Cucsa.067570 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.067570
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ribosome biogenesis GTPase A
Location	scaffold00699 : 62082 .. 71336 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCGTGCAATTTTCCTTTGCGGCTTCCTTACCTTATCTGCGCTTGTACGAGTAATAATCTGTTCTAAAATGCTGGAATGAGTCTTCATCTTCTTCATATGGTTTAAGCATTGACGCTCACTACAACTGCAAGCAATGAGTCTTCATATTCATCCCTCAGGGTTCTTCCTCCCCAATACTCGCACAATCTACCCCCAGCTCTTTTTCTGCCGAAGCGGACCATCTCCACCATCTCTCGCCCCATCAGCCTCTGTTTCTTCGCCTCACCCCACAATTCAGGTAATACCACGAATTCAATTCTCCTTCCAAGCAGCATTTGGCTGCTACTTTTGTTTCTTTAATTTTAATCTCTTATACTGTTTACGACTATCACAATCGTTCTTGTTTCTACATCACTTGTGTTACTCTCATACCTCTCTATTAGCTTTTTATACAACTTACCTTTAGTAGTTATTGAATTTAGTTTTGAAATTTCATAATGTTTTAGATTGTTGGTGGTAAAACATCAAATTTCCTTGGAGATTCGACCCCCAAAGGTGCATCTAACAACGAACTACTTGAGGGTGATTGGGTTGATTTTGAAGCTGATCTGTATTACTGGACAAATGCATTACGTCCCGTTCAGGTATGATAAAATGCCTTCTGGTTTTGAAAATAGGGCAAGATTCTTGATGAATATGCTAAAGAATATATATATGTTCCCTCCACGTTTGGTGCTGATGTGCTGGCATCTCGGCAGTGGTATCCTGGGCATATAGCAAAAACAGAAAAAGAGCTGAAGGATCAACTAAAGCTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCATGTCGACAAGTCACCCGCAGGTTTTGCATTCAAGTTCTGATTTTGTTCATTTCCTTCATTATACTCTTGACTCGCCATTTTTTTTAATGTATGTATTATTGAAGTGTTTAGGAGATTTGACTCTTTTCAATTCTTAATTGGATTGTAACTATCGGTACCCTTACCCTTACTACATTGCCATTGACATGACGAAAAGCGTGGAGGCTGTAAGTTTTTTGGCTAAGGTCTGGGTGAGGTTGGGAAAAGGAAAGTTGGTGGGTTTGGGGAAAATTAGAACAGTGGCGTTTAGTAGATAATGAGATAGAGTGAACGAGGTGCTTGGCTGGGGTATTTGGTAGGTATTAGGATGAGGTCAGTATCGAAAGCTTGTCTGCTGAGTGGAGAAAGGAAGAGACCATGGCTGTGGTTTTTGTGTGGATAGAAGAGGTTTGTTTGTTGGAATGGTAAAGTTGAAGTGAATTTTGGGGTACCAATGCCTTGAACTGGAGGTGCGGTGAGAGGCAGATTTGCTAAAGGGCTTGAAAGAGACGGAGGACTTTGTGTTATTACCATAGTCGTGACTCTAGAGCTTTTGTTGGCAATTGAAGGACGAATTGCTAGAGGAAAACTCCACACTGGAGGAAGAAACTTTTTTTGATGCTGCTAGAATACCTTGAAGCTCTAATACCCAATTACAATAAAGAGAACACAGAAAGGAATATTTAATTTTTATTTTTTGAAACGGAGACAAAAGGAATATTGATGAAAAAGAGGAAGTTCTCTGCACACGTTGTCTGAGAGTAAAAGAATTCGTTTAAAGAAATGTATATCAATGTGTCGACTACTTACTAGATACAACAAACTAAAAAGGAAAAGAGGTCAAAACTATAAAGATGCACATAATTACCATGATAACAGGGAGTACGGTGAAAATTAAAAAAACTACAAATATAGCTTAACAACTTTTAGTGTTGCTTTAACTTGCCACATTTTAGTGTATCTACACTGATTTCTTTTACTTGCTTTAGTGCTTTATATTTCATTACTCAAAGATTATTTGACCACAATCTTTTCTTATATTTACAAATTTATTCATCATTTCCATGGTTAGATGGATGCATGGCTTGGTAATAGGAGAAGAATATTGGTATTGAATAGAGAAGATATGATATCTTCAGCGGACCGGAATGCTTGGGCAACTTATTTTACAAGACAGGGAATAAAAGTAGTGTTTTCAAATGGGCAGCATGGAATGGTATCTAAACAAGCATTATTCTCTTTCTAATCATGTGGAGTTTGACATTGTAATAGTCAATAATGTTTTCATGTTGCAACCTTAGGGCACAATGAAACTAGGGCGGTTGGCCAAGACATTAGCAGCAGATGTAAATGTCAAACGTAGAGCAAAGGGACTACTTCCTCGAGCGGTTTGTTGCATGAACTCACTCAATTCTAATGTTTAAGCTTGTTTTCAAGGTTTTTATATGTCAGAATTCTTTCTATGTCAAATCATCTGCATAGCATAAATGGTTTTTGTTCTATTTTGACACAACCAAAAGACATTTAGCCTTAAGCCTGAGCGAAGCATATTATTAGCTTTAACTGCTTAAGGCACCGTGTAGCAGCTAAAAATATTTTTCTGTGCTACAGCAATCAGTGAAAATCGTGGGGCTATCGGGCTATCTCGAGTTTATCCTTAATAGTAAATCAAAATTATTTTTAGAACTTGACTTACAACCTTAGTGATTATTGCATAGGTTCGTGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCGTCTTTGATCAACCGCTTGTTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCAGGTGTCACCAGAGAATTGAAGTATGATACTTTTGTTTTTTAATCTCAGTGTTAACTAAGACGTAAAAGCTGGCAATGTGGGAGAGAATTAGTTAAAAAGCCATTTTCATTCCCAGTAGGGTTCAGTGAAATCTATGATTAACCGTCTCCTTATTTTCATTCTGTCGTAAAAGGTGGGTTCGTTTTGGCAACGATCTTGAGTTGCTTGATTCTCCTGGTATCATACCAATGCGGATTAGTGACCAGACAGCTGCAATAAAGCTTGCTATATGCGATGACATTGGAGAGAGGTCCTACAATGCTGCTGATGTTGCTGCCATTCTTGTACAGATTCTGACCAAGCTCCCATCAGTAGGTACCATGGAAATACTTTGATCTCTTGAAAATTTACGGAGTACTAGTAACTCTCTTGGTGGGACTGGCATATTTCCTGCACTACTATGATAGACCCCTATCATCCACCAATATACTAGACGAGGGAAGAAGAATTAAGTAGGCACATGTGAATATTAGTGTAGGCACGTGTGAGTTGTTAGGGTAAATAGTTAGGATATGTTTTATAAACAGGTTTGAATTATTGGAGGGAAGGGCAGTTAGGTTGAGATTTGAGTCTGGAATCCGTGCACCTTCGAGAGAGAACGTAACAAAGAGATTGTAACCGAATTGAGATTTCTCAATTCGTTTCTTTTATTATTTTACTTTGACCTTGTACTCGATTTCTTTTCATTTATCAATAAAAGTTCCATTGATAGAACACAATCGTAGTGTTCCATCCTATTGGTATAAGAGCGGTCGATTTAAGGAAGAAACGATTTAATGATGGTTCAGACGCGTATGGAAGAAAAATTGGAAGCGTATGATCACGAGATGATTGGTGTAAAGAAGTAACTAAGCTAGTTGCCGGCGATGGAGGAGAAGCCGACGTTGATTACGACAACATTGGAGAATTTGAGTGTGCAGTCAGACAAAAATCAGCAGATGATGATGTTGTTTGTGGAAACAATGGCAAAGGAACGAACGGCCACAAGAGAGAGAAAGACCGAGCCAAGTGTGCGCAACACCAGTGAAGGCCAAGGTAGGAGAAGGAACATCCGACAAGGGGATCAGCGATGAAACACCAGAAGGCAGAACTGAATGCGAAGGTAATACAGAACGCCATAAGTTTAAAAAAGTGGAGATGTCTGTCTTCAATGGTGAAGATCCTGATTCTTGGTTATTCTGAGCCGATAGATACTTCCAAATTCATAAATTGTTGATGCCGAGAAGGTATTGGTGACGACGATCAGTTTTGAGGGTTCAACCTTGAACTGGTACAGAGCACAAGAAGAGAGGGATAAATTTATGGATTGTTCGAACTTGAAGAAATGATTGCTGATACGATTCTAATCAGTTCGCAAAGGACCCATATGTGGCCAATTTTTTAGAATTTGGCAAGAGACTACAGTAGAGGAATATCAAAATTTGTTTGACAAATTAATGGCTCCATTATCGGATTTACAGGACAGGGTGATTGAGGAAACTTTCATGAATGGGTTGCTGTCATGGATCAAGGCTGAGGTAGATTTTTGTCGACCAACCAGATTAGCCCAGATGATGCAATTAGCTCAGTTGGTGGAGAATCGGGAGATCGTCCGGGCGTAAGTCAACCTTAAAGGATATGTTGGAGGAAAATATCCAACTTCTTTAGCCAATAGTGCTAAATCTGGAGGGAGTGCCAATTCAATTGATAATAAGAGCGACTCTACAATTCCCATGAGAACTATCACCTTAAGAGGGGTGGCTGGTGGGGAAGCTAAGAAGGAGGGGCCTAGTAAGAGATTATCTGACATGGAGTTTCGAGCTAGAAAGGAGAAGGCACTCTATTTTCGATGTAACGAAAAGTACTCCCATGACCATAAATGTAAGATGAGGGAGCAAAGAGAGCTTCGAATGTATGTTGTCACAGAGGGAAAGGAGGAATTTGAGATTGTGGAGGATATGGAGAGTGAGGAGAAAGAATTGAAAATGGTGAGGATAGATGAGGAAGACCAAGCCATTATAGAATTATCCATTAATTTTGTGGTAGGATTATCGAACCCGGGTACTATGAAGGTGAGAGGGGAGATCGAAGGCAAGGAAGTGGTGATCTTAGTAGATTGTGGGGCTATACACAACTTTATCTTTGAAAAGTTGGTGAAGAGTTTACAGATACCGACGAAAGACACTTCTCATTATGGGGTGATTTTGGGGTCCGACACAACTATTAAGGGGAAAGGAATCTGTGAAGCCGTAGAGTTGAAAATGAATGATTGGAAGGTAGTAGCGAACTTTTTACCGTTGGAGTTAGGGGGTGTGGACGTGGTCTTAGAGATGCAGTGGCTTTACTCTCTTGGCATCACATAAGTAGATTGGTGAAATTTGACTATGACTTTTATGCACCATGGCAGAAAGGTAATCATTAAGGGTGATCCTAGTTTAACTAAAACTAGAGTAAGTTTGAAGACCATGATGAAAACTTGGGAAGGGCCTGACCAAGACTTTCTGGTGGAATGTCGAGCCATGGAGTGGGATACATCTTCGGCCGAAGGAGGAGAGTTAGAAGAGGTGTTGACTGTAGGAGAATCAGTGACGGTGGTTTTGAAGAAATTCGAAGATGTCTTTACTTAACCTGACCAATTACCATCAGAGAGGAGTATCAAACATCATATACATTTGAAACAGGGGACTGAACCAGTGAATGTAAGACCGTATAGGTATGCTTTTCAGCAAAAGGCAGAAATGGAGAGATTAGTGGATGAGATGTTAGCATTGGGGATTATTCGCCCAAGTCAGCCCTTATTCCAGCCTAATTATGTTGGTTAGGAAGAAGGATGGGAGTTGGCGCTTTTGTGTGGACTACCGAGCGTTGAATAACGTTACTATACCGGACAAATTTCCACTACCGGTAATTGAGGAGCTCTTTGATGAACTAAATGGTGGCTACATGGTTTTCTAAGATTGATTTGAATGTCGGATTCCACCAAATTTGTATCTGTGGGAAAGACATTAAGAAGACAGCATTTAGAACTCATGAAGGCCATTATGAGTTCATGGTGATGCCATTCGGCCTAACTAATGCACCCTCACATTTCAGTCACCGATGAATTCTATATCCAAGCCATATTTGAGAAAATTTGTTCTGGTATTCTTTGATGACATCCTAATTTACATCAAGGATTTTGAAGAACATCTATCACATTTGGAGAAGGCTTTAGAAGTGCTACGAAAAAATGAGCTTTATGCAAACCAGAAGAAATGCAGTTTTGCACAGACACGTGTAGATTACTTGGGGACAAGGAGTTGAGGTTGATTCTGAGAAGATTAGAGCAATCAAGGAATGCATACCTAAGAATATTCGGGAAGTCCGAGGCTTCTTGGGATTGATGGGGTACTATAGAAAATTTGTCCAACACTATGGGTCTATTGCCGCGCCTCTAACTCAACTACTTAAGAATGGTGGATTTAGGTGGAACAAGGAGTCCCTTGAAGCATTCCAGAAGTTGCAAAATGCTATGATGACTCTTCCTGTTTTAGCTTTGCCTGATTTCGATGCCCCATTTGAAATGGAGACTGATGCATCCGGTTATGGCATAGGAGCAGTGCTCATTCAATCCAAACGCCCTATTGCTTTCTTCAGCCACACATTAGCTATGAGAGATCAGGTTAAACCAGTGTATGAAAGAGAGCTTAGGGCAATTGTCCTCGTCGTGCAGAGATGGAGACCGTATTTGCTAGGAAGGGAGTTTATAGTGAAGACAGATCAACGTTCCCTAAAGTTCTTATTGGAATAGAGGGTTATTCAGCCACAATACCGAAGTGCATTGCTAAGCTTTTGGGATATTCCTTCGAGGTGGTATACAAACTAGGATTGGAGAACAAGGCGGTAGAAGCTCTATCCAGAATGCCTCCAGTTGTCCATCTTTGTAATATTACAGCCCCCACCTTGATTGATTTGAAGACCATCAAAGAAGAAGTGGAAAACGATGATCGGCTGAAGCTGATAATGAAAGAAACGGTAGGAGAGGATGGCAAGGCAAACAAGTATTCCATTCAGCAGGGGATGTTGAGGTATAAAGGTAGGCTGGTTCTTTCCAAGTCTTCGGCATTGATTCCAACAATTCTCTACACCTACCATGACTTTGTGTTTGGGGGACATTTTGGGTTCCTTAGAACTTATAAACGAGTGGTTGGGGAGTTGTATTGGGAGGGTATGAAACTTGATGTGCATAAATATTCCGAAGAGTGTCTGATCTGTCAGAAAAATAAAGCAATGGCCTTGTCACCTGCATGGTTGTTGTTACCCTTAGAAATACCTAATAGTGTGTGGAGCGACATTTGTGTGGATTTCGTGGAGGGACTACCAAAGTCTAATGGATATGAGGTGTTTTCGTGGTGGTGGATAGATTTAGCAAGTATGGACATTTTAATACCCTTGAAACATCCCTATACCACCTAGTCCGTGTCTGATCTGTTTGTGAAGGAAGTTGTCAGACTACATGGATATCCTAAATCCAAAGTGTCGGATAGAGATTAGGTTTTCTTGAGTGGTTTTTGGAAGGAGCTGTTTAGGTTGGCTGGTACTCAGCTGAATCGTAGTTCAGCCTATCATCCTCAATCAGACGTTCAAACTGAAGTGGTCAATAGAGGAGTGGAGACATACCTTCGCTGTTTTTGTGGAGAGCGGCCGAAGAAGTGGATAGAATGGTTGCATTGGGCAGAGTACTGGTATAACACCACGTACCAGAGATCCTTAGGGGTAACCCTCTTTCAAGCTGTCTACGAGACTCTACGTCCACCCTTGGTGTATTATGGTGATCGAGACATCCCTAATTCAGCATTAGATGAGCACTACTCAAGGAGAGGGATATTATGTTGGGAGCATTGGAGGAACACTTGCAGATAGCCCAAGAGAAGATGAAGAAAAAGGCTGACCTAAAGAGAAGGGATGTGGAATACATGGTAGGGGATTTGGTCTTTCTTAAAATTCGACCATACAGGCAGGTTTCCTTGTGGAAGAAAAGAAATGAGAAGTTGTCCTCAAAGTTTTTTGGTCCTTATAAGATCATAGAAGAACGGACTGGCCCAGTTGCATACTAGTTGGAGCTGCCAAAGACATCATCCATTAATCCTGTTTTTCATGTTTCTCAATTGAAGAAGATGCTGGGAAATCATCAAGTTGAGCCGACGGATATGCCCTATATGATCGAGACTCACGAATGGCGTGCAGTGCTGGACGAGACTTATGGCTACTTGAAAAATAAGAGTGGAGGATGGGACGGACGTGCTGATCAGTTGGAAGGGCTTTATCTAGACACGAGGCTACATGGGAAGACTACGAAGAAATGCAGAGGCTGTTTCCAGAAATTCACCTTGAGGACAAGGTAAATTTGGAGAAGGAATGTAATGATAGACCCCTATCATCCACCAATATAGTAGACAAGGAAAGAAGAATTAAGTAGGCATGTGTGAGTTTGTTAGTGTAAGTAGTTAGGATATGTTTTATAAATAGGTTTGAATTATTTGAGGGAAGAACAGTTAGGTTTTTGAGATTTGAGTCTGAAATCTGTGTCACCTTTGAAAGAGAAGGTAACAGAGAGATTGTACCCGAATTGAGATTTCTCAATTCGTTTCTTTTATTATTTTACTTTGACCTTGTACTCGATTTCTTTTCATTTATCAATAAAAGTTCCACTGGTAGAACACAATCTCATACTACTTAATCAAATCATTTATATTCAAGCTTGATGAAAAACTGCCACGTTTCAGGATGTTCACTTTTTTACCTGCTGAAATGGTATGTTTCATAATTTTGATGAATGACATTAGCTTTTGGGAATCTCCAGGTATAGAAACACTTCAAAAGCGGTACAAAGTTGATGCAGGCGGTCAGTGTGGTCAAATGTACGTTATCATATGCTGATCAATAGTTTTCCATTTCTAGTTCGGTATTACTAATATATGTGTGAAGCATCCAGATTTCTAGATGAGAAAAACTCTACCTCTCTTTACTCCCATTCCACCTTGGGTTACATTCTTTCTTTTGCCCAGTAGATGGAATCTATTTATGAAAAACGAGTGCATATTTGCAGTCTAAAATAATTCCTAACAAATTGCTGTAACAGATTTGTTCAAAAGTTAGCCCTCCAATTGTTCAACGGGGACAATCATCAAGCAGCTTTTCGCATCTTATCGGATTTTCGCAAAGGAAAGTTTGGTTGGACTGCTTTGGAGAGGCCTCCCAGGTAATGCTGTTGGATGATGGTTTGCTTGAAGGTCAGAATTTGAGCTTCTCGCTCTTACACTAGTTGTACAGATTCTAAAGGCCACTCTCAAACTGAGAAATGAAATTCACGATGCTTATATTGCTTTCGACTTGCGGACTTGTGGGAAGCTCAAAATTGGAGACCTTGATCATAAATGGTAATGAATCTCATTAATTTGTGAAGCCATTGTGATCATGTATTATATGCTTTTACATCACTCATGTAATTAAAACAATCGTTTTGGTTAACCTACAATTGTATCCCAAATGAAATTCGTAGTTCTTTACTATTAATATCTTTATCATA

mRNA sequence

TTATCGTGCAATTTTCCTTTGCGGCTTCCTTACCTTATCTGCGCTTGTACGAGTAATAATCTGTTCTAAAATGCTGGAATGAGTCTTCATCTTCTTCATATGGTTTAAGCATTGACGCTCACTACAACTGCAAGCAATGAGTCTTCATATTCATCCCTCAGGGTTCTTCCTCCCCAATACTCGCACAATCTACCCCCAGCTCTTTTTCTGCCGAAGCGGACCATCTCCACCATCTCTCGCCCCATCAGCCTCTGTTTCTTCGCCTCACCCCACAATTCAGATTGTTGGTGGTAAAACATCAAATTTCCTTGGAGATTCGACCCCCAAAGGTGCATCTAACAACGAACTACTTGAGGGTGATTGGGTTGATTTTGAAGCTGATCTGTATTACTGGACAAATGCATTACGTCCCGTTCAGTGGTATCCTGGGCATATAGCAAAAACAGAAAAAGAGCTGAAGGATCAACTAAAGCTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCATGTCGACAAGTCACCCGCAGATGGATGCATGGCTTGGTAATAGGAGAAGAATATTGGTATTGAATAGAGAAGATATGATATCTTCAGCGGACCGGAATGCTTGGGCAACTTATTTTACAAGACAGGGAATAAAAGTAGTGTTTTCAAATGGGCAGCATGGAATGGGCACAATGAAACTAGGGCGGTTGGCCAAGACATTAGCAGCAGATGTAAATGTCAAACGTAGAGCAAAGGGACTACTTCCTCGAGCGGTTCGTGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCGTCTTTGATCAACCGCTTGTTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCAGGTGTCACCAGAGAATTGAAGTGGGTTCGTTTTGGCAACGATCTTGAGTTGCTTGATTCTCCTGGTATCATACCAATGCGGATTAGTGACCAGACAGCTGCAATAAAGCTTGCTATATGCGATGACATTGGAGAGAGGTCCTACAATGCTGCTGATGTTGCTGCCATTCTTGTACAGATTCTGACCAAGCTCCCATCAGTAGGTATAGAAACACTTCAAAAGCGGTACAAAGTTGATGCAGGCGGTCAGTGTGGTCAAATATTTGTTCAAAAGTTAGCCCTCCAATTGTTCAACGGGGACAATCATCAAGCAGCTTTTCGCATCTTATCGGATTTTCGCAAAGGAAAGTTTGGTTGGACTGCTTTGGAGAGGCCTCCCAGGTAATGCTGTTGGATGATGGTTTGCTTGAAGGTCAGAATTTGAGCTTCTCGCTCTTACACTAGTTGTACAGATTCTAAAGGCCACTCTCAAACTGAGAAATGAAATTCACGATGCTTATATTGCTTTCGACTTGCGGACTTGTGGGAAGCTCAAAATTGGAGACCTTGATCATAAATGGTAATGAATCTCATTAATTTGTGAAGCCATTGTGATCATGTATTATATGCTTTTACATCACTCATGTAATTAAAACAATCGTTTTGGTTAACCTACAATTGTATCCCAAATGAAATTCGTAGTTCTTTACTATTAATATCTTTATCATA

Coding sequence (CDS)

ATGAGTCTTCATATTCATCCCTCAGGGTTCTTCCTCCCCAATACTCGCACAATCTACCCCCAGCTCTTTTTCTGCCGAAGCGGACCATCTCCACCATCTCTCGCCCCATCAGCCTCTGTTTCTTCGCCTCACCCCACAATTCAGATTGTTGGTGGTAAAACATCAAATTTCCTTGGAGATTCGACCCCCAAAGGTGCATCTAACAACGAACTACTTGAGGGTGATTGGGTTGATTTTGAAGCTGATCTGTATTACTGGACAAATGCATTACGTCCCGTTCAGTGGTATCCTGGGCATATAGCAAAAACAGAAAAAGAGCTGAAGGATCAACTAAAGCTGATGGATGTTGTGATAGAGGTTCGAGATGCTAGAATACCCATGTCGACAAGTCACCCGCAGATGGATGCATGGCTTGGTAATAGGAGAAGAATATTGGTATTGAATAGAGAAGATATGATATCTTCAGCGGACCGGAATGCTTGGGCAACTTATTTTACAAGACAGGGAATAAAAGTAGTGTTTTCAAATGGGCAGCATGGAATGGGCACAATGAAACTAGGGCGGTTGGCCAAGACATTAGCAGCAGATGTAAATGTCAAACGTAGAGCAAAGGGACTACTTCCTCGAGCGGTTCGTGCTGGAATAGTTGGATATCCTAATGTTGGAAAATCGTCTTTGATCAACCGCTTGTTGAAACGACGAATGTGTCCAGCAGCTCCAAGACCAGGTGTCACCAGAGAATTGAAGTGGGTTCGTTTTGGCAACGATCTTGAGTTGCTTGATTCTCCTGGTATCATACCAATGCGGATTAGTGACCAGACAGCTGCAATAAAGCTTGCTATATGCGATGACATTGGAGAGAGGTCCTACAATGCTGCTGATGTTGCTGCCATTCTTGTACAGATTCTGACCAAGCTCCCATCAGTAGGTATAGAAACACTTCAAAAGCGGTACAAAGTTGATGCAGGCGGTCAGTGTGGTCAAATATTTGTTCAAAAGTTAGCCCTCCAATTGTTCAACGGGGACAATCATCAAGCAGCTTTTCGCATCTTATCGGATTTTCGCAAAGGAAAGTTTGGTTGGACTGCTTTGGAGAGGCCTCCCAGGTAA

Protein sequence

MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGDSTPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPPR*

Homology

[Close]

BLAST of Cucsa.067570 vs. Swiss-Prot
Match: DGP3_ARATH (DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana GN=DGP3 PE=2 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 6.0e-133
Identity = 236/338 (69.82%), Postives = 277/338 (81.95%), Query Frame = 1


Query: 36  PSASVSSPHPTIQIVGGKTSNFLGDSTPKGASNNELLEG-----DWVDFEADLYYWTNAL 95
           P+A+ S P P IQIVGGK  N   D T K  S    LE      DW++ E+D+  WT AL
Sbjct: 37  PTANSSRP-PPIQIVGGKDLNL--DVTRKDDSIGFKLEANEDEIDWMNLESDIRLWTRAL 96

Query: 96  RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNRE 155
           RPVQWYPGHI KTEKEL++QLKLMDVVIEVRDARIP+ST+HP+MDAWLGNR+RILVLNRE
Sbjct: 97  RPVQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNRE 156

Query: 156 DMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRA 215
           DMIS+ DRN WA YF +QGIKV+F+NG+ GMG MKLGRLAK+LA DVN KRR KGLLPR+
Sbjct: 157 DMISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRS 216

Query: 216 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRI 275
           VRAGI+GYPNVGKSSLINRLLKR++C AAPRPGVTRE+KWV+ G DL+LLDSPG++PMRI
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRI 276

Query: 276 SDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVDAGGQCGQIF 335
            DQ AAIKLAICDDIGE++Y+  DVA ILVQ+L ++P VG + L  RYK+   G CG+ F
Sbjct: 277 DDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQLEGNCGKKF 336

Query: 336 VQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP 369
           V+ L L LF GD+HQAAFRIL+DFRKGKFG+ +LERPP
Sbjct: 337 VKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPP 371

[Close]

BLAST of Cucsa.067570 vs. Swiss-Prot
Match: RBGA_BACLD (Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=rbgA PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-44
Identity = 105/281 (37.37%), Postives = 161/281 (57.30%), Query Frame = 1


Query: 93  VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK  +E+ ++LKL+D+V E+ DARIPMS+ +P ++  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 153 ISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
             S+   AW  +F + GI  +  N  +G G  ++   +K L  +   K +AKG+ PRA+R
Sbjct: 63  ADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIR 122

Query: 213 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISD 272
           A IVG PNVGKS+LINRL K+ +     RPGVT   +WV+ G +LELLD+PGI+  +  D
Sbjct: 123 ALIVGIPNVGKSTLINRLAKKNIAKTGDRPGVTTAQQWVKVGKELELLDTPGILWPKFED 182

Query: 273 QTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKV-----DAGGQCG 332
           +   ++LA    I +   N  DVA   ++ L +      E L+KRY +     +      
Sbjct: 183 ELVGLRLAATGAIKDSIINLQDVAVYGLRFLEENYP---ERLKKRYDLEEIPEEIAALFD 242

Query: 333 QIFVQKLALQLFNGDNHQAAFR-ILSDFRKGKFGWTALERP 368
           +I  ++  L      N+      I+ D R  KFG  + E+P
Sbjct: 243 EIGKKRGCLMAGGEINYDKTTEVIIRDIRTEKFGPLSFEKP 280

[Close]

BLAST of Cucsa.067570 vs. Swiss-Prot
Match: RBGA_BACPZ (Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) GN=rbgA PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-44
Identity = 102/281 (36.30%), Postives = 164/281 (58.36%), Query Frame = 1


Query: 93  VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK  +E+ ++LKL+D+V E+ DARIPMS+ +P ++  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 153 ISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
             +A    W  +F  QGI+ +  N  +G G  ++   +K +  +   + RAKG+ PRA+R
Sbjct: 63  ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122

Query: 213 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISD 272
           A I+G PNVGKS+LINRL K+ +     RPG+T   +WV+ G +LELLD+PGI+  +  D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182

Query: 273 QTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVD-AGGQCGQIF- 332
           +   ++LA+   I +   N  DVA   ++ L +      E L++RY +D       ++F 
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYP---ERLKERYALDEIPEDIAELFD 242

Query: 333 --VQKLALQLFNG--DNHQAAFRILSDFRKGKFGWTALERP 368
              +K    +  G  +  +    I+ D R  KFG  + E+P
Sbjct: 243 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280

[Close]

BLAST of Cucsa.067570 vs. Swiss-Prot
Match: RBGA_BACSU (Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168) GN=rbgA PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-44
Identity = 102/281 (36.30%), Postives = 164/281 (58.36%), Query Frame = 1


Query: 93  VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK  +E+ ++LKL+D+V E+ DARIPMS+ +P ++  L N+ RI++LN+ D 
Sbjct: 3   IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62

Query: 153 ISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
             +A    W  +F  QGI+ +  N  +G G  ++   +K +  +   + RAKG+ PRA+R
Sbjct: 63  ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122

Query: 213 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISD 272
           A I+G PNVGKS+LINRL K+ +     RPG+T   +WV+ G +LELLD+PGI+  +  D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182

Query: 273 QTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVD-AGGQCGQIF- 332
           +   ++LA+   I +   N  DVA   ++ L +      E L++RY +D       ++F 
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYP---ERLKERYGLDEIPEDIAELFD 242

Query: 333 --VQKLALQLFNG--DNHQAAFRILSDFRKGKFGWTALERP 368
              +K    +  G  +  +    I+ D R  KFG  + E+P
Sbjct: 243 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280

[Close]

BLAST of Cucsa.067570 vs. Swiss-Prot
Match: RBGA_GEOSW (Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) GN=rbgA PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.2e-44
Identity = 107/282 (37.94%), Postives = 161/282 (57.09%), Query Frame = 1


Query: 93  VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           +QW+PGH+AK ++E++++LKL+D+V E+ DARIP+S+ +P +   LGN+ RI++LN+ DM
Sbjct: 5   IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADM 64

Query: 153 ISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLL-PRAV 212
                   W  YF RQ +  +  + Q G G  ++   AK +  D   K  AKG+  PR +
Sbjct: 65  ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPM 124

Query: 213 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRIS 272
           RA IVG PNVGKS+LINRL  R +     +PGVT+  +W++ G ++ELLD+PGI+  +  
Sbjct: 125 RALIVGIPNVGKSTLINRLAGRNIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 184

Query: 273 DQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKV-DAGGQCGQIF 332
           D+   +KLA    I +   N  DVA   V  L  L     E L++RY + D  G+   +F
Sbjct: 185 DEEVGLKLATTGAIKDTILNLQDVA---VYALNFLKQHYPERLKERYSLDDIPGEIVALF 244

Query: 333 --VQKLALQLFNG---DNHQAAFRILSDFRKGKFGWTALERP 368
             + K    L +G   D  + +  +L D R  K G  + E P
Sbjct: 245 DAIGKRRGCLVSGGAVDYDKVSEIVLHDIRTEKLGRLSFETP 283

[Close]

BLAST of Cucsa.067570 vs. TrEMBL
Match: A0A0A0KMJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G308800 PE=4 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 1.0e-176
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1


Query: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60
           MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD
Sbjct: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120
           STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV
Sbjct: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180

Query: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300
           RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

Query: 301 QILTKLPSVG 311
           QILTKLPSVG
Sbjct: 301 QILTKLPSVG 310

[Close]

BLAST of Cucsa.067570 vs. TrEMBL
Match: A0A059A828_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03362 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 1.4e-157
Identity = 280/364 (76.92%), Postives = 309/364 (84.89%), Query Frame = 1


Query: 8   SGFFLPNTRTIYPQLFFCRSGPS--PPSLAPSASVSSPHPTIQIVGGKTSNFLGDSTPKG 67
           S   LPN+ ++      CR+ PS  PP+  PS S SSP P+ QIVGG+ S + G    + 
Sbjct: 6   SSLCLPNSPSLPFNFSLCRARPSLAPPAATPSLSSSSPSPSFQIVGGRNSGWRGTGVAQF 65

Query: 68  ASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARI 127
             + E  E DW+D +ADL +WT  LR VQWYPGHIAKTEKELK+QLKLMDVV+EVRDARI
Sbjct: 66  GGDEE--EADWLDLDADLCHWTKGLRTVQWYPGHIAKTEKELKEQLKLMDVVVEVRDARI 125

Query: 128 PMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMK 187
           P+ST+HP MD+WLG R+RILVLNREDMIS ADRNAWATYFT+QGIKV+F+NGQ GMGTMK
Sbjct: 126 PLSTTHPLMDSWLGTRKRILVLNREDMISKADRNAWATYFTKQGIKVIFANGQLGMGTMK 185

Query: 188 LGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 247
           LGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT
Sbjct: 186 LGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 245

Query: 248 RELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTK 307
           RELKWV FG DLELLDSPGIIPMRISDQ AAIKLAICDDIGE+SYN ADVAAILVQ+LT+
Sbjct: 246 RELKWVHFGKDLELLDSPGIIPMRISDQVAAIKLAICDDIGEKSYNVADVAAILVQMLTR 305

Query: 308 LPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALE 367
           LP+VG+  LQ RYK+D  G CG IFVQK+ALQLFNGD HQAAFRILSDFRKGKFGW ALE
Sbjct: 306 LPAVGVGVLQNRYKIDVDGHCGDIFVQKVALQLFNGDIHQAAFRILSDFRKGKFGWVALE 365

Query: 368 RPPR 370
           RPPR
Sbjct: 366 RPPR 367

[Close]

BLAST of Cucsa.067570 vs. TrEMBL
Match: A0A059A972_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03362 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 3.5e-156
Identity = 280/365 (76.71%), Postives = 309/365 (84.66%), Query Frame = 1


Query: 8   SGFFLPNTRTIYPQLFFCRSGPS--PPSLAPSASVSSPHPTIQIVGGKTSNFLGDSTPKG 67
           S   LPN+ ++      CR+ PS  PP+  PS S SSP P+ QIVGG+ S + G    + 
Sbjct: 6   SSLCLPNSPSLPFNFSLCRARPSLAPPAATPSLSSSSPSPSFQIVGGRNSGWRGTGVAQF 65

Query: 68  ASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARI 127
             + E  E DW+D +ADL +WT  LR VQWYPGHIAKTEKELK+QLKLMDVV+EVRDARI
Sbjct: 66  GGDEE--EADWLDLDADLCHWTKGLRTVQWYPGHIAKTEKELKEQLKLMDVVVEVRDARI 125

Query: 128 PMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMK 187
           P+ST+HP MD+WLG R+RILVLNREDMIS ADRNAWATYFT+QGIKV+F+NGQ GMGTMK
Sbjct: 126 PLSTTHPLMDSWLGTRKRILVLNREDMISKADRNAWATYFTKQGIKVIFANGQLGMGTMK 185

Query: 188 LGRLAKTLAADVNVKRRAKGLLPRA-VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGV 247
           LGRLAKTLAADVNVKRRAKGLLPRA VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGV
Sbjct: 186 LGRLAKTLAADVNVKRRAKGLLPRAQVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGV 245

Query: 248 TRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILT 307
           TRELKWV FG DLELLDSPGIIPMRISDQ AAIKLAICDDIGE+SYN ADVAAILVQ+LT
Sbjct: 246 TRELKWVHFGKDLELLDSPGIIPMRISDQVAAIKLAICDDIGEKSYNVADVAAILVQMLT 305

Query: 308 KLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTAL 367
           +LP+VG+  LQ RYK+D  G CG IFVQK+ALQLFNGD HQAAFRILSDFRKGKFGW AL
Sbjct: 306 RLPAVGVGVLQNRYKIDVDGHCGDIFVQKVALQLFNGDIHQAAFRILSDFRKGKFGWVAL 365

Query: 368 ERPPR 370
           ERPPR
Sbjct: 366 ERPPR 368

[Close]

BLAST of Cucsa.067570 vs. TrEMBL
Match: A9PEM5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23150g PE=2 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.2e-153
Identity = 282/363 (77.69%), Postives = 304/363 (83.75%), Query Frame = 1


Query: 9   GFFLPNTRTIYPQLFFCR-SGPSPPSLAPSASVSSPHPTIQIVGGK-TSNFLGDSTPKGA 68
           G +LPN    + +  F   S P+  SL   AS+SSP PTIQIVGGK T ++ G       
Sbjct: 7   GLWLPNPAIRFNRPPFLHLSPPTRASLVTPASLSSPPPTIQIVGGKSTPSWQGSGNDVCG 66

Query: 69  SNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIP 128
              E  E DW DFE DLY+WT  LRPVQWYPGHIAKTEKELK+QLKLMDVVIEVRDARIP
Sbjct: 67  GGGE--ETDWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIP 126

Query: 129 MSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKL 188
           +ST+HPQMDAWLGNR+RILVLNREDMIS ADRNAWATYF RQGIKVV SNGQ GMGTMKL
Sbjct: 127 LSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVVLSNGQLGMGTMKL 186

Query: 189 GRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR 248
            R AK+LAA VNVKRR KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR
Sbjct: 187 SRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR 246

Query: 249 ELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKL 308
           EL+WVRFGNDLELLDSPGIIPMRISDQ+AAIKLAICDDIGERSY+  DVAAILVQILTKL
Sbjct: 247 ELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVTDVAAILVQILTKL 306

Query: 309 PSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALER 368
           P+VG + L  RYK+DA   CG+IFVQKL++ LFNGD HQAAFRILSDFRKGKFGW ALER
Sbjct: 307 PTVGAKALNNRYKMDADDFCGKIFVQKLSVHLFNGDTHQAAFRILSDFRKGKFGWAALER 366

Query: 369 PPR 370
           PPR
Sbjct: 367 PPR 367

[Close]

BLAST of Cucsa.067570 vs. TrEMBL
Match: V4VVJ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020657mg PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 3.6e-153
Identity = 278/373 (74.53%), Postives = 308/373 (82.57%), Query Frame = 1


Query: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSG--PSPPSLAPSASVSSPHPTIQIVGGKTSNFL 60
           M++ +  S  +LP+     P    C+S   PS  SLA SAS+SS  P IQ VGGK S++ 
Sbjct: 1   MAVQVQLSSLWLPSPTVTVP-FVHCKSKTKPSTTSLASSASLSSSAPIIQTVGGKQSSWH 60

Query: 61  GDSTPKGASNNELLEG--DWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDV 120
           G ++     + E  E   DW D +ADLYYWT +LRPVQWYPGHIAKTEKELKDQLKLMDV
Sbjct: 61  GGNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDV 120

Query: 121 VIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSN 180
           VIEVRDARIP+ST+HP MD WLGNR+RILVLNREDMIS ADRNAWATYF +QG KV+FSN
Sbjct: 121 VIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSN 180

Query: 181 GQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMC 240
           GQ GMGTMKL RLAK LA+DVNVKRR+KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMC
Sbjct: 181 GQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMC 240

Query: 241 PAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVA 300
           PAAPRPGVTR LKWVRFG DLE LDSPGIIPMRISDQ AAIKLAICDDIGERSY+ ADVA
Sbjct: 241 PAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVA 300

Query: 301 AILVQILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRK 360
           AILVQ+L ++P+VGI  LQ RYK+D  G CG+ FVQKLAL LFNGD HQAAFRIL+DFRK
Sbjct: 301 AILVQMLARIPTVGITALQNRYKIDMDGTCGKTFVQKLALHLFNGDTHQAAFRILTDFRK 360

Query: 361 GKFGWTALERPPR 370
           GKFGW +LERPPR
Sbjct: 361 GKFGWISLERPPR 372

[Close]

BLAST of Cucsa.067570 vs. TAIR10
Match: AT4G02790.1 (AT4G02790.1 GTP-binding family protein)

HSP 1 Score: 475.3 bits (1222), Expect = 3.4e-134
Identity = 236/338 (69.82%), Postives = 277/338 (81.95%), Query Frame = 1


Query: 36  PSASVSSPHPTIQIVGGKTSNFLGDSTPKGASNNELLEG-----DWVDFEADLYYWTNAL 95
           P+A+ S P P IQIVGGK  N   D T K  S    LE      DW++ E+D+  WT AL
Sbjct: 37  PTANSSRP-PPIQIVGGKDLNL--DVTRKDDSIGFKLEANEDEIDWMNLESDIRLWTRAL 96

Query: 96  RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNRE 155
           RPVQWYPGHI KTEKEL++QLKLMDVVIEVRDARIP+ST+HP+MDAWLGNR+RILVLNRE
Sbjct: 97  RPVQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNRE 156

Query: 156 DMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRA 215
           DMIS+ DRN WA YF +QGIKV+F+NG+ GMG MKLGRLAK+LA DVN KRR KGLLPR+
Sbjct: 157 DMISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRS 216

Query: 216 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRI 275
           VRAGI+GYPNVGKSSLINRLLKR++C AAPRPGVTRE+KWV+ G DL+LLDSPG++PMRI
Sbjct: 217 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRI 276

Query: 276 SDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVDAGGQCGQIF 335
            DQ AAIKLAICDDIGE++Y+  DVA ILVQ+L ++P VG + L  RYK+   G CG+ F
Sbjct: 277 DDQAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKIQLEGNCGKKF 336

Query: 336 VQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALERPP 369
           V+ L L LF GD+HQAAFRIL+DFRKGKFG+ +LERPP
Sbjct: 337 VKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPP 371

[Close]

BLAST of Cucsa.067570 vs. TAIR10
Match: AT2G41670.1 (AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 8.3e-24
Identity = 67/226 (29.65%), Postives = 114/226 (50.44%), Query Frame = 1


Query: 93  VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDM 152
           + W+PGH+A   + ++++LKL D+VIEVRDARIP+S+++  + + +  +RRI+ LN++D+
Sbjct: 26  INWFPGHMAAATRAIRNRLKLSDLVIEVRDARIPLSSANEDLQSQMSAKRRIIALNKKDL 85

Query: 153 ISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVR 212
            +    N W  +F       +  N       MKL  L +    +V  +     ++     
Sbjct: 86  ANPNVLNKWTRHFESSKQDCIAINAHSRSSVMKLLDLVELKLKEVIAREPTLLVM----- 145

Query: 213 AGIVGYPNVGKSSLINRL-------------LKRRMCPAAPRPGVTRELKWVRFGN--DL 272
             +VG PNVGKS+LIN +             LKR      P PGVT+++   +  +   +
Sbjct: 146 --VVGVPNVGKSALINSIHQIAAARFPVQERLKR--ATVGPLPGVTQDIAGFKIAHRPSI 205

Query: 273 ELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQIL 304
            +LDSPG++   I D    +KLA+   + +       +A   + IL
Sbjct: 206 YVLDSPGVLVPSIPDIETGLKLALSGSVKDSVVGEERIAQYFLAIL 242

[Close]

BLAST of Cucsa.067570 vs. TAIR10
Match: AT3G07050.1 (AT3G07050.1 GTP-binding family protein)

HSP 1 Score: 93.2 bits (230), Expect = 3.6e-19
Identity = 86/291 (29.55%), Postives = 134/291 (46.05%), Query Frame = 1


Query: 105 KELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWL----GNRRRILVLNREDMISSADRNA 164
           KEL   ++L DV++EV DAR P+ T    M+  +     N+  +L+LN+ D++       
Sbjct: 128 KELVKVIELSDVILEVLDARDPLGTRCTDMERMVMQAGPNKHLVLLLNKIDLVPREAAEK 187

Query: 165 WATYFTRQGIKVVF--------SN-GQHGMGTMKLGRLAKT---LAADVNVKR----RAK 224
           W  Y   +   V F        SN G       K   + +T   L AD  +K        
Sbjct: 188 WLMYLREEFPAVAFKCSTQEQRSNLGWKSSKASKPSNMLQTSDCLGADTLIKLLKNYSRS 247

Query: 225 GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLDSPG 284
             L +++  GI+G PNVGKSSLIN L +  +      PG+TR L+ V    +++LLD PG
Sbjct: 248 HELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLDCPG 307

Query: 285 IIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVDAGG 344
           ++ ++ S   A+I L  C    +R     D  + + +IL   P   + TL K    +A  
Sbjct: 308 VVMLKSSGNDASIALRNC----KRIEKLDDPVSPVKEILKLCPKDMLVTLYKIPSFEAVD 367

Query: 345 QCGQIFVQKLAL---QLFNG---DNHQAAFRILSDFRKGKFGWTALERPPR 370
                F+ K+A    +L  G   D   AA  +L D+ +GK  +  +  PP+
Sbjct: 368 D----FLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTM--PPK 408

[Close]

BLAST of Cucsa.067570 vs. TAIR10
Match: AT1G52980.1 (AT1G52980.1 GTP-binding family protein)

HSP 1 Score: 79.0 bits (193), Expect = 7.0e-15
Identity = 71/282 (25.18%), Postives = 125/282 (44.33%), Query Frame = 1


Query: 90  LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLGNRRR----IL 149
           +R   +  G   +   EL   +   DV+++V DAR P  T    ++  L    +    IL
Sbjct: 192 VRHTMFEKGQSKRIWGELYKVIDSSDVIVQVIDARDPQGTRCHHLEKTLKEHHKHKHMIL 251

Query: 150 VLNREDMISSADRNAWATYFTRQGIKVVFS---NGQHGMGTM-KLGRLAKTLAADVNVKR 209
           +LN+ D++ +     W    +++   + F    N   G G++  + R    L +D     
Sbjct: 252 LLNKCDLVPAWATKGWLRVLSKEYPTLAFHASVNKSFGKGSLLSVLRQFARLKSD----- 311

Query: 210 RAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGNDLELLD 269
                  +A+  G VGYPNVGKSS+IN L  + +C  AP PG T+  +++     + L+D
Sbjct: 312 ------KQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLID 371

Query: 270 SPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTKLPSVGIETLQKRYKVD 329
            PG++      +T  +   +      R  N  D +  + ++L ++     E LQ+ YK+ 
Sbjct: 372 CPGVVYQSRDTETDIVLKGVV-----RVTNLEDASEHIGEVLRRVKK---EHLQRAYKIK 431

Query: 330 AGGQCGQIFVQ--KLALQLFNG---DNHQAAFRILSDFRKGK 359
                    +Q  K + +L  G   D    A  IL D+++G+
Sbjct: 432 DWEDDHDFLLQLCKSSGKLLKGGEPDLMTGAKMILHDWQRGR 454

[Close]

BLAST of Cucsa.067570 vs. TAIR10
Match: AT4G10650.1 (AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14
Identity = 58/224 (25.89%), Postives = 109/224 (48.66%), Query Frame = 1


Query: 94  QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPMSTSHPQMDAWLG-NRRRILVLNREDM 153
           +WY  H+A   + + +++ L+D V+E+RDARIP+S+ +  +  +     +RI+VLN+ ++
Sbjct: 27  RWYGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSEYELLRKFSPLPSKRIIVLNKMEL 86

Query: 154 ISSADRNAWATYFTRQGIKVVFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVR 213
               +      YF  +   + ++   H    +K  +L   L + V    +A G       
Sbjct: 87  ADPLELKKCIDYFEERNY-LSYAVNSHNKDCVK--QLLNFLQSQVRELHKA-GHSGHTTT 146

Query: 214 AGIVGYPNVGKSSLINRLL-----------KRRMCPAAPRPGVTRELKWVRFGN--DLEL 273
             ++G PNVGKS+L N L            K +    + +PG T+++  ++ G+  ++ +
Sbjct: 147 MMLLGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDTKDIMSLKIGSHPNVYV 206

Query: 274 LDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQIL 304
           LD+PGI P  + D     KLA+   I +       +A + + IL
Sbjct: 207 LDTPGIFPPNLYDAEICAKLALTGAIPDDIVGELKLARLFLTIL 246

[Close]

BLAST of Cucsa.067570 vs. NCBI nr
Match: gi|778702006|ref|XP_011655122.1| (PREDICTED: mitochondrial ribosome-associated GTPase 1 [Cucumis sativus])

HSP 1 Score: 748.0 bits (1930), Expect = 7.6e-213
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 1


Query: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60
           MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD
Sbjct: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120
           STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV
Sbjct: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180

Query: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300
           RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

Query: 301 QILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG 360

Query: 361 WTALERPPR 370
           WTALERPPR
Sbjct: 361 WTALERPPR 369

[Close]

BLAST of Cucsa.067570 vs. NCBI nr
Match: gi|659126309|ref|XP_008463116.1| (PREDICTED: mitochondrial ribosome-associated GTPase 1 [Cucumis melo])

HSP 1 Score: 724.9 bits (1870), Expect = 6.9e-206
Identity = 359/369 (97.29%), Postives = 362/369 (98.10%), Query Frame = 1


Query: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60
           MSLHIHPSGFFLPNTRTI P L FCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD
Sbjct: 1   MSLHIHPSGFFLPNTRTISPHLSFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120
           STPKGASN++LLEGDWVDFEADLYYWTN LRPVQWYPGHIAKTEKELKDQLKLMDVVIEV
Sbjct: 61  STPKGASNSDLLEGDWVDFEADLYYWTNTLRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQ G
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQLG 180

Query: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300
           RPGVTRELKWVRFG DLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGKDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

Query: 301 QILTKLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG 360
           QILTKLPSVGIE+LQKRYKVDAGGQCG IFVQKLALQLFNGDNHQAAFRILSDFRKGKFG
Sbjct: 301 QILTKLPSVGIESLQKRYKVDAGGQCGHIFVQKLALQLFNGDNHQAAFRILSDFRKGKFG 360

Query: 361 WTALERPPR 370
           WTALERPPR
Sbjct: 361 WTALERPPR 369

[Close]

BLAST of Cucsa.067570 vs. NCBI nr
Match: gi|700195698|gb|KGN50875.1| (hypothetical protein Csa_5G308800 [Cucumis sativus])

HSP 1 Score: 627.5 bits (1617), Expect = 1.5e-176
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1


Query: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60
           MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD
Sbjct: 1   MSLHIHPSGFFLPNTRTIYPQLFFCRSGPSPPSLAPSASVSSPHPTIQIVGGKTSNFLGD 60

Query: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120
           STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV
Sbjct: 61  STPKGASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEV 120

Query: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180
           RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG
Sbjct: 121 RDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHG 180

Query: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240
           MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP
Sbjct: 181 MGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAP 240

Query: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300
           RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV
Sbjct: 241 RPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILV 300

Query: 301 QILTKLPSVG 311
           QILTKLPSVG
Sbjct: 301 QILTKLPSVG 310

[Close]

BLAST of Cucsa.067570 vs. NCBI nr
Match: gi|702499894|ref|XP_010038089.1| (PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1 [Eucalyptus grandis])

HSP 1 Score: 563.9 bits (1452), Expect = 2.0e-157
Identity = 280/364 (76.92%), Postives = 309/364 (84.89%), Query Frame = 1


Query: 8   SGFFLPNTRTIYPQLFFCRSGPS--PPSLAPSASVSSPHPTIQIVGGKTSNFLGDSTPKG 67
           S   LPN+ ++      CR+ PS  PP+  PS S SSP P+ QIVGG+ S + G    + 
Sbjct: 6   SSLCLPNSPSLPFNFSLCRARPSLAPPAATPSLSSSSPSPSFQIVGGRNSGWRGTGVAQF 65

Query: 68  ASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARI 127
             + E  E DW+D +ADL +WT  LR VQWYPGHIAKTEKELK+QLKLMDVV+EVRDARI
Sbjct: 66  GGDEE--EADWLDLDADLCHWTKGLRTVQWYPGHIAKTEKELKEQLKLMDVVVEVRDARI 125

Query: 128 PMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMK 187
           P+ST+HP MD+WLG R+RILVLNREDMIS ADRNAWATYFT+QGIKV+F+NGQ GMGTMK
Sbjct: 126 PLSTTHPLMDSWLGTRKRILVLNREDMISKADRNAWATYFTKQGIKVIFANGQLGMGTMK 185

Query: 188 LGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 247
           LGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT
Sbjct: 186 LGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVT 245

Query: 248 RELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILTK 307
           RELKWV FG DLELLDSPGIIPMRISDQ AAIKLAICDDIGE+SYN ADVAAILVQ+LT+
Sbjct: 246 RELKWVHFGKDLELLDSPGIIPMRISDQVAAIKLAICDDIGEKSYNVADVAAILVQMLTR 305

Query: 308 LPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTALE 367
           LP+VG+  LQ RYK+D  G CG IFVQK+ALQLFNGD HQAAFRILSDFRKGKFGW ALE
Sbjct: 306 LPAVGVGVLQNRYKIDVDGHCGDIFVQKVALQLFNGDIHQAAFRILSDFRKGKFGWVALE 365

Query: 368 RPPR 370
           RPPR
Sbjct: 366 RPPR 367

[Close]

BLAST of Cucsa.067570 vs. NCBI nr
Match: gi|629083445|gb|KCW49890.1| (hypothetical protein EUGRSUZ_K03362 [Eucalyptus grandis])

HSP 1 Score: 559.3 bits (1440), Expect = 5.0e-156
Identity = 280/365 (76.71%), Postives = 309/365 (84.66%), Query Frame = 1


Query: 8   SGFFLPNTRTIYPQLFFCRSGPS--PPSLAPSASVSSPHPTIQIVGGKTSNFLGDSTPKG 67
           S   LPN+ ++      CR+ PS  PP+  PS S SSP P+ QIVGG+ S + G    + 
Sbjct: 6   SSLCLPNSPSLPFNFSLCRARPSLAPPAATPSLSSSSPSPSFQIVGGRNSGWRGTGVAQF 65

Query: 68  ASNNELLEGDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARI 127
             + E  E DW+D +ADL +WT  LR VQWYPGHIAKTEKELK+QLKLMDVV+EVRDARI
Sbjct: 66  GGDEE--EADWLDLDADLCHWTKGLRTVQWYPGHIAKTEKELKEQLKLMDVVVEVRDARI 125

Query: 128 PMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKVVFSNGQHGMGTMK 187
           P+ST+HP MD+WLG R+RILVLNREDMIS ADRNAWATYFT+QGIKV+F+NGQ GMGTMK
Sbjct: 126 PLSTTHPLMDSWLGTRKRILVLNREDMISKADRNAWATYFTKQGIKVIFANGQLGMGTMK 185

Query: 188 LGRLAKTLAADVNVKRRAKGLLPRA-VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGV 247
           LGRLAKTLAADVNVKRRAKGLLPRA VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGV
Sbjct: 186 LGRLAKTLAADVNVKRRAKGLLPRAQVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGV 245

Query: 248 TRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNAADVAAILVQILT 307
           TRELKWV FG DLELLDSPGIIPMRISDQ AAIKLAICDDIGE+SYN ADVAAILVQ+LT
Sbjct: 246 TRELKWVHFGKDLELLDSPGIIPMRISDQVAAIKLAICDDIGEKSYNVADVAAILVQMLT 305

Query: 308 KLPSVGIETLQKRYKVDAGGQCGQIFVQKLALQLFNGDNHQAAFRILSDFRKGKFGWTAL 367
           +LP+VG+  LQ RYK+D  G CG IFVQK+ALQLFNGD HQAAFRILSDFRKGKFGW AL
Sbjct: 306 RLPAVGVGVLQNRYKIDVDGHCGDIFVQKVALQLFNGDIHQAAFRILSDFRKGKFGWVAL 365

Query: 368 ERPPR 370
           ERPPR
Sbjct: 366 ERPPR 368

The following BLAST results are available for this feature:

BLAST of Cucsa.067570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DGP3_ARATH	6.0e-133	69.82	DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana GN=DGP3 PE=2 SV=1	[more]
RBGA_BACLD	1.8e-44	37.37	Ribosome biogenesis GTPase A OS=Bacillus licheniformis (strain ATCC 14580 / DSM ...	[more]
RBGA_BACPZ	2.3e-44	36.30	Ribosome biogenesis GTPase A OS=Bacillus subtilis subsp. spizizenii (strain ATCC...	[more]
RBGA_BACSU	3.0e-44	36.30	Ribosome biogenesis GTPase A OS=Bacillus subtilis (strain 168) GN=rbgA PE=1 SV=1	[more]
RBGA_GEOSW	5.2e-44	37.94	Ribosome biogenesis GTPase A OS=Geobacillus sp. (strain WCH70) GN=rbgA PE=3 SV=1	[more]

BLAST of Cucsa.067570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMJ7_CUCSA	1.0e-176	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G308800 PE=4 SV=1	[more]
A0A059A828_EUCGR	1.4e-157	76.92	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03362 PE=4 SV=1	[more]
A0A059A972_EUCGR	3.5e-156	76.71	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03362 PE=4 SV=1	[more]
A9PEM5_POPTR	1.2e-153	77.69	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s23150g PE=2 SV=1	[more]
V4VVJ6_9ROSI	3.6e-153	74.53	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020657mg PE=4 SV=1	[more]

BLAST of Cucsa.067570 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02790.1	3.4e-134	69.82	GTP-binding family protein	[more]
AT2G41670.1	8.3e-24	29.65	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G07050.1	3.6e-19	29.55	GTP-binding family protein	[more]
AT1G52980.1	7.0e-15	25.18	GTP-binding family protein	[more]
AT4G10650.1	2.0e-14	25.89	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of Cucsa.067570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702006\|ref\|XP_011655122.1\|	7.6e-213	100.00	PREDICTED: mitochondrial ribosome-associated GTPase 1 [Cucumis sativus]	[more]
gi\|659126309\|ref\|XP_008463116.1\|	6.9e-206	97.29	PREDICTED: mitochondrial ribosome-associated GTPase 1 [Cucumis melo]	[more]
gi\|700195698\|gb\|KGN50875.1\|	1.5e-176	100.00	hypothetical protein Csa_5G308800 [Cucumis sativus]	[more]
gi\|702499894\|ref\|XP_010038089.1\|	2.0e-157	76.92	PREDICTED: mitochondrial ribosome-associated GTPase 1 isoform X1 [Eucalyptus gra...	[more]
gi\|629083445\|gb\|KCW49890.1\|	5.0e-156	76.71	hypothetical protein EUGRSUZ_K03362 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006073	GTP_binding_domain
IPR019991	GTP-bd_ribosome_bgen
IPR023179	GTP-bd_ortho_bundle_sf
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0005623	cell
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.067570.2	Cucsa.067570.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006073	GTP binding domain	PRINTS	PR00326	GTP1OBG	coord: 259..274 score: 1.7E-6coord: 213..233 score: 1.
IPR006073	GTP binding domain	PFAM	PF01926	MMR_HSR1	coord: 213..302 score: 7.3
IPR019991	GTP-binding protein, ribosome biogenesis	TIGRFAMs	TIGR03596	TIGR03596	coord: 93..365 score: 8.1
IPR023179	GTP-binding protein, orthogonal bundle domain	GENE3D	G3DSA:1.10.1580.10		coord: 270..359 score: 6.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 106..266 score: 5.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 99..328 score: 9.55
None	No IPR available	PANTHER	PTHR11089	GTP-BINDING PROTEIN-RELATED	coord: 73..368 score: 1.0E
None	No IPR available	PANTHER	PTHR11089:SF36	GTP-BINDING PROTEIN	coord: 73..368 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.067570	Csa5G308790	Cucumber (Chinese Long) v2	cgycuB061
Cucsa.067570	CSPI05G13420	Wild cucumber (PI 183967)	cgycpiB062
Cucsa.067570	CsaV3_5G020040	Cucumber (Chinese Long) v3	cgycucB064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None