CmoCh08G005550 (gene) Cucurbita moschata (Rifu)

NameCmoCh08G005550
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProtease inhibitor/seed storage/lipid transfer protein family protein
LocationCmo_Chr08 : 3410305 .. 3411552 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAGAAAATGGGCTTTCATTTTGCTTGCAAATGGCTTTTGTTAGCACTCCTGTTAGCCTCACCGGCGGTGAGCTTTATTGCAGGAGATGCAGAGAAAGACAGGGAGGAATGCACGCAGCAATTGGCTGGAATGGCGACGTGTCTAGCGTACGTGAGCGGTGACGCAAAGGCTCCAACGCCGGACTGTTGCAGTGGGCTGAAGGGCGTGCTTAAAAGCAACAAGAAATGCCTGTGCGTTATAGTGAAAGACCGAAATGACCCTGACTTGGGGCTTCAGATTAATGTCACCCTTGCCTTGGGCCTGCCTGATGTCTGCCACGCCCCTGCCAATGTCTCCAATTGTCCTGGTAACTACTCCGCGTTCTTCGTGTTCTTCGTGTTCTTCGTGTTCTTCGTGTTCTTCTTTTAAATGGGGTTGTTGCAGCTCTATTAAACTTGCCGCCCAGTTCACCGGAGGCTCAAGTTTTCTATCAATTTGGCAAGGCGCAAAGCTCCTCTGCTGCTGCAGCTCCCATAAGTCCTTCTCCGGCCATTAGCTCCACTGGTAATTTGATGATCAATTTTCTACAGTTTTTTTTTAGTTTGGAAAGCAAAATTAAGGTGTTGTTCTTTAAAATTGCAGGTGGAGGAGGCAGTAGAAATGGAACAGATAAGGGGGAAGCTTACACCATTGGAAACAAATGGCTGCCATTGAAGAGTTTGGTTGTTGCAGCTCTTTTGGTTTTGTTTTTGTTGGATTCTTAAACTGTTTTGAGTATATTATTCATGATTTTATTGTGTTCTGTTCCAATATTAGTATTGTAATTCGTGTTTTTAAACGGTTGTTTGGAGTTGGAGATGGAATATATGTCCAGAGCGTCAAATTTGGGACCAATAAAGTAACATAGCGTTTACGTGATAACAACAATAAAATTTGTTTGAGGAGACGAGGACTCGTGATGCTTGACCACCCACAAAGCTCAAATACTTATGTTAGTTAGAGGGTTAGGAAAAGGTATTGAAATTGGATGAAAATATATCTATGTGTAAATTAGGGTTGACTAGGATCATACGAACAGAGAGAATGTTGGGTTCGGGTCTCTTGTGAGGTAGACCCTAGGGTTGGCCTCTGCCTCAAGGAACTTGGGCTTTGACCCAGTTTCGTTTTTACTTTCGTGTTTGGTGGTTCGGTTTCTTTTATATCACGATTTAGTTTAATTTGTATATCACTTTTTTTATTTTTTTTTATTTAGTTTTTTAATTTTTCG

mRNA sequence

CACAGAAAATGGGCTTTCATTTTGCTTGCAAATGGCTTTTGTTAGCACTCCTGTTAGCCTCACCGGCGGTGAGCTTTATTGCAGGAGATGCAGAGAAAGACAGGGAGGAATGCACGCAGCAATTGGCTGGAATGGCGACGTGTCTAGCGTACGTGAGCGGTGACGCAAAGGCTCCAACGCCGGACTGTTGCAGTGGGCTGAAGGGCGTGCTTAAAAGCAACAAGAAATGCCTGTGCGTTATAGTGAAAGACCGAAATGACCCTGACTTGGGGCTTCAGATTAATGTCACCCTTGCCTTGGGCCTGCCTGATGTCTGCCACGCCCCTGCCAATGTCTCCAATTGTCCTGCTCTATTAAACTTGCCGCCCAGTTCACCGGAGGCTCAAGTTTTCTATCAATTTGGCAAGGCGCAAAGCTCCTCTGCTGCTGCAGCTCCCATAAGTCCTTCTCCGGCCATTAGCTCCACTGGTGGAGGAGGCAGTAGAAATGGAACAGATAAGGGGGAAGCTTACACCATTGGAAACAAATGGCTGCCATTGAAGAGTTTGGTTGTTGCAGCTCTTTTGGTTTTGTTTTTGTTGGATTCTTAAACTGTTTTGAGTATATTATTCATGATTTTATTGTGTTCTGTTCCAATATTAGTATTGTAATTCGTGTTTTTAAACGGTTGTTTGGAGTTGGAGATGGAATATATGTCCAGAGCGTCAAATTTGGGACCAATAAAGTAACATAGCGTTTACGTGATAACAACAATAAAATTTGTTTGAGGAGACGAGGACTCGTGATGCTTGACCACCCACAAAGCTCAAATACTTATGTTAGTTAGAGGGTTAGGAAAAGGTATTGAAATTGGATGAAAATATATCTATGTGTAAATTAGGGTTGACTAGGATCATACGAACAGAGAGAATGTTGGGTTCGGGTCTCTTGTGAGGTAGACCCTAGGGTTGGCCTCTGCCTCAAGGAACTTGGGCTTTGACCCAGTTTCGTTTTTACTTTCGTGTTTGGTGGTTCGGTTTCTTTTATATCACGATTTAGTTTAATTTGTATATCACTTTTTTTATTTTTTTTTATTTAGTTTTTTAATTTTTCG

Coding sequence (CDS)

ATGGGCTTTCATTTTGCTTGCAAATGGCTTTTGTTAGCACTCCTGTTAGCCTCACCGGCGGTGAGCTTTATTGCAGGAGATGCAGAGAAAGACAGGGAGGAATGCACGCAGCAATTGGCTGGAATGGCGACGTGTCTAGCGTACGTGAGCGGTGACGCAAAGGCTCCAACGCCGGACTGTTGCAGTGGGCTGAAGGGCGTGCTTAAAAGCAACAAGAAATGCCTGTGCGTTATAGTGAAAGACCGAAATGACCCTGACTTGGGGCTTCAGATTAATGTCACCCTTGCCTTGGGCCTGCCTGATGTCTGCCACGCCCCTGCCAATGTCTCCAATTGTCCTGCTCTATTAAACTTGCCGCCCAGTTCACCGGAGGCTCAAGTTTTCTATCAATTTGGCAAGGCGCAAAGCTCCTCTGCTGCTGCAGCTCCCATAAGTCCTTCTCCGGCCATTAGCTCCACTGGTGGAGGAGGCAGTAGAAATGGAACAGATAAGGGGGAAGCTTACACCATTGGAAACAAATGGCTGCCATTGAAGAGTTTGGTTGTTGCAGCTCTTTTGGTTTTGTTTTTGTTGGATTCTTAA
BLAST of CmoCh08G005550 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.8e-43
Identity = 95/191 (49.74%), Postives = 126/191 (65.97%), Query Frame = 1

Query: 12  LALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLKSN 71
           +AL++ +  V     D  KD+EECT QL GMATCL YV G AK+PTPDCCSGLK V+ S+
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 72  KKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQF 131
            KCLC+I+++RNDPDLGLQ+NV+LAL LP VCHA A+++ CPALL+L P+SP+AQVFYQ 
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 132 GK----AQSSSAAAAPISPSPAISSTGGGGSRNGTDK-------GEAYTIGNKWLPLKSL 191
            K      S+SA     S   ++SST G  + N + +         A +   +WL L+  
Sbjct: 133 AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLE-- 192

BLAST of CmoCh08G005550 vs. Swiss-Prot
Match: LTPG1_ARATH (Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LTPG1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 1

Query: 10  LLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLK 69
           L+   ++AS A +  A       +EC Q    +  CL + +G A  P+  CC  ++ + +
Sbjct: 10  LVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKE 69

Query: 70  SNKKCLCVIVKDRND-----PDLGLQINVTLALGLPDVCHA-PANVSNCPALLNLPPSSP 129
            + KCLC +++          DLG+Q +  +   LP  C    A+++NCP LL + PSSP
Sbjct: 70  RDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQ--LPTSCQLHNASITNCPKLLGISPSSP 129

Query: 130 EAQVFYQFGKAQSSSAAAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLKSLVVA 189
           +A VF     A ++  A A  SP+   +ST  GGS +  D G A         + +L VA
Sbjct: 130 DAAVF--TNNATTTPVAPAGKSPATPATSTDKGGSASAKD-GHA---------VVALAVA 183

Query: 190 ALLVLFLL 192
            + V F+L
Sbjct: 190 LMAVSFVL 183

BLAST of CmoCh08G005550 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.8e-08
Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = 1

Query: 10  LLLALLLASPAVSFIAGD-----AEKDREECTQQLAGMATCLAYVS--GDAKAPTPDCCS 69
           L L +LL+  +VS +        A     +C+  +  MA CL++VS  G    P   CCS
Sbjct: 13  LFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCS 72

Query: 70  GLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVC--HAPANVSNCPALLNLPP 129
           GLK VLK++ +CLC   K  +   LG+ +N+T A  LP  C  HAP +++ C   L++ P
Sbjct: 73  GLKTVLKADSQCLCEAFK--SSASLGVTLNITKASTLPAACKLHAP-SIATCG--LSVAP 132

Query: 130 SSPEAQVFYQFGKAQSSSAAAAPISPSPAISSTGGGGS 159
           S+         G A +    A  ++P+P   S+G  GS
Sbjct: 133 STAPG---LAPGVAAAGPETAGFLAPNP---SSGNDGS 159

BLAST of CmoCh08G005550 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-07
Identity = 41/147 (27.89%), Postives = 69/147 (46.94%), Query Frame = 1

Query: 14  LLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPD--CCSGLKGVLKSN 73
           +L+    V+ ++G+      +C+  +  MA CL++V+  +    P+  CCSGLK V+++ 
Sbjct: 6   ILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTG 65

Query: 74  KKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQF 133
            +CLC   K  N   LGL ++++ A  LP VC   A           PPS+         
Sbjct: 66  PECLCEAFK--NSGSLGLTLDLSKAASLPSVCKVAA-----------PPSA--------- 125

Query: 134 GKAQSSSAAAAPISPSPAISSTGGGGS 159
                 S +  P + +P +S T G G+
Sbjct: 126 --RCGLSVSGDPPATAPGLSPTAGAGA 128

BLAST of CmoCh08G005550 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.2e-06
Identity = 47/162 (29.01%), Postives = 72/162 (44.44%), Query Frame = 1

Query: 34  ECTQQLAGMATCLAYVS----GDAKAPTPDCCSGLKGVLKSNKKCLCVIVKDRNDPDLGL 93
           +C   L  M  CL+YV+    G A  P   CC  L G+++S+ +CLC ++       LG+
Sbjct: 37  DCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGI 96

Query: 94  QINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQFGKAQSSSAAAAPISPSPA 153
           +I+   AL LP VC       +  +L  +P  +P A         + +S A AP S S A
Sbjct: 97  KIDKAKALKLPGVCGVITPDPSLCSLFGIPVGAPVAM------GDEGASPAYAPGSMSGA 156

Query: 154 ISSTGGGGSRNGTDKGEAYTIGNKWLPLKSLVVAALLVLFLL 192
             S GG GS     +G        +    +L++  L   F +
Sbjct: 157 -ESPGGFGSGPSASRGSDAPSSAPYSLFLNLIIFPLAFAFYI 191

BLAST of CmoCh08G005550 vs. TrEMBL
Match: A0A0A0K6P6_CUCSA (Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_7G430130 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-60
Identity = 133/192 (69.27%), Postives = 155/192 (80.73%), Query Frame = 1

Query: 5   FACKWL-LLALLLASPA-VSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCS 64
           F+ KWL L+ LLL SP+ V F+ GD +KDREECT QLAGMATCL YVSGDAKAPTPDCCS
Sbjct: 7   FSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCS 66

Query: 65  GLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSS 124
           GLK VL+++KKCLCVIV+DRNDPDLGLQINVTLAL LPD+CHA ANVSNCPALLN+P +S
Sbjct: 67  GLKEVLQNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNS 126

Query: 125 PEAQVFYQFGKAQSSSA-AAAPI---SPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLK 184
            +AQVFYQ GK +SSSA A AP+   S SP I+ST GGGS++G + GE Y  G K + L+
Sbjct: 127 SDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAE-GEGYKRGKKRVALE 186

Query: 185 SLVVAALLVLFL 191
            LVV A L+L L
Sbjct: 187 ILVVVAPLLLLL 197

BLAST of CmoCh08G005550 vs. TrEMBL
Match: D7TNT3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00090 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 7.4e-49
Identity = 104/188 (55.32%), Postives = 132/188 (70.21%), Query Frame = 1

Query: 1   MGFHFACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60
           MG H  C +++L ++  S  ++ +  D+ KD++ECT+QL GMATCL YV GDAKAPTPDC
Sbjct: 1   MGSH--CTFMILVIV--SMVITCVTSDSAKDKQECTEQLVGMATCLPYVGGDAKAPTPDC 60

Query: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 120
           CSGLK VL+ NKKCLCVI+KDRNDPDLGL +N TLALGLP VCHAPANVS CPALL+L P
Sbjct: 61  CSGLKQVLQKNKKCLCVIIKDRNDPDLGLNLNATLALGLPSVCHAPANVSQCPALLHLAP 120

Query: 121 SSPEAQVFYQFGKAQSSSAAAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLKSL 180
           +SP+AQVFYQF  + + +A++   +PS   S++    +  G         G KWL L+  
Sbjct: 121 NSPDAQVFYQFANSSNGTASS---TPSTVKSNSSASANSKGVSAQGGCCNGKKWLNLEFA 180

Query: 181 VVAALLVL 189
           V   LL L
Sbjct: 181 VGGTLLWL 181

BLAST of CmoCh08G005550 vs. TrEMBL
Match: A0A067DWS7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029183mg PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.2e-48
Identity = 105/193 (54.40%), Postives = 133/193 (68.91%), Query Frame = 1

Query: 11  LLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLKS 70
           +L ++L   + S    D  KDREECT QL G++TCL YV GDAKAPTPDCCSGLK VLK+
Sbjct: 1   MLVIVLMMISSSGTMADKAKDREECTNQLVGLSTCLPYVGGDAKAPTPDCCSGLKQVLKN 60

Query: 71  NKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQ 130
           +KKCLCVI++DRNDP+LGL INVTLALGLP VCHAPANVS CPALL+L P+SPEAQVFYQ
Sbjct: 61  DKKCLCVIIRDRNDPELGLNINVTLALGLPSVCHAPANVSQCPALLHLDPNSPEAQVFYQ 120

Query: 131 FGKAQSSSAAAAPISPSPAISSTGGGGSR------NGTDKG-------EAYTIGNKWLPL 190
           FG+  SS       +P+P+ ++ GGGG        +  ++G       +   IGN+W  L
Sbjct: 121 FGRNPSSPHTVITSTPTPSPTAAGGGGKNPISADSSSNNRGARVQGTSDGCCIGNRWSGL 180

BLAST of CmoCh08G005550 vs. TrEMBL
Match: A5B703_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_016657 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-47
Identity = 92/143 (64.34%), Postives = 115/143 (80.42%), Query Frame = 1

Query: 1   MGFHFACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60
           MG H  C +++L ++  S  ++ +  D+ KD++ECT+QL GMATCL YV GDAKAPTPDC
Sbjct: 1   MGSH--CTFMILVIV--SMVITCVTSDSAKDKQECTEQLVGMATCLPYVGGDAKAPTPDC 60

Query: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 120
           CSGLK VL+ NKKCLCVI+KDRNDPDLGL +N TLALGLP VCHAPANVS CPALL+L P
Sbjct: 61  CSGLKQVLQKNKKCLCVIIKDRNDPDLGLNLNATLALGLPSVCHAPANVSQCPALLHLAP 120

Query: 121 SSPEAQVFYQFGKAQSSSAAAAP 144
           +SP+AQVFYQF  + + +A++ P
Sbjct: 121 NSPDAQVFYQFANSSNGTASSTP 139

BLAST of CmoCh08G005550 vs. TrEMBL
Match: V4TQU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033694mg PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.1e-47
Identity = 103/192 (53.65%), Postives = 130/192 (67.71%), Query Frame = 1

Query: 1   MGFH-FACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPD 60
           MG H      ++L ++L   + S    D  KD+EECT QL G++TCL YV GDAKAPTPD
Sbjct: 1   MGLHNLLVTIIMLVIVLMMISSSGTMADKAKDKEECTNQLVGLSTCLPYVGGDAKAPTPD 60

Query: 61  CCSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLP 120
           CCSGLK VLK++KKCLCVI++D NDP+LGL INVTL LGLP VCHA ANVS CPALL+L 
Sbjct: 61  CCSGLKQVLKNDKKCLCVIIRDMNDPELGLNINVTLTLGLPSVCHATANVSQCPALLHLD 120

Query: 121 PSSPEAQVFYQFGKAQSSSAAAAPISPSPAISSTGGGGSR------NGTDKG-------E 179
           P+SPEAQVFYQFG+  SS   A   +P+P+ ++ GGGG        +  ++G       +
Sbjct: 121 PNSPEAQVFYQFGRNPSSPHTAITSTPAPSPTAAGGGGKNPISADSSSNNRGARVQGTSD 180

BLAST of CmoCh08G005550 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-46
Identity = 103/191 (53.93%), Postives = 128/191 (67.02%), Query Frame = 1

Query: 12  LALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLKSN 71
           +AL++ +  V+  A D  KD+EECT+QL GMATCL YV G AK+PTPDCCSGLK VL SN
Sbjct: 13  IALIVVAMVVA-AADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSN 72

Query: 72  KKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQF 131
           KKCLCVI++DRNDPDLGLQINV+LAL LP VCHA A+V+ CPALL+L P+SP+AQVFYQ 
Sbjct: 73  KKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQL 132

Query: 132 GKAQSSSAAAA--------PISPSPAISSTGGGGSRNGTD---KGEAYTIGNKWLPLKSL 191
            K  + +  A+        PIS SP   S  G  S   T    +  A +   +WL L+  
Sbjct: 133 AKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLGLE-- 192

BLAST of CmoCh08G005550 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 177.2 bits (448), Expect = 9.9e-45
Identity = 95/191 (49.74%), Postives = 126/191 (65.97%), Query Frame = 1

Query: 12  LALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLKSN 71
           +AL++ +  V     D  KD+EECT QL GMATCL YV G AK+PTPDCCSGLK V+ S+
Sbjct: 13  IALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSD 72

Query: 72  KKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQF 131
            KCLC+I+++RNDPDLGLQ+NV+LAL LP VCHA A+++ CPALL+L P+SP+AQVFYQ 
Sbjct: 73  MKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQL 132

Query: 132 GK----AQSSSAAAAPISPSPAISSTGGGGSRNGTDK-------GEAYTIGNKWLPLKSL 191
            K      S+SA     S   ++SST G  + N + +         A +   +WL L+  
Sbjct: 133 AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLE-- 192

BLAST of CmoCh08G005550 vs. TAIR10
Match: AT1G55260.1 (AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 9.0e-30
Identity = 66/181 (36.46%), Postives = 109/181 (60.22%), Query Frame = 1

Query: 10  LLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLK 69
           L + +++ S  + F   D  +DREECT QL  ++TC+ YV GDAKAPT DCC+G   V++
Sbjct: 51  LFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIR 110

Query: 70  SNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPA-NVSNCPALLNLPPSSPEAQVF 129
            ++KC+C++V+D++DP LG++IN TLA  LP  CH  A N+++C ++L+LP +S  A+ F
Sbjct: 111 KSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEF 170

Query: 130 YQFGKAQSSSAAAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLKSLVVAALLVL 189
              G+ + +  + +P      I   G GG +    K   +     WL ++ L+   + ++
Sbjct: 171 ENLGRIEDNYNSTSPTQ----IHKDGTGGGKAEPVKSNGWK-EKSWLGVELLIYLLVSLI 226

BLAST of CmoCh08G005550 vs. TAIR10
Match: AT3G58550.1 (AT3G58550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 1.9e-24
Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1

Query: 11  LLALLLASPAVSFIAGDAE--KDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVL 70
           +LAL + + AV F+   +E  +D + C   ++ + +CL +V+  AKAP   CCS LK  +
Sbjct: 13  MLALCI-TVAVMFLGVRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKI 72

Query: 71  KSN--KKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQ 130
                +KCLC +VKDR+DP LG +++   A+ LP  CH PAN+S CP LL+L P SP +Q
Sbjct: 73  DKGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQ 132

Query: 131 VFYQFGKAQSSSAAAAPISPSPAI 151
           +F QF ++ S +     +S S +I
Sbjct: 133 IFKQFTESSSQTVGHKAVSTSSSI 155

BLAST of CmoCh08G005550 vs. TAIR10
Match: AT1G27950.1 (AT1G27950.1 glycosylphosphatidylinositol-anchored lipid protein transfer 1)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 1

Query: 10  LLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLK 69
           L+   ++AS A +  A       +EC Q    +  CL + +G A  P+  CC  ++ + +
Sbjct: 10  LVTMTIVASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKE 69

Query: 70  SNKKCLCVIVKDRND-----PDLGLQINVTLALGLPDVCHA-PANVSNCPALLNLPPSSP 129
            + KCLC +++          DLG+Q +  +   LP  C    A+++NCP LL + PSSP
Sbjct: 70  RDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQ--LPTSCQLHNASITNCPKLLGISPSSP 129

Query: 130 EAQVFYQFGKAQSSSAAAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLKSLVVA 189
           +A VF     A ++  A A  SP+   +ST  GGS +  D G A         + +L VA
Sbjct: 130 DAAVF--TNNATTTPVAPAGKSPATPATSTDKGGSASAKD-GHA---------VVALAVA 183

Query: 190 ALLVLFLL 192
            + V F+L
Sbjct: 190 LMAVSFVL 183

BLAST of CmoCh08G005550 vs. NCBI nr
Match: gi|659122601|ref|XP_008461230.1| (PREDICTED: protein YLS3-like [Cucumis melo])

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-63
Identity = 141/194 (72.68%), Postives = 152/194 (78.35%), Query Frame = 1

Query: 2   GFHFACKWLLLALLLASPA-VSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 61
           GF    KW LL LLL SP+ V F+ GD +KD+EECT QLAGMATCL YVSGDAK PTPDC
Sbjct: 3   GFRLCFKWFLLMLLLRSPSSVRFVGGDDKKDKEECTPQLAGMATCLPYVSGDAKTPTPDC 62

Query: 62  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 121
           CSGLK VLK+NKKCLCVIVKDRNDPDLGLQINVTLALGLPD+CHA ANVSNCPALLNLP 
Sbjct: 63  CSGLKEVLKNNKKCLCVIVKDRNDPDLGLQINVTLALGLPDICHATANVSNCPALLNLPS 122

Query: 122 SSPEAQVFYQFGKAQSSSA-AAAP-ISP-SPA-ISSTGGGGSRNGTDKGEAYTIGNKWLP 181
           +S EAQVFYQ GK +SSSA A AP ISP SPA ISST GGGS     K   Y IG KW+P
Sbjct: 123 NSSEAQVFYQLGKGKSSSALAPAPIISPSSPATISSTVGGGS----TKSGGYKIGKKWVP 182

Query: 182 LKSLVVAALLVLFL 191
            + LVV   L+L L
Sbjct: 183 SEILVVVVALLLLL 192

BLAST of CmoCh08G005550 vs. NCBI nr
Match: gi|449436236|ref|XP_004135899.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 2.7e-60
Identity = 133/192 (69.27%), Postives = 155/192 (80.73%), Query Frame = 1

Query: 5   FACKWL-LLALLLASPA-VSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCS 64
           F+ KWL L+ LLL SP+ V F+ GD +KDREECT QLAGMATCL YVSGDAKAPTPDCCS
Sbjct: 7   FSFKWLWLIMLLLRSPSWVRFVGGDDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCS 66

Query: 65  GLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSS 124
           GLK VL+++KKCLCVIV+DRNDPDLGLQINVTLAL LPD+CHA ANVSNCPALLN+P +S
Sbjct: 67  GLKEVLQNDKKCLCVIVRDRNDPDLGLQINVTLALSLPDICHATANVSNCPALLNMPSNS 126

Query: 125 PEAQVFYQFGKAQSSSA-AAAPI---SPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLK 184
            +AQVFYQ GK +SSSA A AP+   S SP I+ST GGGS++G + GE Y  G K + L+
Sbjct: 127 SDAQVFYQLGKGKSSSALAPAPMLSPSSSPTINSTVGGGSKSGAE-GEGYKRGKKRVALE 186

Query: 185 SLVVAALLVLFL 191
            LVV A L+L L
Sbjct: 187 ILVVVAPLLLLL 197

BLAST of CmoCh08G005550 vs. NCBI nr
Match: gi|225450281|ref|XP_002270671.1| (PREDICTED: protein YLS3 [Vitis vinifera])

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 104/188 (55.32%), Postives = 132/188 (70.21%), Query Frame = 1

Query: 1   MGFHFACKWLLLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDC 60
           MG H  C +++L ++  S  ++ +  D+ KD++ECT+QL GMATCL YV GDAKAPTPDC
Sbjct: 1   MGSH--CTFMILVIV--SMVITCVTSDSAKDKQECTEQLVGMATCLPYVGGDAKAPTPDC 60

Query: 61  CSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPP 120
           CSGLK VL+ NKKCLCVI+KDRNDPDLGL +N TLALGLP VCHAPANVS CPALL+L P
Sbjct: 61  CSGLKQVLQKNKKCLCVIIKDRNDPDLGLNLNATLALGLPSVCHAPANVSQCPALLHLAP 120

Query: 121 SSPEAQVFYQFGKAQSSSAAAAPISPSPAISSTGGGGSRNGTDKGEAYTIGNKWLPLKSL 180
           +SP+AQVFYQF  + + +A++   +PS   S++    +  G         G KWL L+  
Sbjct: 121 NSPDAQVFYQFANSSNGTASS---TPSTVKSNSSASANSKGVSAQGGCCNGKKWLNLEFA 180

Query: 181 VVAALLVL 189
           V   LL L
Sbjct: 181 VGGTLLWL 181

BLAST of CmoCh08G005550 vs. NCBI nr
Match: gi|641826827|gb|KDO46035.1| (hypothetical protein CISIN_1g029183mg [Citrus sinensis])

HSP 1 Score: 200.3 bits (508), Expect = 3.1e-48
Identity = 105/193 (54.40%), Postives = 133/193 (68.91%), Query Frame = 1

Query: 11  LLALLLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTPDCCSGLKGVLKS 70
           +L ++L   + S    D  KDREECT QL G++TCL YV GDAKAPTPDCCSGLK VLK+
Sbjct: 1   MLVIVLMMISSSGTMADKAKDREECTNQLVGLSTCLPYVGGDAKAPTPDCCSGLKQVLKN 60

Query: 71  NKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNLPPSSPEAQVFYQ 130
           +KKCLCVI++DRNDP+LGL INVTLALGLP VCHAPANVS CPALL+L P+SPEAQVFYQ
Sbjct: 61  DKKCLCVIIRDRNDPELGLNINVTLALGLPSVCHAPANVSQCPALLHLDPNSPEAQVFYQ 120

Query: 131 FGKAQSSSAAAAPISPSPAISSTGGGGSR------NGTDKG-------EAYTIGNKWLPL 190
           FG+  SS       +P+P+ ++ GGGG        +  ++G       +   IGN+W  L
Sbjct: 121 FGRNPSSPHTVITSTPTPSPTAAGGGGKNPISADSSSNNRGARVQGTSDGCCIGNRWSGL 180

BLAST of CmoCh08G005550 vs. NCBI nr
Match: gi|1000981328|ref|XP_002512201.2| (PREDICTED: protein YLS3 [Ricinus communis])

HSP 1 Score: 199.9 bits (507), Expect = 4.0e-48
Identity = 96/149 (64.43%), Postives = 119/149 (79.87%), Query Frame = 1

Query: 1   MGFHFACKWLLLAL--LLASPAVSFIAGDAEKDREECTQQLAGMATCLAYVSGDAKAPTP 60
           MG H+    ++L L  +L S    F   DA+KD+EEC +QL G+ATCL YV G+AK+PTP
Sbjct: 1   MGLHYKKFGVILGLTLVLMSTMAGFAMADADKDKEECAEQLVGLATCLPYVGGNAKSPTP 60

Query: 61  DCCSGLKGVLKSNKKCLCVIVKDRNDPDLGLQINVTLALGLPDVCHAPANVSNCPALLNL 120
           DCC+GLK VLK+NKKCLCV++KDRNDPDLGL+INVTLALGLP VCHA ANVS CPALL+L
Sbjct: 61  DCCTGLKEVLKNNKKCLCVVIKDRNDPDLGLKINVTLALGLPTVCHATANVSQCPALLHL 120

Query: 121 PPSSPEAQVFYQFGKAQSSSAAAAPISPS 148
            P+SP+AQVFYQF K+ + SA++  +SPS
Sbjct: 121 APNSPDAQVFYQFTKSSNQSASSPALSPS 149

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YLS3_ARATH1.8e-4349.74Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1[more]
LTPG1_ARATH1.8e-1130.85Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LT... [more]
NLTL5_ARATH1.8e-0833.54Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia... [more]
NLTL2_ARATH2.6e-0727.89Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia... [more]
LTPG2_ARATH2.2e-0629.01Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT... [more]
Match NameE-valueIdentityDescription
A0A0A0K6P6_CUCSA1.9e-6069.27Non-specific lipid-transfer protein OS=Cucumis sativus GN=Csa_7G430130 PE=4 SV=1[more]
D7TNT3_VITVI7.4e-4955.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0156g00090 PE=3 SV=... [more]
A0A067DWS7_CITSI2.2e-4854.40Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029183mg PE=4 SV=1[more]
A5B703_VITVI1.4e-4764.34Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_016657 P... [more]
V4TQU7_9ROSI4.1e-4753.65Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033694mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G44300.11.4e-4653.93 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G44290.19.9e-4549.74 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G55260.19.0e-3036.46 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G58550.11.9e-2440.28 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G27950.11.0e-1230.85 glycosylphosphatidylinositol-anchored lipid protein transfer 1[more]
Match NameE-valueIdentityDescription
gi|659122601|ref|XP_008461230.1|2.0e-6372.68PREDICTED: protein YLS3-like [Cucumis melo][more]
gi|449436236|ref|XP_004135899.1|2.7e-6069.27PREDICTED: protein YLS3 [Cucumis sativus][more]
gi|225450281|ref|XP_002270671.1|1.1e-4855.32PREDICTED: protein YLS3 [Vitis vinifera][more]
gi|641826827|gb|KDO46035.1|3.1e-4854.40hypothetical protein CISIN_1g029183mg [Citrus sinensis][more]
gi|1000981328|ref|XP_002512201.2|4.0e-4864.43PREDICTED: protein YLS3 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000528Plant_LTP
IPR016140Bifunc_inhib/LTP/seed_store
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0006508 proteolysis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008289 lipid binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh08G005550.1CmoCh08G005550.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 90..107
score: 4.9E-5coord: 55..69
score: 4.9E-5coord: 34..50
score: 4.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 22..112
score: 2.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 35..112
score: 1.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 34..113
score: 1.33
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 34..113
score: 3.8
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 11..189
score: 1.2
NoneNo IPR availablePANTHERPTHR33044:SF21PROTEIN YLS3coord: 11..189
score: 1.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh08G005550CmoCh10G010220Cucurbita moschata (Rifu)cmocmoB078
CmoCh08G005550CmoCh02G012420Cucurbita moschata (Rifu)cmocmoB447