Cucsa.094070 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.094070
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00919 : 290220 .. 290599 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGAGCCTTCTACGCCTTCCATAGTTTCTTCTAGAGGAGAAGGCCATAAGAAATGATAAGGAGTGAATTGGATCAACTTAAGGAATTCAGCCGATCCTCCTTTATCGTCTTCTTCCAAGTCGTAGTCCTCGTGTGGGACGCACATGCCGTTGCTTGTCATTGTCTTGCTCCATACGATCTAGCTAGCAATTACAAGGGGGCTTCCCATGGCAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAAAAACCCTTTAGATATGGAAGTTTTGAGCCTATTCTTTTGGTTTTCTCAAGCAACTGTCTAGCTGTATGAATTCTATATCCTGTCTTCTGGGGTCTATTGAACCTGCTAAGGTAATTTTTAACCCCAT

mRNA sequence

TAGGAGCCTTCTACGCCTTCCATAGTTTCTTCTAGAGGAGAAGGCCATAAGAAATGATAAGGAGTGAATTGGATCAACTTAAGGAATTCAGCCGATCCTCCTTTATCGTCTTCTTCCAAGTCGTAGTCCTCGTGTGGGACGCACATGCCGTTGCTTGTCATTGTCTTGCTCCATACGATCTAGCTAGCAATTACAAGGGGGCTTCCCATGGCAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAAAAACCCTTTAGATATGGAAGTTTTGAGCCTATTCTTTTGGTTTTCTCAAGCAACTGTCTAGCTGTATGAATTCTATATCCTGTCTTCTGGGGTCTATTGAACCTGCTAAGGTAATTTTTAACCCCAT

Coding sequence (CDS)

ATGATAAGGAGTGAATTGGATCAACTTAAGGAATTCAGCCGATCCTCCTTTATCGTCTTCTTCCAAGTCGTAGTCCTCGTGTGGGACGCACATGCCGTTGCTTGTCATTGTCTTGCTCCATACGATCTAGCTAGCAATTACAAGGGGGCTTCCCATGGCAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAAAAACCCTTTAGATATGGAAGTTTTGAGCCTATTCTTTTGGTTTTCTCAAGCAACTGTCTAG

Protein sequence

MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIKSLCLEVKNPLDMEVLSLFFWFSQATV*
Homology
[Close]
BLAST of Cucsa.094070 vs. TrEMBL
Match: A0A0A0KU56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023050 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.7e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60
          MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK
Sbjct: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60

Query: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 87
          SLCLEVKNPLDMEVLSLFFWFSQATV
Sbjct: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 86

[Close]
BLAST of Cucsa.094070 vs. NCBI nr
Match: gi|700198012|gb|KGN53170.1| (hypothetical protein Csa_4G023050 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 9.7e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1 

Query: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60
          MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK
Sbjct: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60

Query: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 87
          SLCLEVKNPLDMEVLSLFFWFSQATV
Sbjct: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 86

The following BLAST results are available for this feature:
BLAST of Cucsa.094070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU56_CUCSA6.7e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023050 PE=4 SV=1[more]
BLAST of Cucsa.094070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198012|gb|KGN53170.1|9.7e-42100.00hypothetical protein Csa_4G023050 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.094070.1Cucsa.094070.1mRNA