Cucsa.044770 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.044770
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTransmembrane protein, putative
Locationscaffold00542 : 964734 .. 966057 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTCTCTTCGTTACAAAATTTCATTCGTATCCCTACCTCATTGATTTCAATCCCAAACTCCAAAAATCTCAACGCTGCTGCCTCTTTTCACACCACAATTAATAATAGCTACCTCCCTCCCCAGCTGCTCTCGACCAAGCGTCGTCGTCCAGCGGCCTCTTTGTGCATACAATGCCATGGTGGTGGTTTTTTTtCAATGGACGATGATGACAGCAGTGATAATGAAGGCCCTCTCGAAACAATCAACAAAGTTTACAAAAGTATAAAGAAGAAAGACGTTGCTAAGTTGGCTAATGTAATAGCTGATCAACGTCCAGATATCGTGGATTCCATACCTTTTCTTCGAACCAGGCTGGTAAATTTTATTATTATTGAAGTTTTGGTGATTGAGTGTATTAAACATTAATAAATATATACATATGTGTTGTTGTTGTTGTTATGTTGGTCAGAAAATGAGGAAGCTGGCGTCTCATATCATAAAGGGATTACAAGAGAACCTTGTGTTTTCAATCCAACCAACAACAAAAGATGGATCAATGGTGGGCATTATATGGAAAGTAGGTACATATTCTAAAACTAAAACCCACACCTTCAATTTGTTTTCTTTTTCTAATTGACACCAAATTCTTTTAGTGCTTAAAGAGTAACCCACTTGTGCCTTTAATTTATAACTATTTTCATATTATCCTACTTTGAAACATGAGTTCATGTAGCACACAATAAATGAAAAACCTGCCAAGAATTCGAATTCGTCTTACTACTTAAGTATATGGACAAATTTTCCTTTTACCACATGCAAAAAGTCATATTTTGATATATATGGGTAGATAGTAGTAGTTTCATTTTTAGGCTATATTATGAAATTGACGATGATTTTTTCTCGGTCTCTTATTATTGTTTTTTACTATCATTTATCAATCTAATTTTCTAAGGTTGGTTTGATTTTATGAACGGATGTTTTTTTTTTtGTAAATTTAATTATTAACAAATATAGTTACAAAACAAAACCTAAATGATCCATCGTTGATGACAATGGTAGGTTGGAACAAACCGCTAATAAAAATTAAAGAAGGAATCACTATCCATTTTCACCATAGCTATGTTGGAATGTTATTGATTGGGTATGTATTCAACCAAAAAaTATATATTATTTTTtAAAAAAAaCGTATCTTCTCCTATTATATATCTTCCTTCAAGTTCATTATTCTCAACATTTTTTCTTTTAAATTTGAATTGGGTTTAGAAACTTGAAGACGCTATTGGATCCTCTTCTTCAACTCATGCCAACGAAAATGGTAAGTGGAATTCTAAAAAGTTGA

mRNA sequence

ATGGCTTTCTCTTCGTTACAAAATTTCATTCGTATCCCTACCTCATTGATTTCAATCCCAAACTCCAAAAATCTCAACGCTGCTGCCTCTTTTCACACCACAATTAATAATAGCTACCTCCCTCCCCAGCTGCTCTCGACCAAGCGTCGTCGTCCAGCGGCCTCTTTGTGCATACAATGCCATGGTGGTGGTTTTTTTTCAATGGACGATGATGACAGCAGTGATAATGAAGGCCCTCTCGAAACAATCAACAAAGTTTACAAAAGTATAAAGAAGAAAGACGTTGCTAAGTTGGCTAATGTAATAGCTGATCAACGTCCAGATATCGTGGATTCCATACCTTTTCTTCGAACCAGGCTGAAAATGAGGAAGCTGGCGTCTCATATCATAAAGGGATTACAAGAGAACCTTGTGTTTTCAATCCAACCAACAACAAAAGATGGATCAATGGTGGGCATTATATGGAAAGTAGGTTGGAACAAACCGCTAATAAAAATTAAAGAAGGAATCACTATCCATTTTCACCATAGCTATGTTGGAATGTTATTGATTGGTTGA

Coding sequence (CDS)

ATGGCTTTCTCTTCGTTACAAAATTTCATTCGTATCCCTACCTCATTGATTTCAATCCCAAACTCCAAAAATCTCAACGCTGCTGCCTCTTTTCACACCACAATTAATAATAGCTACCTCCCTCCCCAGCTGCTCTCGACCAAGCGTCGTCGTCCAGCGGCCTCTTTGTGCATACAATGCCATGGTGGTGGTTTTTTTtCAATGGACGATGATGACAGCAGTGATAATGAAGGCCCTCTCGAAACAATCAACAAAGTTTACAAAAGTATAAAGAAGAAAGACGTTGCTAAGTTGGCTAATGTAATAGCTGATCAACGTCCAGATATCGTGGATTCCATACCTTTTCTTCGAACCAGGCTGAAAATGAGGAAGCTGGCGTCTCATATCATAAAGGGATTACAAGAGAACCTTGTGTTTTCAATCCAACCAACAACAAAAGATGGATCAATGGTGGGCATTATATGGAAAGTAGGTTGGAACAAACCGCTAATAAAAATTAAAGAAGGAATCACTATCCATTTTCACCATAGCTATGTTGGAATGTTATTGATTGGTTGA

Protein sequence

MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQCHGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRLKMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVGMLLIG*
Homology
[Close]
BLAST of Cucsa.044770 vs. TrEMBL
Match: A0A0A0KL37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511720 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-100
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC 60
           MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC
Sbjct: 1   MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC 60

Query: 61  HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL 120
           HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL
Sbjct: 61  HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL 120

Query: 121 KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVG 180
           KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVG
Sbjct: 121 KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVG 180

Query: 181 MLLIG 186
           MLLIG
Sbjct: 181 MLLIG 185

[Close]
BLAST of Cucsa.044770 vs. TrEMBL
Match: V4UFX3_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018278mg PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.5e-09
Identity = 37/132 (28.03%), Postives = 69/132 (52.27%), Query Frame = 1 

Query: 62  GGGFFSMDDDDSS------DNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPF 121
           G  F   D  +SS      D+   LET+ K+Y +IK + + +L+++I D+   + +   F
Sbjct: 9   GSSFVPFDAKNSSSESGEDDHRAALETVLKLYSAIKSQSLRELSDIIGDECRCVCNFFSF 68

Query: 122 ---LRTRLKMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITI 181
              L  + ++    +++I+ L  N+ F ++PT  DG  VG+ W++ WNK  + + +G + 
Sbjct: 69  FQPLEGKKQVLDFFTYLIRSLGNNIEFVVKPTLHDGMNVGVSWRLEWNKKHVPLGKGFSF 128

Query: 182 HFHHSYVGMLLI 185
           H    Y G + I
Sbjct: 129 HICQVYHGKVFI 140

[Close]
BLAST of Cucsa.044770 vs. TrEMBL
Match: A0A067GSZ6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g044071mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.2e-09
Identity = 33/121 (27.27%), Postives = 65/121 (53.72%), Query Frame = 1 

Query: 67  SMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRT---RLKMR 126
           S       D+   LET+ K+Y +IK + + +L+++I D+   + +   FL+    + ++ 
Sbjct: 14  SSSGSGEDDHRAALETVLKLYSAIKSQSLRELSDIIGDECRCVCNFFSFLQPLQGKKQVL 73

Query: 127 KLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVGMLL 185
              +++I+ L  N+ F ++PT  DG  VG+ W++ WNK  + + +G + H    Y G + 
Sbjct: 74  DFFTYLIRSLGNNIEFVVKPTLHDGMNVGVSWRLEWNKKHVPLGKGFSFHICQVYQGKVF 133

[Close]
BLAST of Cucsa.044770 vs. TrEMBL
Match: A0A0K9PEV5_ZOSMR (Uncharacterized protein OS=Zostera marina GN=ZOSMA_266G00040 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 37/138 (26.81%), Postives = 74/138 (53.62%), Query Frame = 1 

Query: 59  QCHGGGFFSMDDDDSSDNEG---------PLETINKVYKSIKKKDVAKLANVIADQRPDI 118
           +  GGG    DDD+   N+G         PL T+ K+Y SIK +D+  L+ +I ++  + 
Sbjct: 78  EVEGGGDEEEDDDNDDKNDGTDDDDDDKQPLGTVRKLYNSIKDRDIQGLSELIGEECREF 137

Query: 119 VDSIPF----LRTRLKMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIK 178
            + +P     L  + ++ +L S +++ + +N+VF ++P+ ++G  V + W++ W K    
Sbjct: 138 CNFVPAVNGPLEGKTQVLELLSMLMRSMGDNVVFVVKPSFQNGLDVTVEWQLEWEKTGRS 197

Query: 179 IKEGITIHFHHSYVGMLL 184
           I +G + +  H Y G ++
Sbjct: 198 IGKGYSFYTVHVYKGKVI 215

[Close]
BLAST of Cucsa.044770 vs. TrEMBL
Match: A0A068VQX5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007476001 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 39/139 (28.06%), Postives = 73/139 (52.52%), Query Frame = 1 

Query: 49  RRRPAASLCIQCHGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQ--- 108
           R +   S+  +C   G  S DDD  +     LET+ K+YK+IK K+  +L+++I ++   
Sbjct: 46  RDQATLSVACKCSAQGLGSEDDDRRA-----LETVLKLYKAIKNKNFNELSDIIGEECLC 105

Query: 109 RPDIVDSIPFLRTRLKMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIK 168
             + V +      + ++    S ++K L  N+   ++PT  DG  VG+ WK+ W K  + 
Sbjct: 106 NCNFVSTFHPFHGKEQVLGFFSSLMKNLGNNIEIVVKPTFHDGMNVGVSWKLEWGKNRVP 165

Query: 169 IKEGITIHFHHSYVGMLLI 185
           + +G++ +  H Y G ++I
Sbjct: 166 LGKGLSFYTCHIYQGKVVI 179

[Close]
BLAST of Cucsa.044770 vs. NCBI nr
Match: gi|778720180|ref|XP_011658120.1| (PREDICTED: uncharacterized protein LOC105435947 isoform X1 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 4.4e-100
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1 

Query: 1   MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC 60
           MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC
Sbjct: 1   MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC 60

Query: 61  HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL 120
           HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL
Sbjct: 61  HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL 120

Query: 121 KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVG 180
           KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVG
Sbjct: 121 KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVG 180

Query: 181 MLLIG 186
           MLLIG
Sbjct: 181 MLLIG 185

[Close]
BLAST of Cucsa.044770 vs. NCBI nr
Match: gi|778720183|ref|XP_011658121.1| (PREDICTED: uncharacterized protein LOC105435947 isoform X2 [Cucumis sativus])

HSP 1 Score: 311.2 bits (796), Expect = 1.2e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 

Query: 1   MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC 60
           MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC
Sbjct: 1   MAFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINNSYLPPQLLSTKRRRPAASLCIQC 60

Query: 61  HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL 120
           HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL
Sbjct: 61  HGGGFFSMDDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRTRL 120

Query: 121 KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWK 157
           KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWK
Sbjct: 121 KMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWK 156

[Close]
BLAST of Cucsa.044770 vs. NCBI nr
Match: gi|659079093|ref|XP_008440070.1| (PREDICTED: uncharacterized protein LOC103484658 [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 143/187 (76.47%), Postives = 156/187 (83.42%), Query Frame = 1 

Query: 2   AFSSLQNFIRIPTSLISIPNSKNLNAAASFHTTINN-SYLPPQLLSTKRRRPAASLCIQC 61
           A SSLQNFI  PTS     NS+NLNAAASFHTTINN SYLPPQ LSTKRRR   SLC+QC
Sbjct: 4   ALSSLQNFIHFPTSFSISSNSRNLNAAASFHTTINNNSYLPPQPLSTKRRR-RPSLCVQC 63

Query: 62  HGGGFFSM-DDDDSSDN-EGPLETINKVYKSIKKKDVAKLANVIADQRPDIVDSIPFLRT 121
           HGGG FSM + DD+ DN E PLETINKVYKSIKKKDV +LANVIADQRPDI+DSIPFL T
Sbjct: 64  HGGGSFSMKNQDDNDDNDEDPLETINKVYKSIKKKDVIELANVIADQRPDIMDSIPFLGT 123

Query: 122 RLKMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSY 181
            LKMRKL S+++KGLQE+LVF + PT KDGSMVGI WKVGW KPL+K K+GITIH HHSY
Sbjct: 124 SLKMRKLVSNMVKGLQESLVFYVLPTKKDGSMVGIKWKVGWEKPLVKSKKGITIHSHHSY 183

Query: 182 VGMLLIG 186
           VG LLIG
Sbjct: 184 VGKLLIG 189

[Close]
BLAST of Cucsa.044770 vs. NCBI nr
Match: gi|568827695|ref|XP_006468185.1| (PREDICTED: uncharacterized protein LOC102612221 [Citrus sinensis])

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 45/162 (27.78%), Postives = 84/162 (51.85%), Query Frame = 1 

Query: 33  TTINNSYLPPQLLSTKRRRPAASLCIQCHGG-GFFSMDDDDSS------DNEGPLETINK 92
           T++ N+   P LL+   + P +S     H G  F   D  +SS      D+   LET+ K
Sbjct: 37  TSVLNNSSAPYLLNPLIQFPTSSPSPSRHRGLSFVPFDAKNSSSGSGEDDHRAALETVLK 96

Query: 93  VYKSIKKKDVAKLANVIADQRPDIVDSIPF---LRTRLKMRKLASHIIKGLQENLVFSIQ 152
           +Y +IK + + +L+++I D+   + +   F   L+ + ++    +++I+ L  N+ F ++
Sbjct: 97  LYSAIKSQSLRELSDIIGDECRCVCNFFSFFQPLQGKKQVLDFFTYLIRSLGNNIEFVVK 156

Query: 153 PTTKDGSMVGIIWKVGWNKPLIKIKEGITIHFHHSYVGMLLI 185
           PT  DG  VG+ W++ WNK  + + +G + H    Y G + I
Sbjct: 157 PTVHDGMNVGVSWRLEWNKKHVPLGKGFSFHICQVYQGKVFI 198

[Close]
BLAST of Cucsa.044770 vs. NCBI nr
Match: gi|747096455|ref|XP_011096150.1| (PREDICTED: uncharacterized protein LOC105175412 [Sesamum indicum])

HSP 1 Score: 73.2 bits (178), Expect = 5.5e-10
Identity = 37/144 (25.69%), Postives = 82/144 (56.94%), Query Frame = 1 

Query: 51  RPAASLCIQCHGG---GFFSM----DDDDSSDNEGPLETINKVYKSIKKKDVAKLANVIA 110
           R + ++C++ +G    GF S+     D    +   PL+T+ K+Y+++K K++++++++IA
Sbjct: 45  RHSRNVCLRGNGSMRTGFASVACAAKDSGPPEQHRPLDTVLKLYEALKNKNISEISDIIA 104

Query: 111 DQR---PDIVDSIPFLRTRLKMRKLASHIIKGLQENLVFSIQPTTKDGSMVGIIWKVGWN 170
           ++     + V +      + ++    S ++K L  N+ F +Q T+ DG +V + WK+ WN
Sbjct: 105 EECLCVSNFVSAFQPFHGKKQVLAFFSSLMKNLGNNIEFVVQQTSDDGMVVAVSWKLEWN 164

Query: 171 KPLIKIKEGITIHFHHSYVGMLLI 185
           K  + + +G + + +H Y G ++I
Sbjct: 165 KAPLPLGKGFSFYMYHVYQGKVMI 188

The following BLAST results are available for this feature:
BLAST of Cucsa.044770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL37_CUCSA3.1e-100100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511720 PE=4 SV=1[more]
V4UFX3_9ROSI5.5e-0928.03Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10018278mg PE=... [more]
A0A067GSZ6_CITSI7.2e-0927.27Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g044071mg PE=4 S... [more]
A0A0K9PEV5_ZOSMR1.2e-0826.81Uncharacterized protein OS=Zostera marina GN=ZOSMA_266G00040 PE=4 SV=1[more]
A0A068VQX5_COFCA1.2e-0828.06Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00007476001 PE=4 SV=1[more]
BLAST of Cucsa.044770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778720180|ref|XP_011658120.1|4.4e-100100.00PREDICTED: uncharacterized protein LOC105435947 isoform X1 [Cucumis sativus][more]
gi|778720183|ref|XP_011658121.1|1.2e-81100.00PREDICTED: uncharacterized protein LOC105435947 isoform X2 [Cucumis sativus][more]
gi|659079093|ref|XP_008440070.1|1.1e-6976.47PREDICTED: uncharacterized protein LOC103484658 [Cucumis melo][more]
gi|568827695|ref|XP_006468185.1|1.9e-1027.78PREDICTED: uncharacterized protein LOC102612221 [Citrus sinensis][more]
gi|747096455|ref|XP_011096150.1|5.5e-1025.69PREDICTED: uncharacterized protein LOC105175412 [Sesamum indicum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.044770.1Cucsa.044770.1mRNA