CmaCh08G003450 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G003450
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPre-mRNA-splicing factor 18
LocationCma_Chr08 : 1975011 .. 1978772 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTCTGAATTTCAATAGAGGTTTCCCTTTCCTTTCTCCTCCCTCTTTGAAATCAGTTCTGAAAGTAAGCCCTAACAGGATTCCGGGGAGGAGAACCAGAGCAGAACCAATGGATCTCCTGAAGCAAGAACTTCTCAAGAAACGTCAATCCCTAGCTACCGCAACCGGTGGCAAACGCTTCTTCAAGCGATCCGAGATTGAACAGAAGCAAATCCAGCAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAACCAAAGCTCTCCGCCAATCCACCAGCTCAGCCGCCACCGCCGAGGCCAACTCCACATCTTCCAAATCCAATTCATTAGCTTCCGCCTCCACTACTTCCTCTACCACTATTAACTCCGCCGCCACCACTTCGAAATCGCTTACGGACGAGCAGAACATCGACAACCTCGTCCTTCCTAGGCAGGAAGTAATCAGAAGGCTCCGGTTTCTGAAGCAGCCCATTACGCTATTCGGGGAAGATGATGATACTCGGCTCGACCGTTTGAAGTATGTGCTGAAAGCGGGACTTTTCGAGGTGGATAGTGATTTGACGGAGGGGCAAACGAACGATTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGTATTTTGAGTGAGAGGAAGAGGCAGAAGAAGGAAGACGGCGCTGGAGAAGAGGGCGAAGGGGGTGGGGCTGACGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTCGACGCTGATAAAGATTTGAAGAGAATGAAAGCGAATTTTGATGAATTATGTCAAGAAGACAAGATACTAGTATTCTTTAAGAGGTTGTTGAATGAGTGGAACCAGGAATTGGATGAAATGCCCGAAGCAGAGAAGCGGACGGCGAAAGGGAAATCTATGGTAGCGACGTTCAAGCAGTGTGCTCGCTATTTGCATCCTCTGTTCAAGTTTTGTAGGAAGAAGGTACAATTTTGTCCCTATATACTTATTCAATTTGGTGAATGTTCCATTTTCCCTTGATTCTGCTTTATGTTATCTTTTGACTTCATGGTAGATTAGAGAATAGCTAGAGCTTCTTTTTCTGTCATTCCTTTCGCTCTGCAAGTGCTCTGATGGAAAAATGGGAAAATGTTGAGGATTATTGGGAGAGGAGTCAACATCGGCTAATTAAGGGGTTGATCATGAGTTTATAAGTAAGAAACACTATCTTCATTGGTATGAAGACTTTTGAGGAAACCAAAAGCAAAACCTATGGAGATCCGTGGTTCCAAACATGGTATCAGAGCCATGTAAATAAAATCCTAAAATGTTAGATCAAAGAAGTTGTGAGTCTCGAAAGTGTAGTCAAAAGTGCTCAAGTGTCGAACAATGTACTTTGTTCGAAGGCTCCAGAACCGGAGTTGAGCCTCGATTAAGGGGAGGTTCTATGGTGTACTTTGTTCAAGGGAAGGATTGTTGAGGATTGTTGAGGATTGTTGGGAGAGGAGTCCCACATCGGCTAATTAAGGGGTTGATCATGAGTTTACAAGTATGGAACACTATCTTCATTGGTATGAGGTATTTTGGGGAAACCAAAAGCAAAACTACGAGAGTTTATGCTCAAAGTGGACAATATGATATCATTGTAGAGGTGGATGTTTTTTAAGAGAAAAAAGTTCCCACATGAGCTTGTAGATTTCCTCTTTAGGTTGATTATCATAGGAAGCAATCTCTAACAAATTACATCCTACGGTTTTCCTCTTTAACTATGATTATCAATCAAGCAGCGAAGAGAGTAGGCTGCTAACTTAAGGGGGAGGACCACTTGCCACTTGAATCTCATGCGCATGTTATTCTGCAGTTCCTCTGCCAATTGGCGCTTGAGTAAGAGATGTCTTTGGGATTCAACGTCTTTCATGCGGAGAAAGCGAGAGGGACCAATTTGGAGGCCCTTTGTTTTATGTCGTGATAATCTTATGAAAGAGCTCCCATTGGAAAAGCTCAACTTGTGAGATCCCACAATAGTTGGAGAGAACGAAACATTACTTATAAGGGTGTGGAAATCTCTTCCTAGAAGACGCGTTTTAAAACCTTGGGGGGAAGCCAAGAAGGGAAAGCCCAAAGAGGACAATGCTAGCTGTGAACTTGAATTGTTACTAATGGTATAAGAGCCAGACACCAGGCGGTATACCAGCGAGGACGCTGGGCCCCAAGAGGGGTGGATTGTGAGATCTCACATTGGTTGGAGAGAAGAACAAAACATTTCTTATAAGAGTGTGGAAACCTCTCCCTAGAAGACACGTTTTAAAATCTTGAGGGGAAGCCAAGAAAGGAAAACCCAAAGAGAACAATATCTACTAGCGGTGGGGTGGGCTTGGGCTTGGGCTGTTACACGACTTTCTTTGAACATATATGAGTGACATATCATCTTGTAAAGATTTGGGTTCTTTGAGAATCCTTTGTTCAAAATATCCTTGAATAGGTAGTTGCATGAACGGACCTCCTGTTAGTCAGACTGCCAAATTCATTTATTTTGGAAGAACAGTAAGTAGAACTTAGAAGTGGGAGATCAAGTTTAGGAAAGAGGCCCGTTTTGTGATTTCATCATCCAGATAAGAAAATCTAGAATCAGGATCCCAATTTCGAGTAGAGGAGTTCCAAATATCTTGGATAGAAGTGGTTCAATCTTCTTGGGAAAGCGCATTCCAAAGCTTGTAGAACTGCCATTCCAATGGAGGTTTTGACCCTCTAGTGGAGTTAAGTTTTCTTAATTGATTTTAGGTCATCGATGGCCTCTCGACGCGTGTAGAGAAGGAGGTACTAACAAAAAGTCACCAAATTTAGCCACCATAACTTTCCTTCATAAAACTTATATTTTTATTATAGAATCTCAAGTAGATCTATATTTTGTTAATGCCAAGTATCATGTTAGATTTTAATATTCTTCTTTTAGATTCTTCCTGACGATATTCGGCAAGCATTGTTGGTGGTCGTTGAATGTTGCATGGAGCGAGACTATCTAGCTGCAATGGATCAATACATTAAGATGGCCATTGGAAATGCCCCCTGGCCTATTGGTGTCACTATGGTTGGTATCCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTAGCCCATATCATGAACGATGAGACGACAAGGAAATACTTGCAATCGATCAAGAGATTGATGACGTTCTGTCAACGACGCTATCCAACAATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAGTCCCTGCTAGCAGAAGAGAGAGTCTCTGGAGGATGGGGCAAGCAGGGTTCTGATGAAAGGCTTCGCATCATGCACTCCCCGGAAGATAGCTAGCTAGCAAGTAAGAATATACTCTCCTGGCTGCTACTCATTACTCTTCTGCATATTTTGGTAGTCAGTCAGCAACTTCTGAGTACCGTTTGATATCAAAGTCTATAGTATTCGTTCAAGATAGCTACCTGGTAAGAAGATTATCTCTTGGTTACCATTGTTTATGTCTCTTTGTTTGTAATTTGAAGTTTCATCAGCTTAGTTTGGTAGTCAGTAAGTCAATGTCTGGGCATTGATTATGAAGAGACTTAAGGCTCAATCGTTAGAACATATCGTTGGAAACGACGACCTTTTATATTGGGCTTCTCTAGAGCCCTTGAACTTCTCCTTAATTAAGGCTTGACATCTTCTAAGCTTAAGGTCCAATGGTTAGTTCATACGGTTAGAAATGACCCTCCACGTTGGGCTTCTCTAGAGCCCTTGA

mRNA sequence

CGTTCTGAATTTCAATAGAGGTTTCCCTTTCCTTTCTCCTCCCTCTTTGAAATCAGTTCTGAAAGTAAGCCCTAACAGGATTCCGGGGAGGAGAACCAGAGCAGAACCAATGGATCTCCTGAAGCAAGAACTTCTCAAGAAACGTCAATCCCTAGCTACCGCAACCGGTGGCAAACGCTTCTTCAAGCGATCCGAGATTGAACAGAAGCAAATCCAGCAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAACCAAAGCTCTCCGCCAATCCACCAGCTCAGCCGCCACCGCCGAGGCCAACTCCACATCTTCCAAATCCAATTCATTAGCTTCCGCCTCCACTACTTCCTCTACCACTATTAACTCCGCCGCCACCACTTCGAAATCGCTTACGGACGAGCAGAACATCGACAACCTCGTCCTTCCTAGGCAGGAAGTAATCAGAAGGCTCCGGTTTCTGAAGCAGCCCATTACGCTATTCGGGGAAGATGATGATACTCGGCTCGACCGTTTGAAGTATGTGCTGAAAGCGGGACTTTTCGAGGTGGATAGTGATTTGACGGAGGGGCAAACGAACGATTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGTATTTTGAGTGAGAGGAAGAGGCAGAAGAAGGAAGACGGCGCTGGAGAAGAGGGCGAAGGGGGTGGGGCTGACGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTCGACGCTGATAAAGATTTGAAGAGAATGAAAGCGAATTTTGATGAATTATGTCAAGAAGACAAGATACTAGTATTCTTTAAGAGGTTGTTGAATGAGTGGAACCAGGAATTGGATGAAATGCCCGAAGCAGAGAAGCGGACGGCGAAAGGGAAATCTATGGTAGCGACGTTCAAGCAGTGTGCTCGCTATTTGCATCCTCTGTTCAAGTTTTGTAGGAAGAAGATTCTTCCTGACGATATTCGGCAAGCATTGTTGGTGGTCGTTGAATGTTGCATGGAGCGAGACTATCTAGCTGCAATGGATCAATACATTAAGATGGCCATTGGAAATGCCCCCTGGCCTATTGGTGTCACTATGGTTGGTATCCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTAGCCCATATCATGAACGATGAGACGACAAGGAAATACTTGCAATCGATCAAGAGATTGATGACGTTCTGTCAACGACGCTATCCAACAATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAGTCCCTGCTAGCAGAAGAGAGAGTCTCTGGAGGATGGGGCAAGCAGGGTTCTGATGAAAGGCTTCGCATCATGCACTCCCCGGAAGATAGCTAGCTAGCAAGTAAGAATATACTCTCCTGGCTGCTACTCATTACTCTTCTGCATATTTTGGTAGTCAGTCAGCAACTTCTGAGTACCGTTTGATATCAAAGTCTATAGTATTCGTTCAAGATAGCTACCTGGTAAGAAGATTATCTCTTGGTTACCATTGTTTATGTCTCTTTGTTTGTAATTTGAAGTTTCATCAGCTTAGTTTGGTAGTCAGTAAGTCAATGTCTGGGCATTGATTATGAAGAGACTTAAGGCTCAATCGTTAGAACATATCGTTGGAAACGACGACCTTTTATATTGGGCTTCTCTAGAGCCCTTGAACTTCTCCTTAATTAAGGCTTGACATCTTCTAAGCTTAAGGTCCAATGGTTAGTTCATACGGTTAGAAATGACCCTCCACGTTGGGCTTCTCTAGAGCCCTTGA

Coding sequence (CDS)

ATGGATCTCCTGAAGCAAGAACTTCTCAAGAAACGTCAATCCCTAGCTACCGCAACCGGTGGCAAACGCTTCTTCAAGCGATCCGAGATTGAACAGAAGCAAATCCAGCAGCTACGCGAGAAAGAGAAGCGCGAATTGGAAACCAAAGCTCTCCGCCAATCCACCAGCTCAGCCGCCACCGCCGAGGCCAACTCCACATCTTCCAAATCCAATTCATTAGCTTCCGCCTCCACTACTTCCTCTACCACTATTAACTCCGCCGCCACCACTTCGAAATCGCTTACGGACGAGCAGAACATCGACAACCTCGTCCTTCCTAGGCAGGAAGTAATCAGAAGGCTCCGGTTTCTGAAGCAGCCCATTACGCTATTCGGGGAAGATGATGATACTCGGCTCGACCGTTTGAAGTATGTGCTGAAAGCGGGACTTTTCGAGGTGGATAGTGATTTGACGGAGGGGCAAACGAACGATTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGTATTTTGAGTGAGAGGAAGAGGCAGAAGAAGGAAGACGGCGCTGGAGAAGAGGGCGAAGGGGGTGGGGCTGACGAAGAAAGTGCCGATGGAGGGTCGAGTGGGGTCGACGCTGATAAAGATTTGAAGAGAATGAAAGCGAATTTTGATGAATTATGTCAAGAAGACAAGATACTAGTATTCTTTAAGAGGTTGTTGAATGAGTGGAACCAGGAATTGGATGAAATGCCCGAAGCAGAGAAGCGGACGGCGAAAGGGAAATCTATGGTAGCGACGTTCAAGCAGTGTGCTCGCTATTTGCATCCTCTGTTCAAGTTTTGTAGGAAGAAGATTCTTCCTGACGATATTCGGCAAGCATTGTTGGTGGTCGTTGAATGTTGCATGGAGCGAGACTATCTAGCTGCAATGGATCAATACATTAAGATGGCCATTGGAAATGCCCCCTGGCCTATTGGTGTCACTATGGTTGGTATCCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTAGCCCATATCATGAACGATGAGACGACAAGGAAATACTTGCAATCGATCAAGAGATTGATGACGTTCTGTCAACGACGCTATCCAACAATGCCATCCAAGGCAGTAGAATTTAACAGCTTGGCGAACGGTAGCGACCTGCAGTCCCTGCTAGCAGAAGAGAGAGTCTCTGGAGGATGGGGCAAGCAGGGTTCTGATGAAAGGCTTCGCATCATGCACTCCCCGGAAGATAGCTAG

Protein sequence

MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAATAEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECCMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPEDS
Homology
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BLAST of CmaCh08G003450 vs. Swiss-Prot
Match: PRP18_BOVIN (Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-45
Identity = 134/386 (34.72%), Postives = 204/386 (52.85%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATAT---GGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSS 60
           MD+LK E+L+KRQ +         K++FKRSE+ +K+ +   E+   +++ K   Q    
Sbjct: 1   MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKDEDQKP-- 60

Query: 61  AATAEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
                                TSS  +       + L        + L RQEVIRRLR  
Sbjct: 61  --------------------LTSSNPVLELELAEEKLP-------MTLSRQEVIRRLRER 120

Query: 121 KQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
            +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    ++   
Sbjct: 121 GEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNELV--- 180

Query: 181 KRQKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLL 240
                  G  E GE    ++      ++ ++  + L       D+    D I  F K LL
Sbjct: 181 -------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLL 240

Query: 241 NEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVEC 300
             W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++ 
Sbjct: 241 GVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKF 300

Query: 301 CMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
            ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q
Sbjct: 301 MLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQ 342

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSL 384
            +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 GLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]
BLAST of CmaCh08G003450 vs. Swiss-Prot
Match: PRP18_PONAB (Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-44
Identity = 136/386 (35.23%), Postives = 202/386 (52.33%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATAT---GGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSS 60
           MD+LK E+L+KRQ +         K++FKRSE+ +K+       E+   E    R     
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKE-------EEAYFERCGYR----- 60

Query: 61  AATAEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
               +      K         TSS  +       + L        + L RQEVIRRLR  
Sbjct: 61  ---IQPKEEDQKP-------LTSSNPVLELELAEEKLP-------MTLSRQEVIRRLRER 120

Query: 121 KQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
            +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+   
Sbjct: 121 GEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV--- 180

Query: 181 KRQKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLL 240
                  G  E GE    ++      ++ ++  + L       D+    D I  F K LL
Sbjct: 181 -------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLL 240

Query: 241 NEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVEC 300
             W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++ 
Sbjct: 241 GVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKF 300

Query: 301 CMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
            ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q
Sbjct: 301 MLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQ 342

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSL 384
            +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 GLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]
BLAST of CmaCh08G003450 vs. Swiss-Prot
Match: PRP18_HUMAN (Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRPF18 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-43
Identity = 134/386 (34.72%), Postives = 199/386 (51.55%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATAT---GGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSS 60
           MD+LK E+L+KRQ +         K++FKRSE+ +K+                       
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKE----------------------E 60

Query: 61  AATAEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
            A  E      +         TSS  +       + L        + L RQEVIRRLR  
Sbjct: 61  EAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLP-------MTLSRQEVIRRLRER 120

Query: 121 KQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
            +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+   
Sbjct: 121 GEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV--- 180

Query: 181 KRQKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLL 240
                  G  E GE    ++      ++ ++  + L       D+    D I  F K LL
Sbjct: 181 -------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLL 240

Query: 241 NEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVEC 300
             W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++ 
Sbjct: 241 GVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKF 300

Query: 301 CMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
            ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q
Sbjct: 301 MLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQ 342

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSL 384
            +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 GLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]
BLAST of CmaCh08G003450 vs. Swiss-Prot
Match: PRP18_MOUSE (Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prpf18 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.7e-43
Identity = 134/386 (34.72%), Postives = 199/386 (51.55%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATAT---GGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSS 60
           MD+LK E+L+KRQ +         K++FKRSE+ +K+                       
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELARKE----------------------E 60

Query: 61  AATAEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
            A  E      +         TSS  +       + L        + L RQEVIRRLR  
Sbjct: 61  EAYYERCGYKIQPKEDDQKPLTSSNPVLELELAEEKLP-------MTLSRQEVIRRLRER 120

Query: 121 KQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
            +PI LFGE D     RL+ +       +  ++ +G  ND    + ++ ++    I+   
Sbjct: 121 GEPIRLFGETDYDAFQRLRKIEI-----LTPEVNKGLRNDLKAALDKIDQQYLNEIV--- 180

Query: 181 KRQKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLL 240
                  G  E GE    ++      ++ ++  + L       D+    D I  F K LL
Sbjct: 181 -------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFLL 240

Query: 241 NEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVEC 300
             W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+ LP DI++++  +++ 
Sbjct: 241 GVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKRNLPADIKESITDIIKF 300

Query: 301 CMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQ 360
            ++R+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q
Sbjct: 301 MLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQ 342

Query: 361 SIKRLMTFCQRRYPTMPSKAVEFNSL 384
            +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 GLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]
BLAST of CmaCh08G003450 vs. Swiss-Prot
Match: PRP18_DANRE (Pre-mRNA-splicing factor 18 OS=Danio rerio GN=prpf18 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.2e-43
Identity = 131/388 (33.76%), Postives = 200/388 (51.55%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATAT---GGKRFFKRSEIEQKQIQQLREK--EKRELETKALRQST 60
           MD+LK E+ +KR+ +         K++FKR+E+ +K+ +    +   K +   +   QST
Sbjct: 1   MDILKAEIARKRKLIEEKELIDDSKKYFKRAELARKEEEDYYRRCGYKMDKPEEEAPQST 60

Query: 61  SSAATAEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLR 120
           S+    E   T  K                                 + L RQEVIRRLR
Sbjct: 61  SANPVLELELTEEKLP-------------------------------MTLSRQEVIRRLR 120

Query: 121 FLKQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILS 180
              +PI LFGE D     RL+ +          ++ +G  ND    + ++ ++    I+ 
Sbjct: 121 ERGEPIRLFGESDYDAFQRLRKIEILA-----PEVNKGLRNDLKAAMDKIDQQYLNEIV- 180

Query: 181 ERKRQKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKR 240
                    G  E  E     +      ++ ++  + L     N +++   D I    + 
Sbjct: 181 ---------GGAEGAELDTQHDLKVHEENTTIEELEALGASLGNGNDVRDMDIINKVLRF 240

Query: 241 LLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVV 300
           LL  W ++L+   +  KR+ +GK   AT KQ   YL PLF+  RKK LP DI++++  ++
Sbjct: 241 LLGVWAKDLNSREDHIKRSVQGKLASATQKQTESYLEPLFRKLRKKNLPADIKESITDII 300

Query: 301 ECCMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKY 360
           +  +ER+Y+ A D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY
Sbjct: 301 KFMLEREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKY 342

Query: 361 LQSIKRLMTFCQRRYPTMPSKAVEFNSL 384
           +Q +KRLMT CQ+ +PT PSK VE+N+L
Sbjct: 361 IQGLKRLMTICQKHFPTDPSKCVEYNAL 342

[Close]
BLAST of CmaCh08G003450 vs. TrEMBL
Match: A0A0A0K7C9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388420 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 2.7e-205
Identity = 392/421 (93.11%), Postives = 403/421 (95.72%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQ+LAT TGGKR FKRSEIEQ+QIQQLREKEKRELE KALRQST+SA  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AEANSTSSKSNSLASASTTSSTTI-NSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSN LASASTTSS+   NS  TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDD RLDRLK+VLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLNE 240
           QKKEDGAGEEG+GGGADEESADGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECCM 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 ERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           +RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPED 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGG GK GSDERLRIM +PED
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGG-GKLGSDERLRIMPAPED 420

[Close]
BLAST of CmaCh08G003450 vs. TrEMBL
Match: A0A061DXM4_THECC (Splicing factor Prp18 family protein isoform 1 OS=Theobroma cacao GN=TCM_004356 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 2.9e-183
Identity = 356/422 (84.36%), Postives = 388/422 (91.94%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGG+R FKRSE+EQKQIQ+LRE+EKRELE K+ RQST+S++T
Sbjct: 1   MDLLKQELLKKRQSLAQETGGRRVFKRSEMEQKQIQKLREQEKRELEAKSRRQSTTSSST 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
              N+TS+KSN   SAS+T+STT  S A +SKSLTDEQNIDNL LPRQEVIRRLRFLKQP
Sbjct: 61  T--NATSAKSNP--SASSTASTTATSTAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD  RLDRLKYVLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQKTG+LSERKR+
Sbjct: 121 ITLFGEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGMLSERKRK 180

Query: 181 KKEDGAG-EEGEGGGADEE-SADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLN 240
            +E+G G E+GEGGG +EE S DGGSSGVD DKDLKRMKANFDELC EDKILVFFKRLLN
Sbjct: 181 DREEGGGGEDGEGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLLN 240

Query: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECC 300
           EWNQELDEM EAEKRTAKGKSMVATFKQCARYL+PLFKFCRKK+LPDDI QALLVVVECC
Sbjct: 241 EWNQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDICQALLVVVECC 300

Query: 301 MERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           M+RDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPE 420
           +KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEE+VSGG     SD+RLR+M +P+
Sbjct: 361 VKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKVSGG---SSSDDRLRLMPAPK 415

[Close]
BLAST of CmaCh08G003450 vs. TrEMBL
Match: W9R737_9ROSA (Pre-mRNA-splicing factor 18 OS=Morus notabilis GN=L484_025077 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 2.5e-182
Identity = 354/422 (83.89%), Postives = 383/422 (90.76%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGGKRFFKRSEIEQK+IQ+LRE+EKRELE K+ RQ+T  A T
Sbjct: 1   MDLLKQELLKKRQSLAEDTGGKRFFKRSEIEQKKIQKLREQEKRELEAKSQRQTT--APT 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
           A    +++ S++ ASA+TTSST     ATTSKS TDEQN+DNLVL +QEVIRRLR LK P
Sbjct: 61  ASTTKSNASSSATASATTTSST-----ATTSKSQTDEQNVDNLVLSKQEVIRRLRLLKHP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD++RLDRLKYVLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQK+GILSERKRQ
Sbjct: 121 ITLFGEDDESRLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKSGILSERKRQ 180

Query: 181 KKE-DGAGEEGEGGGADEE-SADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLN 240
           K + DG  E+GEGG A+EE SADGGSSGVDADKDLKRMKAN DELC EDKILVFFKRLLN
Sbjct: 181 KTDVDGVAEDGEGGVAEEELSADGGSSGVDADKDLKRMKANLDELCDEDKILVFFKRLLN 240

Query: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECC 300
           EWN+EL+EM E EKRTAKGKSMVATFKQCARYL+PLFKFCRKK+LPDDIRQALLVVVECC
Sbjct: 241 EWNEELNEMQETEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECC 300

Query: 301 MERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           M+RDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPE 420
           IKRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEERVSGG   Q  +ERLRIM +P 
Sbjct: 361 IKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERVSGGSSSQAGEERLRIMPAPR 415

[Close]
BLAST of CmaCh08G003450 vs. TrEMBL
Match: A0A067JN48_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21921 PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 5.5e-182
Identity = 354/421 (84.09%), Postives = 383/421 (90.97%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGGKR FKRSEI+QK+IQ+LRE+EKRELE KA RQ T++AAT
Sbjct: 1   MDLLKQELLKKRQSLAQDTGGKRVFKRSEIQQKEIQKLREQEKRELEAKAQRQ-TAAAAT 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
              N+TS+ SNS +S +TT++TT  S ATTSKSLTDEQNIDNLVLP+QEVIRRLRFLKQP
Sbjct: 61  ---NTTSTTSNSASSTATTTATTSTSTATTSKSLTDEQNIDNLVLPKQEVIRRLRFLKQP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD  RLDRLKYVLKAG+FEVDSD+TEGQTNDFLRDIAELRKRQKTGI SERKR+
Sbjct: 121 ITLFGEDDAARLDRLKYVLKAGIFEVDSDMTEGQTNDFLRDIAELRKRQKTGIPSERKRK 180

Query: 181 KKEDGAGEEGE-GGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLNE 240
            +E+G GE+GE G G  E SADGGSSGVDADKDLKRMKANF+ELC EDKILVFFKRLLNE
Sbjct: 181 DREEGGGEDGEVGEGEGELSADGGSSGVDADKDLKRMKANFEELCDEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECCM 300
           W QELDEM EAEKRTAKGKSMVATFKQCARYL PLFKFCRKK+LPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMSEAEKRTAKGKSMVATFKQCARYLTPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 ERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           +RDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+
Sbjct: 301 KRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSV 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPED 420
           KRLMTFCQRRYPT+PSKAVEFNSLANGSDL SLLAEER SG  G Q SD RLR+M +PE+
Sbjct: 361 KRLMTFCQRRYPTVPSKAVEFNSLANGSDLHSLLAEERSSG--GNQASDGRLRLMPAPEE 415

[Close]
BLAST of CmaCh08G003450 vs. TrEMBL
Match: A0A061DPM4_THECC (Splicing factor Prp18 family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_004356 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 8.0e-181
Identity = 353/414 (85.27%), Postives = 381/414 (92.03%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGG+R FKRSE+EQKQIQ+LRE+EKRELE K+ RQST+S++T
Sbjct: 1   MDLLKQELLKKRQSLAQETGGRRVFKRSEMEQKQIQKLREQEKRELEAKSRRQSTTSSST 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
              N+TS+KSN   SAS+T+STT  S A +SKSLTDEQNIDNL LPRQEVIRRLRFLKQP
Sbjct: 61  T--NATSAKSNP--SASSTASTTATSTAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD  RLDRLKYVLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQKTG+LSERKR+
Sbjct: 121 ITLFGEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGMLSERKRK 180

Query: 181 KKEDGAG-EEGEGGGADEE-SADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLN 240
            +E+G G E+GEGGG +EE S DGGSSGVD DKDLKRMKANFDELC EDKILVFFKRLLN
Sbjct: 181 DREEGGGGEDGEGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLLN 240

Query: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECC 300
           EWNQELDEM EAEKRTAKGKSMVATFKQCARYL+PLFKFCRKK+LPDDI QALLVVVECC
Sbjct: 241 EWNQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDICQALLVVVECC 300

Query: 301 MERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           M+RDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLR 413
           +KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEE+VSGG     SD+RLR
Sbjct: 361 VKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKVSGG---SSSDDRLR 407

[Close]
BLAST of CmaCh08G003450 vs. TAIR10
Match: AT1G03140.1 (AT1G03140.1 splicing factor Prp18 family protein)

HSP 1 Score: 547.7 bits (1410), Expect = 6.1e-156
Identity = 301/424 (70.99%), Postives = 356/424 (83.96%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLL++E+LKKR+SLA  +GGK+FFKRSEIEQK+IQ+LRE+E+RE E KA R++ ++A+ 
Sbjct: 1   MDLLREEILKKRKSLAEESGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASG 60

Query: 61  AEANSTSS---KSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFL 120
            +  S+ S    SN+  SAS+ SS +  +A   SK+LTDE    NL+LPRQEVIRRLRFL
Sbjct: 61  GDGKSSGSAPGSSNAATSASSKSSASDAAAIADSKALTDE----NLILPRQEVIRRLRFL 120

Query: 121 KQPITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSER 180
           KQP+TLFGEDD +RLDRLKYVLK GLFEVDSD+TEGQTNDFLRDIAEL+KRQK+G++ +R
Sbjct: 121 KQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFLRDIAELKKRQKSGMMGDR 180

Query: 181 KRQKKEDGAGEEGEGGGADEESADGG-SSGVDADKDLKRMKANFDELCQEDKILVFFKRL 240
           KR+ +++   +EG+ G   E+   GG SS VDADKD+KR+KANF++LC EDKILVF+K+L
Sbjct: 181 KRKSRDERGRDEGDRGETREDELSGGESSDVDADKDMKRLKANFEDLCDEDKILVFYKKL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVE 300
           L EW QELD M   E+RTAKGK MVATFKQCARYL PLF  CRKK LP DIRQAL+V+V 
Sbjct: 241 LIEWKQELDAMENTERRTAKGKQMVATFKQCARYLVPLFNLCRKKGLPADIRQALMVMVN 300

Query: 301 CCMERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360
            C++RDYLAAMD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL
Sbjct: 301 HCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYL 360

Query: 361 QSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHS 420
           QS+KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEER  GG  +Q S+ERLR+M S
Sbjct: 361 QSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPS 420

[Close]
BLAST of CmaCh08G003450 vs. TAIR10
Match: AT1G54590.1 (AT1G54590.1 INVOLVED IN: RNA splicing)

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-90
Identity = 183/290 (63.10%), Postives = 223/290 (76.90%), Query Frame = 1 

Query: 131 RLDRLKYVLKAGLFE-VDSDLTEGQTNDFLRDIAELRKRQKT-GILSERKRQKKEDGAGE 190
           RLDRLKYVLK GLFE VD+D+T+G+TNDFLRDI EL+KR+++ G++++RKR+   D    
Sbjct: 86  RLDRLKYVLKEGLFEEVDNDMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSNDD--- 145

Query: 191 EGEGGGADEESADGGSSGVDADKDLKRM-KANFDELCQEDKILVFFKRLLNEWNQELDEM 250
             E  GA++E             DLK + +ANF++LC EDKILVF K+LL EW QEL+ M
Sbjct: 146 --ELIGAEKE-------------DLKLLEEANFEDLCDEDKILVFCKKLLLEWKQELEAM 205

Query: 251 PEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECCMERDYLAAM 310
              E+RTA GK M+ATF QCARYL PLF  CR K LP DIRQ L+V+V C ++RDYL A 
Sbjct: 206 ENTERRTAIGKQMLATFNQCARYLTPLFHLCRNKCLPADIRQGLMVMVNCWIKRDYLDAT 265

Query: 311 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFC 370
            Q+IK+AIGNAPWPIGVTMVGIHERSAREKI T +SVAHIMN+ETTRKYLQS+KRLMTFC
Sbjct: 266 AQFIKLAIGNAPWPIGVTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVKRLMTFC 325

Query: 371 QRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHS 417
           QRRY  +PSK++EFNSLANGS+L SLLAEER      ++ S+ERL +M S
Sbjct: 326 QRRYSALPSKSIEFNSLANGSNLHSLLAEERFFAADRERVSEERLWLMPS 357

[Close]
BLAST of CmaCh08G003450 vs. NCBI nr
Match: gi|659100946|ref|XP_008451349.1| (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo])

HSP 1 Score: 724.5 bits (1869), Expect = 1.0e-205
Identity = 393/421 (93.35%), Postives = 404/421 (95.96%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQ+LAT TGGKR FKRSEIEQKQIQQLREKEKRELE KALRQST+SA  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AEANSTSSKSNSLASASTTSSTT-INSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSN LASASTTSS+  I+S  TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDD RLDRLK+VLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLNE 240
           QKKEDGAGEEG+GGG DEESADGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGPDEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECCM 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQALLVVVECCM
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 ERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           +RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPED 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGG GK GSDERLRIM +PED
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGG-GKLGSDERLRIMPAPED 420

[Close]
BLAST of CmaCh08G003450 vs. NCBI nr
Match: gi|449458490|ref|XP_004146980.1| (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis sativus])

HSP 1 Score: 722.6 bits (1864), Expect = 3.9e-205
Identity = 392/421 (93.11%), Postives = 403/421 (95.72%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQ+LAT TGGKR FKRSEIEQ+QIQQLREKEKRELE KALRQST+SA  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AEANSTSSKSNSLASASTTSSTTI-NSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AEA STSSKSN LASASTTSS+   NS  TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDD RLDRLK+VLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGEGGGADEESADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLNE 240
           QKKEDGAGEEG+GGGADEESADGGSSGV+ DKDLKRMKANFDELC+EDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECCM 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK+LPDDIRQALLVVVECCM
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKVLPDDIRQALLVVVECCM 300

Query: 301 ERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360
           +RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI
Sbjct: 301 KRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSI 360

Query: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPED 420
           KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGG GK GSDERLRIM +PED
Sbjct: 361 KRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGG-GKLGSDERLRIMPAPED 420

[Close]
BLAST of CmaCh08G003450 vs. NCBI nr
Match: gi|1009148764|ref|XP_015892111.1| (PREDICTED: pre-mRNA-splicing factor 18 [Ziziphus jujuba])

HSP 1 Score: 650.2 bits (1676), Expect = 2.5e-183
Identity = 354/420 (84.29%), Postives = 387/420 (92.14%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGG+R FKRSEIEQK+IQ+LRE+EKRELE K+ R + SS  T
Sbjct: 1   MDLLKQELLKKRQSLAEETGGRRVFKRSEIEQKRIQKLREQEKRELEAKSQRHAASS--T 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
           + A + ++KSN  A  +TTS+T  +S+AT SKSLTDEQNIDNLVLP+QEVIRRLRFLKQP
Sbjct: 61  SSAGAATAKSNPSA-ITTTSNTATSSSATASKSLTDEQNIDNLVLPKQEVIRRLRFLKQP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD++RLDRLKYVLK G+FEVDSD+TEGQTNDFLRDIAELRKRQKTGILSERKRQ
Sbjct: 121 ITLFGEDDESRLDRLKYVLKTGMFEVDSDMTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180

Query: 181 KKE-DGAGEEGEGGGADEE-SADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLN 240
           K + DG  E+G+GGG +EE SADGGSSGVDADKDLKRMKANFDELC EDKILVFFKRLLN
Sbjct: 181 KTDVDGVVEDGDGGGGEEELSADGGSSGVDADKDLKRMKANFDELCDEDKILVFFKRLLN 240

Query: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECC 300
           EWNQELDEMPEAEKRTAKGKSMVATFKQCARYL+PLFKFCRKKILPDDIRQAL+VVVECC
Sbjct: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKILPDDIRQALMVVVECC 300

Query: 301 MERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           ++RDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 LKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPE 419
           +KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEER+ G  G Q S+ERLRI+ +PE
Sbjct: 361 VKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERIFG--GDQASEERLRILPAPE 415

[Close]
BLAST of CmaCh08G003450 vs. NCBI nr
Match: gi|590717307|ref|XP_007050586.1| (Splicing factor Prp18 family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 649.4 bits (1674), Expect = 4.2e-183
Identity = 356/422 (84.36%), Postives = 388/422 (91.94%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGG+R FKRSE+EQKQIQ+LRE+EKRELE K+ RQST+S++T
Sbjct: 1   MDLLKQELLKKRQSLAQETGGRRVFKRSEMEQKQIQKLREQEKRELEAKSRRQSTTSSST 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
              N+TS+KSN   SAS+T+STT  S A +SKSLTDEQNIDNL LPRQEVIRRLRFLKQP
Sbjct: 61  T--NATSAKSNP--SASSTASTTATSTAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD  RLDRLKYVLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQKTG+LSERKR+
Sbjct: 121 ITLFGEDDAARLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKTGMLSERKRK 180

Query: 181 KKEDGAG-EEGEGGGADEE-SADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLN 240
            +E+G G E+GEGGG +EE S DGGSSGVD DKDLKRMKANFDELC EDKILVFFKRLLN
Sbjct: 181 DREEGGGGEDGEGGGGEEELSGDGGSSGVDMDKDLKRMKANFDELCDEDKILVFFKRLLN 240

Query: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECC 300
           EWNQELDEM EAEKRTAKGKSMVATFKQCARYL+PLFKFCRKK+LPDDI QALLVVVECC
Sbjct: 241 EWNQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDICQALLVVVECC 300

Query: 301 MERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           M+RDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPE 420
           +KRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEE+VSGG     SD+RLR+M +P+
Sbjct: 361 VKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEEKVSGG---SSSDDRLRLMPAPK 415

[Close]
BLAST of CmaCh08G003450 vs. NCBI nr
Match: gi|703076739|ref|XP_010090411.1| (Pre-mRNA-splicing factor 18 [Morus notabilis])

HSP 1 Score: 646.4 bits (1666), Expect = 3.6e-182
Identity = 354/422 (83.89%), Postives = 383/422 (90.76%), Query Frame = 1 

Query: 1   MDLLKQELLKKRQSLATATGGKRFFKRSEIEQKQIQQLREKEKRELETKALRQSTSSAAT 60
           MDLLKQELLKKRQSLA  TGGKRFFKRSEIEQK+IQ+LRE+EKRELE K+ RQ+T  A T
Sbjct: 1   MDLLKQELLKKRQSLAEDTGGKRFFKRSEIEQKKIQKLREQEKRELEAKSQRQTT--APT 60

Query: 61  AEANSTSSKSNSLASASTTSSTTINSAATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQP 120
           A    +++ S++ ASA+TTSST     ATTSKS TDEQN+DNLVL +QEVIRRLR LK P
Sbjct: 61  ASTTKSNASSSATASATTTSST-----ATTSKSQTDEQNVDNLVLSKQEVIRRLRLLKHP 120

Query: 121 ITLFGEDDDTRLDRLKYVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQ 180
           ITLFGEDD++RLDRLKYVLKAGLFEVDSD+TEGQTNDFLRDIAELRKRQK+GILSERKRQ
Sbjct: 121 ITLFGEDDESRLDRLKYVLKAGLFEVDSDMTEGQTNDFLRDIAELRKRQKSGILSERKRQ 180

Query: 181 KKE-DGAGEEGEGGGADEE-SADGGSSGVDADKDLKRMKANFDELCQEDKILVFFKRLLN 240
           K + DG  E+GEGG A+EE SADGGSSGVDADKDLKRMKAN DELC EDKILVFFKRLLN
Sbjct: 181 KTDVDGVAEDGEGGVAEEELSADGGSSGVDADKDLKRMKANLDELCDEDKILVFFKRLLN 240

Query: 241 EWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKILPDDIRQALLVVVECC 300
           EWN+EL+EM E EKRTAKGKSMVATFKQCARYL+PLFKFCRKK+LPDDIRQALLVVVECC
Sbjct: 241 EWNEELNEMQETEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDIRQALLVVVECC 300

Query: 301 MERDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360
           M+RDYLAAMDQYIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS
Sbjct: 301 MKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS 360

Query: 361 IKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGWGKQGSDERLRIMHSPE 420
           IKRLMTFCQRRYPT+PSKAVEFNSLANGSDLQSLLAEERVSGG   Q  +ERLRIM +P 
Sbjct: 361 IKRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERVSGGSSSQAGEERLRIMPAPR 415

The following BLAST results are available for this feature:
BLAST of CmaCh08G003450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRP18_BOVIN1.4e-4534.72Pre-mRNA-splicing factor 18 OS=Bos taurus GN=PRPF18 PE=2 SV=1[more]
PRP18_PONAB3.5e-4435.23Pre-mRNA-splicing factor 18 OS=Pongo abelii GN=PRPF18 PE=2 SV=1[more]
PRP18_HUMAN1.3e-4334.72Pre-mRNA-splicing factor 18 OS=Homo sapiens GN=PRPF18 PE=1 SV=1[more]
PRP18_MOUSE1.7e-4334.72Pre-mRNA-splicing factor 18 OS=Mus musculus GN=Prpf18 PE=1 SV=1[more]
PRP18_DANRE2.2e-4333.76Pre-mRNA-splicing factor 18 OS=Danio rerio GN=prpf18 PE=2 SV=1[more]
BLAST of CmaCh08G003450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7C9_CUCSA2.7e-20593.11Uncharacterized protein OS=Cucumis sativus GN=Csa_7G388420 PE=4 SV=1[more]
A0A061DXM4_THECC2.9e-18384.36Splicing factor Prp18 family protein isoform 1 OS=Theobroma cacao GN=TCM_004356 ... [more]
W9R737_9ROSA2.5e-18283.89Pre-mRNA-splicing factor 18 OS=Morus notabilis GN=L484_025077 PE=4 SV=1[more]
A0A067JN48_JATCU5.5e-18284.09Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21921 PE=4 SV=1[more]
A0A061DPM4_THECC8.0e-18185.27Splicing factor Prp18 family protein isoform 2 (Fragment) OS=Theobroma cacao GN=... [more]
BLAST of CmaCh08G003450 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03140.16.1e-15670.99 splicing factor Prp18 family protein[more]
AT1G54590.12.0e-9063.10 INVOLVED IN: RNA splicing[more]
BLAST of CmaCh08G003450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100946|ref|XP_008451349.1|1.0e-20593.35PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo][more]
gi|449458490|ref|XP_004146980.1|3.9e-20593.11PREDICTED: pre-mRNA-splicing factor 18 [Cucumis sativus][more]
gi|1009148764|ref|XP_015892111.1|2.5e-18384.29PREDICTED: pre-mRNA-splicing factor 18 [Ziziphus jujuba][more]
gi|590717307|ref|XP_007050586.1|4.2e-18384.36Splicing factor Prp18 family protein isoform 1 [Theobroma cacao][more]
gi|703076739|ref|XP_010090411.1|3.6e-18283.89Pre-mRNA-splicing factor 18 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004098Prp18
IPR014906PRP4-like
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
cellular_component GO:0005681 spliceosomal complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G003450.1CmaCh08G003450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004098Prp18PFAMPF02840Prp18coord: 231..372
score: 2.8
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 110..137
score: 2.7
IPR014906Pre-mRNA processing factor 4 (PRP4)-likeSMARTSM00500pr04_2coord: 105..156
score: 9.6
IPR014906Pre-mRNA processing factor 4 (PRP4)-likeunknownSSF158230PRP4-likecoord: 98..140
score: 2.22
NoneNo IPR availableGENE3DG3DSA:1.20.940.10coord: 207..376
score: 2.0
NoneNo IPR availablePANTHERPTHR13007PRE-MRNA SPLICING FACTOR-RELATEDcoord: 1..394
score: 9.1E
NoneNo IPR availablePANTHERPTHR13007:SF19PRE-MRNA-SPLICING FACTOR 18coord: 1..394
score: 9.1E
NoneNo IPR availableunknownSSF47938Functional domain of the splicing factor Prp18coord: 206..372
score: 3.01

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G003450Cucsa.084450Cucumber (Gy14) v1cgycmaB0158
CmaCh08G003450Cla014767Watermelon (97103) v1cmawmB856
CmaCh08G003450Csa7G388420Cucumber (Chinese Long) v2cmacuB914
CmaCh08G003450MELO3C015826Melon (DHL92) v3.5.1cmameB825
CmaCh08G003450CSPI07G16300Wild cucumber (PI 183967)cmacpiB934
CmaCh08G003450CmoCh08G003420Cucurbita moschata (Rifu)cmacmoB913
CmaCh08G003450CmoCh17G011560Cucurbita moschata (Rifu)cmacmoB896
CmaCh08G003450Lsi02G022870Bottle gourd (USVL1VR-Ls)cmalsiB822
CmaCh08G003450MELO3C015826.2Melon (DHL92) v3.6.1cmamedB923
CmaCh08G003450CsaV3_7G028060Cucumber (Chinese Long) v3cmacucB1084
CmaCh08G003450Cla97C09G169700Watermelon (97103) v2cmawmbB940
CmaCh08G003450Bhi09G000901Wax gourdcmawgoB1121
CmaCh08G003450CsGy7G014800Cucumber (Gy14) v2cgybcmaB973
CmaCh08G003450Carg07253Silver-seed gourdcarcmaB0148
CmaCh08G003450Carg24883Silver-seed gourdcarcmaB0070
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh08G003450CmaCh17G011800Cucurbita maxima (Rimu)cmacmaB382
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G003450Cucumber (Chinese Long) v3cmacucB1051
CmaCh08G003450Watermelon (97103) v2cmawmbB929
CmaCh08G003450Wax gourdcmawgoB1114
CmaCh08G003450Cucurbita maxima (Rimu)cmacmaB465
CmaCh08G003450Cucurbita maxima (Rimu)cmacmaB555
CmaCh08G003450Cucurbita moschata (Rifu)cmacmoB914
CmaCh08G003450Watermelon (Charleston Gray)cmawcgB786
CmaCh08G003450Watermelon (Charleston Gray)cmawcgB813
CmaCh08G003450Watermelon (97103) v1cmawmB867
CmaCh08G003450Cucurbita pepo (Zucchini)cmacpeB902
CmaCh08G003450Cucurbita pepo (Zucchini)cmacpeB917
CmaCh08G003450Cucurbita pepo (Zucchini)cmacpeB918
CmaCh08G003450Bottle gourd (USVL1VR-Ls)cmalsiB816
CmaCh08G003450Bottle gourd (USVL1VR-Ls)cmalsiB841