Cucsa.051390 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.051390
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00557 : 546734 .. 550995 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCATTGTCATCCATTTGGCATACCTCTAGAATGAGAAATGAAGATGTTTCGAGCCCTAACTTGAAATGTTCACAATTGCAGTTTCGAAAACCATTCGATCTCAATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCAGTATGTCTTCTTTTTAATCTTCATCTGTAACAATAGTTCTTCTAGTAATATTAAGCTTGTGGTATTTTAGGCATTAATTATTTTATTTTGATTTTTGTATAGTTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTATAGAACTATTTTGATTTAGTTATGTGTTCTGAATGTTTGTGCAAAAATCAAACGATCTCCATTCTCTCCAATAATCCATTTTGCATTTTTCAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGTCAGTGTTTTAATTACACAATTTATATCATATGTTTTCAATTTATTGTCCTTTACATTGGTGGCCTCTTAATGATCTCATCAACTTTTCCATTCTGTTCCCTAGTAGATATGTTTCGTTTTATAATTCATTTTTCGTCTGTTAAACAGTTAACTGATGATAGCTATTATTAGTGATACCTTTCAATTTAATAAATGATTGTTTTGTATATAATTTTTTAAAATTTTCTCACGTTGAAAACTACCATTAGTGAATAAAATTAATGATAACTTAAAAGTTGATTAGAATTAGTGGGCTTGACTCTTACATTATTTTTTAAAATAATTAATATAGAAGTTTTTTTTTTCTTTTTTACTCCTTATTACATTGTAGTTTTTTTTTTCGGTTCTCGAGTTTAATTTTCACGTAAGCCTTGGTTTCGTGTTTATTGCTTTTAGTACTAGTCATAAGATGTTGTAGGCCTTTTAACCCTTAATCTCTTAAGTTTTAACTTTAGAGATATATGATTGTCCAAACCTTAGCTTTAACCATGACCATGAGGTCATAGGATGATCCAAGCTAAGTCTTAACCTCACCCTCACCCGTTTCTTTAGTCTTAGAGTTATACAGGCTTTGAGCCTAAACCTATATTCTAATTTTCTGCCTCTTCTATAACACATTGATATATGTTCTCTATATGTGAAATTTATAATTGGCTATGATCATTGATATGAGTTTTATAAATGATAGAACACATCTATTGATGATAGAAGTTTATCACACATACATTTTGTAAAAGCTAAGGAAAAGTTTTATATCTATATATATATGATAAAAGGTTTAATTATATATATGTATTCACTGTTTGATTATTTGATCACCTTCATCGTACAGTTCTCTTTATAAAATGCTGGAGGATATCTGCTTTAATCGGACTTTAGCTCTTTCACAAATTGTGATTCCTTTTCATATAAAATTTGGTACGGTTATTATGTGTGTTTTTGTTACATAATATTTAACAAACTGTTTAATTTAATTTCTGTCCAAATTTAAAAATTATTAATAGAGAAAACAACATGAGAGTGGGAAAAGAAGTAACATGAAAGTTGATATTTGTGATGCCACAAATTTCAACACTCTATCATCTCCACGGGTCCATTGTGGTATGCTTCAGCCAAGTTCTTCATCCTCGATGAAGATTCCGATTCTGGAAATCGTCGAAAATTCATCAAAGATGTTTGTTTGGGAGTCGAAATTACAAATGAAAATTCATTAGTCCAGTTTGGTATGACTATTGGATATAAGTCGTTAATTCCAAACCCTTTAGATTTATGGTTAAACGAGAGAGAGGTATAATCAATATTTCTCATTTCTCTCCTTACAGGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGTACGTTACAATCTTTTTCTCTTTATCTTAAGCACACAATACTTGTATAAATATATGTAGAGTTGCATCTATTTTTTATTTTTTATTTTTTATTTTTTATACCACTCCAACCACGCACCTAACAAAAACCTTAACACTTTGAAAAATGAAAAGGTAGAAGAAGAAAGAAAAATTTATCATACAAACAATTGTGGTTCAACTCATCATGGTATGGTGGACTGTAAAATGATTGGTGGAACCGTTATAAAATTAAATCACCAAACAAAAAACGTAAAAGAAAAAACACGTAAATGAAGAGAGAATTGATATATAAATTTATATGATTCATTAATATTATTGTGTTAGCTTCGTTCCAACGATTTTATTAGAGAAAATGTATACTCATAGGACTAGAAAATTTACAGGGTGTTCTTCTTTAAACCTAAATCATAATTGTAAATAACTTGAAATAATATTAAATATGATGAATATAATTTCTCATTAGGGTTTTAGTGCTCCGAATCTTCACTGAGGCACGTTACCCTTGGACTCCTGCTGGCTTTGACCGATTAACAAGACTCCTTATTTGATTGATTGTAGTATGCTAGTGATAATTTCAAGGCATTTCCACCTACACTTATAATGCACATTAGAAGGTTATAAATGCACACAACCAAGAGTCGACGAGCACTTTTGTCAGCAAAATCCAGAATAACTCAAACACTTGTTGGTAAAGTTATTATAAGTCCTTTTGGCGTACGTGTTTCAACAGTAGTTAACATTCCCACGATGACTTTTTTAAAATTCATTGAATTATTTTGTAATTCTTTGGAACTTTCTGATTGTGATTCAGAACTAATTCATAAGGTCGTTTAAAGTAAGTTTTAATTAATTTGTTCATTTTGAATAGTTTTTTAGATAAAAGTTAAGGTTTTGAAGTGAGATCCAAATATTGAAATCTTGTTTTAATAATTCAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTAAGTAAGTTTCTAGCTACCTGGTTGGGCTTGGTTGTTATGTGTCATTCTGTTATTGTAGTTTATTTTTGCTATGTATAGATAAAATGCATGGCTCATGTGAACTGATTCTGAAATAGGAATCAATGATTGTTCTGCGATCTGGTTGGAATACGCCTGGATGCTTCTTAAAATGTTGTGTGCCATTCTGTTTACATGGTTGAACACACCTAAATGTTGGATGTTATGATTATGCTTTCTATCACGTGTGTCAATTGTTTCTGACTTGTTTGAGTGATAAGTATCATGTATGGGATGTGAAACATGATAAGTAAATCATGTATGAGTTGTGGAGTATGACGCGCGTAAATCATGTATGATTTGTGGAGCATGATGCACGTAAATCATGGGTTGCAAAATATGACACGTAAATCATGTATGTGTTAAGGAGTATGACACTTATGTCATGTATGGGTTACAAAACATAACATTAAATCATTATGGGTACAGTGTTATGGAGCATGATATGTAAATCGTGTATAGGTGACCAAGCATGACAAGTAAATCATGCATGAGTGATAGAACGTCATGACCTTAAATCATGTGCATGCACGTGTGATTTGCATGTCACAGTTCATGTGTAGCAAAATTTTAATTGTGATTAATCTTTCTGTAAAACCAAGCATCTTTTATTATTGTGTTCAACATGATCATGTCTAGCATGTATATTATTGTTTGATGGTTTCTTAGGTATGAGCTACTTTTTGTACGTGTTGTGTATTGACACCCCAAGTCTTTTGTAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGAGAAAGAATGGCTTATTGTTTTGACTCTAAACTTGGGCGTGATTGCAATAGACTTTAGCTTGTTTTCCTAACCTTGAGAGTTCGTTGATTTTGGTTATGGTTTGCAAAAGTTTGGTTTCCATGCCTGCATCTTATAGTTGAATTGGAGTTTAACTTGATTTTGTGGTTTGATCTTTGCTATATGTCCTCAAACTTTTGCTTTTGATTATATATATTATGATGAGAGATGATGATGGTGTTTAGAAACTGTTCACACCTAGTGAATATGTTTCGATGCACTCCGAACCCAACTCGTATCCTTTTCGAAAAGAAAAAAAAAATTGATTTGAGTGTT

mRNA sequence

TCTCATTGTCATCCATTTGGCATACCTCTAGAATGAGAAATGAAGATGTTTCGAGCCCTAACTTGAAATGTTCACAATTGCAGTTTCGAAAACCATTCGATCTCAATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCATTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGAGAAAGAATGGCTTATTGTTTTGACTCTAAACTTGGGCGTGATTGCAATAGACTTTAGCTTGTTTTCCTAACCTTGAGAGTTCGTTGATTTTGGTTATGGTTTGCAAAAGTTTGGTTTCCATGCCTGCATCTTATAGTTGAATTGGAGTTTAACTTGATTTTGTGGTTTGATCTTTGCTATATGTCCTCAAACTTttgcttttgattatatatattatgatgagagatgatgatggtgtttagaaactgttcacacctagtgaatatgtttcgatgcactccgaacccaactcgtatccttttcgaaaagaaaaAAAAAATTGATTTGAGTGTT

Coding sequence (CDS)

ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCATTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA

Protein sequence

MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSVDNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET*
Homology
[Close]
BLAST of Cucsa.051390 vs. TrEMBL
Match: A0A0A0M1H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569140 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.6e-85
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV 60
           MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV
Sbjct: 1   MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV 60

Query: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120
           DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ
Sbjct: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120

Query: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKI 159
           NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKI
Sbjct: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKI 158

[Close]
BLAST of Cucsa.051390 vs. NCBI nr
Match: gi|449435619|ref|XP_004135592.1| (PREDICTED: uncharacterized protein LOC101221597 [Cucumis sativus])

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

Query: 1   MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV 60
           MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV
Sbjct: 1   MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV 60

Query: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120
           DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ
Sbjct: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120

Query: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET 175
           NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET
Sbjct: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET 174

[Close]
BLAST of Cucsa.051390 vs. NCBI nr
Match: gi|700210940|gb|KGN66036.1| (hypothetical protein Csa_1G569140 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-85
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1 

Query: 1   MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV 60
           MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV
Sbjct: 1   MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSV 60

Query: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120
           DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ
Sbjct: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120

Query: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKI 159
           NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKI
Sbjct: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKI 158

[Close]
BLAST of Cucsa.051390 vs. NCBI nr
Match: gi|659099429|ref|XP_008450596.1| (PREDICTED: uncharacterized protein LOC103492138 isoform X1 [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 4.6e-35
Identity = 105/194 (54.12%), Postives = 129/194 (66.49%), Query Frame = 1 

Query: 6   MAPTNT----TAPSEENKKKRSASASASSGEAQ-VQGDAKRSCHGSSS-FPIDHSGFGSS 65
           MAP NT    TA S+ENKKKRS SAS  SGEAQ VQG AKRS HGSSS FPID+      
Sbjct: 1   MAPINTNNSTTASSKENKKKRSVSAS--SGEAQEVQGAAKRSSHGSSSSFPIDYGFDFVI 60

Query: 66  VDNLIVGEGVNGFVEKWK-EFEPAYRQKVFKDMNTMAQSILSPITMKDGAIH---NLSFF 125
           +D+  + EGV    +KWK ++E A+R++V KD+++ A ++LSP+TM+DGA     N SF 
Sbjct: 61  IDDPKIEEGV----KKWKLDYEAAFRRQVAKDIDSRALALLSPLTMEDGATQLHDNSSFI 120

Query: 126 QGISQNAMEIVGDFFEDYYRQMGHTYMKKEAS-KEHKSTTRRK----------------I 173
           QGISQ  MEIVGDFFED+  QMG T  +KEAS KEHKST R+K                +
Sbjct: 121 QGISQKGMEIVGDFFEDFC-QMGRTIPEKEASTKEHKSTPRKKGEDENYVDNGGATPSFV 180

[Close]
BLAST of Cucsa.051390 vs. NCBI nr
Match: gi|659099431|ref|XP_008450598.1| (PREDICTED: uncharacterized protein LOC103492138 isoform X2 [Cucumis melo])

HSP 1 Score: 76.6 bits (187), Expect = 4.7e-11
Identity = 49/97 (50.52%), Postives = 59/97 (60.82%), Query Frame = 1 

Query: 96  QSILSPITMKDGAIH---NLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEAS-KEHK 155
           +  +SP+  +DGA     N SF QGISQ  MEIVGDFFED+  QMG T  +KEAS KEHK
Sbjct: 56  EKFISPVG-EDGATQLHDNSSFIQGISQKGMEIVGDFFEDFC-QMGRTIPEKEASTKEHK 115

Query: 156 STTRRK----------------IGEDENYNTGGSGEE 173
           ST R+K                +GE E+YN GG+GEE
Sbjct: 116 STPRKKGEDENYVDNGGATPSFVGEGEDYNLGGAGEE 150

The following BLAST results are available for this feature:
BLAST of Cucsa.051390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M1H1_CUCSA2.6e-85100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569140 PE=4 SV=1[more]
BLAST of Cucsa.051390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435619|ref|XP_004135592.1|2.3e-95100.00PREDICTED: uncharacterized protein LOC101221597 [Cucumis sativus][more]
gi|700210940|gb|KGN66036.1|3.7e-85100.00hypothetical protein Csa_1G569140 [Cucumis sativus][more]
gi|659099429|ref|XP_008450596.1|4.6e-3554.12PREDICTED: uncharacterized protein LOC103492138 isoform X1 [Cucumis melo][more]
gi|659099431|ref|XP_008450598.1|4.7e-1150.52PREDICTED: uncharacterized protein LOC103492138 isoform X2 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.051390.1Cucsa.051390.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.051390Csa1G569140Cucumber (Chinese Long) v2cgycuB033
Cucsa.051390MELO3C015282Melon (DHL92) v3.5.1cgymeB030
Cucsa.051390CSPI01G26180Wild cucumber (PI 183967)cgycpiB034
Cucsa.051390MELO3C015282.2Melon (DHL92) v3.6.1cgymedB029
Cucsa.051390CsaV3_1G038560Cucumber (Chinese Long) v3cgycucB035
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.051390Watermelon (97103) v2cgywmbB033