Cucsa.077900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.077900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionBURP domain-containing protein 17
Locationscaffold00793 : 64258 .. 65265 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACAGTCCTTTAGGAGCATGTGAAGCAGAAGGACATCAACCTACAAGTGAATCCAACTTCTTCTCCCGGTTAAGGTATGAAACCCATTTTCCAACTATGGGTTCAATATTTTCAGACTTTTTTCCAAGGAAAAATAAATGAAGATTAGCAAAAGATCAAAATTTACAAAATTCATAATCAGATGCGACAATGCTTTTGCCTTGGTTGGTTTTATTTCTCACTACTTGTGCCAATAAACGCTCTAGTAATTGTTCTTTTGTGCCAATGATATATAGTTTATTGGGTTTAGGTACGATAGGGGTAATGATAGATGTACTAATCTAACTGAGATGTCCAAGTATACCTACCCGTCCCTCTTAGCAAACCCACTCTAAGTATTTTGTTAAAAAAAaTGTAAAAATAGCATTCTATAAGCTCAAATTTTAAAATATAACGATTGTCAAAAGAGGCATCAATATCAATTTTTCTTAGGCAAAAAAaTCTCATATAAATTAACTTTCACATTTTGCAGTTTGCTGAAGGAAGAATTGAATCTTCCATGAGCGAAATTGTTTAGAAGAGGAAACAAATTGAAATGAATGATTTTATTGAAGCAACATCAAGTACAGTACAAAATTCCATCATAAAAATGGTCACCACAATTAGAGATAATATTCAAACTTCCCAAGATGATGAATTTCCAATGAAGAACAATAATAATCATAATCACTCTTCTTCTTCATCTCATACGAATCACAATCTAAACTATTTACATAGTTTCCTTTACAGTCAATAACCTAAAATTAGTTGGGAAAAAaCACCCAATTTATTTCTCTAAAAGAGACCCTTCAAAATCCCCTCCATTTTTACCAAAAGAAAAAGCTGATCAAATTCCTTTCTCCTTCAAACAACTCCCACAAATCCTATCTTCTTTCTCTTTTCCTTCAAATTCTCCTCAAGCTCAAGCAGTCAAAGAAACCCTCCAACAATGTGAGCTGAAACCCATCAAAGGAGAGACCAAATTTT

mRNA sequence

ATGTACAGTCCTTTAGGAGCATGTGAAGCAGAAGGACATCAACCTACAAGTGAATCCAACTTCTTCTCCCGGTTAAGAGACCCTTCAAAATCCCCTCCATTTTTACCAAAAGAAAAAGCTGATCAAATTCCTTTCTCCTTCAAACAACTCCCACAAATCCTATCTTCTTTCTCTTTTCCTTCAAATTCTCCTCAAGCTCAAGCAGTCAAAGAAACCCTCCAACAATGTGAGCTGAAACCCATCAAAGGAGAGACCAAATTTT

Coding sequence (CDS)

ATGTACAGTCCTTTAGGAGCATGTGAAGCAGAAGGACATCAACCTACAAGTGAATCCAACTTCTTCTCCCGGTTAAGAGACCCTTCAAAATCCCCTCCATTTTTACCAAAAGAAAAAGCTGATCAAATTCCTTTCTCCTTCAAACAACTCCCACAAATCCTATCTTCTTTCTCTTTTCCTTCAAATTCTCCTCAAGCTCAAGCAGTCAAAGAAACCCTCCAACAATGTGAGCTGAAACCCATCAAAGGAGAGACCAAATTTT

Protein sequence

MYSPLGACEAEGHQPTSESNFFSRLRDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETKFX
Homology
[Close]
BLAST of Cucsa.077900 vs. Swiss-Prot
Match: BNM2C_BRANA (BURP domain-containing protein BNM2C OS=Brassica napus GN=BNM2C PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-10
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 1 

Query: 27  DPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 86
           D  K PP L +++AD IPFS   L  +L+ FS   +SPQ +A+KETLQ+C+ K I+GE K
Sbjct: 79  DLRKVPPLLTRQEADLIPFSESNLDFLLNHFSISKDSPQGEAMKETLQRCDFKAIEGEYK 138

Query: 87  F 88
           F
Sbjct: 139 F 139

[Close]
BLAST of Cucsa.077900 vs. Swiss-Prot
Match: BNM2A_BRANA (BURP domain-containing protein BNM2A OS=Brassica napus GN=BNM2A PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-09
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 1 

Query: 27  DPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 86
           D  K PP L +++AD IPFS   L  +L+ FS   +SPQ +A+KETL++C+ K I+GE K
Sbjct: 80  DLRKVPPLLTRQEADLIPFSESNLDFLLNHFSISKDSPQGKAMKETLKRCDFKAIEGEYK 139

Query: 87  F 88
           F
Sbjct: 140 F 140

[Close]
BLAST of Cucsa.077900 vs. Swiss-Prot
Match: USPL1_ARATH (BURP domain protein USPL1 OS=Arabidopsis thaliana GN=USPL1 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.4e-09
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 27  DPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 86
           D  K PP L +++AD IPF+  +L  +L  FS   +SPQ +A+KETL  C+ K I+GE K
Sbjct: 78  DLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSITKDSPQGKAIKETLGHCDAKAIEGEHK 137

Query: 87  F 88
           F
Sbjct: 138 F 138

[Close]
BLAST of Cucsa.077900 vs. Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.1e-08
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 1 

Query: 35  LPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 87
           LP+ +AD +PF+ ++LP+ILS  S P+ SP A A++ TL +CE  P  GE K
Sbjct: 54  LPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAK 105

[Close]
BLAST of Cucsa.077900 vs. Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.5e-07
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 1 

Query: 34  FLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 87
           FLP+ KAD IPFS K+LP+IL  F     S  A  +  TLQ CEL   KGE K
Sbjct: 392 FLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKK 444

[Close]
BLAST of Cucsa.077900 vs. TrEMBL
Match: A0A0A0K955_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259360 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-24
Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           RDPSKSPPFLPKEKADQI FSFKQLPQILSSF FPSNSPQAQAVKETLQQCELKPIK ET
Sbjct: 48  RDPSKSPPFLPKEKADQISFSFKQLPQILSSFHFPSNSPQAQAVKETLQQCELKPIKVET 107

Query: 86  KF 88
           KF
Sbjct: 108 KF 109

[Close]
BLAST of Cucsa.077900 vs. TrEMBL
Match: A0A097BU29_CITLA (BURP domain-containing protein 17 OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-23
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           RDPSKSPPFLPK+KAD IPFS KQLPQILS FSFPS+S QAQAVKETLQQCELKPIKGET
Sbjct: 125 RDPSKSPPFLPKQKADSIPFSLKQLPQILSYFSFPSDSHQAQAVKETLQQCELKPIKGET 184

Query: 86  KF 88
           KF
Sbjct: 185 KF 186

[Close]
BLAST of Cucsa.077900 vs. TrEMBL
Match: A0A068TZ23_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036598001 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.1e-15
Identity = 40/67 (59.70%), Postives = 54/67 (80.60%), Query Frame = 1 

Query: 21  FFSRLRDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKP 80
           +FS ++DPS+SPP L +E+AD IPFS  QLP++L  FSF  +SPQA+A+++TL  CE KP
Sbjct: 91  YFS-IKDPSRSPPLLSREEADSIPFSSSQLPKLLKLFSFSDDSPQAKAIEDTLHHCEYKP 150

Query: 81  IKGETKF 88
           IKGE+KF
Sbjct: 151 IKGESKF 156

[Close]
BLAST of Cucsa.077900 vs. TrEMBL
Match: A5BGD6_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_034298 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 9.3e-15
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1 

Query: 27  DPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 86
           DP+ SP  LPKE+AD IPFSF QLP +L  FSF   SPQA+A++ TL++C LKPIKGETK
Sbjct: 112 DPASSPRMLPKEEADSIPFSFAQLPHLLEFFSFSQGSPQARAMENTLRECXLKPIKGETK 171

Query: 87  F 88
           F
Sbjct: 172 F 172

[Close]
BLAST of Cucsa.077900 vs. TrEMBL
Match: V7ARI5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G024400g PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-14
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           RDPSKSP   PKE+AD +PFS KQLP +L  FSF  +SPQA A++ TL++CE KPIKGE 
Sbjct: 105 RDPSKSPKLWPKEEADSLPFSSKQLPYLLKLFSFSPHSPQATAIENTLRECESKPIKGEV 164

Query: 86  KF 88
           KF
Sbjct: 165 KF 166

[Close]
BLAST of Cucsa.077900 vs. TAIR10
Match: AT1G49320.1 (AT1G49320.1 unknown seed protein like 1)

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-10
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 1 

Query: 27  DPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETK 86
           D  K PP L +++AD IPF+  +L  +L  FS   +SPQ +A+KETL  C+ K I+GE K
Sbjct: 78  DLQKLPPLLTRQQADLIPFTKSKLDFLLDHFSITKDSPQGKAIKETLGHCDAKAIEGEHK 137

Query: 87  F 88
           F
Sbjct: 138 F 138

[Close]
BLAST of Cucsa.077900 vs. TAIR10
Match: AT5G25610.1 (AT5G25610.1 BURP domain-containing protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 18/54 (33.33%), Postives = 36/54 (66.67%), Query Frame = 1 

Query: 34  FLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETKF 88
           FLP+ +A+ +PF  ++  + L  FS  + S +A+ +K+T+++CE + + GE K+
Sbjct: 204 FLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKY 257

[Close]
BLAST of Cucsa.077900 vs. NCBI nr
Match: gi|778730353|ref|XP_011659764.1| (PREDICTED: LOW QUALITY PROTEIN: BURP domain-containing protein 6-like [Cucumis sativus])

HSP 1 Score: 166.8 bits (421), Expect = 1.7e-38
Identity = 87/112 (77.68%), Postives = 87/112 (77.68%), Query Frame = 1 

Query: 1   MYSPLGACEAEGHQPTSESNFFSRLR-------------------------DPSKSPPFL 60
           MYSPLGACEAEGHQPTSESNFFSRLR                         DPSKSPPFL
Sbjct: 1   MYSPLGACEAEGHQPTSESNFFSRLRYDRVSFTVNNLKLVGKKHPIYFSKRDPSKSPPFL 60

Query: 61  PKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETKF 88
           PKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETKF
Sbjct: 61  PKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGETKF 112

[Close]
BLAST of Cucsa.077900 vs. NCBI nr
Match: gi|659092391|ref|XP_008447041.1| (PREDICTED: BURP domain-containing protein 5-like [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET
Sbjct: 124 RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 183

Query: 86  KF 88
           KF
Sbjct: 184 KF 185

[Close]
BLAST of Cucsa.077900 vs. NCBI nr
Match: gi|700189103|gb|KGN44336.1| (hypothetical protein Csa_7G259360 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-24
Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           RDPSKSPPFLPKEKADQI FSFKQLPQILSSF FPSNSPQAQAVKETLQQCELKPIK ET
Sbjct: 48  RDPSKSPPFLPKEKADQISFSFKQLPQILSSFHFPSNSPQAQAVKETLQQCELKPIKVET 107

Query: 86  KF 88
           KF
Sbjct: 108 KF 109

[Close]
BLAST of Cucsa.077900 vs. NCBI nr
Match: gi|694188375|gb|AIS71928.1| (BURP domain-containing protein 17 [Citrullus lanatus])

HSP 1 Score: 115.5 bits (288), Expect = 4.6e-23
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           RDPSKSPPFLPK+KAD IPFS KQLPQILS FSFPS+S QAQAVKETLQQCELKPIKGET
Sbjct: 125 RDPSKSPPFLPKQKADSIPFSLKQLPQILSYFSFPSDSHQAQAVKETLQQCELKPIKGET 184

Query: 86  KF 88
           KF
Sbjct: 185 KF 186

[Close]
BLAST of Cucsa.077900 vs. NCBI nr
Match: gi|470126245|ref|XP_004299100.1| (PREDICTED: BURP domain-containing protein 3-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 40/62 (64.52%), Postives = 53/62 (85.48%), Query Frame = 1 

Query: 26  RDPSKSPPFLPKEKADQIPFSFKQLPQILSSFSFPSNSPQAQAVKETLQQCELKPIKGET 85
           R+PSKSP FLP+ +AD IPFS ++LP +L  FSF  NSPQA+A+++TL+QCE++PIKGET
Sbjct: 85  RNPSKSPRFLPRSEADSIPFSTEELPHLLEFFSFSKNSPQAKAMEDTLRQCEIEPIKGET 144

Query: 86  KF 88
           KF
Sbjct: 145 KF 146

The following BLAST results are available for this feature:
BLAST of Cucsa.077900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BNM2C_BRANA4.4e-1050.82BURP domain-containing protein BNM2C OS=Brassica napus GN=BNM2C PE=2 SV=1[more]
BNM2A_BRANA1.7e-0949.18BURP domain-containing protein BNM2A OS=Brassica napus GN=BNM2A PE=2 SV=1[more]
USPL1_ARATH6.4e-0947.54BURP domain protein USPL1 OS=Arabidopsis thaliana GN=USPL1 PE=2 SV=1[more]
BURP6_ORYSJ7.1e-0848.08BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 S... [more]
BURPH_ORYSJ3.5e-0752.83BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2... [more]
BLAST of Cucsa.077900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K955_CUCSA1.3e-2495.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G259360 PE=4 SV=1[more]
A0A097BU29_CITLA3.2e-2390.32BURP domain-containing protein 17 OS=Citrullus lanatus PE=2 SV=1[more]
A0A068TZ23_COFCA7.1e-1559.70Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036598001 PE=4 SV=1[more]
A5BGD6_VITVI9.3e-1565.57Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_034298 P... [more]
V7ARI5_PHAVU1.6e-1464.52Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G024400g PE=4 SV=1[more]
BLAST of Cucsa.077900 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49320.13.6e-1047.54 unknown seed protein like 1[more]
AT5G25610.12.4e-0633.33 BURP domain-containing protein[more]
BLAST of Cucsa.077900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730353|ref|XP_011659764.1|1.7e-3877.68PREDICTED: LOW QUALITY PROTEIN: BURP domain-containing protein 6-like [Cucumis s... [more]
gi|659092391|ref|XP_008447041.1|5.2e-27100.00PREDICTED: BURP domain-containing protein 5-like [Cucumis melo][more]
gi|700189103|gb|KGN44336.1|1.9e-2495.16hypothetical protein Csa_7G259360 [Cucumis sativus][more]
gi|694188375|gb|AIS71928.1|4.6e-2390.32BURP domain-containing protein 17 [Citrullus lanatus][more]
gi|470126245|ref|XP_004299100.1|1.6e-1564.52PREDICTED: BURP domain-containing protein 3-like [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004873BURP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.077900.1Cucsa.077900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004873BURP domainPFAMPF03181BURPcoord: 26..87
score: 4.5
IPR004873BURP domainPROFILEPS51277BURPcoord: 1..88
score: 19
NoneNo IPR availablePANTHERPTHR31236FAMILY NOT NAMEDcoord: 22..87
score: 5.0
NoneNo IPR availablePANTHERPTHR31236:SF4SUBFAMILY NOT NAMEDcoord: 22..87
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.077900Cucurbita pepo (Zucchini)cgycpeB0134
Cucsa.077900Bottle gourd (USVL1VR-Ls)cgylsiB081
Cucsa.077900Melon (DHL92) v3.6.1cgymedB082
Cucsa.077900Silver-seed gourdcarcgyB0093
Cucsa.077900Cucumber (Chinese Long) v3cgycucB080
Cucsa.077900Watermelon (97103) v2cgywmbB078
Cucsa.077900Wax gourdcgywgoB092
Cucsa.077900Cucurbita maxima (Rimu)cgycmaB0144
Cucsa.077900Cucurbita moschata (Rifu)cgycmoB0139
Cucsa.077900Wild cucumber (PI 183967)cgycpiB079
Cucsa.077900Cucumber (Chinese Long) v2cgycuB076
Cucsa.077900Melon (DHL92) v3.5.1cgymeB084
Cucsa.077900Watermelon (Charleston Gray)cgywcgB081
Cucsa.077900Watermelon (97103) v1cgywmB083