSSTIRNICWKNKCNQAIPSIVA 60
           MA  LFS L DD++L I FKLE++P  WARLAC  T+FSS IRN+C K KC++ IPS+V+
Sbjct: 1   MAGPLFSQLSDDVVLKILFKLEEDPRNWARLACSCTKFSSLIRNVCCKTKCSEVIPSVVS 60

Query: 61  DLVVGDSVPPGGWASLLKLAICCPGLHHSGVLLENSDFGLERELGPDEKYLVLSSTHDSK 120
           DL+ G S PPGGWA+L KLA+CCPGL HSGVL ENSDFGLERE+GPDE Y  L S   +K
Sbjct: 61  DLLSGSSAPPGGWAALHKLAVCCPGLLHSGVLFENSDFGLEREVGPDENYRRLDSPPAAK 120

Query: 121 HESESSTAQIEVNSDLSASASDCAWSLYDDLYLDTVYNDSESPDVLDPQIGGTKVEKGVF 180
            ++E S++QI  N ++ AS  +C+WSL+DDLY DTVY+DSE+   ++       VEKG  
Sbjct: 121 PQTEPSSSQIGANHEVGASGPNCSWSLFDDLYFDTVYDDSEAQ--VEAAEDQASVEKGGV 180

Query: 181 VSDGEFCASKRRKIYRSMGSHLASGVWNLNREQGTKLLRSQFRGDCLYICDWPGCVHIEE 240
              GEF   K+RK+ R M SHLASGVWNL+REQG KLL S+FRGDCLYICDWP CVHIEE
Sbjct: 181 RVGGEFSICKKRKVCRPMRSHLASGVWNLSREQGNKLLHSRFRGDCLYICDWPFCVHIEE 240

Query: 241 KRNYMLFRGFFKNFKGSHVWRTIKDGNRNKIDLKCAFCSCNETWDLHSGFCLRRGFGYHD 300
           KRNYMLFRG FK+FKGS VWRTI+DGNR+KIDL CAFCSC ETWDLHS FCLRR FGYHD
Sbjct: 241 KRNYMLFRGIFKDFKGSQVWRTIRDGNRSKIDLNCAFCSCKETWDLHSAFCLRRVFGYHD 300

Query: 301 DGEPVVRAYVCENGHVSGAWTDLPLY 327
           DGEPVVRAYVCENGHVSGAWTDLPLY
Sbjct: 301 DGEPVVRAYVCENGHVSGAWTDLPLY 324

The following BLAST results are available for this feature:
BLAST of CmaCh01G003150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EID1_ARATH1.3e-11559.48Phytochrome A-associated F-box protein OS=Arabidopsis thaliana GN=EID1 PE=1 SV=2[more]
BLAST of CmaCh01G003150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWJ3_CUCSA8.1e-16583.78Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001740 PE=4 SV=1[more]
M5VNE0_PRUPE2.2e-13369.57Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017065mg PE=4 S... [more]
W9T2Y8_9ROSA2.9e-13069.11Phytochrome A-associated F-box protein OS=Morus notabilis GN=L484_001253 PE=4 SV... [more]
F6HZ43_VITVI3.2e-12968.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00340 PE=4 SV=... [more]
A5BLJ1_VITVI1.2e-12867.88Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000965 PE=4 SV=1[more]
BLAST of CmaCh01G003150 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02440.17.4e-11759.48 F-box family protein[more]
AT5G15440.16.2e-0731.78 EID1-like 1[more]
BLAST of CmaCh01G003150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778689292|ref|XP_011652932.1|1.2e-16483.78PREDICTED: phytochrome A-associated F-box protein [Cucumis sativus][more]
gi|700197649|gb|KGN52807.1|1.2e-16483.78hypothetical protein Csa_4G001740 [Cucumis sativus][more]
gi|659108707|ref|XP_008454346.1|1.2e-16483.73PREDICTED: phytochrome A-associated F-box protein [Cucumis melo][more]
gi|1009148328|ref|XP_015891879.1|8.2e-13470.45PREDICTED: phytochrome A-associated F-box protein [Ziziphus jujuba][more]
gi|645259161|ref|XP_008235229.1|1.4e-13369.02PREDICTED: phytochrome A-associated F-box protein [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0048366 leaf development
biological_process GO:0008150 biological_process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0032880 regulation of protein localization
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010099 regulation of photomorphogenesis
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0048573 photoperiodism, flowering
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0005515 protein binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G003150.1CmaCh01G003150.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 5..46
score: 1.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 3..60
score: 2.4
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 5..53
score: 9.
NoneNo IPR availablePANTHERPTHR31348FAMILY NOT NAMEDcoord: 196..326
score: 3.2E-157coord: 1..96
score: 3.2E
NoneNo IPR availablePANTHERPTHR31348:SF4PHYTOCHROME A-ASSOCIATED F-BOX PROTEINcoord: 196..326
score: 3.2E-157coord: 1..96
score: 3.2E