Cucsa.038060 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.038060
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Sister chromatid cohesion 1 protein 3
Location	scaffold00493 : 111093 .. 114500 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTACTCGCACACGTTGTTGGCCCGTAAAACCCCATTAGGGACCGTGTGGTGTGCAGCTCATTTACAGCACCGTCTGAACAAGAAAGACTATGAGAAGACTAAAATTTCTGTTGTCGTCGGTTAGTATCTTATTTTATTTGTATTGAGCTCTTACATCCCCACTAAGATGGGGTTTCTCTGCCTTTATTGTTAAATTCTTGGCCATTTTCCATTTGTATTTTCTAAGTATGGGTTTTCAAGTGCATGTATGGTTTCTGTGAGTTTGGATGATCTCTGATTCTTGTTTGGGATGGATGTCCTTTTCGTAGATGCAATCATGTTTGGAGAAGTTCCTCTTGCCCTGCGGACGTCAAGCTACCTTCTGTTGGGTGTTGTGCGGATTTATTCAAAGCAAATTGATTATTTAAAACATGATGTCGATGTTTTGGTGATGGAGTTACGAAAAATGCATATGCATGCGTCAGCGATACTCACTTTGCCTGATAGTGTTTATCAAGCACCGTTTTATTCTATCACTTTGCCTGCGACTTTTGATCTTGATGCCTTGGAATTGGATAGTGATATTTACCATGATGGGTAATGTCCCTAGATTCCCAACTATATGATTTATTTGAAATCTCTCTTACACCAATGATTTTGTTCCAACAGAGTTCCAGATACTCATATGAAGAGTCAGGAAGAGATCACTCTTGCAGGTTGAACATTGATTCCCTTTCACATTTATCCCACCCCTGCTCAATAATCTGTAACTCAATATTATACGGACTTATTAACCAACTAAACCATTGCATTGCAGATCAGACTTATATTGGAAGAGATGCTTATTTAGATATATCTTTTGAGGAGGTTCTGTCTTCTTCTTCTTCTTCTTCTCTCCTCTCTCTCACATTTTTTTTAATTCTTTTTTTTCTTTCTAGAATTATTTACACTGGTTTGTTAAGTGTCTTTTATACTTTTATCTATGTTCATTGTCATTATTAAAATTGCTTAATTTTATACACAGGATGTCATGCATGACTCAACACATCCTGGAGGGTCTTCTGATCAGTTCGTTTCAATGGAAGATGAGTAAGACTCCCATACTTTTGAATCCACTCTTTTTCTTGATCAATGGATGGACTACAACCAGGCTGACTGTTCATGTTTTTTGTTTGCAGCATGATCCCGCCACCTCATGTGGATATTACTATGGATGTTGAAGTCCCAAGTGATTTTGAAGATATACTTAACACTGGCCATGATGGGGACAATATGCCACATAGTTTTCCTGAAGTTGAAGTTACGGATGCCATGAATGTTCAAGATTTTGGTCCGAGTAATAAGGGCATTCCTGAAGATGTTTTGTCTCCTCAAAATGTTCCAGAAATGGAAGTTCCACGGGACGTCCCTGTTTTTAGTACAAAAGATGTTCCTATAGTGTCTCCACCTGGTGGTGATGTCATATCTGAACCACCCAGCCCGATAGATGAGAATATAAATCCGGATAAGCTATCAATCATTGAAGACAAGATGACTCCGACGAAGACATCATTACCACATGAGCAAAGTGCCGGACCTCCAACTTCTGCTTCTCCACCAGAGGCATTGAGTAAGTTCAATTCCATTTGCTCTATATTTGGAGTTGTTCTAATTGGTGGCAAATAACTAACGGTGTCTCATTTTTGGATGTTTTCTTCTCCACTGTTTCAGTTCAACCTTCAGTAGAGCATGTTCTTCAACCCACTCCTCCACAACAGCCGAGGCCAAGATCGAGGAAGAGAAAACAGTTCTTTGATAAGTCTACTGTGTTGACTAATAAGTATGTTTGTGATATCTATCATTTGGCTTTTTTGTTTATTTTAATCAATTATTGATATAGAAAGTTGTGTTGCAGGTTTATGAAAAAGGCTCTTGAGGATTCCAGTGATTTATTACGTGAAAGAAGAAACATTCCAAGCTCTTCTTTGGAAGTATGGAAGTTAAACAACAAGCTGAGAGAAAAAAAAGTTTTCCATCATCCTTCCATCACTGGTAAGTGATTTTTTGTTGTAGTTTTGTTTTCTACATCTTTATGAGTTCCTTGAATAGCAGAAAGAAATAAAAAATCTGTGTGCAGGTCTTTGTCATAATCTCTCAGATATTTTTAATGTGGACTATATTGCTACAAAATGTCGTACAATATCCTTGGAGGAGGCTTTGGAGAACTTTGGGGATGCAAGAAATGTTACTTCCACGAGTGAGACTTTATCAGGCCTAATATATGCTCCACCTCTAGCTCCAGAAGTTGCTTCCACTCCATATACCGAAATTCCGAGCTCTGTTGATCCTGCTGGAAACATTCCTTCAGCAGGCGAAACATTTGTGCTCCCTACAGTTGCTCCATCTCCAGAAGTTTCTTCTTCGCCACAATCTAGAATCCCACCCACTGTGAATCCTGCTTCTGTTTCCTATTCTGGTGAGATTGAACATATACGTGACGTTGAAGGAAATCGAGGGGACGAAACCATGGGAGACTTAGATGCTTCTCCAGAAAGGCCCATGCCTTCTCCGAGGCCTTCTGAAGGCTTAGTTACCCCTGTACCAGTATCAACTGAACCTTCAACCTCCATGTTTGAAACTCCGGGGACAATTGATGAGGGATTGGGTGCAGAAGATCTTACACTCTCTGATAAGCAGATTGGTACTGCAGACGAGGTAGGTCTTTCTATTAACATTAGTGCTTCATTTTCTTCTGTAACTTGCGAGTATAATGCAATCTTCCTTCTTCTTATCAGCAGAAAAAGAGGACAGTACCAGCATGGCCACAAAAAAAAGAAAAAAAAAGACTTCACACATTAAATAATTTTTGTCATTCATATTTGGATTAAAGTTGAGAAATAATTTAATGGCTTGTCATCATCTTCATTTTCTGGATTTGAATTAGTTTGATTACTAAAGGTTCAATACATGAACTATTAATTTGAGATGATTTCAAGCAAGACCAAGAATTTTGAATTAGGACTTACCATATTATGTTATATTACCACTTTTGAACTGCTAGAGTTAAAGCCATAGTGTTGATTAAACGATTTGAATCATCACTTGCATTTCTTCATCCTTTTAAGTTCTAACTTGCTGAGATATTATTGTAGGATCTTTATTTCCTGGAAGTAGATAGCTCACCGGCTGGTAAATCAAGTAATGTACTTCCTGTTATTATTTATATGTTTCCTTCAAATATATTTCTTAAGTGTGTTATATAACTTGGGATTTTGATGTGGTGTTGGGACTTAACTTGCTTGTATACAGGATCTCAGGGAACTCGTGGTGTTGACTCGTTGTCAGTGAGAACGAGGTACTTTTCTATCATTCACTCTACAACCCTTTTAATTAAAGTAAACCTATTATCATGGATTGGGCTAGTGGTAAAATGAAGGAAGCATAG

mRNA sequence

ATGTTTTACTCGCACACGTTGTTGGCCCGTAAAACCCCATTAGGGACCGTGTGGTGTGCAGCTCATTTACAGCACCGTCTGAACAAGAAAGACTATGAGAAGACTAAAATTTCTGTTGTCGTCGATGCAATCATGTTTGGAGAAGTTCCTCTTGCCCTGCGGACGTCAAGCTACCTTCTGTTGGGTGTTGTGCGGATTTATTCAAAGCAAATTGATTATTTAAAACATGATGTCGATGTTTTGGTGATGGAGTTACGAAAAATGCATATGCATGCGTCAGCGATACTCACTTTGCCTGATAGTGTTTATCAAGCACCGTTTTATTCTATCACTTTGCCTGCGACTTTTGATCTTGATGCCTTGGAATTGGATAGTGATATTTACCATGATGGCATGATCCCGCCACCTCATGTGGATATTACTATGGATGTTGAAGTCCCAAGTGATTTTGAAGATATACTTAACACTGGCCATGATGGGGACAATATGCCACATAGTTTTCCTGAAGTTGAAGTTACGGATGCCATGAATGTTCAAGATTTTGGTCCGAGTAATAAGGGCATTCCTGAAGATGTTTTGTCTCCTCAAAATGTTCCAGAAATGGAAGTTCCACGGGACGTCCCTGTTTTTAGTACAAAAGATGTTCCTATAGTGTCTCCACCTGGTGGTGATGTCATATCTGAACCACCCAGCCCGATAGATGAGAATATAAATCCGGATAAGCTATCAATCATTGAAGACAAGATGACTCCGACGAAGACATCATTACCACATGAGCAAAGTGCCGGACCTCCAACTTCTGCTTCTCCACCAGAGGCATTGAGTAAGTTCAATTCCATTTGCTCTATATTTGGAGTTGAGGCTTTGGAGAACTTTGGGGATGCAAGAAATGTTACTTCCACGAGTGAGACTTTATCAGGCCTAATATATGCTCCACCTCTAGCTCCAGAAGTTGCTTCCACTCCATATACCGAAATTCCGAGCTCTGTTGATCCTGCTGGAAACATTCCTTCAGCAGGCGAAACATTTGTGCTCCCTACAGTTGCTCCATCTCCAGAAGTTTCTTCTTCGCCACAATCTAGAATCCCACCCACTGTGAATCCTGCTTCTGTTTCCTATTCTGGTGAGATTGAACATATACGTGACGTTGAAGGAAATCGAGGGGACGAAACCATGGGAGACTTAGATGCTTCTCCAGAAAGGCCCATGCCTTCTCCGAGGCCTTCTGAAGGCTTAGTTACCCCTGTACCAGTATCAACTGAACCTTCAACCTCCATGTTTGAAACTCCGGGGACAATTGATGAGGGATTGGGTGCAGAAGATCTTACACTCTCTGATAAGCAGATTGGTACTGCAGACGAGGATCTTTATTTCCTGGAAGTAGATAGCTCACCGGCTGGTAAATCAAGATCTCAGGGAACTCGTGGTGTTGACTCGTTGTCAGTGAGAACGAGTAAACCTATTATCATGGAttgggctagtggtaaaatgaaggaagcatag

Coding sequence (CDS)

ATGTTTTACTCGCACACGTTGTTGGCCCGTAAAACCCCATTAGGGACCGTGTGGTGTGCAGCTCATTTACAGCACCGTCTGAACAAGAAAGACTATGAGAAGACTAAAATTTCTGTTGTCGTCGATGCAATCATGTTTGGAGAAGTTCCTCTTGCCCTGCGGACGTCAAGCTACCTTCTGTTGGGTGTTGTGCGGATTTATTCAAAGCAAATTGATTATTTAAAACATGATGTCGATGTTTTGGTGATGGAGTTACGAAAAATGCATATGCATGCGTCAGCGATACTCACTTTGCCTGATAGTGTTTATCAAGCACCGTTTTATTCTATCACTTTGCCTGCGACTTTTGATCTTGATGCCTTGGAATTGGATAGTGATATTTACCATGATGGCATGATCCCGCCACCTCATGTGGATATTACTATGGATGTTGAAGTCCCAAGTGATTTTGAAGATATACTTAACACTGGCCATGATGGGGACAATATGCCACATAGTTTTCCTGAAGTTGAAGTTACGGATGCCATGAATGTTCAAGATTTTGGTCCGAGTAATAAGGGCATTCCTGAAGATGTTTTGTCTCCTCAAAATGTTCCAGAAATGGAAGTTCCACGGGACGTCCCTGTTTTTAGTACAAAAGATGTTCCTATAGTGTCTCCACCTGGTGGTGATGTCATATCTGAACCACCCAGCCCGATAGATGAGAATATAAATCCGGATAAGCTATCAATCATTGAAGACAAGATGACTCCGACGAAGACATCATTACCACATGAGCAAAGTGCCGGACCTCCAACTTCTGCTTCTCCACCAGAGGCATTGAGTAAGTTCAATTCCATTTGCTCTATATTTGGAGTTGAGGCTTTGGAGAACTTTGGGGATGCAAGAAATGTTACTTCCACGAGTGAGACTTTATCAGGCCTAATATATGCTCCACCTCTAGCTCCAGAAGTTGCTTCCACTCCATATACCGAAATTCCGAGCTCTGTTGATCCTGCTGGAAACATTCCTTCAGCAGGCGAAACATTTGTGCTCCCTACAGTTGCTCCATCTCCAGAAGTTTCTTCTTCGCCACAATCTAGAATCCCACCCACTGTGAATCCTGCTTCTGTTTCCTATTCTGGTGAGATTGAACATATACGTGACGTTGAAGGAAATCGAGGGGACGAAACCATGGGAGACTTAGATGCTTCTCCAGAAAGGCCCATGCCTTCTCCGAGGCCTTCTGAAGGCTTAGTTACCCCTGTACCAGTATCAACTGAACCTTCAACCTCCATGTTTGAAACTCCGGGGACAATTGATGAGGGATTGGGTGCAGAAGATCTTACACTCTCTGATAAGCAGATTGGTACTGCAGACGAGGATCTTTATTTCCTGGAAGTAGATAGCTCACCGGCTGGTAAATCAAGATCTCAGGGAACTCGTGGTGTTGACTCGTTGTCAGTGAGAACGAGTAAACCTATTATCATGGATTGGGCTAGTGGTAAAATGAAGGAAGCATAG

Protein sequence

MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLLLGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDALELDSDIYHDGMIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPSNKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKTSLPHEQSAGPPTSASPPEALSKFNSICSIFGVEALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLPTVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSPRPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPAGKSRSQGTRGVDSLSVRTSKPIIMDWASGKMKEA*

Homology

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BLAST of Cucsa.038060 vs. Swiss-Prot
Match: SCC13_ARATH (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana GN=SYN3 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-31
Identity = 93/224 (41.52%), Postives = 122/224 (54.46%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARK PLGTVWCAAH+  RL K  Y    I   VD IMF EVPLALRTSS+LL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           +GVVRIYSK++DYL +D ++L   + K  +  S  + LP+   QAP  S+TLP   +LD 
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLLNTWVAKAFV--STQVNLPEDARQAPPESVTLPQALNLDE 120

Query: 121 LELDSDIYHDGMIPPPHV----DITMDVEVPSDFEDILNTGHDGDNMPHSFP-EVEVT-- 180
            +L+ D     M    H     DIT+  ++P+  +  +    D D +  S P +V+ +  
Sbjct: 121 FDLEDDTL--DMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTE 180

Query: 181 ---------DAMNVQDFGPSNKGIPED--------VLSPQNVPE 201
                    D     + GP N+  P D          SP+NV E
Sbjct: 181 PVSRHTGEIDVETAHETGPDNE--PRDSNIAFDTGTYSPRNVTE 218

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BLAST of Cucsa.038060 vs. Swiss-Prot
Match: SSC14_ARATH (Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana GN=SYN4 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-27
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYS  +LA+K PLGT+W AAHL+ +L K     T I V VD+I+F E P+ALR SS+LL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYS++++YL  D    ++++++     SA + LP     AP++SITLP TFDLD 
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQ--AFRSAAVDLPPEESTAPYHSITLPETFDLDD 120

Query: 121 LELDSDIYHDGMIPPPHVDITMDVEVPSDFEDIL 155
            EL  +    G     HV     + +    + ++
Sbjct: 121 FELPDNEIFQGNYVDHHVSTKEQITLQDTMDGVV 152

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BLAST of Cucsa.038060 vs. Swiss-Prot
Match: SCC12_ARATH (Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana GN=SYN2 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-19
Identity = 90/288 (31.25%), Postives = 136/288 (47.22%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEV-PLALRTSSYL 60
           MFYSH L++RK PLG +W AA+   +L K   + T I   VD I+  E+  L  R  +YL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGVVRIYSKQIDYLKHDVDVLVMELR----KMHMHASAILTLPDSVYQAPFYSITLPAT 120
           LLGVVRIYSK++D+L  D +  ++ ++    K        ++LP S+     +SI LP  
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPASI---ECFSIALPER 120

Query: 121 FDLDALELD-SDIYHDGMIPPPHVDIT----------MDVEVPSDF---EDILNTGHD-- 180
           F+LDA +L   + +H G +  PH DIT          MD+     F   ED+L T H+  
Sbjct: 121 FELDAFDLGVLEDFHGGNV-KPHEDITLKDGSQETERMDMYSMERFDMEEDLLFTFHETF 180

Query: 181 ----GDNMPHSFPEVEVTDAMNVQDFGPSNKGIPEDVLSPQNVPEMEVPRDVPVFSTKDV 240
                +N   SF      DA NV+D   + +     V+  + +   E  RD    S    
Sbjct: 181 STNHNENKHESFAHDMELDAENVRD---TTEEASVRVVEAEPLDSNEPSRDHQNASRHR- 240

Query: 241 PIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKTSLPHEQSAG 264
               P   D++ EP    D  I  ++ ++ E   T  +  +   +S+G
Sbjct: 241 --EDPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSG 278

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BLAST of Cucsa.038060 vs. Swiss-Prot
Match: RD21L_AILME (Double-strand-break repair protein rad21-like protein 1 OS=Ailuropoda melanoleuca GN=RAD21L1 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.8e-15
Identity = 42/126 (33.33%), Postives = 77/126 (61.11%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFY+H L++++ PL  +W AAH + +L K    +  + + ++ I+  +V +ALRTS +LL
Sbjct: 1   MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSSKVKIALRTSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATF-DLD 120
           LGVVRIY+++  YL  D +  +++++        ++ LP   ++A + +ITLP  F D D
Sbjct: 61  LGVVRIYNRKAKYLLADCNEALLKMKM--TFRPGLVDLPKENFEAAYNAITLPEEFHDFD 120

Query: 121 ALELDS 126
              +++
Sbjct: 121 TQNVNA 124

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BLAST of Cucsa.038060 vs. Swiss-Prot
Match: RD21L_HUMAN (Double-strand-break repair protein rad21-like protein 1 OS=Homo sapiens GN=RAD21L1 PE=2 SV=3)

HSP 1 Score: 84.3 bits (207), Expect = 4.0e-15
Identity = 42/126 (33.33%), Postives = 75/126 (59.52%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFY+H L++++ PL  +W AAH + +L K    +  + + ++ I+  +V +ALRTS +LL
Sbjct: 1   MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIEKILSPKVKIALRTSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATF-DLD 120
           LGVVRIY+++  YL  D     ++++        ++ LP   ++A + +ITLP  F D D
Sbjct: 61  LGVVRIYNRKAKYLLADCSEAFLKMKM--TFCPGLVDLPKENFEASYNAITLPEEFHDFD 120

Query: 121 ALELDS 126
              +++
Sbjct: 121 TQNMNA 124

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BLAST of Cucsa.038060 vs. TrEMBL
Match: A0A0A0L109_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G153290 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 3.4e-106
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 287 EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP 346
           EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP
Sbjct: 436 EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP 495

Query: 347 TVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSP 406
           TVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSP
Sbjct: 496 TVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSP 555

Query: 407 RPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPA 466
           RPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPA
Sbjct: 556 RPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPA 615

Query: 467 GKSRSQGTRGVDSLSVRT 485
           GKSRSQGTRGVDSLSVRT
Sbjct: 616 GKSRSQGTRGVDSLSVRT 633

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BLAST of Cucsa.038060 vs. TrEMBL
Match: A0A0A0L109_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G153290 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 9.7e-93
Identity = 199/330 (60.30%), Postives = 214/330 (64.85%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKD----------------------------- 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKD                             
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  ------------YEKTKISVVVDAI----MFGEVPLALRTSSYL--LLGVVRIYSKQIDY 120
                       Y K  + V+V  +    M     L L  S Y      +    +  +D 
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120

Query: 121 LKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDALELD------SDI 180
           L+ D D+    +   HM +   +TL D  Y        L  +F+ D +         SD 
Sbjct: 121 LELDSDIYHDGVPDTHMKSQEEITLADQTYIGR--DAYLDISFEEDVMHDSTHPGGSSDQ 180

Query: 181 Y---HDGMIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPS 240
           +    D MIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPS
Sbjct: 181 FVSMEDDMIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPS 240

Query: 241 NKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSI 275
           NKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSI
Sbjct: 241 NKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSI 300

HSP 2 Score: 174.5 bits (441), Expect = 3.3e-40
Identity = 122/310 (39.35%), Postives = 174/310 (56.13%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHT L+RK PLGTVW AAHLQHRL K  Y    I   VD IMF EVP+ALR S++LL
Sbjct: 1   MFYSHTFLSRKAPLGTVWTAAHLQHRLKKSHYASIDILSTVDHIMFPEVPIALRMSAHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LG+ RIYSK++DYL HD +++++ L K  + A+  + LP+   QAP  +ITLP T DLDA
Sbjct: 61  LGISRIYSKKVDYLFHDCNIILIGLSK--VFATTQVNLPEDARQAPVQAITLPETLDLDA 120

Query: 121 LELDSDIY----HDGMIPPPHVDITMDVEVPSD--------FEDIL-------------- 180
           ++LD D+Y     D  +  P  DIT+  ++P +        F+D +              
Sbjct: 121 MDLDVDVYTEDASDNHLKSPE-DITLTDQIPVERDAYVAITFDDDIMMDDALPQMDDNLH 180

Query: 181 ---NTGHDG--DNMPHSFPEVEVTDAMNVQDFGPSNK-GIPEDVLS--PQNVPEMEVPRD 240
               +GH+G  D  P +  +V      +VQ  GPSN+  + E V +   Q++PE+E+ RD
Sbjct: 181 EPPESGHEGFEDLGPDNQEQVP-----SVQYAGPSNQTQVLESVSNEGSQDLPEIEMMRD 240

Query: 241 VP-VFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKTSLPHEQSAGPP 274
               FST+ +P + P   +  +   +  ++ I    L +    +   + SLP +Q + PP
Sbjct: 241 ASHDFSTQKLPSMCPDDKNTDALEQALDEKEICSPSLHL----LASGELSLPFQQHSNPP 298

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BLAST of Cucsa.038060 vs. TrEMBL
Match: D7T2W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01440 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.6e-39
Identity = 104/245 (42.45%), Postives = 150/245 (61.22%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHT LARK PLGTVWCAAHLQH+L K  Y  T I   V+ IMF EVP+ALR S +LL
Sbjct: 1   MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYSK++DYL  D +++++ +RK    +S  + LP+    APF+SITLP TF+LDA
Sbjct: 61  LGVVRIYSKKVDYLYQDCNIVLIGIRK--AFSSIEVNLPEDASHAPFHSITLPDTFELDA 120

Query: 121 LELDSDIYHDGMIP---PPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMN 180
           L+LD+D Y +G +        +IT+  ++P   +  +    D  N+   FP +   +A++
Sbjct: 121 LDLDADFYVEGALDMHLRAQEEITLTDQIPIGRDPYIAITFDEVNI--LFPSLLNQNALS 180

Query: 181 V---------QDFGPSNKGIPEDVLSPQNVPEMEVPRD-VPVFSTKDVPIVSPPGGDVIS 233
           +            G SN+ + ED L P ++PE+EV RD +    ++++P+    GG+   
Sbjct: 181 LCCLMDPGLSDIMGQSNERLNEDNL-PHDLPEIEVMRDAIHDLHSENLPV----GGNAGF 236

[Close]

BLAST of Cucsa.038060 vs. TrEMBL
Match: D7T2W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01440 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.9e-01
Identity = 45/151 (29.80%), Postives = 57/151 (37.75%), Query Frame = 1


Query: 312 PPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLPTVAPSPEVSSSPQSRIPPTVNPASV 371
           P +A   A  P    P         P   E F  P VAPSP+         P   +PA +
Sbjct: 450 PLVAQSPAPMPEKAFPEPSVARSPAPMPEEAFPGPEVAPSPDAMPEEAIPEPGVQSPAPM 509

Query: 372 -SYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSPR--PSEGLVTP-VPVSTEPSTSMF 431
                EIE +RD EGN G   + ++  SP R + SP   PS  +     P+ST    S  
Sbjct: 510 PDLDIEIERLRDHEGNAGSNILPEIMPSPTRLIYSPTRFPSSSIRGDFTPISTGDKGS-- 569

Query: 432 ETPGTIDEGLGAEDLTLSD--KQIGTADEDL 457
           E    +    G   L   D     GT   DL
Sbjct: 570 ELDPMVGTDFGTRSLPTPDFSMSAGTFGSDL 598

HSP 2 Score: 171.4 bits (433), Expect = 2.8e-39
Identity = 111/271 (40.96%), Postives = 150/271 (55.35%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYS T LARK PLGTVWCAAHLQHRL K  Y  T IS  VD IMF EVP+ALR S + L
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDISSTVDRIMFPEVPIALRMSGHPL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYSK++DYL HD +V ++ LRK    AS  + LP++   A F S+TLP TFDLDA
Sbjct: 61  LGVVRIYSKKVDYLYHDCNVFLIGLRK--AFASIEVNLPENATTAKFESVTLPQTFDLDA 120

Query: 121 LELDSDIYHDGMIPPPHV----DITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAM 180
           L ++ D Y DG  P  H     +IT+  ++P+D +  +    D D M  + P      + 
Sbjct: 121 LNVEFDTYPDGS-PDDHTKSQEEITLQDQIPTDRDPYVVISFDEDIMMDALP------SK 180

Query: 181 NVQDFGPSNKGIPEDVLSP-QNVPEMEVPRDVPVFSTKDVP--IVSPPGGDVISEPPSPI 240
           +  D     + + ED+L+P + V +M  P   P+ +  +VP  IV  P         +  
Sbjct: 181 HEHDTDAGIRSMEEDILAPLEVVTDMGAPLASPI-NQMEVPTGIVDLPSTQTTVPMDTAE 240

Query: 241 DENINPDKLSIIEDKMTPTKTSLPHEQSAGP 265
            +++ P       +  T  +T  P  +  GP
Sbjct: 241 IQDLGP-------NNQTELQTGSPDFRDPGP 254

[Close]

BLAST of Cucsa.038060 vs. TrEMBL
Match: A0A067L4S9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16714 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.4e-01
Identity = 34/83 (40.96%), Postives = 45/83 (54.22%), Query Frame = 1


Query: 403 MPSPRPSEGLVTPVPVSTEPSTSMFETPGTIDEG-LGAEDLTLSDKQIGTADEDLYFLEV 462
           MP+P  S    +P   +TEP T         D G  G  D+  S  +     EDL+FLE 
Sbjct: 592 MPTPGIS---ASPGTCTTEPETPRTFLEDQFDPGHTGRSDIPESIAET----EDLHFLEA 651

Query: 463 DSSPAGKSRSQGTRGVDSLSVRT 485
           D++PAG   SQGT+ +DSLSVR+
Sbjct: 652 DNTPAG---SQGTQSIDSLSVRS 664

HSP 2 Score: 171.0 bits (432), Expect = 3.6e-39
Identity = 99/209 (47.37%), Postives = 130/209 (62.20%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYS T LARK PLGTVWCAAHLQHRL K  Y  T IS  VD IMF EVP+ALR S +LL
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQHRLKKSHYTSTDISSTVDRIMFPEVPIALRMSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYSK++D+L HD +V+++ LRK     S  + LP++   A F S+TLP TFDLDA
Sbjct: 61  LGVVRIYSKKVDFLYHDCNVVLVGLRK--AFTSIEVNLPENATTAKFESVTLPPTFDLDA 120

Query: 121 LELDSDIYHDGMIPPPHV----DITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDA- 180
           L++D DI   G  P  H+    +IT+  ++P+D +  +    D D M  + P  E  +A 
Sbjct: 121 LDVDFDIDAYGS-PDNHMRSQEEITLQDQIPTDRDPYVVISFDEDVMMDTLPPEEELNAG 180

Query: 181 -MNVQDFGPSNKGIPEDVLSPQNVPEMEV 204
               +D  P + G+  D+ SP  +P   +
Sbjct: 181 IRPTEDIVPPS-GVDTDMASPHTIPSSRI 205

[Close]

BLAST of Cucsa.038060 vs. TAIR10
Match: AT3G59550.1 (AT3G59550.1 Rad21/Rec8-like family protein)

HSP 1 Score: 139.4 bits (350), Expect = 5.9e-33
Identity = 93/224 (41.52%), Postives = 122/224 (54.46%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARK PLGTVWCAAH+  RL K  Y    I   VD IMF EVPLALRTSS+LL
Sbjct: 1   MFYSHTLLARKGPLGTVWCAAHVHQRLKKSQYTSINIPDTVDNIMFPEVPLALRTSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           +GVVRIYSK++DYL +D ++L   + K  +  S  + LP+   QAP  S+TLP   +LD 
Sbjct: 61  VGVVRIYSKKVDYLYNDWNLLNTWVAKAFV--STQVNLPEDARQAPPESVTLPQALNLDE 120

Query: 121 LELDSDIYHDGMIPPPHV----DITMDVEVPSDFEDILNTGHDGDNMPHSFP-EVEVT-- 180
            +L+ D     M    H     DIT+  ++P+  +  +    D D +  S P +V+ +  
Sbjct: 121 FDLEDDTL--DMEFDNHTRSEEDITLTDQIPTGIDPYVAVTFDEDIISESIPMDVDQSTE 180

Query: 181 ---------DAMNVQDFGPSNKGIPED--------VLSPQNVPE 201
                    D     + GP N+  P D          SP+NV E
Sbjct: 181 PVSRHTGEIDVETAHETGPDNE--PRDSNIAFDTGTYSPRNVTE 218

[Close]

BLAST of Cucsa.038060 vs. TAIR10
Match: AT5G16270.1 (AT5G16270.1 sister chromatid cohesion 1 protein 4)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-28
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYS  +LA+K PLGT+W AAHL+ +L K     T I V VD+I+F E P+ALR SS+LL
Sbjct: 1   MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEAPIALRLSSHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYS++++YL  D    ++++++     SA + LP     AP++SITLP TFDLD 
Sbjct: 61  LGVVRIYSRKVNYLFDDCSEALLKVKQ--AFRSAAVDLPPEESTAPYHSITLPETFDLDD 120

Query: 121 LELDSDIYHDGMIPPPHVDITMDVEVPSDFEDIL 155
            EL  +    G     HV     + +    + ++
Sbjct: 121 FELPDNEIFQGNYVDHHVSTKEQITLQDTMDGVV 152

[Close]

BLAST of Cucsa.038060 vs. TAIR10
Match: AT5G40840.2 (AT5G40840.2 Rad21/Rec8-like family protein)

HSP 1 Score: 99.4 bits (246), Expect = 6.8e-21
Identity = 90/288 (31.25%), Postives = 136/288 (47.22%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEV-PLALRTSSYL 60
           MFYSH L++RK PLG +W AA+   +L K   + T I   VD I+  E+  L  R  +YL
Sbjct: 1   MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60

Query: 61  LLGVVRIYSKQIDYLKHDVDVLVMELR----KMHMHASAILTLPDSVYQAPFYSITLPAT 120
           LLGVVRIYSK++D+L  D +  ++ ++    K        ++LP S+     +SI LP  
Sbjct: 61  LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPASI---ECFSIALPER 120

Query: 121 FDLDALELD-SDIYHDGMIPPPHVDIT----------MDVEVPSDF---EDILNTGHD-- 180
           F+LDA +L   + +H G +  PH DIT          MD+     F   ED+L T H+  
Sbjct: 121 FELDAFDLGVLEDFHGGNV-KPHEDITLKDGSQETERMDMYSMERFDMEEDLLFTFHETF 180

Query: 181 ----GDNMPHSFPEVEVTDAMNVQDFGPSNKGIPEDVLSPQNVPEMEVPRDVPVFSTKDV 240
                +N   SF      DA NV+D   + +     V+  + +   E  RD    S    
Sbjct: 181 STNHNENKHESFAHDMELDAENVRD---TTEEASVRVVEAEPLDSNEPSRDHQNASRHR- 240

Query: 241 PIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKTSLPHEQSAG 264
               P   D++ EP    D  I  ++ ++ E   T  +  +   +S+G
Sbjct: 241 --EDPESDDILLEPQMSEDIRIAQEEDTVRETICTIVQRLVDSHESSG 278

[Close]

BLAST of Cucsa.038060 vs. TAIR10
Match: AT5G05490.1 (AT5G05490.1 Rad21/Rec8-like family protein)

HSP 1 Score: 67.4 bits (163), Expect = 2.9e-11
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 1


Query: 6   TLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLLLGVVR 65
           TLLARK PLG +W AA L  ++N+K  +K  I  + + I+   VP+ALR S  L+ GVV 
Sbjct: 16  TLLARKAPLGQIWMAATLHAKINRKKLDKLDIIQICEEILNPSVPMALRLSGILMGGVVI 75

Query: 66  IYSKQIDYLKHDVDVLVMELRKMHMHASA--ILTLPDSVYQAPFYSITLPATFDLD 120
           +Y +++  L  DV+  ++E+       S      LP     A   ++TLP   + D
Sbjct: 76  VYERKVKLLFDDVNRFLVEINGAWRTKSVPDPTLLPKGKTHARKEAVTLPENEEAD 131

[Close]

BLAST of Cucsa.038060 vs. NCBI nr
Match: gi|778692207|ref|XP_011653424.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis sativus])

HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 287 EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP 346
           EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP
Sbjct: 436 EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP 495

Query: 347 TVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSP 406
           TVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSP
Sbjct: 496 TVAPSPEVSSSPQSRIPPTVNPASVSYSGEIEHIRDVEGNRGDETMGDLDASPERPMPSP 555

Query: 407 RPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPA 466
           RPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPA
Sbjct: 556 RPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSPA 615

Query: 467 GKSRSQGTRGVDSLSVRT 485
           GKSRSQGTRGVDSLSVRT
Sbjct: 616 GKSRSQGTRGVDSLSVRT 633

[Close]

BLAST of Cucsa.038060 vs. NCBI nr
Match: gi|778692207|ref|XP_011653424.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis sativus])

HSP 1 Score: 349.0 bits (894), Expect = 1.4e-92
Identity = 199/330 (60.30%), Postives = 214/330 (64.85%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKD----------------------------- 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKD                             
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  ------------YEKTKISVVVDAI----MFGEVPLALRTSSYL--LLGVVRIYSKQIDY 120
                       Y K  + V+V  +    M     L L  S Y      +    +  +D 
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120

Query: 121 LKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDALELD------SDI 180
           L+ D D+    +   HM +   +TL D  Y        L  +F+ D +         SD 
Sbjct: 121 LELDSDIYHDGVPDTHMKSQEEITLADQTYIGR--DAYLDISFEEDVMHDSTHPGGSSDQ 180

Query: 181 Y---HDGMIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPS 240
           +    D MIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPS
Sbjct: 181 FVSMEDDMIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQDFGPS 240

Query: 241 NKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSI 275
           NKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSI
Sbjct: 241 NKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSI 300

HSP 2 Score: 336.3 bits (861), Expect = 9.4e-89
Identity = 173/199 (86.93%), Postives = 182/199 (91.46%), Query Frame = 1


Query: 287 EALENFGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLP 346
           EALENFGDARNV S SETLSGL+  PPLAPEVASTPYTEIP++VD AGNIPSAG+TF+ P
Sbjct: 433 EALENFGDARNVASMSETLSGLVDTPPLAPEVASTPYTEIPTTVDSAGNIPSAGKTFLPP 492

Query: 347 TVAPSPEVSSSPQSRIPPTVNPASVSYSG-EIEHIRDVEGNRGDETMGDLDASPERPMPS 406
            VAPSPEV+SSPQS IPPTVNPASVSYSG EIEH+ D EGNRGD T+GDLDASPERPMPS
Sbjct: 493 IVAPSPEVASSPQSGIPPTVNPASVSYSGMEIEHMCDAEGNRGDVTLGDLDASPERPMPS 552

Query: 407 PRPSEGLVTPVPVSTEPSTSMFETPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSP 466
           PRPSEGLV+PVP  TEPSTSMF TPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSP
Sbjct: 553 PRPSEGLVSPVP--TEPSTSMFATPGTIDEGLGAEDLTLSDKQIGTADEDLYFLEVDSSP 612

Query: 467 AGKSRSQGTRGVDSLSVRT 485
           A KSRSQGT GVDSLSVRT
Sbjct: 613 ASKSRSQGTHGVDSLSVRT 629

[Close]

BLAST of Cucsa.038060 vs. NCBI nr
Match: gi|659121743|ref|XP_008460792.1| (PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 1.3e-74
Identity = 178/338 (52.66%), Postives = 197/338 (58.28%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKD----------------------------- 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKD                             
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  ------------YEKTKISVVVDAI----MFGEVPLALRTSSYL--LLGVVRIYSKQIDY 120
                       Y K  + V+V  +    M     L L  S+Y      +    +  +D 
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSAYQAPFYSITFPATFDLDA 120

Query: 121 LKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDALELDSDIYHDG-- 180
           L+ D D+        HM +   +TL D  Y      I   A  D+     + D+ HD   
Sbjct: 121 LELDSDINHDGGPDTHMKSQEEITLADQTY------IGRDAYLDIS---FEEDVMHDSTH 180

Query: 181 --------------MIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMN 240
                         MIPPPHVD    VE+PS FED+LN GH+ DNMPHSF EVEV DAMN
Sbjct: 181 PGGSSDRFISMEADMIPPPHVD----VEIPSVFEDVLNPGHERDNMPHSFLEVEVPDAMN 240

Query: 241 VQDFGPSNKGIPEDVLSPQNVPEMEVPRDV-PVFSTKDVPIVSPPGGDVISEPPSPIDEN 275
           VQDFGPSNK I E   SPQNVPEME+PR+V P FSTKDVPIVSPPGGDVISEPPSPIDEN
Sbjct: 241 VQDFGPSNKSISEGDGSPQNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPIDEN 300

HSP 2 Score: 260.0 bits (663), Expect = 8.5e-66
Identity = 171/365 (46.85%), Postives = 212/365 (58.08%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKI VVVDAIMFGEVPLALRTSSYLL
Sbjct: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKIPVVVDAIMFGEVPLALRTSSYLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDS YQAPFYSIT PATFDLDA
Sbjct: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSAYQAPFYSITFPATFDLDA 120

Query: 121 LELDSDIYHDGMIPPPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMNVQD 180
           LELDSDI HDG  P  H+    ++ +     D    G D   +  SF E  + D+ +   
Sbjct: 121 LELDSDINHDGG-PDTHMKSQEEITL----ADQTYIGRDA-YLDISFEEDVMHDSTHPGG 180

Query: 181 FGPSNKGIPEDVLSPQNVPEMEVPRDVPVFSTKDVPIVSPPGGDVISEPPSPIDENINPD 240
                  +  D++ P +V ++E+P    VF       V  PG +  + P S ++  + PD
Sbjct: 181 SSDRFISMEADMIPPPHV-DVEIP---SVFED-----VLNPGHERDNMPHSFLEVEV-PD 240

Query: 241 KLSIIEDKMTPTKTSLPHEQSAGPPTSASPPEALSKFNS----ICSIFGVEALENFGDAR 300
            +++ +   +    S         P    P E +  F++    I S  G + +       
Sbjct: 241 AMNVQDFGPSNKSISEGDGSPQNVPEMEIPREVVPGFSTKDVPIVSPPGGDVISEPPSPI 300

Query: 301 NVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLPTVAPSPEVSS 360
           +     + LS  I    + P   S P+ +       A  + +  +  V   + P+P    
Sbjct: 301 DENINPDKLS--IIEDKMTPTKTSLPHEQSAGPPTSASPLEALIQPSVEHVLQPTPPQQP 347

Query: 361 SPQSR 362
            P+SR
Sbjct: 361 RPRSR 347

HSP 3 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 122/310 (39.35%), Postives = 174/310 (56.13%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHT L+RK PLGTVW AAHLQHRL K  Y    I   VD IMF EVP+ALR S++LL
Sbjct: 1   MFYSHTFLSRKAPLGTVWTAAHLQHRLKKSHYASIDILSTVDHIMFPEVPIALRMSAHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LG+ RIYSK++DYL HD +++++ L K  + A+  + LP+   QAP  +ITLP T DLDA
Sbjct: 61  LGISRIYSKKVDYLFHDCNIILIGLSK--VFATTQVNLPEDARQAPVQAITLPETLDLDA 120

Query: 121 LELDSDIY----HDGMIPPPHVDITMDVEVPSD--------FEDIL-------------- 180
           ++LD D+Y     D  +  P  DIT+  ++P +        F+D +              
Sbjct: 121 MDLDVDVYTEDASDNHLKSPE-DITLTDQIPVERDAYVAITFDDDIMMDDALPQMDDNLH 180

Query: 181 ---NTGHDG--DNMPHSFPEVEVTDAMNVQDFGPSNK-GIPEDVLS--PQNVPEMEVPRD 240
               +GH+G  D  P +  +V      +VQ  GPSN+  + E V +   Q++PE+E+ RD
Sbjct: 181 EPPESGHEGFEDLGPDNQEQVP-----SVQYAGPSNQTQVLESVSNEGSQDLPEIEMMRD 240

Query: 241 VP-VFSTKDVPIVSPPGGDVISEPPSPIDENINPDKLSIIEDKMTPTKTSLPHEQSAGPP 274
               FST+ +P + P   +  +   +  ++ I    L +    +   + SLP +Q + PP
Sbjct: 241 ASHDFSTQKLPSMCPDDKNTDALEQALDEKEICSPSLHL----LASGELSLPFQQHSNPP 298

[Close]

BLAST of Cucsa.038060 vs. NCBI nr
Match: gi|657966875|ref|XP_008375140.1| (PREDICTED: sister chromatid cohesion 1 protein 3-like [Malus domestica])

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 141/384 (36.72%), Postives = 189/384 (49.22%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYS T LARK PLGTVWCAAHLQ RL K  Y  T I   VD IMF +VP+ALR S +LL
Sbjct: 1   MFYSQTFLARKGPLGTVWCAAHLQSRLKKSHYTSTDIPSTVDRIMFPDVPIALRMSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
            GVVRIYSKQ+DYL  D +V++  LRK    AS  L LP++  QAP  SITLP TFDLDA
Sbjct: 61  FGVVRIYSKQVDYLYQDCNVVLTTLRK--TFASIDLDLPENARQAPVQSITLPETFDLDA 120

Query: 121 LELDSDIYHDGMIPPPHV---DITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMN 180
           L+LD  ++ +G     H    DIT+  ++P   +  +    D D     F         +
Sbjct: 121 LDLDGGVFGEGAYDNHHASQEDITLPDQIPIATDRYVIITFDEDIQNEVFGSDVAPMDED 180

Query: 181 VQDFGPSNKGIPEDVLSPQN--VPEMEVPRDVPVFSTKDVPIVSPPGG---DVISEPPSP 240
           +    P + G+P D  +P N   PE++VP D  VF    VP      G   DV+ +  SP
Sbjct: 181 IHSTTPGD-GVPSDHFTPPNKEAPEVDVPNDF-VFQ-DSVPSNYRETGVMQDVLPKDSSP 240

Query: 241 IDENINPDKLSIIEDKMTPTKTSLP-HEQSAGPPTSASPPEALSKFNSICSIFGVEALEN 300
             + + P +  +++D       S P H Q       A PPE          I    +L N
Sbjct: 241 --QYVQPTE--VMQDDAPLLDDSSPRHVQPMEVMRDAVPPE----------IVPTVSLNN 300

Query: 301 FGDARNVTSTSETLSGLIYAPPLAPEVASTPYTEIPSSVDPAGNIPSAGETFVLPTVAPS 360
             D   +T   ++++     P +  +   +P TE         N PS G        +PS
Sbjct: 301 GND---ITEQEKSIN-----PEMNEKDILSPITE--------ENTPSGGP-------SPS 342

Query: 361 PEVSSSPQSRIP--PTVNPASVSY 374
           P  SS P++ +   P +N   VS+
Sbjct: 361 PLPSSGPRASVASLPDMNDNDVSF 342

[Close]

BLAST of Cucsa.038060 vs. NCBI nr
Match: gi|297736205|emb|CBI24843.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-39
Identity = 104/245 (42.45%), Postives = 150/245 (61.22%), Query Frame = 1


Query: 1   MFYSHTLLARKTPLGTVWCAAHLQHRLNKKDYEKTKISVVVDAIMFGEVPLALRTSSYLL 60
           MFYSHT LARK PLGTVWCAAHLQH+L K  Y  T I   V+ IMF EVP+ALR S +LL
Sbjct: 1   MFYSHTFLARKGPLGTVWCAAHLQHKLKKSHYTATDIPSTVERIMFPEVPIALRMSGHLL 60

Query: 61  LGVVRIYSKQIDYLKHDVDVLVMELRKMHMHASAILTLPDSVYQAPFYSITLPATFDLDA 120
           LGVVRIYSK++DYL  D +++++ +RK    +S  + LP+    APF+SITLP TF+LDA
Sbjct: 61  LGVVRIYSKKVDYLYQDCNIVLIGIRK--AFSSIEVNLPEDASHAPFHSITLPDTFELDA 120

Query: 121 LELDSDIYHDGMIP---PPHVDITMDVEVPSDFEDILNTGHDGDNMPHSFPEVEVTDAMN 180
           L+LD+D Y +G +        +IT+  ++P   +  +    D  N+   FP +   +A++
Sbjct: 121 LDLDADFYVEGALDMHLRAQEEITLTDQIPIGRDPYIAITFDEVNI--LFPSLLNQNALS 180

Query: 181 V---------QDFGPSNKGIPEDVLSPQNVPEMEVPRD-VPVFSTKDVPIVSPPGGDVIS 233
           +            G SN+ + ED L P ++PE+EV RD +    ++++P+    GG+   
Sbjct: 181 LCCLMDPGLSDIMGQSNERLNEDNL-PHDLPEIEVMRDAIHDLHSENLPV----GGNAGF 236

The following BLAST results are available for this feature:

BLAST of Cucsa.038060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SCC13_ARATH	1.1e-31	41.52	Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana GN=SYN3 PE=2 SV=2	[more]
SSC14_ARATH	2.1e-27	42.86	Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana GN=SYN4 PE=2 SV=1	[more]
SCC12_ARATH	1.2e-19	31.25	Sister chromatid cohesion 1 protein 2 OS=Arabidopsis thaliana GN=SYN2 PE=2 SV=2	[more]
RD21L_AILME	1.8e-15	33.33	Double-strand-break repair protein rad21-like protein 1 OS=Ailuropoda melanoleuc...	[more]
RD21L_HUMAN	4.0e-15	33.33	Double-strand-break repair protein rad21-like protein 1 OS=Homo sapiens GN=RAD21...	[more]

BLAST of Cucsa.038060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L109_CUCSA	3.4e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G153290 PE=4 SV=1	[more]
A0A0A0L109_CUCSA	9.7e-93	60.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G153290 PE=4 SV=1	[more]
D7T2W2_VITVI	1.6e-39	42.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01440 PE=4 SV=...	[more]
D7T2W2_VITVI	3.9e-01	29.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g01440 PE=4 SV=...	[more]
A0A067L4S9_JATCU	1.4e-01	40.96	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16714 PE=4 SV=1	[more]

BLAST of Cucsa.038060 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59550.1	5.9e-33	41.52	Rad21/Rec8-like family protein	[more]
AT5G16270.1	1.2e-28	42.86	sister chromatid cohesion 1 protein 4	[more]
AT5G40840.2	6.8e-21	31.25	Rad21/Rec8-like family protein	[more]
AT5G05490.1	2.9e-11	35.34	Rad21/Rec8-like family protein	[more]

BLAST of Cucsa.038060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778692207\|ref\|XP_011653424.1\|	4.9e-106	100.00	PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis sativus]	[more]
gi\|778692207\|ref\|XP_011653424.1\|	1.4e-92	60.30	PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis sativus]	[more]
gi\|659121743\|ref\|XP_008460792.1\|	1.3e-74	52.66	PREDICTED: sister chromatid cohesion 1 protein 3 [Cucumis melo]	[more]
gi\|657966875\|ref\|XP_008375140.1\|	4.7e-40	36.72	PREDICTED: sister chromatid cohesion 1 protein 3-like [Malus domestica]	[more]
gi\|297736205\|emb\|CBI24843.3\|	2.3e-39	42.45	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006910	Rad21_Rec8_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0044699	single-organism process
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle
cellular_component	GO:0031981	nuclear lumen
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.038060.1	Cucsa.038060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006910	Rad21/Rec8-like protein, N-terminal	PFAM	PF04825	Rad21_Rec8_N	coord: 1..90 score: 4.5
None	No IPR available	PANTHER	PTHR12585	SCC1 / RAD21 FAMILY MEMBER	coord: 2..268 score: 4.6
None	No IPR available	PANTHER	PTHR12585:SF36	SISTER CHROMATID COHESION 1 PROTEIN 3	coord: 2..268 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.038060	Csa4G153290	Cucumber (Chinese Long) v2	cgycuB011
Cucsa.038060	MELO3C023172	Melon (DHL92) v3.5.1	cgymeB011
Cucsa.038060	ClCG04G000290	Watermelon (Charleston Gray)	cgywcgB013
Cucsa.038060	CSPI04G10410	Wild cucumber (PI 183967)	cgycpiB011
Cucsa.038060	Lsi01G018800	Bottle gourd (USVL1VR-Ls)	cgylsiB012
Cucsa.038060	MELO3C023173.2	Melon (DHL92) v3.6.1	cgymedB013
Cucsa.038060	CsaV3_4G010560	Cucumber (Chinese Long) v3	cgycucB014
Cucsa.038060	Cla97C04G068650	Watermelon (97103) v2	cgywmbB013
Cucsa.038060	Bhi03G002132	Wax gourd	cgywgoB013

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None