CmoCh07G004460 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATTGATCCACCACAATTTCATTCCGTCTTCCATTTTCTCCTCATCTTTATCGAATCGTAACTCAAATCGTCTGCGCCAATTCGAGGCAGAGAATGTGCGGCGATATGTCCCCTTGGCCATGAGACGAGTCCCTGCGAAAATAATCCCCAATTTCCAGTCGTCAAGCGTTTACCCTAAATCGATCATGGCTAGCGACGGAGCCAGAGAAATCCAATCAGTCGATTTGCAGAGGACAGGCGTGGAGGAGAAAGAAAAGAAAGCGACAGAGAAGAAGGCCGTGAAATTGCCGCCGCCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGTGGTAGTGGATGCGTCCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAATAAGCTTTGCGAGAAAGGTTCGGCGTCCAATTCTTGA ATGAAATTGATCCACCACAATTTCATTCCGTCTTCCATTTTCTCCTCATCTTTATCGAATCGTAACTCAAATCGTCTGCGCCAATTCGAGGCAGAGAATGTGCGGCGATATGTCCCCTTGGCCATGAGACGAGTCCCTGCGAAAATAATCCCCAATTTCCAGTCGTCAAGCGTTTACCCTAAATCGATCATGGCTAGCGACGGAGCCAGAGAAATCCAATCAGTCGATTTGCAGAGGACAGGCGTGGAGGAGAAAGAAAAGAAAGCGACAGAGAAGAAGGCCGTGAAATTGCCGCCGCCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGTGGTAGTGGATGCGTCCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAATAAGCTTTGCGAGAAAGGTTCGGCGTCCAATTCTTGA ATGAAATTGATCCACCACAATTTCATTCCGTCTTCCATTTTCTCCTCATCTTTATCGAATCGTAACTCAAATCGTCTGCGCCAATTCGAGGCAGAGAATGTGCGGCGATATGTCCCCTTGGCCATGAGACGAGTCCCTGCGAAAATAATCCCCAATTTCCAGTCGTCAAGCGTTTACCCTAAATCGATCATGGCTAGCGACGGAGCCAGAGAAATCCAATCAGTCGATTTGCAGAGGACAGGCGTGGAGGAGAAAGAAAAGAAAGCGACAGAGAAGAAGGCCGTGAAATTGCCGCCGCCGCCGCCGGAGAAGCCGTTGCCGGGGGATTGTTGTGGTAGTGGATGCGTCCGATGTGTGTGGGACGTGTATTACGAAGAGCTTGAAGATTACAATAAGCTTTGCGAGAAAGGTTCGGCGTCCAATTCTTGA
BLAST of CmoCh07G004460 vs. Swiss-Prot
Match: YJH2_SCHPO (UPF0651 protein P31B10.02, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCP31B10.02 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 1
BLAST of CmoCh07G004460 vs. TrEMBL
Match: A0A0A0KKK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G504670 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 6.1e-24 Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of CmoCh07G004460 vs. TrEMBL
Match: A0A0D3AJH1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.6e-16 Identity = 60/137 (43.80%), Postives = 78/137 (56.93%), Query Frame = 1
BLAST of CmoCh07G004460 vs. TrEMBL
Match: A9P8F3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.1e-16 Identity = 63/151 (41.72%), Postives = 81/151 (53.64%), Query Frame = 1
BLAST of CmoCh07G004460 vs. TrEMBL
Match: A0A103XKF0_CYNCS (Oxidoreductase-like, N-terminal OS=Cynara cardunculus var. scolymus GN=Ccrd_005642 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.1e-16 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 1
BLAST of CmoCh07G004460 vs. TrEMBL
Match: D7LWZ1_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488592 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.1e-16 Identity = 50/99 (50.51%), Postives = 60/99 (60.61%), Query Frame = 1
BLAST of CmoCh07G004460 vs. TAIR10
Match: AT5G17280.1 (AT5G17280.1 Oxidoreductase-like, N-terminal (InterPro:IPR019180)) HSP 1 Score: 88.6 bits (218), Expect = 3.4e-18 Identity = 51/94 (54.26%), Postives = 60/94 (63.83%), Query Frame = 1
BLAST of CmoCh07G004460 vs. NCBI nr
Match: gi|659080428|ref|XP_008440785.1| (PREDICTED: uncharacterized protein LOC103485102 [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 2.4e-45 Identity = 97/145 (66.90%), Postives = 111/145 (76.55%), Query Frame = 1
BLAST of CmoCh07G004460 vs. NCBI nr
Match: gi|700193683|gb|KGN48887.1| (hypothetical protein Csa_6G504670 [Cucumis sativus]) HSP 1 Score: 118.6 bits (296), Expect = 8.7e-24 Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 1
BLAST of CmoCh07G004460 vs. NCBI nr
Match: gi|1009181324|ref|XP_015872105.1| (PREDICTED: uncharacterized protein LOC107409185 [Ziziphus jujuba]) HSP 1 Score: 96.3 bits (238), Expect = 4.6e-17 Identity = 58/155 (37.42%), Postives = 85/155 (54.84%), Query Frame = 1
BLAST of CmoCh07G004460 vs. NCBI nr
Match: gi|922421010|ref|XP_013616386.1| (PREDICTED: uncharacterized protein LOC106322797 [Brassica oleracea var. oleracea]) HSP 1 Score: 92.8 bits (229), Expect = 5.1e-16 Identity = 60/137 (43.80%), Postives = 78/137 (56.93%), Query Frame = 1
BLAST of CmoCh07G004460 vs. NCBI nr
Match: gi|976904659|gb|KVH92323.1| (Oxidoreductase-like, N-terminal [Cynara cardunculus var. scolymus]) HSP 1 Score: 92.0 bits (227), Expect = 8.7e-16 Identity = 51/78 (65.38%), Postives = 58/78 (74.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |