Cucsa.084450 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.084450
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Pre-mRNA-splicing factor 18
Location	scaffold00862 : 173889 .. 177641 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTTATTTTTCCTTCCCCTTTCTCATCCAATTCAGAGCACCGGCACTAAGCCCTAACAGGATTCCGGCGACCGAGAATCCCAACGGAATCAATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAGCTTCAGCCTCTACCACTTCCTCCTCCGTCGCAACCAACTCTACCACCACCACTTCAAAGTCCCTAACCGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACGGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAAGCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTTAAGCAATGTGCTCGTTATTTACATCCTCTCTTCAAGTTTTGCAGGAAGAAGGTACAATTTTTGTCCCTTTAGTTACGTAGTCGATTTGTTGAACGTTCAATTCTCTTGATGATTCTTCATCTTGACATACTTAGACTTCATGGTAGGTTCGAGAATAACCAGATTGTCTTTTTCTATGCAAGTTAGAGATGTTTAGAAATAGCCCTTCCAAGTGGCTAAGAGAGTACTAAATGGAAGAGTTAAAAGTAGCTTAGAATTTACACCAATCTAAAGCCACAAGAATAAGAGAAGCCAAAAGATTGCTTAAGGACTTGCTTTTGTTGAATGTTATTATTCATCTCTAGCCATAGTAGTCAAAAGTGAGTTCTAGCAAATTCTGTATCCAAATTCCATATAACTCTCTCATTTTGAAACGATGACTATCAATCATCCAAGGGAGTAGGCTGTTAATGTTAAAGGGGAGAACCACTTGGGACTAGAAGTTCATTTGCATGTAATTCGGCAGTTCCTCAGCCAACTGGCACATGAAGAAGAGATGGCTTTTGGATTCGCATCTTCCACTACTTGGGTCTTGAGTAGTGGCATCAATTTGGAAGTCTTTTTTGTTCTTTTTTTGTTTTTGTTTTGTTAGTCTTGGTGCTCTCATGAGAGAGCTCCTACAAGTAAACCTCAGCTTCCTTTGCATATATTTTGAGTGGCATATCATCTTATCTTTGGAATTATTTGTCTACCATATCCTTGAATAGGAAGTTGGAAGTAGAAAAAAAATGTATTTTTCAGACAGCCGAATTCACATATTGGAAAAGCACAAGTAAAAGTTGGAGAGCAAGTATAGGAAAGAGACCCATTCTTTATTTTCAGATCCAAAAAAAAAAAAAACCCTCAATTCAGGGTCCTAGCTTCAAGTAGAGAGGTTTTAAATGTGTCTTGGATAGAATCAGTTTACCAATTGTAGATAGAGGATCTCCTTGGGAAAGCATTTGAAAATGAAGCTTGTAGGACCAATTCAAATCGACATTTTGCTCCTATTGGAGTTCAAATCTTTTTAATCAATAATAGGTAAACGATACAACAATCGCCAATAGAACATAACTCAAGTGGCTATCAACCTCGACCTCTGAAGTTCAATCCCATCCCCCCACCCCACATATTGTAAAAAAAAAGAAGTAACCATTTGGCAATTACCTTTGGAAGTGTGGTAAGAAAATAGATACCGATAATAAACCATTACTTCATTTGTCAAGTCAGATTTCTTATGATTACAATCTTGGACTATGGCTACCCATTTACTTTACGTAGTTGGTTGCTGGCTGTTTTGTTATTACCAGGGCTGCCGGCTGAATGCTTAACTTATGGCCCGATAGCCTCTTTAGTTAGACCCTTGGCTCTGGCCACCTGTGTGAAAGCAACTGCCCCCTTCTTACTGCCACCCTATGAATCATATATTACAAGTTTACAACTATCTAACCCCATTGGTGTTAGTGGACCGTCCTTGTTAATTTCAATTGCACTATTTGACTTCTCAAGCTCCCCTTCCCCTCTCCTGGGATGGCTGTGGAATGTACATTACATTTTTTGTTTTCATATAATTGAATAAAGTGCTGTTTTTTGTATTTTACCACATGCAAGTGTCATTCTCGAACTTCCTTCTTTAAATCTACTATTATATACTTGTTCATTCCTCTTGGTTTTATTTTTTACTTGTTCATTGCAAACCGCTACATCAGTTGACAAATGTTCTGTATGCGACAAACATTTACTTAAGTAGAAGTTATTTGTAAAATTATTTATCTGAGGCTAGGTTCTTCGGGATAAAAATTCTGGCATGCATCATGTTTGTATGGAATGAATTATTGCATTGTGGTGTTCTTAAGATTCAATTATCTTTTATGTTTACTGCTCTCTCTGTGGCTTGCAGCCTTGCAATGTACTTAGATATAAATGCATAACTTGACATTTGTGAATGCTGAGAAACAAGAGAACCATAATGCAAGTTTGCTGAAATCAATTGATTATCTTCCAAGATTTTCTTTTTTAGCAGATAATTTTCATTAACGTATTATTATAATTTTCTTTTAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACGTTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAGAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAGGAAGTTAGAGTATCCTCGCTTCTCTTCTTTACTGTCTTCATATATGTAATCCATAATGTTCTTCAGCATAGTTTGGTAATCATTGAGTTGATTCCGGATTACTGTTTGAGATTGAAGTCTGTTGACGTCAAACACTTTCTAGCGATGTTTTGTCTACAGCTTTGCAAACGGTAGTAATGATGCAGTCCATGCTATCTGAGGAGATTTTGGGGGGAATCAATCAGGGTGTATGGACGAAGTGCTTTGAATCATGCCCGTCCCTGAAGACCTGGTAAGAAGATCCTCTCGTCGCTGCCATTTGTTGTGTCTGTATGATAAGTAATTTGAATCTAGGTTGGTAGTCAGTAAGTCAATGTCCAAGTACTGATCG

mRNA sequence

AGCTTATTTTTCCTTCCCCTTTCTCATCCAATTCAGAGCACCGGCACTAAGCCCTAACAGGATTCCGGCGACCGAGAATCCCAACGGAATCAATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAGCTTCAGCCTCTACCACTTCCTCCTCCGTCGCAACCAACTCTACCACCACCACTTCAAAGTCCCTAACCGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACGGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAAGCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTTAAGCAATGTGCTCGTTATTTACATCCTCTCTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACGTTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAGAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAGGAAGTTAGAGTATCCTCGCTTCTCTTCTTTACTGTCTTCATATATGTAATCCATAATGTTCTTCAGCATAGTTTGGTAATCATTGAGTTGATTCCGGATTACTGTTTGAGATTGAAGTCTGTTGACGTCAAACACTTTCTAGCGATGTTTTGTCTACAGCTTTGCAAACGGTAGTAATGATGCAGTCCATGCTATCTGAGGAGATTTTGGGGGGAATCAATCAGGGTGTATGGACGAAGTGCTTTGAATCATGCCCGTCCCTGAAGACCTGGTAAGAAGATCCTCTCGTCGCTGCCATTTGTTGTGTCTGTATGATAAGTAATTTGAATCTAGGTTGGTAGTCAGTAAGTCAATGTCCAAGTACTGATCG

Coding sequence (CDS)

ATGGATCTTCTCAAGCAAGAGCTTCTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGCGTTTTCAAGCGATCCGAAATCGAACAGAGGCAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAGCTAAAGCTCTCCGCCAATCCACCACATCCGCTACCGCCGCGGAGGCCGTCTCCACATCTTCTAAATCCAATCCATTAGCTTCAGCCTCTACCACTTCCTCCTCCGTCGCAACCAACTCTACCACCACCACTTCAAAGTCCCTAACCGACGAGCAGAATATCGACAACCTCGTCCTTCCCAGACAGGAAGTGATTCGAAGACTCCGGTTTCTGAAACAACCCATTACGCTTTTCGGGGAAGATGATGATGCTCGGCTTGACCGTTTGAAGTTCGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACGGAGGGGCAAACGAATGACTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGCGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTTGAAACTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTAAACGAGTGGAAGCAGGAATTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCTATGGTAGCAACATTTAAGCAATGTGCTCGTTATTTACATCCTCTCTTCAAGTTTTGCAGGAAGAAGGTTCTTCCCGATGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCCATAGGAAATGCCCCATGGCCTATTGGTGTCACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTGATGACGTTCTGTCAACGGCGCTATCCAACGATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAATCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGCAAGCTGGGTTCTGATGAGAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAG

Protein sequence

MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS*

Homology

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BLAST of Cucsa.084450 vs. Swiss-Prot
Match: PRP18_MOUSE (Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prpf18 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-53
Identity = 133/387 (34.37%), Postives = 205/387 (52.97%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATET---GGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELARKEEEAYYERCGYKIQPKEDDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Cucsa.084450 vs. Swiss-Prot
Match: PRP18_HUMAN (Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRPF18 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-53
Identity = 133/387 (34.37%), Postives = 205/387 (52.97%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATET---GGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Cucsa.084450 vs. Swiss-Prot
Match: PRP18_PONAB (Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-53
Identity = 133/387 (34.37%), Postives = 204/387 (52.71%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATET---GGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+    ++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYRIQPKEEDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Cucsa.084450 vs. Swiss-Prot
Match: PRP18_RAT (Pre-mRNA-splicing factor 18 OS=Rattus norvegicus GN=Prpf18 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.1e-53
Identity = 132/387 (34.11%), Postives = 205/387 (52.97%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATET---GGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKVQPKEDDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +P+ LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPMRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNSREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Cucsa.084450 vs. Swiss-Prot
Match: PRP18_BOVIN (Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.1e-53
Identity = 132/387 (34.11%), Postives = 205/387 (52.97%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATET---GGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +++ +   E+   +++ K   Q   +
Sbjct: 1   MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKDEDQKPLT 60

Query: 61  ATAAEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
           +           SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  S-----------SNPVLELELAEEKLP-------------------MTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    ++  
Sbjct: 121 RGEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNELV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ +E  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIK 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
             ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+
Sbjct: 301 FMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYI 342

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSL 385
           Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 QGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]

BLAST of Cucsa.084450 vs. TrEMBL
Match: A0A0A0K7C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388420 PE=4 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 1.6e-234
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Cucsa.084450 vs. TrEMBL
Match: A0A061DXM4_THECC (Splicing factor Prp18 family protein isoform 1 OS=Theobroma cacao GN=TCM_004356 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 6.7e-196
Identity = 359/422 (85.07%), Postives = 393/422 (93.13%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQ+LA ETGG+RVFKRSE+EQ+QIQ+LRE+EKRELEAK+ RQSTTS++ 
Sbjct: 1   MDLLKQELLKKRQSLAQETGGRRVFKRSEMEQKQIQKLREQEKRELEAKSRRQSTTSSST 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
             A  TS+KSNP  SAS+T+S+ AT ST  +SKSLTDEQNIDNL LPRQEVIRRLRFLKQ
Sbjct: 61  TNA--TSAKSNP--SASSTASTTAT-STAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDD ARLDRLK+VLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQKTG+LSERKR
Sbjct: 121 PITLFGEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGMLSERKR 180

Query: 181 QKKEDGAG-EEGDGGGADEE-SADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLL 240
           + +E+G G E+G+GGG +EE S DGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLL
Sbjct: 181 KDREEGGGGEDGEGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLL 240

Query: 241 NEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVEC 300
           NEW QELDEM EAEKRTAKGKSMVATFKQCARYL+PLFKFCRKKVLPDDI QALLVVVEC
Sbjct: 241 NEWNQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDICQALLVVVEC 300

Query: 301 CMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
           CMKRDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ
Sbjct: 301 CMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPE 420
           S+KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEE+VSGG    SD+RLR+MPAP+
Sbjct: 361 SVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKVSGGS--SSDDRLRLMPAPK 415

[Close]

BLAST of Cucsa.084450 vs. TrEMBL
Match: A0A067JN48_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21921 PE=4 SV=1)

HSP 1 Score: 681.4 bits (1757), Expect = 7.0e-193
Identity = 349/421 (82.90%), Postives = 385/421 (91.45%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQ+LA +TGGKRVFKRSEI+Q++IQ+LRE+EKRELEAKA RQ     TA
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKRELEAKAQRQ-----TA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           A A +T+S ++  AS++ T+++  + ST TTSKSLTDEQNIDNLVLP+QEVIRRLRFLKQ
Sbjct: 61  AAATNTTSTTSNSASSTATTTATTSTSTATTSKSLTDEQNIDNLVLPKQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDD ARLDRLK+VLKAG+FEVDSD+TEGQTNDFLRDIAELRKRQKTGI SERKR
Sbjct: 121 PITLFGEDDAARLDRLKYVLKAGIFEVDSDMTEGQTNDFLRDIAELRKRQKTGIPSERKR 180

Query: 181 QKKEDGAGEEGD-GGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLN 240
           + +E+G GE+G+ G G  E SADGGSSGV+ DKDLKRMKANF+ELC+EDKILVFFKRLLN
Sbjct: 181 KDREEGGGEDGEVGEGEGELSADGGSSGVDADKDLKRMKANFEELCDEDKILVFFKRLLN 240

Query: 241 EWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECC 300
           EWKQELDEM EAEKRTAKGKSMVATFKQCARYL PLFKFCRKKVLPDDIRQALLVVVECC
Sbjct: 241 EWKQELDEMSEAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVECC 300

Query: 301 MKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           MKRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPED 420
           +KRLMTFCQRRYPT+PSKAVEFNSLANGSDL SLLAEER SGG +  SD RLR+MPAPE+
Sbjct: 361 VKRLMTFCQRRYPTVPSKAVEFNSLANGSDLHSLLAEERSSGGNQ-ASDGRLRLMPAPEE 415

[Close]

BLAST of Cucsa.084450 vs. TrEMBL
Match: A0A061DPM4_THECC (Splicing factor Prp18 family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_004356 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 3.5e-192
Identity = 354/414 (85.51%), Postives = 385/414 (93.00%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQ+LA ETGG+RVFKRSE+EQ+QIQ+LRE+EKRELEAK+ RQSTTS++ 
Sbjct: 1   MDLLKQELLKKRQSLAQETGGRRVFKRSEMEQKQIQKLREQEKRELEAKSRRQSTTSSST 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
             A  TS+KSNP  SAS+T+S+ AT ST  +SKSLTDEQNIDNL LPRQEVIRRLRFLKQ
Sbjct: 61  TNA--TSAKSNP--SASSTASTTAT-STAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDD ARLDRLK+VLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQKTG+LSERKR
Sbjct: 121 PITLFGEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGMLSERKR 180

Query: 181 QKKEDGAG-EEGDGGGADEE-SADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLL 240
           + +E+G G E+G+GGG +EE S DGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLL
Sbjct: 181 KDREEGGGGEDGEGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLL 240

Query: 241 NEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVEC 300
           NEW QELDEM EAEKRTAKGKSMVATFKQCARYL+PLFKFCRKKVLPDDI QALLVVVEC
Sbjct: 241 NEWNQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDICQALLVVVEC 300

Query: 301 CMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
           CMKRDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ
Sbjct: 301 CMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLR 413
           S+KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEE+VSGG    SD+RLR
Sbjct: 361 SVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKVSGGS--SSDDRLR 407

[Close]

BLAST of Cucsa.084450 vs. TrEMBL
Match: A0A067FMY8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014920mg PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 4.5e-192
Identity = 341/421 (81.00%), Postives = 386/421 (91.69%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELL+KRQ LA ETGG+RVFKRSEIEQ+QIQ+LRE+EKRE EAK LRQ+ +  + 
Sbjct: 1   MDLLKQELLRKRQGLAEETGGRRVFKRSEIEQKQIQKLREQEKREQEAKLLRQNNSHNST 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           A    +S+ SN ++SA TT+++ A+ ++ T +K+LT+EQNIDNL LP+QEVIRRLR LKQ
Sbjct: 61  A----SSANSNSVSSARTTTATTASGASATATKTLTNEQNIDNLNLPKQEVIRRLRLLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARL+RLK+VLKAGLFEVDSD+TEGQTNDFLRDI ELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLERLKYVLKAGLFEVDSDMTEGQTNDFLRDIVELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEE-SADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLN 240
           + +E+G GE+G+GGG DEE SADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLN
Sbjct: 181 KDREEGGGEDGEGGGGDEELSADGGSSGVDMDKDLKRMKANFDELCEEDKILVFFKRLLN 240

Query: 241 EWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECC 300
           EW QEL+EMPEAEKRTAKGKSMVATFKQCARYL+PLFKFCRKKVLPDDIRQAL+++V CC
Sbjct: 241 EWNQELNEMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALMLMVNCC 300

Query: 301 MKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           MKRDYLAAMD YI++AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDHYIRLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPED 420
           +KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEE +SG  +  S+ERLR+MPAP++
Sbjct: 361 VKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEETISGSNQ-SSEERLRLMPAPKE 416

[Close]

BLAST of Cucsa.084450 vs. TAIR10
Match: AT1G03140.1 (AT1G03140.1 splicing factor Prp18 family protein)

HSP 1 Score: 577.8 bits (1488), Expect = 5.5e-165
Identity = 294/424 (69.34%), Postives = 356/424 (83.96%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLL++E+LKKR++LA E+GGK+ FKRSEIEQ++IQ+LRE+E+RE E KA R++  +A+ 
Sbjct: 1   MDLLREEILKKRKSLAEESGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASG 60

Query: 61  AEAVSTSSK--SNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
            +  S+ S   S+  A+++++ SS +  +    SK+LTDE    NL+LPRQEVIRRLRFL
Sbjct: 61  GDGKSSGSAPGSSNAATSASSKSSASDAAAIADSKALTDE----NLILPRQEVIRRLRFL 120

Query: 121 KQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
           KQP+TLFGEDD +RLDRLK+VLK GLFEVDSD+TEGQTNDFLRDIAEL+KRQK+G++ +R
Sbjct: 121 KQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFLRDIAELKKRQKSGMMGDR 180

Query: 181 KRQKKEDGAGEEGDGGGADEESADGG-SSGVETDKDLKRMKANFDELCEEDKILVFFKRL 240
           KR+ +++   +EGD G   E+   GG SS V+ DKD+KR+KANF++LC+EDKILVF+K+L
Sbjct: 181 KRKSRDERGRDEGDRGETREDELSGGESSDVDADKDMKRLKANFEDLCDEDKILVFYKKL 240

Query: 241 LNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVE 300
           L EWKQELD M   E+RTAKGK MVATFKQCARYL PLF  CRKK LP DIRQAL+V+V 
Sbjct: 241 LIEWKQELDAMENTERRTAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVN 300

Query: 301 CCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
            C+KRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL
Sbjct: 301 HCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGK-LGSDERLRIMPA 420
           QS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER  GG +   S+ERLR+MP+
Sbjct: 361 QSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPS 420

[Close]

BLAST of Cucsa.084450 vs. TAIR10
Match: AT1G54590.1 (AT1G54590.1 INVOLVED IN: RNA splicing)

HSP 1 Score: 339.0 bits (868), Expect = 4.3e-93
Identity = 183/290 (63.10%), Postives = 226/290 (77.93%), Query Frame = 1


Query: 132 RLDRLKFVLKAGLFE-VDSDLTEGQTNDFLRDIAELRKRQKT-GILSERKRQKKEDGAGE 191
           RLDRLK+VLK GLFE VD+D+T+G+TNDFLRDI EL+KR+++ G++++RKR+   D    
Sbjct: 86  RLDRLKYVLKEGLFEEVDNDMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSNDD--- 145

Query: 192 EGDGGGADEESADGGSSGVETDKDLKRM-KANFDELCEEDKILVFFKRLLNEWKQELDEM 251
             +  GA++E             DLK + +ANF++LC+EDKILVF K+LL EWKQEL+ M
Sbjct: 146 --ELIGAEKE-------------DLKLLEEANFEDLCDEDKILVFCKKLLLEWKQELEAM 205

Query: 252 PEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCMKRDYLAAM 311
              E+RTA GK M+ATF QCARYL PLF  CR K LP DIRQ L+V+V C +KRDYL A 
Sbjct: 206 ENTERRTAIGKQMLATFNQCARYLTPLFHLCRNKCLPADIRQGLMVMVNCWIKRDYLDAT 265

Query: 312 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFC 371
            Q+IK+AIGNAPWPIGVTMVGIHERSAREKI T +SVAHIMN+ETTRKYLQS+KRLMTFC
Sbjct: 266 AQFIKLAIGNAPWPIGVTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVKRLMTFC 325

Query: 372 QRRYPTMPSKAVEFNSLANGSDLQSLLAEER-VSGGGKLGSDERLRIMPA 417
           QRRY  +PSK++EFNSLANGS+L SLLAEER  +   +  S+ERL +MP+
Sbjct: 326 QRRYSALPSKSIEFNSLANGSNLHSLLAEERFFAADRERVSEERLWLMPS 357

[Close]

BLAST of Cucsa.084450 vs. NCBI nr
Match: gi|449458490|ref|XP_004146980.1| (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis sativus])

HSP 1 Score: 819.7 bits (2116), Expect = 2.3e-234
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Cucsa.084450 vs. NCBI nr
Match: gi|659100946|ref|XP_008451349.1| (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo])

HSP 1 Score: 807.0 bits (2083), Expect = 1.6e-230
Identity = 413/420 (98.33%), Postives = 415/420 (98.81%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQST SATA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSNPLASASTTSSSVA +STTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGG DEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGPDEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Cucsa.084450 vs. NCBI nr
Match: gi|1009148764|ref|XP_015892111.1| (PREDICTED: pre-mRNA-splicing factor 18 [Ziziphus jujuba])

HSP 1 Score: 693.7 bits (1789), Expect = 1.9e-196
Identity = 354/420 (84.29%), Postives = 392/420 (93.33%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQ+LA ETGG+RVFKRSEIEQ++IQ+LRE+EKRELEAK+ R + +S ++
Sbjct: 1   MDLLKQELLKKRQSLAEETGGRRVFKRSEIEQKRIQKLREQEKRELEAKSQRHAASSTSS 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           A A +  +KSNP  SA TT+S+ AT+S+ T SKSLTDEQNIDNLVLP+QEVIRRLRFLKQ
Sbjct: 61  AGAAT--AKSNP--SAITTTSNTATSSSATASKSLTDEQNIDNLVLPKQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDD++RLDRLK+VLK G+FEVDSD+TEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDESRLDRLKYVLKTGMFEVDSDMTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKE-DGAGEEGDGGGADEE-SADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLL 240
           QK + DG  E+GDGGG +EE SADGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLL
Sbjct: 181 QKTDVDGVVEDGDGGGGEEELSADGGSSGVDADKDLKRMKANFDELCDEDKILVFFKRLL 240

Query: 241 NEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVEC 300
           NEW QELDEMPEAEKRTAKGKSMVATFKQCARYL+PLFKFCRKK+LPDDIRQAL+VVVEC
Sbjct: 241 NEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKILPDDIRQALMVVVEC 300

Query: 301 CMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
           C+KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ
Sbjct: 301 CLKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPE 419
           S+KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEER+ GG +  S+ERLRI+PAPE
Sbjct: 361 SVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERIFGGDQ-ASEERLRILPAPE 415

[Close]

BLAST of Cucsa.084450 vs. NCBI nr
Match: gi|590717307|ref|XP_007050586.1| (Splicing factor Prp18 family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 691.4 bits (1783), Expect = 9.7e-196
Identity = 359/422 (85.07%), Postives = 393/422 (93.13%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQ+LA ETGG+RVFKRSE+EQ+QIQ+LRE+EKRELEAK+ RQSTTS++ 
Sbjct: 1   MDLLKQELLKKRQSLAQETGGRRVFKRSEMEQKQIQKLREQEKRELEAKSRRQSTTSSST 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
             A  TS+KSNP  SAS+T+S+ AT ST  +SKSLTDEQNIDNL LPRQEVIRRLRFLKQ
Sbjct: 61  TNA--TSAKSNP--SASSTASTTAT-STAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDD ARLDRLK+VLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQKTG+LSERKR
Sbjct: 121 PITLFGEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGMLSERKR 180

Query: 181 QKKEDGAG-EEGDGGGADEE-SADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLL 240
           + +E+G G E+G+GGG +EE S DGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLL
Sbjct: 181 KDREEGGGGEDGEGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLL 240

Query: 241 NEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVEC 300
           NEW QELDEM EAEKRTAKGKSMVATFKQCARYL+PLFKFCRKKVLPDDI QALLVVVEC
Sbjct: 241 NEWNQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDICQALLVVVEC 300

Query: 301 CMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
           CMKRDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ
Sbjct: 301 CMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPE 420
           S+KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEE+VSGG    SD+RLR+MPAP+
Sbjct: 361 SVKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKVSGGS--SSDDRLRLMPAPK 415

[Close]

BLAST of Cucsa.084450 vs. NCBI nr
Match: gi|802791077|ref|XP_012092225.1| (PREDICTED: pre-mRNA-splicing factor 18 [Jatropha curcas])

HSP 1 Score: 681.4 bits (1757), Expect = 1.0e-192
Identity = 349/421 (82.90%), Postives = 385/421 (91.45%), Query Frame = 1


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60
           MDLLKQELLKKRQ+LA +TGGKRVFKRSEI+Q++IQ+LRE+EKRELEAKA RQ     TA
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKRELEAKAQRQ-----TA 60

Query: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           A A +T+S ++  AS++ T+++  + ST TTSKSLTDEQNIDNLVLP+QEVIRRLRFLKQ
Sbjct: 61  AAATNTTSTTSNSASSTATTTATTSTSTATTSKSLTDEQNIDNLVLPKQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDD ARLDRLK+VLKAG+FEVDSD+TEGQTNDFLRDIAELRKRQKTGI SERKR
Sbjct: 121 PITLFGEDDAARLDRLKYVLKAGIFEVDSDMTEGQTNDFLRDIAELRKRQKTGIPSERKR 180

Query: 181 QKKEDGAGEEGD-GGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLN 240
           + +E+G GE+G+ G G  E SADGGSSGV+ DKDLKRMKANF+ELC+EDKILVFFKRLLN
Sbjct: 181 KDREEGGGEDGEVGEGEGELSADGGSSGVDADKDLKRMKANFEELCDEDKILVFFKRLLN 240

Query: 241 EWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECC 300
           EWKQELDEM EAEKRTAKGKSMVATFKQCARYL PLFKFCRKKVLPDDIRQALLVVVECC
Sbjct: 241 EWKQELDEMSEAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVECC 300

Query: 301 MKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           MKRDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGKLGSDERLRIMPAPED 420
           +KRLMTFCQRRYPT+PSKAVEFNSLANGSDL SLLAEER SGG +  SD RLR+MPAPE+
Sbjct: 361 VKRLMTFCQRRYPTVPSKAVEFNSLANGSDLHSLLAEERSSGGNQ-ASDGRLRLMPAPEE 415

The following BLAST results are available for this feature:

BLAST of Cucsa.084450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRP18_MOUSE	1.1e-53	34.37	Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prpf18 PE=1 SV=1	[more]
PRP18_HUMAN	1.1e-53	34.37	Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRPF18 PE=1 SV=1	[more]
PRP18_PONAB	1.4e-53	34.37	Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRPF18 PE=2 SV=1	[more]
PRP18_RAT	3.1e-53	34.11	Pre-mRNA-splicing factor 18 OS=Rattus norvegicus GN=Prpf18 PE=2 SV=1	[more]
PRP18_BOVIN	3.1e-53	34.11	Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF18 PE=2 SV=1	[more]

BLAST of Cucsa.084450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7C9_CUCSA	1.6e-234	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388420 PE=4 SV=1	[more]
A0A061DXM4_THECC	6.7e-196	85.07	Splicing factor Prp18 family protein isoform 1 OS=Theobroma cacao GN=TCM_004356 ...	[more]
A0A067JN48_JATCU	7.0e-193	82.90	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21921 PE=4 SV=1	[more]
A0A061DPM4_THECC	3.5e-192	85.51	Splicing factor Prp18 family protein isoform 2 (Fragment) OS=Theobroma cacao GN=...	[more]
A0A067FMY8_CITSI	4.5e-192	81.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014920mg PE=4 SV=1	[more]

BLAST of Cucsa.084450 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03140.1	5.5e-165	69.34	splicing factor Prp18 family protein	[more]
AT1G54590.1	4.3e-93	63.10	INVOLVED IN: RNA splicing	[more]

BLAST of Cucsa.084450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458490\|ref\|XP_004146980.1\|	2.3e-234	100.00	PREDICTED: pre-mRNA-splicing factor 18 [Cucumis sativus]	[more]
gi\|659100946\|ref\|XP_008451349.1\|	1.6e-230	98.33	PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]	[more]
gi\|1009148764\|ref\|XP_015892111.1\|	1.9e-196	84.29	PREDICTED: pre-mRNA-splicing factor 18 [Ziziphus jujuba]	[more]
gi\|590717307\|ref\|XP_007050586.1\|	9.7e-196	85.07	Splicing factor Prp18 family protein isoform 1 [Theobroma cacao]	[more]
gi\|802791077\|ref\|XP_012092225.1\|	1.0e-192	82.90	PREDICTED: pre-mRNA-splicing factor 18 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004098	Prp18
IPR014906	PRP4-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0005681	spliceosomal complex

Vocabulary: **Biological Process**
Term	Definition
GO:0008380	RNA splicing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.084450.1	Cucsa.084450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004098	Prp18	PFAM	PF02840	Prp18	coord: 232..373 score: 1.5
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 111..137 score: 7.3
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 106..157 score: 1.8
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	unknown	SSF158230	PRP4-like	coord: 99..141 score: 2.22
None	No IPR available	GENE3D	G3DSA:1.20.940.10		coord: 208..377 score: 1.4
None	No IPR available	PANTHER	PTHR13007	PRE-MRNA SPLICING FACTOR-RELATED	coord: 1..395 score: 6.1E
None	No IPR available	PANTHER	PTHR13007:SF19	PRE-MRNA-SPLICING FACTOR 18	coord: 1..395 score: 6.1E
None	No IPR available	unknown	SSF47938	Functional domain of the splicing factor Prp18	coord: 207..373 score: 2.88

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.084450	Cla014767	Watermelon (97103) v1	cgywmB094
Cucsa.084450	Csa7G388420	Cucumber (Chinese Long) v2	cgycuB085
Cucsa.084450	MELO3C015826	Melon (DHL92) v3.5.1	cgymeB093
Cucsa.084450	CSPI07G16300	Wild cucumber (PI 183967)	cgycpiB088
Cucsa.084450	CmaCh17G011800	Cucurbita maxima (Rimu)	cgycmaB0157
Cucsa.084450	CmaCh08G003450	Cucurbita maxima (Rimu)	cgycmaB0158
Cucsa.084450	CmoCh17G011560	Cucurbita moschata (Rifu)	cgycmoB0152
Cucsa.084450	CmoCh08G003420	Cucurbita moschata (Rifu)	cgycmoB0153
Cucsa.084450	Lsi02G022870	Bottle gourd (USVL1VR-Ls)	cgylsiB090
Cucsa.084450	MELO3C015826.2	Melon (DHL92) v3.6.1	cgymedB091
Cucsa.084450	CsaV3_7G028060	Cucumber (Chinese Long) v3	cgycucB087
Cucsa.084450	Cla97C09G169700	Watermelon (97103) v2	cgywmbB089
Cucsa.084450	Bhi09G000901	Wax gourd	cgywgoB104
Cucsa.084450	Carg07253	Silver-seed gourd	carcgyB0129
Cucsa.084450	Carg24883	Silver-seed gourd	carcgyB0063

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.084450	Wax gourd	cgywgoB105
Cucsa.084450	Watermelon (Charleston Gray)	cgywcgB091
Cucsa.084450	Watermelon (Charleston Gray)	cgywcgB092
Cucsa.084450	Watermelon (97103) v1	cgywmB095
Cucsa.084450	Cucurbita pepo (Zucchini)	cgycpeB0151
Cucsa.084450	Cucurbita pepo (Zucchini)	cgycpeB0153
Cucsa.084450	Bottle gourd (USVL1VR-Ls)	cgylsiB089
Cucsa.084450	Silver-seed gourd	carcgyB0075
Cucsa.084450	Silver-seed gourd	carcgyB0380
Cucsa.084450	Silver-seed gourd	carcgyB0842
Cucsa.084450	Watermelon (97103) v2	cgywmbB087