CmoCh04G024250 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G024250
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Lysine-specific demethylase rbr-2
Location	Cmo_Chr04 : 18014874 .. 18015527 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGACAGATACAATCGGTTTAATCCATCAAATATTCGTCAGAAAAACATGTTCTTGCCGATGCTCTGTTCTAAGCCGGCGACCAAAGACTGCCGGCCGCCGAGATGCGACCGGGACCGTTCGGAGTCATTTTCCGGCGACCCTTTGTCGCCGAGAATCGGATGTATGGGTCAAGTGAAGCGGAATAACAGAGTTGCAGGTCTTCCAATTTCCCATAGGATTTTGATTACGACCAAAAATGAGAACAGTCCCACCGCTGGTTACTTTAAGCTGAAGAAATTTTTCTCCAGCAAAAATCTCTTGGCTTCCCCATCCCCCTCTGGCACCGGCACCACCAGGTCCACAGCCGTCGCCGCCGCCGCTGCATCGGTATCTACAGCGGGTGTCAACGGTTGTAGGAGCAGAAGAAGACCCACTCCAGCTTTTGGAAATAAGAAGAAGGGTGTTTGTGAAAATGGGAATTGTGAATCATTAAGCGTTGTGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAGGGCGGAGAAGAAAGAGGGGAAATGGAGAATCTTTGGAAGAGGAGGTCAGGTGGAATTGTATTACAGGGCTTGCAGATTCAGCAGACTCATGTTCCGAAGCATCGGCTTCAGATTACGACTGTTTGA

mRNA sequence

ATGGGTGACAGATACAATCGGTTTAATCCATCAAATATTCGTCAGAAAAACATGTTCTTGCCGATGCTCTGTTCTAAGCCGGCGACCAAAGACTGCCGGCCGCCGAGATGCGACCGGGACCGTTCGGAGTCATTTTCCGGCGACCCTTTGTCGCCGAGAATCGGATGTATGGGTCAAGTGAAGCGGAATAACAGAGTTGCAGGTCTTCCAATTTCCCATAGGATTTTGATTACGACCAAAAATGAGAACAGTCCCACCGCTGGTTACTTTAAGCTGAAGAAATTTTTCTCCAGCAAAAATCTCTTGGCTTCCCCATCCCCCTCTGGCACCGGCACCACCAGGTCCACAGCCGTCGCCGCCGCCGCTGCATCGGTATCTACAGCGGGTGTCAACGGTTGTAGGAGCAGAAGAAGACCCACTCCAGCTTTTGGAAATAAGAAGAAGGGTGTTTGTGAAAATGGGAATTGTGAATCATTAAGCGTTGTGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAGGGCGGAGAAGAAAGAGGGGAAATGGAGAATCTTTGGAAGAGGAGGTCAGGTGGAATTGTATTACAGGGCTTGCAGATTCAGCAGACTCATGTTCCGAAGCATCGGCTTCAGATTACGACTGTTTGA

Coding sequence (CDS)

ATGGGTGACAGATACAATCGGTTTAATCCATCAAATATTCGTCAGAAAAACATGTTCTTGCCGATGCTCTGTTCTAAGCCGGCGACCAAAGACTGCCGGCCGCCGAGATGCGACCGGGACCGTTCGGAGTCATTTTCCGGCGACCCTTTGTCGCCGAGAATCGGATGTATGGGTCAAGTGAAGCGGAATAACAGAGTTGCAGGTCTTCCAATTTCCCATAGGATTTTGATTACGACCAAAAATGAGAACAGTCCCACCGCTGGTTACTTTAAGCTGAAGAAATTTTTCTCCAGCAAAAATCTCTTGGCTTCCCCATCCCCCTCTGGCACCGGCACCACCAGGTCCACAGCCGTCGCCGCCGCCGCTGCATCGGTATCTACAGCGGGTGTCAACGGTTGTAGGAGCAGAAGAAGACCCACTCCAGCTTTTGGAAATAAGAAGAAGGGTGTTTGTGAAAATGGGAATTGTGAATCATTAAGCGTTGTGGATTTGGATCCGCCGTTGCCGGTGGTCCGGCGAGTGCAGAAGGGCGGAGAAGAAAGAGGGGAAATGGAGAATCTTTGGAAGAGGAGGTCAGGTGGAATTGTATTACAGGGCTTGCAGATTCAGCAGACTCATGTTCCGAAGCATCGGCTTCAGATTACGACTGTTTGA

Homology

[Close]

BLAST of CmoCh04G024250 vs. TrEMBL
Match: A0A0A0KN75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G387980 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-83
Identity = 168/226 (74.34%), Postives = 182/226 (80.53%), Query Frame = 1


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGD+Y+RFNP  +  K++FLPMLCSKPA KD RPPRCDRDR +S S DPLSPRIGCMGQV
Sbjct: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE------NSPTAGYFKLKKFFSSKNLLASPSPSGTG--T 120
           KRNNRVAGLPISHRILITTKN       N+P  GYFKLKKFFSSKNLL SPS + TG  +
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120

Query: 121 TRSTAVAAAAASVSTAGVNGCRSRRRPTPAFG-NKKKGVCENGNCESLSVVDLDPPLPVV 180
           TRST     A S+STAGVNGC SRRR  P  G   KK V ENGNC SL+V+DLDPPLPVV
Sbjct: 121 TRST----TAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVV 180

Query: 181 RRVQKGGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
           RRVQK GEER E ENLWKRRSGGIVLQ L+IQQTH+PKHRLQITTV
Sbjct: 181 RRVQKAGEERRETENLWKRRSGGIVLQNLEIQQTHLPKHRLQITTV 222

[Close]

BLAST of CmoCh04G024250 vs. TrEMBL
Match: W9QZ55_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014941 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.8e-39
Identity = 109/224 (48.66%), Postives = 132/224 (58.93%), Query Frame = 1


Query: 1   MGDRYNRFNPSNIRQKN-MFLPMLCSKPATKDCRP-PRCDRDRSESFSGDPLSPRIGCMG 60
           MG  +NRF+   + Q+N +FLPMLCS+PA KD    PRC  DRS S S DPLSPRI C+G
Sbjct: 1   MGPEFNRFHHHQVHQRNAIFLPMLCSRPAIKDVHGLPRC-VDRSSSSSSDPLSPRISCIG 60

Query: 61  QVKRNNRVAGLPISHR-----ILITTKNENSPT-------AGYFKLKKFFSSKNLLASPS 120
           QVKR NRV G P  HR     I  TT N N+           Y KLKKFFSSKNL  + +
Sbjct: 61  QVKRKNRVVGFPNPHRSLNALIKNTTNNNNAKNDNHNIHIVKYSKLKKFFSSKNLTPNTN 120

Query: 121 PSGTGTTRSTAVAAAAASVSTAGVNGCRSRRRPTPAFGNKKKGVCENGNCESLSVVDLDP 180
               G  R    A A    + A  NGC          G   +GVC +  C  +SVVDLDP
Sbjct: 121 TPVAGNGRRRVTAPA----NGANGNGC---------CGCSSRGVCNSEKC-VVSVVDLDP 180

Query: 181 PLPVVRRVQKGGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKH 211
           PLPVV+R  +  +E  E+E+LWKRRSGG+ L+GLQ+QQ H P+H
Sbjct: 181 PLPVVKRPIQ-AQEGMEVESLWKRRSGGVTLKGLQLQQIHHPRH 208

[Close]

BLAST of CmoCh04G024250 vs. TrEMBL
Match: A0A061FGZ0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035006 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37
Identity = 97/220 (44.09%), Postives = 136/220 (61.82%), Query Frame = 1


Query: 1   MGDRYNRF---NPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCM 60
           MG+ YN+    +  ++  K  FLPMLCSKP+ KD   P+  +DRS SFS DPLSP+I CM
Sbjct: 1   MGNGYNQHLHHHNMHLHHKGAFLPMLCSKPSIKDVALPKW-QDRSASFSDDPLSPKISCM 60

Query: 61  GQVKRNNRVAGLPISHRILITTKNENSPTAGYFKLKKFFSSKNLLASPSPSGTGTTRSTA 120
           GQVKRNNR+ G P SH++ ITTKN ++ +  Y KLKK FS KNL +SP+     TT +T 
Sbjct: 61  GQVKRNNRIVGFPASHKLTITTKNSSNNSIKYLKLKKLFSGKNLTSSPAT----TTNTTT 120

Query: 121 VAAAAASVSTAGVNGCRSRRRPTPAFGNKKKGVCENGNCESLSVVDLDPPLPVVRRVQKG 180
            +     V   G +      RP    G +        N  S+++ ++DPPLPV+RRV K 
Sbjct: 121 TSCRRKEVLVNGTS------RPKNDDGKE--------NSASINIENMDPPLPVIRRVPKQ 180

Query: 181 GEERGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
           G ++G+ + LW+RRS G+ L+ LQ+QQ  + +H+ + TTV
Sbjct: 181 G-DKGDGDTLWQRRSRGVALKSLQLQQVQLNRHQ-EPTTV 199

[Close]

BLAST of CmoCh04G024250 vs. TrEMBL
Match: F6H0N2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04130 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-37
Identity = 100/217 (46.08%), Postives = 130/217 (59.91%), Query Frame = 1


Query: 6   NRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNR 65
           N+FN  ++  K+ FLP+LCS+P  KD   P      S S S DPLSPR+GCMGQVKRNNR
Sbjct: 3   NQFNHHHLHHKSTFLPILCSRPCIKDVAIPN-----SASSSNDPLSPRVGCMGQVKRNNR 62

Query: 66  VAGLPISHRILITTK----NENSPTAGYFKLKKFFSSKNLLASPSPSGTGTTRSTAVAAA 125
           V G P SHR   T       +N+ +  Y KLKKFFSSKNL+A+P  S +G+ R   V   
Sbjct: 63  VMGFPASHRFTATANATAAAKNANSVKYSKLKKFFSSKNLVATPGGSISGSRRELIVGG- 122

Query: 126 AASVSTAGVNGCRSRRRPTPAFGNKKKGVCENGNCES-LSVVDLDPPLPVVRRVQKGGEE 185
                          RR     G+ K    E+ N  + ++VVDLDPPLPV++RVQ+ G +
Sbjct: 123 ---------------RR-----GSSKIDCHEDENYATVINVVDLDPPLPVIKRVQQRG-D 182

Query: 186 RGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
            G+ E+LWKRRSGG+ L+ LQ+Q  H+P H LQ  +V
Sbjct: 183 GGDSESLWKRRSGGVALKTLQLQPLHLPPHSLQPNSV 192

[Close]

BLAST of CmoCh04G024250 vs. TrEMBL
Match: A0A059BWR2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03740 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.2e-35
Identity = 96/207 (46.38%), Postives = 128/207 (61.84%), Query Frame = 1


Query: 22  MLCSKPATKDCRPPRC-DRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHRIL-ITT 81
           MLCS+P+ +D + P+  D+DRS SFS DP+SP++GCMGQVKRNNRV G P  ++++ IT 
Sbjct: 1   MLCSRPSIRDVKLPKWNDKDRSASFSDDPMSPKVGCMGQVKRNNRVVGFPTPNKLIAITA 60

Query: 82  K-NENSPTAGYFKLKKFFSSKNLLASPSPSGTGTTRSTAVAAAAASVSTAGVNGCRSRRR 141
           K N N+    Y KLK+ FSSK LLAS          +T   AAAA  + AG   CR RR+
Sbjct: 61  KANVNNSLNKYVKLKRLFSSKGLLAS----------ATTSPAAAAPATAAGC--CRGRRQ 120

Query: 142 PTP---AFGNKKKGVCENGNCESLSVVDLDPPLPVVRRVQK-----GGEERGEMENLWKR 201
                 A   KK    EN    S+S++D+DPPLPV+++  K     GG + G   +LWKR
Sbjct: 121 KESNGCAGAKKKCEKTENFVGSSVSILDMDPPLPVIKKASKPAADGGGGDGGGDSSLWKR 180

Query: 202 RSGGIVLQGLQIQQTHVPKHRLQITTV 218
           R GG  L+GL++QQ H P+H +Q  TV
Sbjct: 181 RLGGAALKGLELQQIHHPRHHMQPVTV 195

[Close]

BLAST of CmoCh04G024250 vs. TAIR10
Match: AT1G36940.2 (AT1G36940.2 unknown protein)

HSP 1 Score: 125.2 bits (313), Expect = 5.0e-29
Identity = 83/206 (40.29%), Postives = 110/206 (53.40%), Query Frame = 1


Query: 15  QKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQVKRNNRVAGLPISHR 74
           Q+  FLPMLCS+P+ K+   P            DPLSP+I C+GQVKR+N++ G P +  
Sbjct: 12  QRPTFLPMLCSRPSIKNVTLPAKSHQDDSYQQADPLSPKISCIGQVKRSNKITGFPTT-- 71

Query: 75  ILITTKNENSPTAG--YFKLKKFFSSKNL-LASPSPSGTGTTRSTAVAAAAASVSTAGVN 134
              TT    +P A   YFKLK+ FS KNL  ++P+ + T T+R                 
Sbjct: 72  --TTTSTSITPVAQHRYFKLKRLFSGKNLSFSAPTTTTTRTSRG---------------- 131

Query: 135 GCRSRRRPTPAFGNKKKGVCENGNCESLSVVDLDPPLPVVRRVQKGGEERGEMENLWKRR 194
             R R+     FGNKK  V        + V +LDPPLPVV++   GG      ENLWKRR
Sbjct: 132 --RIRKEE---FGNKKIDV--------IDVAELDPPLPVVKKTHDGGAGDKAAENLWKRR 182

Query: 195 SGGIVLQGLQIQQTHVPKHRLQITTV 218
           SGG  L+ LQIQ   V  H+L++TT+
Sbjct: 192 SGGCQLRSLQIQTNGV--HQLKVTTI 182

[Close]

BLAST of CmoCh04G024250 vs. NCBI nr
Match: gi|659121048|ref|XP_008460478.1| (PREDICTED: uncharacterized protein LOC103499279 [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 3.0e-84
Identity = 169/226 (74.78%), Postives = 182/226 (80.53%), Query Frame = 1


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGD+YNRFNP N+  K++FLPMLCSKPA KD RPPRCDRDR +S S DPLSPRIGCMGQV
Sbjct: 1   MGDKYNRFNPQNVTHKHIFLPMLCSKPAIKDGRPPRCDRDRFDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE------NSPTAGYFKLKKFFSSKNLLASPSPSGTGT-- 120
           KRNNRVAGLPISHRILITTKN       N+P  GYFKLKKFFSSKNLL SPS + TGT  
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVFSKNGNNPNVGYFKLKKFFSSKNLLGSPSTTRTGTVS 120

Query: 121 TRSTAVAAAAASVSTAGVNGCRSRRRPTPAFG-NKKKGVCENGNCESLSVVDLDPPLPVV 180
           TRST     A S+STAGVNGC SRRR  P  G   KK V ENGNC  L+V+DLDPPLPVV
Sbjct: 121 TRST----TAVSISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGPLNVMDLDPPLPVV 180

Query: 181 RRVQKGGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
           RRVQK GEE GE ENLWKRRSGGIVL+ L+IQQTH+PKHRLQITTV
Sbjct: 181 RRVQKAGEESGETENLWKRRSGGIVLRSLEIQQTHLPKHRLQITTV 222

[Close]

BLAST of CmoCh04G024250 vs. NCBI nr
Match: gi|778702467|ref|XP_011655205.1| (PREDICTED: uncharacterized protein LOC105435499 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 3.3e-83
Identity = 168/226 (74.34%), Postives = 182/226 (80.53%), Query Frame = 1


Query: 1   MGDRYNRFNPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCMGQV 60
           MGD+Y+RFNP  +  K++FLPMLCSKPA KD RPPRCDRDR +S S DPLSPRIGCMGQV
Sbjct: 1   MGDKYDRFNPQKVTHKHIFLPMLCSKPAIKDGRPPRCDRDRLDSSSADPLSPRIGCMGQV 60

Query: 61  KRNNRVAGLPISHRILITTKNE------NSPTAGYFKLKKFFSSKNLLASPSPSGTG--T 120
           KRNNRVAGLPISHRILITTKN       N+P  GYFKLKKFFSSKNLL SPS + TG  +
Sbjct: 61  KRNNRVAGLPISHRILITTKNAVLNKNGNNPNVGYFKLKKFFSSKNLLGSPSTNRTGAVS 120

Query: 121 TRSTAVAAAAASVSTAGVNGCRSRRRPTPAFG-NKKKGVCENGNCESLSVVDLDPPLPVV 180
           TRST     A S+STAGVNGC SRRR  P  G   KK V ENGNC SL+V+DLDPPLPVV
Sbjct: 121 TRST----TAISISTAGVNGCGSRRRLAPNSGITGKKSVSENGNCGSLNVMDLDPPLPVV 180

Query: 181 RRVQKGGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
           RRVQK GEER E ENLWKRRSGGIVLQ L+IQQTH+PKHRLQITTV
Sbjct: 181 RRVQKAGEERRETENLWKRRSGGIVLQNLEIQQTHLPKHRLQITTV 222

[Close]

BLAST of CmoCh04G024250 vs. NCBI nr
Match: gi|1009136537|ref|XP_015885579.1| (PREDICTED: uncharacterized protein LOC107420986 [Ziziphus jujuba])

HSP 1 Score: 179.1 bits (453), Expect = 8.3e-42
Identity = 111/233 (47.64%), Postives = 142/233 (60.94%), Query Frame = 1


Query: 1   MGDRYNRF---NPSNIRQKNMFLPMLCSKPATKDCRPPRCDRDRSESFSGDPLSPRIGCM 60
           MG   NRF   NP  I  +N FLPMLCS+P+ KD + P  + +RS SFS +PLSP+IGCM
Sbjct: 1   MGHECNRFHHHNPLYIHHRNTFLPMLCSRPSIKDVKLPNWE-NRSASFSDEPLSPKIGCM 60

Query: 61  GQVKRNNRVAGLPI-SHRILI----TTKNEN-SPTAGYFKLKKFFSSKNLLASPSPSGTG 120
           GQVKRNN+V G P  SHR+ +    TT N N +    Y KLK+ FS KNL    +P+ TG
Sbjct: 61  GQVKRNNKVIGFPASSHRLTLTGSTTTNNNNININVKYSKLKRLFSGKNL----TPAATG 120

Query: 121 TTRSTAVAAAAASVSTAGVNGCRSRRRPTPAFGNKKKGVC--ENGNCES-----LSVVDL 180
           T                   GC SRRR   +  N  +  C   NGN E+     + VVDL
Sbjct: 121 TAA-----------------GCGSRRRVVLSGANGSRNGCNSNNGNGENCIPTIIDVVDL 180

Query: 181 DPPLPVVRRVQKGGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
           DPPLPV+++VQK  E+ GE+++LWKRRSGG+ L+ LQ++Q H P+H LQ TTV
Sbjct: 181 DPPLPVIKKVQK-TEKEGEVDSLWKRRSGGVALKSLQLRQIHHPRHHLQPTTV 210

[Close]

BLAST of CmoCh04G024250 vs. NCBI nr
Match: gi|702379875|ref|XP_010063332.1| (PREDICTED: uncharacterized protein LOC104450462 [Eucalyptus grandis])

HSP 1 Score: 169.9 bits (429), Expect = 5.0e-39
Identity = 103/223 (46.19%), Postives = 139/223 (62.33%), Query Frame = 1


Query: 6   NRFNPSNIRQKNMFLPMLCSKPATKDCRPPRC-DRDRSESFSGDPLSPRIGCMGQVKRNN 65
           +R N  N++ K+ FLPMLCS+P+ +D + P+  D+DRS SFS DP+SP++GCMGQVKRNN
Sbjct: 19  HRNNLHNLQHKSSFLPMLCSRPSIRDVKLPKWNDKDRSASFSDDPMSPKVGCMGQVKRNN 78

Query: 66  RVAGLPISHRIL-ITTK-NENSPTAGYFKLKKFFSSKNLLASPSPSGTGTTRSTAVAAAA 125
           RV G P  ++++ IT K N N+    Y KLK+ FSSK LLAS          +T   AAA
Sbjct: 79  RVVGFPTPNKLIAITAKANVNNSLNKYVKLKRLFSSKGLLAS----------ATTSPAAA 138

Query: 126 ASVSTAGVNGCRSRRRPTP---AFGNKKKGVCENGNCESLSVVDLDPPLPVVRRVQK--- 185
           A  + AG   CR RR+      A   KK    EN    S+S++D+DPPLPV+++  K   
Sbjct: 139 APATAAGC--CRGRRQKESNGCAGAKKKCEKTENFVGSSVSILDMDPPLPVIKKASKPAA 198

Query: 186 --GGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKHRLQITTV 218
             GG + G   +LWKRR GG  L+GL++QQ H P+H +Q  TV
Sbjct: 199 DGGGGDGGGDSSLWKRRLGGAALKGLELQQIHHPRHHMQPVTV 229

[Close]

BLAST of CmoCh04G024250 vs. NCBI nr
Match: gi|703095345|ref|XP_010095512.1| (hypothetical protein L484_014941 [Morus notabilis])

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 109/224 (48.66%), Postives = 132/224 (58.93%), Query Frame = 1


Query: 1   MGDRYNRFNPSNIRQKN-MFLPMLCSKPATKDCRP-PRCDRDRSESFSGDPLSPRIGCMG 60
           MG  +NRF+   + Q+N +FLPMLCS+PA KD    PRC  DRS S S DPLSPRI C+G
Sbjct: 1   MGPEFNRFHHHQVHQRNAIFLPMLCSRPAIKDVHGLPRC-VDRSSSSSSDPLSPRISCIG 60

Query: 61  QVKRNNRVAGLPISHR-----ILITTKNENSPT-------AGYFKLKKFFSSKNLLASPS 120
           QVKR NRV G P  HR     I  TT N N+           Y KLKKFFSSKNL  + +
Sbjct: 61  QVKRKNRVVGFPNPHRSLNALIKNTTNNNNAKNDNHNIHIVKYSKLKKFFSSKNLTPNTN 120

Query: 121 PSGTGTTRSTAVAAAAASVSTAGVNGCRSRRRPTPAFGNKKKGVCENGNCESLSVVDLDP 180
               G  R    A A    + A  NGC          G   +GVC +  C  +SVVDLDP
Sbjct: 121 TPVAGNGRRRVTAPA----NGANGNGC---------CGCSSRGVCNSEKC-VVSVVDLDP 180

Query: 181 PLPVVRRVQKGGEERGEMENLWKRRSGGIVLQGLQIQQTHVPKH 211
           PLPVV+R  +  +E  E+E+LWKRRSGG+ L+GLQ+QQ H P+H
Sbjct: 181 PLPVVKRPIQ-AQEGMEVESLWKRRSGGVTLKGLQLQQIHHPRH 208

The following BLAST results are available for this feature:

BLAST of CmoCh04G024250 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G024250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN75_CUCSA	2.3e-83	74.34	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G387980 PE=4 SV=1	[more]
W9QZ55_9ROSA	7.8e-39	48.66	Uncharacterized protein OS=Morus notabilis GN=L484_014941 PE=4 SV=1	[more]
A0A061FGZ0_THECC	1.9e-37	44.09	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_035006 PE=4 SV=1	[more]
F6H0N2_VITVI	1.9e-37	46.08	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g04130 PE=4 SV=...	[more]
A0A059BWR2_EUCGR	5.2e-35	46.38	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03740 PE=4 SV=1	[more]

BLAST of CmoCh04G024250 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G36940.2	5.0e-29	40.29	unknown protein	[more]

BLAST of CmoCh04G024250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121048\|ref\|XP_008460478.1\|	3.0e-84	74.78	PREDICTED: uncharacterized protein LOC103499279 [Cucumis melo]	[more]
gi\|778702467\|ref\|XP_011655205.1\|	3.3e-83	74.34	PREDICTED: uncharacterized protein LOC105435499 [Cucumis sativus]	[more]
gi\|1009136537\|ref\|XP_015885579.1\|	8.3e-42	47.64	PREDICTED: uncharacterized protein LOC107420986 [Ziziphus jujuba]	[more]
gi\|702379875\|ref\|XP_010063332.1\|	5.0e-39	46.19	PREDICTED: uncharacterized protein LOC104450462 [Eucalyptus grandis]	[more]
gi\|703095345\|ref\|XP_010095512.1\|	1.1e-38	48.66	hypothetical protein L484_014941 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024250.1	CmoCh04G024250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36323	FAMILY NOT NAMED	coord: 13..117 score: 9.0E-41coord: 134..217 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G024250	Cucsa.034460	Cucumber (Gy14) v1	cgycmoB0019
CmoCh04G024250	CmaCh04G023200	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G024250	CmaCh15G007180	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G024250	Cla002142	Watermelon (97103) v1	cmowmB670
CmoCh04G024250	Csa5G387980	Cucumber (Chinese Long) v2	cmocuB740
CmoCh04G024250	MELO3C022789	Melon (DHL92) v3.5.1	cmomeB626
CmoCh04G024250	ClCG03G009070	Watermelon (Charleston Gray)	cmowcgB647
CmoCh04G024250	CSPI05G14440	Wild cucumber (PI 183967)	cmocpiB749
CmoCh04G024250	Lsi09G009700	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G024250	Cp4.1LG13g05100	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G024250	Cp4.1LG01g20070	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G024250	MELO3C022789.2	Melon (DHL92) v3.6.1	cmomedB715
CmoCh04G024250	CsaV3_5G023550	Cucumber (Chinese Long) v3	cmocucB0876
CmoCh04G024250	Cla97C03G060230	Watermelon (97103) v2	cmowmbB719
CmoCh04G024250	Bhi12G001114	Wax gourd	cmowgoB0822
CmoCh04G024250	Carg18243	Silver-seed gourd	carcmoB0716
CmoCh04G024250	Carg01490	Silver-seed gourd	carcmoB1121

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G024250	CmoCh15G007370	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G024250	Wax gourd	cmowgoB0915
CmoCh04G024250	Cucurbita moschata (Rifu)	cmocmoB366
CmoCh04G024250	Cucurbita maxima (Rimu)	cmacmoB482
CmoCh04G024250	Wild cucumber (PI 183967)	cmocpiB718
CmoCh04G024250	Cucumber (Chinese Long) v2	cmocuB708
CmoCh04G024250	Melon (DHL92) v3.5.1	cmomeB698
CmoCh04G024250	Watermelon (Charleston Gray)	cmowcgB626
CmoCh04G024250	Watermelon (97103) v1	cmowmB667
CmoCh04G024250	Watermelon (97103) v1	cmowmB726
CmoCh04G024250	Cucurbita pepo (Zucchini)	cmocpeB697
CmoCh04G024250	Bottle gourd (USVL1VR-Ls)	cmolsiB616
CmoCh04G024250	Bottle gourd (USVL1VR-Ls)	cmolsiB664
CmoCh04G024250	Cucumber (Gy14) v2	cgybcmoB523
CmoCh04G024250	Cucumber (Gy14) v2	cgybcmoB654
CmoCh04G024250	Silver-seed gourd	carcmoB0926
CmoCh04G024250	Cucumber (Chinese Long) v3	cmocucB0835
CmoCh04G024250	Watermelon (97103) v2	cmowmbB701