Cucsa.034460 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.034460
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Lysine-specific demethylase rbr-2
Location	scaffold00444 : 178364 .. 179288 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACCTCTTGGAAGCCATTGTTATACATCAACCAAGCTCCAACCTCTGTTTTCTTTACCAAAACAGAGATTCCAACAAATGGGGGACAAATACGATCGCTTCAACCCACAAAAGGTTACCCACAAACACATCTTCTTGCCGATGCTCTGTTCTAAACCGGCGATTAAAGACGGCCGGCCACCCAGATGCGATCGGGACCGTTTAGACTCCTCTTCTGCTGACCCTTTATCGCCGAGAATCGGATGTATGGGTCAAGTTAAGCGGAATAACAGAGTTGCGGGTCTTCCGATTTCTCACAGGATTTTGATTACGACCAAAAATGCCGTTCTTAATAAAAATGGTAACAACCCCAATGTTGGTTACTTCAAGTTGAAGAAGTTTTTCTCCAGCAAAAACCTCTTGGGTTCCCCCTCCACCAACCGAACCGGCGCCGTTTCCACCAGGTCCACCACCGCCATATCGATATCCACGGCGGGTGTCAACGGTTGTGGGAGTAGAAGAAGATTGGCCCCAAATTCTGGAATTACGGGTAAGAAGAGTGTTTCTGAAAATGGGAACTGTGGTTCATTGAACGTAATGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAAGCCGGAGAAGAAAGAAGGGAAACGGAGAATCTTTGGAAGAGGAGATCAGGTGGGATTGTATTACAGAATTTAGAGATTCAACAAACCCATCTTCCAAAGCATCGACTTCAGATTACGACTGTTCGATGAGAAAATTTGGAACTGGGGGGTGTTCATAGATTTAATGGAGTATCTGTAAATGATCTGTTCTTTTGTTTTTGTTTTTTTTTTTTTTTTTTCTTTTTAGGTTTTGGTTGCATCTCAATCACTGATGCTGAAAACAGTGTGATTGGTACTCATTGTTCATAATATATTTTGTTCCAA

mRNA sequence

CACACCTCTTGGAAGCCATTGTTATACATCAACCAAGCTCCAACCTCTGTTTTCTTTACCAAAACAGAGATTCCAACAAATGGGGGACAAATACGATCGCTTCAACCCACAAAAGGTTACCCACAAACACATCTTCTTGCCGATGCTCTGTTCTAAACCGGCGATTAAAGACGGCCGGCCACCCAGATGCGATCGGGACCGTTTAGACTCCTCTTCTGCTGACCCTTTATCGCCGAGAATCGGATGTATGGGTCAAGTTAAGCGGAATAACAGAGTTGCGGGTCTTCCGATTTCTCACAGGATTTTGATTACGACCAAAAATGCCGTTCTTAATAAAAATGGTAACAACCCCAATGTTGGTTACTTCAAGTTGAAGAAGTTTTTCTCCAGCAAAAACCTCTTGGGTTCCCCCTCCACCAACCGAACCGGCGCCGTTTCCACCAGGTCCACCACCGCCATATCGATATCCACGGCGGGTGTCAACGGTTGTGGGAGTAGAAGAAGATTGGCCCCAAATTCTGGAATTACGGGTAAGAAGAGTGTTTCTGAAAATGGGAACTGTGGTTCATTGAACGTAATGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAAGCCGGAGAAGAAAGAAGGGAAACGGAGAATCTTTGGAAGAGGAGATCAGGTTTTGGTTGCATCTCAATCACTGATGCTGAAAACAGTGTGATTGGTACTCATTGTTCATAATATATTTTGTTCCAA

Coding sequence (CDS)

ATGGGGGACAAATACGATCGCTTCAACCCACAAAAGGTTACCCACAAACACATCTTCTTGCCGATGCTCTGTTCTAAACCGGCGATTAAAGACGGCCGGCCACCCAGATGCGATCGGGACCGTTTAGACTCCTCTTCTGCTGACCCTTTATCGCCGAGAATCGGATGTATGGGTCAAGTTAAGCGGAATAACAGAGTTGCGGGTCTTCCGATTTCTCACAGGATTTTGATTACGACCAAAAATGCCGTTCTTAATAAAAATGGTAACAACCCCAATGTTGGTTACTTCAAGTTGAAGAAGTTTTTCTCCAGCAAAAACCTCTTGGGTTCCCCCTCCACCAACCGAACCGGCGCCGTTTCCACCAGGTCCACCACCGCCATATCGATATCCACGGCGGGTGTCAACGGTTGTGGGAGTAGAAGAAGATTGGCCCCAAATTCTGGAATTACGGGTAAGAAGAGTGTTTCTGAAAATGGGAACTGTGGTTCATTGAACGTAATGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAAGCCGGAGAAGAAAGAAGGGAAACGGAGAATCTTTGGAAGAGGAGATCAGGTTTTGGTTGCATCTCAATCACTGATGCTGAAAACAGTGTGATTGGTACTCATTGTTCATAA

Protein sequence

MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQVKRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVSTRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQKAGEERRETENLWKRRSGFGCISITDAENSVIGTHCS*

Homology

[Close]

BLAST of Cucsa.034460 vs. TrEMBL
Match: A0A0A0KN75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G387980 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 3.8e-110
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60
           MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV
Sbjct: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120
           KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120

Query: 121 TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ 180
           TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ
Sbjct: 121 TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ 180

Query: 181 KAGEERRETENLWKRRSG 199
           KAGEERRETENLWKRRSG
Sbjct: 181 KAGEERRETENLWKRRSG 198

[Close]

BLAST of Cucsa.034460 vs. TrEMBL
Match: W9QZ55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014941 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.9e-34
Identity = 104/212 (49.06%), Postives = 124/212 (58.49%), Query Frame = 1


Query: 1   MGDKYDRFNPQKVTHKH-IFLPMLCSKPAIKDGRP-PRCDRDRLDSSSADPLSPRIGCMG 60
           MG +++RF+  +V  ++ IFLPMLCS+PAIKD    PRC  DR  SSS+DPLSPRI C+G
Sbjct: 1   MGPEFNRFHHHQVHQRNAIFLPMLCSRPAIKDVHGLPRC-VDRSSSSSSDPLSPRISCIG 60

Query: 61  QVKRNNRVAGLPISHRIL-ITTKNAVLNKNGNNPN-----VGYFKLKKFFSSKNLLGSPS 120
           QVKR NRV G P  HR L    KN   N N  N N     V Y KLKKFFSSKNL  +P+
Sbjct: 61  QVKRKNRVVGFPNPHRSLNALIKNTTNNNNAKNDNHNIHIVKYSKLKKFFSSKNL--TPN 120

Query: 121 TNRTGAVSTRSTTAISISTAGVNGCGSRRRLAPNSGITGKK--SVSENGNCGS----LNV 180
           TN                   V G G RR  AP +G  G      S  G C S    ++V
Sbjct: 121 TN-----------------TPVAGNGRRRVTAPANGANGNGCCGCSSRGVCNSEKCVVSV 180

Query: 181 MDLDPPLPVVRRVQKAGEERRETENLWKRRSG 199
           +DLDPPLPVV+R  +A +E  E E+LWKRRSG
Sbjct: 181 VDLDPPLPVVKRPIQA-QEGMEVESLWKRRSG 191

[Close]

BLAST of Cucsa.034460 vs. TrEMBL
Match: A0A061FGZ0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035006 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-32
Identity = 88/200 (44.00%), Postives = 120/200 (60.00%), Query Frame = 1


Query: 1   MGDKYDRF---NPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCM 60
           MG+ Y++    +   + HK  FLPMLCSKP+IKD   P+  +DR  S S DPLSP+I CM
Sbjct: 1   MGNGYNQHLHHHNMHLHHKGAFLPMLCSKPSIKDVALPKW-QDRSASFSDDPLSPKISCM 60

Query: 61  GQVKRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTG 120
           GQVKRNNR+ G P SH++ ITTKN+      +N ++ Y KLKK FS KNL  SP+T    
Sbjct: 61  GQVKRNNRIVGFPASHKLTITTKNS------SNNSIKYLKLKKLFSGKNLTSSPAT---- 120

Query: 121 AVSTRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVR 180
              T +TT  S           RR+    +G +  K+     N  S+N+ ++DPPLPV+R
Sbjct: 121 ---TTNTTTTS----------CRRKEVLVNGTSRPKNDDGKENSASINIENMDPPLPVIR 175

Query: 181 RVQKAGEERRETENLWKRRS 198
           RV K G ++ + + LW+RRS
Sbjct: 181 RVPKQG-DKGDGDTLWQRRS 175

[Close]

BLAST of Cucsa.034460 vs. TrEMBL
Match: F6H0N2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04130 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.5e-32
Identity = 92/196 (46.94%), Postives = 115/196 (58.67%), Query Frame = 1


Query: 6   DRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQVKRNNR 65
           ++FN   + HK  FLP+LCS+P IKD   P        SSS DPLSPR+GCMGQVKRNNR
Sbjct: 3   NQFNHHHLHHKSTFLPILCSRPCIKDVAIPNSA-----SSSNDPLSPRVGCMGQVKRNNR 62

Query: 66  VAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVSTRSTT 125
           V G P SHR   T       KN N  +V Y KLKKFFSSKNL+ +P     G++S     
Sbjct: 63  VMGFPASHRFTATANATAAAKNAN--SVKYSKLKKFFSSKNLVATPG----GSIS----- 122

Query: 126 AISISTAGVNGCGSRRRLAPNSGITGKKSVS--ENGNCGS-LNVMDLDPPLPVVRRVQKA 185
                       GSRR L    G  G   +   E+ N  + +NV+DLDPPLPV++RVQ+ 
Sbjct: 123 ------------GSRRELIV-GGRRGSSKIDCHEDENYATVINVVDLDPPLPVIKRVQQR 168

Query: 186 GEERRETENLWKRRSG 199
           G +  ++E+LWKRRSG
Sbjct: 183 G-DGGDSESLWKRRSG 168

[Close]

BLAST of Cucsa.034460 vs. TrEMBL
Match: B9GUG7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09020g PE=4 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 9.3e-32
Identity = 85/194 (43.81%), Postives = 114/194 (58.76%), Query Frame = 1


Query: 5   YDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQVKRNN 64
           +   +PQ   HK  FLPMLCS+P IKD   P+ +   +  SS+DPLSP+IGCMGQVKRNN
Sbjct: 11  HQNIHPQ---HKSTFLPMLCSRPTIKDVTLPKWEDRSMSISSSDPLSPKIGCMGQVKRNN 70

Query: 65  RVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVSTRST 124
           ++ G P S++  +TTKN       N  NV Y +LK+ FS KN+L            T +T
Sbjct: 71  KIVGFPTSNKFTVTTKNY------NGANVKYSRLKRIFSGKNIL------------TSAT 130

Query: 125 TAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQKAGE 184
            +I+ STA       RRR    +G  G K      N  S+++ ++DPPLPVV+RVQ+  E
Sbjct: 131 VSIATSTA------HRRREVMMNGANGAKIDDTKENSVSVSIENMDPPLPVVKRVQQPTE 176

Query: 185 ERRETENLWKRRSG 199
           +  E  +LWKRRSG
Sbjct: 191 D-GEANSLWKRRSG 176

[Close]

BLAST of Cucsa.034460 vs. TAIR10
Match: AT1G36940.2 (AT1G36940.2 unknown protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-22
Identity = 70/183 (38.25%), Postives = 92/183 (50.27%), Query Frame = 1


Query: 19  FLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQVKRNNRVAGLPISHRILIT 78
           FLPMLCS+P+IK+   P           ADPLSP+I C+GQVKR+N++ G P +     T
Sbjct: 16  FLPMLCSRPSIKNVTLPAKSHQDDSYQQADPLSPKISCIGQVKRSNKITGFPTT-----T 75

Query: 79  TKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVSTRSTTAISISTAGVNGCG 138
           T +  +     +    YFKLK+ FS KNL  S  T  T    TR+               
Sbjct: 76  TTSTSITPVAQH---RYFKLKRLFSGKNLSFSAPTTTT----TRT--------------- 135

Query: 139 SRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQKAGEERRETENLWKRRSG 198
           SR R+        +K    N     ++V +LDPPLPVV++    G   +  ENLWKRRSG
Sbjct: 136 SRGRI--------RKEEFGNKKIDVIDVAELDPPLPVVKKTHDGGAGDKAAENLWKRRSG 162

Query: 199 FGC 202
            GC
Sbjct: 196 -GC 162

[Close]

BLAST of Cucsa.034460 vs. NCBI nr
Match: gi|778702467|ref|XP_011655205.1| (PREDICTED: uncharacterized protein LOC105435499 [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 5.5e-110
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1


Query: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60
           MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV
Sbjct: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120
           KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120

Query: 121 TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ 180
           TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ
Sbjct: 121 TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ 180

Query: 181 KAGEERRETENLWKRRSG 199
           KAGEERRETENLWKRRSG
Sbjct: 181 KAGEERRETENLWKRRSG 198

[Close]

BLAST of Cucsa.034460 vs. NCBI nr
Match: gi|659121048|ref|XP_008460478.1| (PREDICTED: uncharacterized protein LOC103499279 [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 5.9e-104
Identity = 187/198 (94.44%), Postives = 190/198 (95.96%), Query Frame = 1


Query: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60
           MGDKY+RFNPQ VTHKHIFLPMLCSKPAIKDGRPPRCDRDR DSSSADPLSPRIGCMGQV
Sbjct: 1   MGDKYNRFNPQNVTHKHIFLPMLCSKPAIKDGRPPRCDRDRFDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120
           KRNNRVAGLPISHRILITTKNAV +KNGNNPNVGYFKLKKFFSSKNLLGSPST RTG VS
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVFSKNGNNPNVGYFKLKKFFSSKNLLGSPSTTRTGTVS 120

Query: 121 TRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVRRVQ 180
           TRSTTA+SISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCG LNVMDLDPPLPVVRRVQ
Sbjct: 121 TRSTTAVSISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGPLNVMDLDPPLPVVRRVQ 180

Query: 181 KAGEERRETENLWKRRSG 199
           KAGEE  ETENLWKRRSG
Sbjct: 181 KAGEESGETENLWKRRSG 198

[Close]

BLAST of Cucsa.034460 vs. NCBI nr
Match: gi|1009136537|ref|XP_015885579.1| (PREDICTED: uncharacterized protein LOC107420986 [Ziziphus jujuba])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 95/207 (45.89%), Postives = 123/207 (59.42%), Query Frame = 1


Query: 1   MGDKYDRF---NPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCM 60
           MG + +RF   NP  + H++ FLPMLCS+P+IKD + P  + +R  S S +PLSP+IGCM
Sbjct: 1   MGHECNRFHHHNPLYIHHRNTFLPMLCSRPSIKDVKLPNWE-NRSASFSDEPLSPKIGCM 60

Query: 61  GQVKRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTG 120
           GQVKRNN+V G P S   L  T +   N N  N NV Y KLK+ FS KNL  +P+   T 
Sbjct: 61  GQVKRNNKVIGFPASSHRLTLTGSTTTNNNNININVKYSKLKRLFSGKNL--TPAATGTA 120

Query: 121 AVSTRSTTAISISTAGVNGCGSRRRL---APNSGITGKKSVSENG-NC--GSLNVMDLDP 180
           A                 GCGSRRR+     N    G  S + NG NC    ++V+DLDP
Sbjct: 121 A-----------------GCGSRRRVVLSGANGSRNGCNSNNGNGENCIPTIIDVVDLDP 180

Query: 181 PLPVVRRVQKAGEERRETENLWKRRSG 199
           PLPV+++VQK  E+  E ++LWKRRSG
Sbjct: 181 PLPVIKKVQKT-EKEGEVDSLWKRRSG 186

[Close]

BLAST of Cucsa.034460 vs. NCBI nr
Match: gi|703095345|ref|XP_010095512.1| (hypothetical protein L484_014941 [Morus notabilis])

HSP 1 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 104/212 (49.06%), Postives = 124/212 (58.49%), Query Frame = 1


Query: 1   MGDKYDRFNPQKVTHKH-IFLPMLCSKPAIKDGRP-PRCDRDRLDSSSADPLSPRIGCMG 60
           MG +++RF+  +V  ++ IFLPMLCS+PAIKD    PRC  DR  SSS+DPLSPRI C+G
Sbjct: 1   MGPEFNRFHHHQVHQRNAIFLPMLCSRPAIKDVHGLPRC-VDRSSSSSSDPLSPRISCIG 60

Query: 61  QVKRNNRVAGLPISHRIL-ITTKNAVLNKNGNNPN-----VGYFKLKKFFSSKNLLGSPS 120
           QVKR NRV G P  HR L    KN   N N  N N     V Y KLKKFFSSKNL  +P+
Sbjct: 61  QVKRKNRVVGFPNPHRSLNALIKNTTNNNNAKNDNHNIHIVKYSKLKKFFSSKNL--TPN 120

Query: 121 TNRTGAVSTRSTTAISISTAGVNGCGSRRRLAPNSGITGKK--SVSENGNCGS----LNV 180
           TN                   V G G RR  AP +G  G      S  G C S    ++V
Sbjct: 121 TN-----------------TPVAGNGRRRVTAPANGANGNGCCGCSSRGVCNSEKCVVSV 180

Query: 181 MDLDPPLPVVRRVQKAGEERRETENLWKRRSG 199
           +DLDPPLPVV+R  +A +E  E E+LWKRRSG
Sbjct: 181 VDLDPPLPVVKRPIQA-QEGMEVESLWKRRSG 191

[Close]

BLAST of Cucsa.034460 vs. NCBI nr
Match: gi|590598531|ref|XP_007018923.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 146.7 bits (369), Expect = 4.6e-32
Identity = 88/200 (44.00%), Postives = 120/200 (60.00%), Query Frame = 1


Query: 1   MGDKYDRF---NPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCM 60
           MG+ Y++    +   + HK  FLPMLCSKP+IKD   P+  +DR  S S DPLSP+I CM
Sbjct: 1   MGNGYNQHLHHHNMHLHHKGAFLPMLCSKPSIKDVALPKW-QDRSASFSDDPLSPKISCM 60

Query: 61  GQVKRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTG 120
           GQVKRNNR+ G P SH++ ITTKN+      +N ++ Y KLKK FS KNL  SP+T    
Sbjct: 61  GQVKRNNRIVGFPASHKLTITTKNS------SNNSIKYLKLKKLFSGKNLTSSPAT---- 120

Query: 121 AVSTRSTTAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVVR 180
              T +TT  S           RR+    +G +  K+     N  S+N+ ++DPPLPV+R
Sbjct: 121 ---TTNTTTTS----------CRRKEVLVNGTSRPKNDDGKENSASINIENMDPPLPVIR 175

Query: 181 RVQKAGEERRETENLWKRRS 198
           RV K G ++ + + LW+RRS
Sbjct: 181 RVPKQG-DKGDGDTLWQRRS 175

The following BLAST results are available for this feature:

BLAST of Cucsa.034460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN75_CUCSA	3.8e-110	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G387980 PE=4 SV=1	[more]
W9QZ55_9ROSA	9.9e-34	49.06	Uncharacterized protein OS=Morus notabilis GN=L484_014941 PE=4 SV=1	[more]
A0A061FGZ0_THECC	3.2e-32	44.00	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035006 PE=4 SV=1	[more]
F6H0N2_VITVI	5.5e-32	46.94	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04130 PE=4 SV=...	[more]
B9GUG7_POPTR	9.3e-32	43.81	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s09020g PE=4 SV=2	[more]

BLAST of Cucsa.034460 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G36940.2	2.1e-22	38.25	unknown protein	[more]

BLAST of Cucsa.034460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702467\|ref\|XP_011655205.1\|	5.5e-110	100.00	PREDICTED: uncharacterized protein LOC105435499 [Cucumis sativus]	[more]
gi\|659121048\|ref\|XP_008460478.1\|	5.9e-104	94.44	PREDICTED: uncharacterized protein LOC103499279 [Cucumis melo]	[more]
gi\|1009136537\|ref\|XP_015885579.1\|	1.4e-33	45.89	PREDICTED: uncharacterized protein LOC107420986 [Ziziphus jujuba]	[more]
gi\|703095345\|ref\|XP_010095512.1\|	1.4e-33	49.06	hypothetical protein L484_014941 [Morus notabilis]	[more]
gi\|590598531\|ref\|XP_007018923.1\|	4.6e-32	44.00	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.034460.1	Cucsa.034460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36323	FAMILY NOT NAMED	coord: 127..198 score: 1.8E-34coord: 12..111 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.034460	Cla002142	Watermelon (97103) v1	cgywmB009
Cucsa.034460	Csa5G387980	Cucumber (Chinese Long) v2	cgycuB007
Cucsa.034460	MELO3C022789	Melon (DHL92) v3.5.1	cgymeB007
Cucsa.034460	ClCG03G009070	Watermelon (Charleston Gray)	cgywcgB009
Cucsa.034460	CSPI05G14440	Wild cucumber (PI 183967)	cgycpiB007
Cucsa.034460	CmaCh15G007180	Cucurbita maxima (Rimu)	cgycmaB0019
Cucsa.034460	CmaCh04G023200	Cucurbita maxima (Rimu)	cgycmaB0020
Cucsa.034460	CmoCh04G024250	Cucurbita moschata (Rifu)	cgycmoB0019
Cucsa.034460	CmoCh15G007370	Cucurbita moschata (Rifu)	cgycmoB0018
Cucsa.034460	Lsi09G009700	Bottle gourd (USVL1VR-Ls)	cgylsiB008
Cucsa.034460	Cp4.1LG13g05100	Cucurbita pepo (Zucchini)	cgycpeB0017
Cucsa.034460	Cp4.1LG01g20070	Cucurbita pepo (Zucchini)	cgycpeB0018
Cucsa.034460	MELO3C022789.2	Melon (DHL92) v3.6.1	cgymedB009
Cucsa.034460	CsaV3_5G023550	Cucumber (Chinese Long) v3	cgycucB010
Cucsa.034460	Cla97C03G060230	Watermelon (97103) v2	cgywmbB009
Cucsa.034460	Bhi12G001114	Wax gourd	cgywgoB009
Cucsa.034460	Carg18243	Silver-seed gourd	carcgyB0604
Cucsa.034460	Carg01490	Silver-seed gourd	carcgyB0941

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.034460	Watermelon (97103) v1	cgywmB010