Csa4G023050 (gene) Cucumber (Chinese Long) v2

NameCsa4G023050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 2614623 .. 2615100 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGGAGTGAATTGGATCAACTTAAGGAATTCAGCCGATCCTCCTTTATCGTCTTCTTCCAAGTCGTAGTCCTCGTGTGGGACGCACATGCTGTTGCTTGTCATTGTCTTGCTCCATACGATCTAGCTAGCAATTACAAGGGGGCTTCCCATGGCAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAAAAACCCTTTAGATATGGAAGTTTTGAGCCTATTCTTTTGGTTTTCTCAAGCAACTGTCTAGCTGTATGTATTCTATATCCTGTCTTCTGGGGTCTATTGAACCTGCTAAGGTAACTTTTAACCCCATGTACTGGCTCTTTTTGGTCTCAAACACATCGTAAGCATTTGTTAACTGTGGTGTTATATTGTGTTTATCCAATTCCTTTGGCAATGAATGTTTATTTATGTGTTTTAAGAGTGAGGCATTTGTAGACTTTTAGTATTTTCTTTGTTTAAAA

mRNA sequence

ATGATAAGGAGTGAATTGGATCAACTTAAGGAATTCAGCCGATCCTCCTTTATCGTCTTCTTCCAAGTCGTAGTCCTCGTGTGGGACGCACATGCTGTTGCTTGTCATTGTCTTGCTCCATACGATCTAGCTAGCAATTACAAGGGGGCTTCCCATGGCAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAAAAACCCTTTAGATATGGAAGTTTTGAGCCTATTCTTTTGGTTTTCTCAAGCAACTGTCTAG

Coding sequence (CDS)

ATGATAAGGAGTGAATTGGATCAACTTAAGGAATTCAGCCGATCCTCCTTTATCGTCTTCTTCCAAGTCGTAGTCCTCGTGTGGGACGCACATGCTGTTGCTTGTCATTGTCTTGCTCCATACGATCTAGCTAGCAATTACAAGGGGGCTTCCCATGGCAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCAAAAACCCTTTAGATATGGAAGTTTTGAGCCTATTCTTTTGGTTTTCTCAAGCAACTGTCTAG

Protein sequence

MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIKSLCLEVKNPLDMEVLSLFFWFSQATV*
BLAST of Csa4G023050 vs. TrEMBL
Match: A0A0A0KU56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023050 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 6.7e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60
          MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK
Sbjct: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60

Query: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 87
          SLCLEVKNPLDMEVLSLFFWFSQATV
Sbjct: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 86

BLAST of Csa4G023050 vs. NCBI nr
Match: gi|700198012|gb|KGN53170.1| (hypothetical protein Csa_4G023050 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 9.7e-42
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 1

Query: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60
          MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK
Sbjct: 1  MIRSELDQLKEFSRSSFIVFFQVVVLVWDAHAVACHCLAPYDLASNYKGASHGNNLTKIK 60

Query: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 87
          SLCLEVKNPLDMEVLSLFFWFSQATV
Sbjct: 61 SLCLEVKNPLDMEVLSLFFWFSQATV 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KU56_CUCSA6.7e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G023050 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700198012|gb|KGN53170.1|9.7e-42100.00hypothetical protein Csa_4G023050 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU139505cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G023050.1Csa4G023050.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU139505CU139505transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G023050Cucsa.094070Cucumber (Gy14) v1cgycuB102
The following gene(s) are paralogous to this gene:

None