Cucsa.049910 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.049910
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionNon-specific lipid-transfer protein
Locationscaffold00551 : 67397 .. 69072 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCAAAATGGAGGGTTGTCGTCGTTTTAGTTTCAAATGGCTTTGGTTAATAATGCTGCTGCTAAGGTCACCGTCGTGGGTGAGGTTTGTAGGTGGAGATGATAAGAAAGACAGAGAGGAATGCACACCGCAATTGGCTGGGATGGCCACATGTCTGCCCTACGTGAGCGGTGATGCAAAGGCTCCGACGCCTGACTGTTGCAGTGGACTAAAGGAAGTGCTTAAGAACGACAAGAAGTGCTTATGTGTTATAGTTAGAGATCGGAATGACCCTGACTTGGGGCTTCAAATAAATGTCACGTTGGCCTTAAGCTTGCCTGATATTTGCCATGCCACTGCCAATGTCTCCAATTGTCCAGGTAAATTCACCCAATCAAAATTACTGATCATTTTATTTTTTTTACATACATGTTTTAGTCCTTCTTCCCATTAGAGTATTCATTTTTTTGGGCTTAGATTTAATGTTGGCAGTGTTTGGGTTGTAACGAGTAAAGTTGTTTAGTTGTGGTTAATATGCTATTTCTTTAATTGTGACGTTGATAATTTATTTAAGTAAAACATAGGAGTAGAGTTAACATTTGAATCGAATATGTTTTAGAGTTCGGCGTGATTCTTCAGTTAAAGGTTCGGTCATAACGAAATATGATGCTTTGGTATGTAGATTGACAGAGACTTGAAAGATAAAAAACAAAAATTCTTCCTAAATTCTTAGAAATTTAGAAAAGTTGGAAAATTATTTGTTCCTTATTTGAAATTTGTTTTTCTTTCTTTTAGATGAAGAATTAGAACTTGAGATAACTAAGCTAACCTCCGTTAGTCTAACACCTACTACTAAGTGTGTGGTTCGATATCCATTTCAACTTGAAGTTTTTTTTTTATTACAAAAAGCAAACAAAAGAAAATTAGTTCAATTCGATTTTTAATCATAACGGTATAAATATTCAGGTTCACTTTCCAAACCCAAAATTAGATTGAACTTAATTTTCTCATATTTTTAAATTAAACAGAACACCGTCACTATTAATATTAAATTTTTAGTTCAATTTTGTTAAGGATTTCGAACTAAATTATTAAATTAATACAAATCAAAATTTGATAGATTCAATCATATTTAAAATCTATATCATAACATATATTTTTAAATATTTGTTTGTTTGTTTTTGATGCAGCTCTATTAAACATGCCATCAAATTCAAGCGATGCGCAAGTCTTTTATCAATTGGGGAAAGGAAAAAGCTCCTCTGCTTTAGCACCTGCTCCCATGCTAAGCCCTTCTTCTTCTCCTACCATTAATTCCACAGGTAATGTGCCAGCCTCTTCACCTTTTTTCTTTTCTTTTCCTTTTAATAATAATTTTAAAATTATTATTCATAAAAGAAAATTTATATGGTTATTAATGGTTTTTTTGTTTGTGAAAATTGTAGTTGGAGGGGGAAGTAAAAGTGGGGCAGAGGGTGAAGGTTACAAGAGAGGAAAGAAAAGGGTAGCATTGGAGATTTTGGTTGTTGTTGCTCCTCTATTGCTTTTGCTTTAGTTGGATTATATTATTCAATATCATGTGTACAAAAAGGCACACATTTTCAGCATATTCATGCTTTTATATTCCTATCACATATCTAAATTCATCTTCTAAAATCCACTTTGAGTATTGATGTATGTTATCTTAATTTAATAAA

mRNA sequence

TACCAAAATGGAGGGTTGTCGTCGTTTTAGTTTCAAATGGCTTTGGTTAATAATGCTGCTGCTAAGGTCACCGTCGTGGGTGAGGTTTGTAGGTGGAGATGATAAGAAAGACAGAGAGGAATGCACACCGCAATTGGCTGGGATGGCCACATGTCTGCCCTACGTGAGCGGTGATGCAAAGGCTCCGACGCCTGACTGTTGCAGTGGACTAAAGGAAGTGCTTAAGAACGACAAGAAGTGCTTATGTGTTATAGTTAGAGATCGGAATGACCCTGACTTGGGGCTTCAAATAAATGTCACGTTGGCCTTAAGCTTGCCTGATATTTGCCATGCCACTGCCAATGTCTCCAATTGTCCAGCTCTATTAAACATGCCATCAAATTCAAGCGATGCGCAAGTCTTTTATCAATTGGGGAAAGGAAAAAGCTCCTCTGCTTTAGCACCTGCTCCCATGCTAAGCCCTTCTTCTTCTCCTACCATTAATTCCACAGTTGGAGGGGGAAGTAAAAGTGGGGCAGAGGGTGAAGGTTACAAGAGAGGAAAGAAAAGGGTAGCATTGGAGATTTTGGTTGTTGTTGCTCCTCTATTGCTTTTGCTTTAGTTGGATTATATTATTCAATATCATGTGTACAAAAAGGCACACATTTTCAGCATATTCATGCTTTTATATTCCTATCACATATCTAAATTCATCTTCTAAAATCCACTTTGAGTATTGATGTATGTTATCTTAATTTAATAAA

Coding sequence (CDS)

ATGGAGGGTTGTCGTCGTTTTAGTTTCAAATGGCTTTGGTTAATAATGCTGCTGCTAAGGTCACCGTCGTGGGTGAGGTTTGTAGGTGGAGATGATAAGAAAGACAGAGAGGAATGCACACCGCAATTGGCTGGGATGGCCACATGTCTGCCCTACGTGAGCGGTGATGCAAAGGCTCCGACGCCTGACTGTTGCAGTGGACTAAAGGAAGTGCTTAAGAACGACAAGAAGTGCTTATGTGTTATAGTTAGAGATCGGAATGACCCTGACTTGGGGCTTCAAATAAATGTCACGTTGGCCTTAAGCTTGCCTGATATTTGCCATGCCACTGCCAATGTCTCCAATTGTCCAGCTCTATTAAACATGCCATCAAATTCAAGCGATGCGCAAGTCTTTTATCAATTGGGGAAAGGAAAAAGCTCCTCTGCTTTAGCACCTGCTCCCATGCTAAGCCCTTCTTCTTCTCCTACCATTAATTCCACAGTTGGAGGGGGAAGTAAAAGTGGGGCAGAGGGTGAAGGTTACAAGAGAGGAAAGAAAAGGGTAGCATTGGAGATTTTGGTTGTTGTTGCTCCTCTATTGCTTTTGCTTTAG

Protein sequence

MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKKRVALEILVVVAPLLLLL*
Homology
[Close]
BLAST of Cucsa.049910 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.7e-47
Identity = 88/143 (61.54%), Postives = 112/143 (78.32%), Query Frame = 1 

Query: 29  GGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRND 88
           G D  KD+EECT QL GMATCLPYV G AK+PTPDCCSGLK+V+ +D KCLC+I+++RND
Sbjct: 26  GADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERND 85

Query: 89  PDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAPAP 148
           PDLGLQ+NV+LAL+LP +CHATA+++ CPALL++  NS DAQVFYQL KG + +  A AP
Sbjct: 86  PDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETVSASAP 145

Query: 149 MLSPSSSPTINSTVG--GGSKSG 170
             S S   +++ST G   G+ SG
Sbjct: 146 TGSASEPTSMSSTPGSSAGNNSG 168

[Close]
BLAST of Cucsa.049910 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.4e-09
Identity = 45/135 (33.33%), Postives = 65/135 (48.15%), Query Frame = 1 

Query: 38  ECTPQLAGMATCLPYVS--GDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRNDPDLGLQI 97
           +C+  +  MA CL +VS  G    P   CCSGLK VLK D +CLC     ++   LG+ +
Sbjct: 42  DCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAF--KSSASLGVTL 101

Query: 98  NVTLALSLPDICHATA-NVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAPAP------ 157
           N+T A +LP  C   A +++ C  L   PS +            +++  LAP P      
Sbjct: 102 NITKASTLPAACKLHAPSIATC-GLSVAPSTAPGLAPGVAAAGPETAGFLAPNPSSGNDG 161

Query: 158 -MLSPSSSPTINSTV 163
             L P+S  T+ S V
Sbjct: 162 SSLIPTSFTTVLSAV 173

[Close]
BLAST of Cucsa.049910 vs. TrEMBL
Match: A0A0A0K6P6_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_7G430130 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 8.5e-109
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP 60
           MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP
Sbjct: 1   MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP 60

Query: 61  TPDCCSGLKEVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL 120
           TPDCCSGLKEVL+NDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL
Sbjct: 61  TPDCCSGLKEVLQNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL 120

Query: 121 NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKK 180
           NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKK
Sbjct: 121 NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKK 180

Query: 181 RVALEILVVVAPLLLLL 198
           RVALEILVVVAPLLLLL
Sbjct: 181 RVALEILVVVAPLLLLL 197

[Close]
BLAST of Cucsa.049910 vs. TrEMBL
Match: A0A0D2QYL3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G035100 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.4e-47
Identity = 99/164 (60.37%), Postives = 124/164 (75.61%), Query Frame = 1 

Query: 12  LWLIMLLLRSPSWVRFVGGD--DKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLK 71
           L L++  +   S    +GGD  + KD+EECT QL G+ATCLPYV G+AKAPTPDCCSGLK
Sbjct: 79  LVLVIATIFMVSAAGVMGGDSGEDKDKEECTEQLVGLATCLPYVGGNAKAPTPDCCSGLK 138

Query: 72  EVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDA 131
           +VLKN+KKCLC+I++DRNDPDLGL INVTLALSLP +C+A AN+S CP LL+M  NS +A
Sbjct: 139 QVLKNNKKCLCIIIKDRNDPDLGLNINVTLALSLPSVCNAPANISKCPELLHMDPNSPEA 198

Query: 132 QVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGE 174
           QVFYQL K  SS+      + SP+S+PT  ++VGG   S +EGE
Sbjct: 199 QVFYQLSKSSSSN----GGLQSPASAPT--ASVGGSPISSSEGE 236

[Close]
BLAST of Cucsa.049910 vs. TrEMBL
Match: W9R7Y6_9ROSA (Putative GPI-anchored protein OS=Morus notabilis GN=L484_002667 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.2e-47
Identity = 101/173 (58.38%), Postives = 122/173 (70.52%), Query Frame = 1 

Query: 25  VRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVR 84
           V F   D  KDREECT QL G+ATCLPYV G AKAPTPDCCSGLK+VLK++KKCLCV++R
Sbjct: 3   VIFATEDPAKDREECTEQLVGLATCLPYVGGQAKAPTPDCCSGLKQVLKDNKKCLCVVIR 62

Query: 85  DRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSAL 144
           DRNDPDLGLQINVTLALSLP +C+A ANVS CP LL M  +S +AQVFYQL +  + +  
Sbjct: 63  DRNDPDLGLQINVTLALSLPSVCNAPANVSKCPELLKMDPHSPEAQVFYQLERNSTKTDS 122

Query: 145 APAPMLSPSSSPTINSTVGGGSK--SGAEGEGYKRGKKRVALEILVVVAPLLL 196
            P+P      SP+    + G SK  S + G G + GKKR  LE   ++  +LL
Sbjct: 123 NPSP------SPSAGGHISGKSKGLSASSGSGGRSGKKR--LEWKAIIGSVLL 167

[Close]
BLAST of Cucsa.049910 vs. TrEMBL
Match: D7LKY7_ARALL (Protease inhibitor/seed storage/lipid transfer protein family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483556 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46
Identity = 107/190 (56.32%), Postives = 129/190 (67.89%), Query Frame = 1 

Query: 13  WLIMLLLRSPSWVRFVG-----GDDK-KDREECTPQLAGMATCLPYVSGDAKAPTPDCCS 72
           W I L+  S   +  V      GDDK KD+EECT QL GMATCLPYV G AK+PTPDCCS
Sbjct: 4   WRINLMATSIVLIMVVAMVVDAGDDKAKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCS 63

Query: 73  GLKEVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNS 132
           GLK+VL ++KKCLCVI++DRNDPDLGLQINV+LAL+LP +CHATA+V+ CPALL++  NS
Sbjct: 64  GLKQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHATADVTKCPALLHLDPNS 123

Query: 133 SDAQVFYQLGKG--KSSSALAPAPMLS--PSSSPTINSTVGGGSKSGAEGEGYKRG---- 189
            DAQVFYQL KG  K+S A AP  + S   S SPT  S  G  S       G        
Sbjct: 124 PDAQVFYQLAKGSNKTSPASAPTGLASGPTSMSPTAGSDDGNNSGRTTSVPGRNNAQSFY 183

[Close]
BLAST of Cucsa.049910 vs. TrEMBL
Match: V4KMF4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001638mg PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46
Identity = 100/195 (51.28%), Postives = 132/195 (67.69%), Query Frame = 1 

Query: 13  WLIMLLLRSPSWVR---FVGGDDK-KDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGL 72
           W I L++ + + +        DDK KD+ ECT QL GMATCLPYV G AK+PTPDCCSGL
Sbjct: 4   WRISLVVAATALIMATMVAAADDKAKDKAECTEQLVGMATCLPYVQGQAKSPTPDCCSGL 63

Query: 73  KEVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSD 132
           K+V+ +DKKCLCVI++DRNDPDLGLQINV+LAL+LP +CH TA+V+ CPALL++  NS D
Sbjct: 64  KQVINSDKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHVTADVTKCPALLHLDPNSPD 123

Query: 133 AQVFYQLGKGKSSSALAPAPMLS----PSSSPTINSTVGGGSKSGAEGEGYKRG--KKRV 192
           AQVFYQL  G + + LA AP  S     S SPT  S  G G  +   G  + +   K+ +
Sbjct: 124 AQVFYQLANGLNKTGLASAPTGSAPEPTSMSPTAGSDDGKGRTTSLPGSNHAQSFIKRWL 183

Query: 193 ALEILVVVAPLLLLL 198
            LE++     +L+++
Sbjct: 184 GLEVVAHFFVILIII 198

[Close]
BLAST of Cucsa.049910 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-48
Identity = 88/143 (61.54%), Postives = 112/143 (78.32%), Query Frame = 1 

Query: 29  GGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRND 88
           G D  KD+EECT QL GMATCLPYV G AK+PTPDCCSGLK+V+ +D KCLC+I+++RND
Sbjct: 26  GADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERND 85

Query: 89  PDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAPAP 148
           PDLGLQ+NV+LAL+LP +CHATA+++ CPALL++  NS DAQVFYQL KG + +  A AP
Sbjct: 86  PDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGLNETVSASAP 145

Query: 149 MLSPSSSPTINSTVG--GGSKSG 170
             S S   +++ST G   G+ SG
Sbjct: 146 TGSASEPTSMSSTPGSSAGNNSG 168

[Close]
BLAST of Cucsa.049910 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 187.6 bits (475), Expect = 7.5e-48
Identity = 92/142 (64.79%), Postives = 111/142 (78.17%), Query Frame = 1 

Query: 31  DDK-KDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRNDP 90
           DDK KD+EECT QL GMATCLPYV G AK+PTPDCCSGLK+VL ++KKCLCVI++DRNDP
Sbjct: 26  DDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDP 85

Query: 91  DLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAPAPM 150
           DLGLQINV+LAL+LP +CHA A+V+ CPALL++  NS DAQVFYQL KG + +  A AP 
Sbjct: 86  DLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGLNKTGPASAPT 145

Query: 151 LSPSSSPTINSTVGG--GSKSG 170
            S     +I+ T G   G+ SG
Sbjct: 146 GSSPGPISISPTSGSDDGNNSG 167

[Close]
BLAST of Cucsa.049910 vs. TAIR10
Match: AT1G55260.1 (AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 6.8e-33
Identity = 71/172 (41.28%), Postives = 108/172 (62.79%), Query Frame = 1 

Query: 27  FVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDR 86
           F   D  +DREECT QL  ++TC+PYV GDAKAPT DCC+G  +V++  +KC+C++VRD+
Sbjct: 64  FGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDK 123

Query: 87  NDPDLGLQINVTLALSLPDICHATA-NVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALA 146
           +DP LG++IN TLA  LP  CH TA N+++C ++L++P NS+ A+ F  LG+ + +    
Sbjct: 124 DDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFENLGRIEDN---- 183

Query: 147 PAPMLSPSSSPT--INSTVGGGSKSGAEGEGYKRGKKRVALEILVVVAPLLL 196
                  S+SPT       GGG     +  G+K  K  + +E+L+ +   L+
Sbjct: 184 -----YNSTSPTQIHKDGTGGGKAEPVKSNGWKE-KSWLGVELLIYLLVSLI 225

[Close]
BLAST of Cucsa.049910 vs. TAIR10
Match: AT3G58550.1 (AT3G58550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-21
Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 16  MLLLRSPSWVRFVG--GDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLK 75
           ML L     V F+G   +  +D + C   ++ + +CLP+V+  AKAP   CCS LK  +K
Sbjct: 13  MLALCITVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLK--VK 72

Query: 76  NDK----KCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDA 135
            DK    KCLC +V+DR+DP LG +++   A+SLP  CH  AN+S CP LL++  +S  +
Sbjct: 73  IDKGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPAS 132

Query: 136 QVFYQLGKGKSSSALAPAPMLSPSSS 156
           Q+F Q    +SSS       +S SSS
Sbjct: 133 QIFKQF--TESSSQTVGHKAVSTSSS 154

[Close]
BLAST of Cucsa.049910 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.5e-13
Identity = 44/130 (33.85%), Postives = 65/130 (50.00%), Query Frame = 1 

Query: 39  CTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRNDPDLGLQINVT 98
           C   L  ++ CL Y++G++  P+  CCS L  V+K+  +C+C  V +   P++GL IN T
Sbjct: 30  CVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAV-NSPIPNIGLNINRT 89

Query: 99  LALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTI 158
            AL LP+ C    N+   P      +    AQ         S +   P   L+P+S P  
Sbjct: 90  QALQLPNAC----NIQTPPLTQCNAATGPTAQ-----PPAPSPTEKTPDVTLTPTSLPGA 149

Query: 159 NSTVGGGSKS 169
            S VGGGSK+
Sbjct: 150 RSGVGGGSKT 149

[Close]
BLAST of Cucsa.049910 vs. NCBI nr
Match: gi|449436236|ref|XP_004135899.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 1.2e-108
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP 60
           MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP
Sbjct: 1   MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP 60

Query: 61  TPDCCSGLKEVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL 120
           TPDCCSGLKEVL+NDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL
Sbjct: 61  TPDCCSGLKEVLQNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL 120

Query: 121 NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKK 180
           NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKK
Sbjct: 121 NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKK 180

Query: 181 RVALEILVVVAPLLLLL 198
           RVALEILVVVAPLLLLL
Sbjct: 181 RVALEILVVVAPLLLLL 197

[Close]
BLAST of Cucsa.049910 vs. NCBI nr
Match: gi|659122601|ref|XP_008461230.1| (PREDICTED: protein YLS3-like [Cucumis melo])

HSP 1 Score: 318.9 bits (816), Expect = 6.1e-84
Identity = 167/198 (84.34%), Postives = 177/198 (89.39%), Query Frame = 1 

Query: 1   MEGCRRFSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAP 60
           MEG R   FKW +L+MLLLRSPS VRFVGGDDKKD+EECTPQLAGMATCLPYVSGDAK P
Sbjct: 1   MEGFR-LCFKW-FLLMLLLRSPSSVRFVGGDDKKDKEECTPQLAGMATCLPYVSGDAKTP 60

Query: 61  TPDCCSGLKEVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALL 120
           TPDCCSGLKEVLKN+KKCLCVIV+DRNDPDLGLQINVTLAL LPDICHATANVSNCPALL
Sbjct: 61  TPDCCSGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDICHATANVSNCPALL 120

Query: 121 NMPSNSSDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGS-KSGAEGEGYKRGK 180
           N+PSNSS+AQVFYQLGKGKSSSALAPAP++SPSS  TI+STVGGGS KSG    GYK GK
Sbjct: 121 NLPSNSSEAQVFYQLGKGKSSSALAPAPIISPSSPATISSTVGGGSTKSG----GYKIGK 180

Query: 181 KRVALEILVVVAPLLLLL 198
           K V  EILVVV  LLLLL
Sbjct: 181 KWVPSEILVVVVALLLLL 192

[Close]
BLAST of Cucsa.049910 vs. NCBI nr
Match: gi|1009105986|ref|XP_015901383.1| (PREDICTED: protein YLS3-like [Ziziphus jujuba])

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 102/162 (62.96%), Postives = 121/162 (74.69%), Query Frame = 1 

Query: 27  FVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDR 86
           FV  D  KDREECT QLAG+ATCLPYV G+AKAPTPDCCSGLK+VLK++KKCLCVIVRDR
Sbjct: 28  FVMADPAKDREECTQQLAGLATCLPYVDGEAKAPTPDCCSGLKQVLKDNKKCLCVIVRDR 87

Query: 87  NDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSALAP 146
           NDPDLGLQIN TLAL LP +C+A ANVS CP LL+M   S +AQVFYQL K  + +A AP
Sbjct: 88  NDPDLGLQINATLALGLPSVCNAPANVSKCPELLHMDPKSPEAQVFYQLEKNSTGNADAP 147

Query: 147 APMLSPSSSPTINSTVGGGSKSGAEGEGYKRGKKRVALEILV 189
           A   SP++   + ST   G  SG+  +GY  G K +  +IL+
Sbjct: 148 AQ--SPTAGGPV-STKSQGMSSGSRTQGYFSGNKGLGSDILI 186

[Close]
BLAST of Cucsa.049910 vs. NCBI nr
Match: gi|823146656|ref|XP_012473229.1| (PREDICTED: protein YLS3-like [Gossypium raimondii])

HSP 1 Score: 196.8 bits (499), Expect = 3.5e-47
Identity = 99/164 (60.37%), Postives = 124/164 (75.61%), Query Frame = 1 

Query: 12  LWLIMLLLRSPSWVRFVGGD--DKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLK 71
           L L++  +   S    +GGD  + KD+EECT QL G+ATCLPYV G+AKAPTPDCCSGLK
Sbjct: 79  LVLVIATIFMVSAAGVMGGDSGEDKDKEECTEQLVGLATCLPYVGGNAKAPTPDCCSGLK 138

Query: 72  EVLKNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDA 131
           +VLKN+KKCLC+I++DRNDPDLGL INVTLALSLP +C+A AN+S CP LL+M  NS +A
Sbjct: 139 QVLKNNKKCLCIIIKDRNDPDLGLNINVTLALSLPSVCNAPANISKCPELLHMDPNSPEA 198

Query: 132 QVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAEGE 174
           QVFYQL K  SS+      + SP+S+PT  ++VGG   S +EGE
Sbjct: 199 QVFYQLSKSSSSN----GGLQSPASAPT--ASVGGSPISSSEGE 236

[Close]
BLAST of Cucsa.049910 vs. NCBI nr
Match: gi|703107023|ref|XP_010098644.1| (putative GPI-anchored protein [Morus notabilis])

HSP 1 Score: 196.1 bits (497), Expect = 6.0e-47
Identity = 101/173 (58.38%), Postives = 122/173 (70.52%), Query Frame = 1 

Query: 25  VRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVR 84
           V F   D  KDREECT QL G+ATCLPYV G AKAPTPDCCSGLK+VLK++KKCLCV++R
Sbjct: 3   VIFATEDPAKDREECTEQLVGLATCLPYVGGQAKAPTPDCCSGLKQVLKDNKKCLCVVIR 62

Query: 85  DRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLGKGKSSSAL 144
           DRNDPDLGLQINVTLALSLP +C+A ANVS CP LL M  +S +AQVFYQL +  + +  
Sbjct: 63  DRNDPDLGLQINVTLALSLPSVCNAPANVSKCPELLKMDPHSPEAQVFYQLERNSTKTDS 122

Query: 145 APAPMLSPSSSPTINSTVGGGSK--SGAEGEGYKRGKKRVALEILVVVAPLLL 196
            P+P      SP+    + G SK  S + G G + GKKR  LE   ++  +LL
Sbjct: 123 NPSP------SPSAGGHISGKSKGLSASSGSGGRSGKKR--LEWKAIIGSVLL 167

The following BLAST results are available for this feature:
BLAST of Cucsa.049910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YLS3_ARATH2.7e-4761.54Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1[more]
NLTL5_ARATH8.4e-0933.33Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia... [more]
BLAST of Cucsa.049910 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6P6_CUCSA8.5e-10999.49Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_7G430130 PE=4 SV=1[more]
A0A0D2QYL3_GOSRA2.4e-4760.37Uncharacterized protein OS=Gossypium raimondii GN=B456_004G035100 PE=3 SV=1[more]
W9R7Y6_9ROSA4.2e-4758.38Putative GPI-anchored protein OS=Morus notabilis GN=L484_002667 PE=3 SV=1[more]
D7LKY7_ARALL1.6e-4656.32Protease inhibitor/seed storage/lipid transfer protein family protein OS=Arabido... [more]
V4KMF4_EUTSA1.6e-4651.28Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001638mg PE=3 SV=1[more]
BLAST of Cucsa.049910 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44290.11.5e-4861.54 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G44300.17.5e-4864.79 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G55260.16.8e-3341.28 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G58550.13.5e-2140.41 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G48130.13.5e-1333.85 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cucsa.049910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449436236|ref|XP_004135899.1|1.2e-10899.49PREDICTED: protein YLS3 [Cucumis sativus][more]
gi|659122601|ref|XP_008461230.1|6.1e-8484.34PREDICTED: protein YLS3-like [Cucumis melo][more]
gi|1009105986|ref|XP_015901383.1|1.1e-4862.96PREDICTED: protein YLS3-like [Ziziphus jujuba][more]
gi|823146656|ref|XP_012473229.1|3.5e-4760.37PREDICTED: protein YLS3-like [Gossypium raimondii][more]
gi|703107023|ref|XP_010098644.1|6.0e-4758.38putative GPI-anchored protein [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008289 lipid binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.049910.1Cucsa.049910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 32..116
score: 4.0
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 39..116
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 38..117
score: 4.25
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 38..117
score: 9.8
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 25..188
score: 2.3
NoneNo IPR availablePANTHERPTHR33044:SF21PROTEIN YLS3coord: 25..188
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.049910Cla003174Watermelon (97103) v1cgywmB033
Cucsa.049910Cla015287Watermelon (97103) v1cgywmB031
Cucsa.049910Csa7G430130Cucumber (Chinese Long) v2cgycuB031
Cucsa.049910MELO3C023502Melon (DHL92) v3.5.1cgymeB029
Cucsa.049910ClCG09G003660Watermelon (Charleston Gray)cgywcgB033
Cucsa.049910CSPI07G19710Wild cucumber (PI 183967)cgycpiB032
Cucsa.049910CmaCh20G000380Cucurbita maxima (Rimu)cgycmaB0051
Cucsa.049910CmaCh08G005630Cucurbita maxima (Rimu)cgycmaB0052
Cucsa.049910CmoCh10G010220Cucurbita moschata (Rifu)cgycmoB0045
Cucsa.049910CmoCh08G005550Cucurbita moschata (Rifu)cgycmoB0047
Cucsa.049910Lsi02G026260Bottle gourd (USVL1VR-Ls)cgylsiB030
Cucsa.049910Lsi06G004480Bottle gourd (USVL1VR-Ls)cgylsiB032
Cucsa.049910Cp4.1LG16g09240Cucurbita pepo (Zucchini)cgycpeB0047
Cucsa.049910Cp4.1LG17g08370Cucurbita pepo (Zucchini)cgycpeB0048
Cucsa.049910Cp4.1LG18g01320Cucurbita pepo (Zucchini)cgycpeB0049
Cucsa.049910MELO3C023502.2Melon (DHL92) v3.6.1cgymedB027
Cucsa.049910CsaV3_1G042180Cucumber (Chinese Long) v3cgycucB031
Cucsa.049910Cla97C03G064230Watermelon (97103) v2cgywmbB029
Cucsa.049910Cla97C09G165920Watermelon (97103) v2cgywmbB030
Cucsa.049910Bhi09G000475Wax gourdcgywgoB034
Cucsa.049910Carg16971Silver-seed gourdcarcgyB0537
Cucsa.049910Carg06943Silver-seed gourdcarcgyB0593
Cucsa.049910Carg13478Silver-seed gourdcarcgyB0519
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.049910Cucsa.142800Cucumber (Gy14) v1cgycgyB010
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.049910Cucurbita maxima (Rimu)cgycmaB0050
Cucsa.049910Cucurbita moschata (Rifu)cgycmoB0046
Cucsa.049910Wild cucumber (PI 183967)cgycpiB031
Cucsa.049910Cucumber (Chinese Long) v2cgycuB030
Cucsa.049910Cucurbita pepo (Zucchini)cgycpeB0046
Cucsa.049910Silver-seed gourdcarcgyB0413
Cucsa.049910Cucumber (Chinese Long) v3cgycucB033