Cucsa.043330 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTAGCTACAATTGGCTGTCGGGGGCGATCTATTTTATGAAATTGATCGACCTAAATTTTGCTCCCAATTACCTTTTTCTGTCATCTTTATCGAATCATAATTCGAATTGTCTTCGCCGATTAAGGCCAGAGTATGTGCGGCCATTTCTTCCCTGGGCTATGAGACGAGTCCCTACCAAAATAATTCCCAATTTCCAATCGTCAAGAATTTACCCTAATTCGATCATGGCTAGCGAGGGAACCAGAGAAATGCAATCATCAGTTGATTCGAAGAAGAAAGGCGTGGAGGAGGAGAAAGCAGAGAAAGAGAAAGAGAAAGAGGAGATGGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGTGGGAGTGGATGTGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCCCCAATTGTTGAGATTTCAATTTCAGGCTTCCTCCAGCCCCAGTTTGTAATTGAAAATTGAATCTGTTTGCTGTTGTAAACTCAACGAGTTCAAATTAAATTGAATCTGTATCTGTTTCTTTAAGAACAATTGTTCAGTGAGATGAAGGCCAATAAACACAATTCATTTGTCATAGCACAGCACG AGTAGCTACAATTGGCTGTCGGGGGCGATCTATTTTATGAAATTGATCGACCTAAATTTTGCTCCCAATTACCTTTTTCTGTCATCTTTATCGAATCATAATTCGAATTGTCTTCGCCGATTAAGGCCAGAGTATGTGCGGCCATTTCTTCCCTGGGCTATGAGACGAGTCCCTACCAAAATAATTCCCAATTTCCAATCGTCAAGAATTTACCCTAATTCGATCATGGCTAGCGAGGGAACCAGAGAAATGCAATCATCAGTTGATTCgaagaagaaaggcgtggaggaggagaaagcagagaaagagaaagagaaagaggagATGGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGTGGGAGTGGATGTGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCCCCAATTGTTGAGATTTCAATTTCAGGCTTCCTCCAGCCCCAGTTTGTAATTGAAAATTGAATCTGTTTGCTGTTGTAAACTCAACGAGTTCAAATTAAATTGAATCTGTATCTGTTTCTTTAAGAACAATTGTTCAGTGAGATGAAGGCCAATAAACACAATTCATTTGTCATAGCACAGCACG ATGAAATTGATCGACCTAAATTTTGCTCCCAATTACCTTTTTCTGTCATCTTTATCGAATCATAATTCGAATTGTCTTCGCCGATTAAGGCCAGAGTATGTGCGGCCATTTCTTCCCTGGGCTATGAGACGAGTCCCTACCAAAATAATTCCCAATTTCCAATCGTCAAGAATTTACCCTAATTCGATCATGGCTAGCGAGGGAACCAGAGAAATGCAATCATCAGTTGATTCGAAGAAGAAAGGCGTGGAGGAGGAGAAAGCAGAGAAAGAGAAAGAGAAAGAGGAGATGGTGAAATTGCCACCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGTGGGAGTGGATGTGTTCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAACAAGCTTTGCGAGAAAGGTTCGGCGCCCCCCAATTGTTGA MKLIDLNFAPNYLFLSSLSNHNSNCLRRLRPEYVRPFLPWAMRRVPTKIIPNFQSSRIYPNSIMASEGTREMQSSVDSKKKGVEEEKAEKEKEKEEMVKLPPPPEKPLPGDCCGSGCVRCVWDVYYEELEDYNKLCEKGSAPPNC*
BLAST of Cucsa.043330 vs. Swiss-Prot
Match: YJH2_SCHPO (UPF0651 protein P31B10.02, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCP31B10.02 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.5e-07 Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 1
BLAST of Cucsa.043330 vs. Swiss-Prot
Match: NB5R5_MOUSE (NADH-cytochrome b5 reductase-like OS=Mus musculus GN=Cyb5rl PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06 Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 1
BLAST of Cucsa.043330 vs. TrEMBL
Match: A0A0A0KKK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504670 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of Cucsa.043330 vs. TrEMBL
Match: M4E4A5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.0e-19 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1
BLAST of Cucsa.043330 vs. TrEMBL
Match: A0A103XKF0_CYNCS (Oxidoreductase-like, N-terminal OS=Cynara cardunculus var. scolymus GN=Ccrd_005642 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.9e-18 Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 1
BLAST of Cucsa.043330 vs. TrEMBL
Match: A0A087GEK2_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499200 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.1e-18 Identity = 53/88 (60.23%), Postives = 59/88 (67.05%), Query Frame = 1
BLAST of Cucsa.043330 vs. TrEMBL
Match: A0A061DLT1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000269 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.1e-18 Identity = 48/78 (61.54%), Postives = 54/78 (69.23%), Query Frame = 1
BLAST of Cucsa.043330 vs. TAIR10
Match: AT5G17280.1 (AT5G17280.1 Oxidoreductase-like, N-terminal (InterPro:IPR019180)) HSP 1 Score: 97.1 bits (240), Expect = 9.8e-21 Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 1
BLAST of Cucsa.043330 vs. NCBI nr
Match: gi|659080428|ref|XP_008440785.1| (PREDICTED: uncharacterized protein LOC103485102 [Cucumis melo]) HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72 Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 1
BLAST of Cucsa.043330 vs. NCBI nr
Match: gi|700193683|gb|KGN48887.1| (hypothetical protein Csa_6G504670 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-38 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1
BLAST of Cucsa.043330 vs. NCBI nr
Match: gi|685270307|ref|XP_009126175.1| (PREDICTED: uncharacterized protein LOC103851097 [Brassica rapa]) HSP 1 Score: 102.1 bits (253), Expect = 8.7e-19 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1
BLAST of Cucsa.043330 vs. NCBI nr
Match: gi|976904659|gb|KVH92323.1| (Oxidoreductase-like, N-terminal [Cynara cardunculus var. scolymus]) HSP 1 Score: 99.4 bits (246), Expect = 5.6e-18 Identity = 47/77 (61.04%), Postives = 55/77 (71.43%), Query Frame = 1
BLAST of Cucsa.043330 vs. NCBI nr
Match: gi|590703092|ref|XP_007046781.1| (Uncharacterized protein TCM_000269 [Theobroma cacao]) HSP 1 Score: 99.0 bits (245), Expect = 7.3e-18 Identity = 48/78 (61.54%), Postives = 54/78 (69.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |