Cucsa.032980 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.032980
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	ATP-dependent DNA helicase RecQ family protein
Location	scaffold00429 : 2244820 .. 2254293 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTACATATGGTTTTCATGTTATTTACCAATTGATCACCGATCTTGCAGGTATTCTGTGATTCCAAAGACTAAGAAATGCGTGGATGATATTGATAAATTCATCAAAGAAAGCCACTTTGATGAATGTGGGATTGTTTACTGTCTTTCAAGAATGGACTGTGAAAAGGTTGCTGAAAGGTTACAGGTTGGTTTTCTCAGTCTATTTATATATCTGAAACTTTTACAGCTGGATGCTATCAGTAATAACACGAATATACAGATTGAAGAAAACAATAATCAACTATCTACAACCAAGGCTCTCCAATTCCAAACCCTTTTTTTtCCAATGGAAACATAAGATTGGAAATTATAGAGATAAATTTAtCcATTCACACAAGAGTAAAATGTCCAAAAAAaGgCGTACTATATAGTTGTGTTGGATATATAACTGTCGGTGATATATAATTAAAtttgccttcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATATTTTAAACCcACAAGTGAGGGGgAGTGTTGGTGATATATAATTAAATTTGCCTTCAACCACTAGCTTAAGCTTTTGGATGAATTGGTGGTTTAATAATAACTAAACTTACTTTCATCTATCAGCTTAAACTTTTGGGTCAATTGGTGATTTAAGATGACATCAGAGTAGGTGGTCAAGTGAGCTCCTGTATCCAGGCGCCTACAATGTTATTTCCTCTGTACTTAGACTTTATTTCCAATTGTTAGGTCATTCACATATTTCATGCCCACAAGTGACGGGAAATGTTAGTGGTATATAATTAAATTTGCCTTCACCCATCAATTTAAGCTTTTGGGTCAATTGGCGATTTATGAAATTGAAAATTGAATTTAACTTTGAAGACAAAAGTTGCTCTTGGATGTTTTGATTCAGCTCATATTAAAGCTTATTCTTGCTGCTTTTTCAAATAGTTTTATGGTTTAGTTTTTtCTTGTATAGCGTTTGTTTGATTTGAAATGCTTTTATTTTTGCTTTGTAATTTTCATTTCTTTTCAATCTTTTTGGTTGCTGTATATTTTGAGCAGTCTCTCCTCTTTTCTTTATCGAAAAGTGTTGTTTCATATATTAGTGCATGTTTGAGAGTACATTTGAAATGGTTAAAATCACTTGTCATGTTCAAAATTATCCCGAAACACATCTATAGTCACTCAAAATTAATTTAATACTTAAaTTTACCCTTTCAAATGCAATTTTCGTTTGAAATGGTTAAAATCACTTTTGTCATGTTCAATTATTGCGAAACACATCTACTACTACTACTCCTGCTGCTACTCCTACTCCTACTGGCTACTGCTATTGCTACTGCTCCTATTGCTACTGCTATTGAAGCATGGAGGGAAAAGTTAAAATGCACTGAATCTCAAACAATCTTCCTTCAAACCATAGAACTACGAAGAAACCCCTTCTAACATCCCATGGATATCTGATTTTTACTCGTAGGTTAAATCAAAAGCTTGCAAAAGACACCTATACGCAACCACAAAAATGACCTGGATTCTCAGCGTTGCATCTATTGTTATGTGCTTTTTGAAGTTGACAACAGTGATTAAAATATGTACATCCAACTTAAACCGATTACTTTTCAGGAATGTGGGCATAAAGCAGCCTTTTATCATGGTAGCATGGATCCTGCCCAACGCTCCTTCATTCAGAAGCAATGGAGCAAAGATGAAATTAATATAATTTGCGCTACAGTGGCTTTTGGAATGGGTATAACTGATTATTGCTTGTCGAAGTTTGAATTTGTATGGAAATAACAATCAACTATGCACTTATTTGGATATTTCAGGCATCAACAAGCCAGATGTTCGGTTTGTCATTCACCATTCTCTTCCAAAGTCAATTGAAGGGTACCATCAGGTAATTACTTGTATACTGCTTCATTCAGTTGGTATTGTCCATGTTAATAGTCTTGATTCAAAATATTTTTAATTCATCTTGAGAACATAAAAaCTACAATTGGTTTTGCTGTATCcCCCCCcAAACAGTGCTTCATAGAGCTGCTGGATTATTGATTATATTGTTTCCTATTATATCGTTTGCTTACTGTGTGTTTCTAATGTTTTAGGAGTGTGGCCGTGCAGGCAGAGACGGTCTGCGTTCATCTTGTGTGTTATATTATAGTTACAGTGATTATGTAAGTTGTGATCATGGACTAATGTCTTACTTTATCTGGCTGTAAAGGGTATAATATTACATTCACAAGGTTTTTGAAAAGTGGGTTGGATTCTAGTATCCATTGCTTATTGCATACCAGCTCTTAAACCGATGAGTGAAGGCAAATTTAATATAACATCTAACACTTGCGTTTGTCAAAACTTCTTGAACATGTATGCAGATACGAGTCAAGCATATGATTAGTCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATCGTACCAATCTGGGCAGCTCTGGAAGGATACTAGAGACCAACACTGAGAATCTTTTGCGAATGGTAAGTGAATTCTACCATTCTTTTGTTCCTTTTTTtAAAAGATATTATTAGAATATTAAATCTCAATCAATTTATTCCTTATTTTAGGTGAGTTACTGTGAAAATGATGTTGATTGCCGGCGTTTGCTCCAACTTGTCCATTTTGGGGAGAAGTTTGATCCTGGAAATTGCAAGAAAACATGTGATAATTGTTTGAAGTCCACGAATCTTATAGAAAAGGATGTCACTGATATCTCTAAGCAACTGGTCTGGTGCAAAAATTTGCCGTGTTTTAAAATGTTCTGTTAAATTTACTTTATTATACATTGTTAAGTTAATTCAAAAACGGATTTGTATGGTTAAATTTTGTTTATCTTGAAGGTTGACTTGGTGAGGTCCATGGGACAGCAATTTTCATCCGCTCACATACTTGAAGTCTACAGGGGTTCCTTGAGCCAATTTGTGGGTCATGATATAAACTTGTGTTTTTTCTGTTAGCTTCAAGTGGGGTATTATTCTAATTGCCTTTTATTGACAAAAAATAGGTGAAAAAACACAGACATGAAAAATTGAGTCTGCATGGTACTGGAAAACATCTTTTGAAAAGTGAAGCTTCTCGCATATTGCACCATCTTGTTATTGAGGATATCCTTGTTGAAGAAGTGAGGAAAAGTGATATTTATGGATCTGTTTCATCCCTATTGAAGGTGATAAACCAATTGCTTCGTTCTTTATGCTAAATAGAAAAAaTGATTCTAAGCTTGTTATCTTCTTTCTTCTTTTGGCCTTTTCTAATTCTTAGTTATGATATTTCAATCTGTCCTTAGGTGAACGAAACCAAGGTTCGAAGTCTTTTAAATGGAGGGCAGAGAATTAAATTAAGGTAGCATTTTCTTCCTTCTAACAGTAGTTTGTGTGCAATTTCTATGATAAGTTACAAGTCGTAAGTGAATGCAGTATTCATATTTATGGCATATGTATTGGCTTTGAAGTGATGTGTGATCTAGCTATCATCCGTTTTCCTTTTtAAAAAAAaCCTGAAACATGTGTTAGTAAAAGAAATTGCGAAAGGAGAGGATGACAAGGTGTCCTGATCCACTAGATAAGTCATATAGGAGATCATGAAAAGACTCTCTATTGATTTTTCACATGTAAAAGAAAAAAGTCAGCTCTTTAGCGAGAGTACTTATAACCTATCTTTCACTGAATGTGAGAAAATAATTGAATTTTATGCATAGAAAAAGCAAAAGAACCATTGAAGTATATACAGATGCTGGGTGGGTTCTGGCATAATGCACTTTCTAATGTTAAGTTTGTGGAGGGAAGGGGCAAGTCTTCATTGAATAAGAACGTGAATTATAGTGACTGGTAAGTTTAGTAAGAGCGATCAGTTGTTGGGAATAATTGGTTAAGGAAATAAAGGAGAATTTTCAAGGGTGCAAGGGGTCTTGGGAGGAGGTCTTAAGTCTGCAACACTAGATACTTCCCTCAGAGTTGTTTTCAACTAAGTTTGTAACTCTGTGTATGTGTTTTTTTTCTTTTGGTTTATTATTTATTTTATTTTtATAATTATTATAAAGAAACCCAAATCTCTTATTTTGTTTTCCGTGTAGGGCTTCTCTTGCTTAATTTTCAGTTGTGCTTTGAGTGTCACTCTCTTTTATATTTCCTTTCTTCTTAGTAAAAGTTAATTTTCCAGTATAGTATAGTGGTTGTCTCTTGTCTTGTATCTGAACTTTTCTTTTGTTTTATCTTTGTAACTTGAGTAATAGTTTCTTTTCATTACTTTAGTGAAAAAACTTCATTTTCTTTTCAAAAAaGAAACAAAAGTTAATTTATTGGTTCAAGAAATCTTGCATCTTCTCATGATTTATAAAATTTTTCTGTAGCCATGCCGGGCTTTAGCCTTGCAGTTAGGATGAGGTGATGCTTGCTATATTAGAAAAATATGTCACCATAATTACTGGATGAACTAGAAATGTATGGTTTTTCTTGTACAGCTGTACTGTTAGAATTTGATATATTCAGTTGTTTCATATGTGTAAATTCATTTGCTAAATCATTAGGAACAACAAAAAaCATTGTTCAGTTATTTATTTATTTTTtGTGAGTCATTAGCAATTCCTATTGCTTTAAACACATGTTTGATACAGAATGCATGGTTACAAGGCTTGTGAGAACACAAAATAATGTATTGGGCAGACCGTTGGGAATAATCCATAATAACCCAATAGGTTTGCTGTTGTGTTGAAGTCATTCTATTGGTCCGAACTAATTCCAAAAGCAAAAaCGGAAAGGCTTGTCCTGCTGCCACTCTTTTCTGTTCTCTTTATTGATTGTCTTTTAACTCATCTATAAGCTGTATTGTTCTTGCGCTACATCTTGGCTTAGCACTTGAGACTTGACAGCTAATTTGTTTCCTCTGGTACATGACACACTTGCCAGGTTTCCATCATCTACAAAAaCAAATAAACTGAGCAAATTTGAAATGACTCCAGCTAAAGGTTCTTTGGTATCTGGAAAAATGTATCCTAATGTCGACACTCCTGCCCAGCCTCAATCTGAAGTTGATGTGGTAATTTATAAATCCTTTGCGTAGCATTAAGCAACATGGTTTTTTCTTGATGTTTGTGCTGTACAGTTCGTTACTTGGTTTGTTCCTGAGGGGAAAAATGATTTTGTTTTCTTACTGCAGCAACTCTCAGCAGAATTATATTCCTCTTTGAGGATGCTTCGAACTAATCTCGTTAAAGAGGCTGCTGATGGTGTTATGGCGTATCATATATTTGGGTAGGTTCCTTTTCACTTTGTTAGCTCCTTTAAAGATGTCTCTCTCTCTCCCCTTCATTTTTCTGAAAAGAAACTTGGTTACTATAGCCTAAAACTAATAACCAGAGAAATTTGGAGAAGATTTCTAATCCTGGTTATTGGAGACCTCAGAAAGGGTCTCTAATTTTGTTATATTTCAGGATAGAACTAAAGAGATCTTTGATGTCCAAAAATAAACAACAGAAAATTATTTGACGTCATACACTTGGGACACTTAAATATTTCTAGGATTCTTCTATTTCTCTTCTCAAATGTCCCAAACACTTTTTTACTCTCGAGTCAGTGGTTAACGAGGTCCTTCCATATGGATGAAGATAATGAGATAAATGCTGAAGTTGGCTCATATCTTCCTTTGCCACCTCGCACAAATCATATCTCAAGGACATGAATGTGCGTTTCTGTATGTTCTGACTAATTATCTGTCACTTTTGCTTCTGTTCACCATTTCTTAGATGAGGTTGGATCTATTGTTGATATTTTGGTATATAAGTGGGTGAAGATTATTTTCGTGTTTAATGATCATTGTTTGGTGCTTCTGAAAGTAGCATCAAACTTCTTTTAGGAGAAGCGCAAGAAAAGATATGTGTAACTACTAAGTGTTTGTACTTAGGAAGACGTACCCAACTCATATAGTGAGTTGGTTGGTCAGTAGCACTGACTTCTATGGTCAGTTGGCCATTAGTTGCAGGGAGGAGAACAAGAAGAGATGCGTAGGGAAGGGAAGAGGGCATGGAGGATGAAAAAGATATAAGATGACTTGTCACTATACAGATGTTAAATGAAAAGCACATGCAAATATTGTAACTGCAAAATACTAATAACAAGAGAGCAAGTAAAGTCACGTAGAAGTTGGTAACCTAGTTTAGTGAAATCCACCTACGTCTGAAGTGCAGCATGCCTAGACAAGATAATCCACTAGTATAGAGTCAAACAATTACAACTTGGTACTTATTTGCAATACAATAACTACTACAACTACTCATGTAGAGCCCACTCGCAGATCACCTAGATTTCCCCTAGATGTGAGATTTCCTCTCAATGAACTTAGGTTCCCCCTAAGTATAGGAATATTAGTGAATGATCACTTAGACTCCCCTCAATGTGGGACTCCCTCTCACTAAGACTGTTATTTTtCCTCCAAATGAAGACCACTCCACTTGATGAACTTAGGCCTCCATTGAGTTTGATAAACCCTTCTCAAGTTGATGAAGAACAAATCAACAAGATCTAGAGAATTACTCAAGATTGACAATGACAAAAGCTTTACTATCTAATGAAATGACATACTTGTGTTCTTCGGCACAAACACAGCACAATGACAAGAATATTCTTAAAAAACGATCTACCCTAAAATTGAACAAGACACTATATCTTTGTGTATGAATGTATATGAGTAGCTTTGAGAATATCTTTTTGGGAAGAATAAATCAACTCTAAGGAAAAATACAACATATCACGAAATCTAGGAAATACTATTGATAGACAAGGAAAAAATCTTTGCAGAATCTACTGCCTTTCACGTTACAGATGTCATTGAAAAAGTTATAACATCTTGTGAGACATGTTATAGAAACATGTTCAAGTGTTGCCTGTAATAAATAAGGCAACTATATTGCAATAACACCCTAGCAAAGGACATGGTAGTAGAGTAGTGGCATGTTTGAAACCAATTTTAGAGTGACTAAAATCACTTTTGACATGTCGAAAATCTTTCTTTTTGTCTAATGGTTTTtAACTCTAGTTTTTTtCTCAATTAATTTTTtACTCTTTCTCTAATGTTTTGCTCTTGATTTTTTCTGCCTCACTCTTAAATTTTTCTCTCTTTGAAGTTATTCTCCAAATTTTTTTATATCTTTCTAACTTTATTTTACTATCTTCACATTTTTATCGTCTACTAAATTTCTTGTCAGACTAACATTTATTATTACTTTTGAAAATTTTCTCTAGCTCTCTATTTTGTTTCTTTAAACTTTCATATTTCTCTCAATAAAATTCTCTGCCTCTAATTTCTAGTGATTTGATGATTCTAGAACTATCTTTGGAAACTAACATTAATCACTTAAAAATATTTTAAATTGAATTAAAATTATATATATAAGTATGGAACTTTAACATGATTTGTCACACTTTTACAAAACTAATTATATTAAATTATTCAGCTCAAAATACCGATTCCAAAAGTTAATCTCAAACATTCCCTTCAAGTCATTGTAAAAAAAaTAAAaTAAAGCAAAATAAGACCAAAAAAAAAaGAAAAAAAAaCATTGAAAATAACTCTTAAAAAGCTTAGAACAAACATTCTATGTTAATAAGAAAATCACTTGTGAATAATTAAAATTTGTTAAAATCACTTTCTAAAAACACTCCGAAGTATGTCTTTAAAGTCCTACAATTTGTAAATAAATACAATTAATTGTTCTAGAGTTGGTGATCTATGTTAATACTTTTTATTTATGCAATTGGATGGTGTTGAGTGTCACTTTTAAAATTGCTGTCCTGTAATTTTGTAACTTCTTTTTGACCTGATATATTTTTCTTTCGTTTTGAACTGCAGTTAAGCTGCATCATGGTTTTGTTATGATATTGTTTTTTtCTTTTTAATTTCTATTTACGTTCAATTTTCTTCGTGACGTGCTGATTAGTTGATTACATTTCTTCTCTCCATACAGAAATGCTACGTTGCAGCAGATAAGCCGAAGAGTTCCCAGGTCGAAAGAAGAATTACTTGATATCAACGGCATTGGCAAGTAAGTTTCCAGGCTTCTTGTCTTCAAAAATTTAATTTAGTCTGTAGCACAAAACATTTGACAAAAAaTATCTCCTTAATTTAGGGCTAAGGTAAGCAAGTACGGTGACCGTATTTTGGAAACCATAGAATCTACCATCAAGGAATTCTATGGAGCAGGGAAAAATGGAAGCAACAGTAATGACAGTAACGATTCTGGAAAGAGAAGAAGAGGTGGAAATAAAGATAAAGATGAATATTTAGATGAAAATGATGCCACTAAAAGCTTTGATAGATCAAAGAAAAGGGCAACAAATATTCAGAACAAAGATCCTAATGTCCATAATTCTTCTATGCCGGAACATCCAGATCAATTCTTTGACAGTGAGCTCGATTTCGATGACAGTCATTATGAAATTCGTGACTTGGAGCTAAACAATAACCTGGATCATGGTAATGATGGAAGAGTGTTACCGTCATGGTCATGACAGAAATTCTGGTTGGTAACTATATAGTTTTAGATGAAAAATGTATGATTGTTCAGGTTGTTTTTAATGGTATATAATTGAAGGTGAAGCCATCCTGGGGGGAGGTGAAGGGAGTTTTAATTTATACAAATGGTGCTTGAAACTTGGAACAGAGCAATGAAATTGAAATGAAACCAACCTTTCACCTGCTACAAATACATTGTAAAATGTATGAAGCTTCAACTGCAAGGTTGCAACTTGAGAATTAATGGCAAAAAATTCACATCTCATTGTTGAAGATGAAAGGATTGGTGGTAAAAGTTCAAGAGAGACTCAACAAATGTCGCTGAGATTGTGGAATCACTTTCTAGGTGATTGATGCTAATTAATGTGTTCGAATTAGTATGGCCCAAATGCTAATGGTAAATATTGATTCAAGGATTAATATTCAACTGTTAGGCAATGTTTGATTAATAGATGAAGAGCTGACTCTTCAAAAGAATGTTTAAAATGTACACATTTGACATTCTGAAAAAAGGTCCTTTGAGTACATCTTTTATATTTATTAAATCTCATCTTCATGTACTTTGCTGACACTAATCCCAAGAATGTAAATAACCATTGACAACC

mRNA sequence

atgatttacatatggtTTTCATGTTATTTACCAATTGATCACCGATCTTGCAGGTATTCTGTGATTCCAAAGACTAAGAAATGCGTGGATGATATTGATAAATTCATCAAAGAAAGCCACTTTGATGAATGTGGGATTGTTTACTGTCTTTCAAGAATGGACTGTGAAAAGGTTGCTGAAAGGTTACAGGAATGTGGGCATAAAGCAGCCTTTTATCATGGTAGCATGGATCCTGCCCAACGCTCCTTCATTCAGAAGCAATGGAGCAAAGATGAAATTAATATAATTTGCGCTACAGTGGCTTTTGGAATGGGCATCAACAAGCCAGATGTTCGGTTTGTCATTCACCATTCTCTTCCAAAGTCAATTGAAGGGTACCATCAGGAGTGTGGCCGTGCAGGCAGAGACGGTCTGCGTTCATCTTGTGTGTTATATTATAGTTACAGTGATTATATACGAGTCAAGCATATGATTAGTCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATCGTACCAATCTGGGCAGCTCTGGAAGGATACTAGAGACCAACACTGAGAATCTTTTGCGAATGGTGAGTTACTGTGAAAATGATGTTGATTGCCGGCGTTTGCTCCAACTTGTCCATTTTGGGGAGAAGTTTGATCCTGGAAATTGCAAGAAAACATGTGATAATTGTTTGAAGTCCACGAATCTTATAGAAAAGGATGTCACTGATATCTCTAAGCAACTGGTTGACTTGGTGAGGTCCATGGGACAGCAATTTTCATCCGCTCACATACTTGAAGTCTACAGGGGTTCCTTGAGCCAATTTGTGAAAAAACACAGACATGAAAAATTGAGTCTGCATGGTACTGGAAAACATCTTTTGAAAAGTGAAGCTTCTCGCATATTGCACCATCTTGTTATTGAGGATATCCTTGTTGAAGAAGTGAGGAAAAGTGATATTTATGGATCTGTTTCATCCCTATTGAAGGTGAACGAAACCAAGGTTCGAAGTCTTTTAAATGGAGGGCAGAGAATTAAATTAAGGTTTCCATCATCTACAAAAACAAATAAACTGAGCAAATTTGAAATGACTCCAGCTAAAGGTTCTTTGGTATCTGGAAAAATGTATCCTAATGTCGACACTCCTGCCCAGCCTCAATCTGAAGTTGATGTGCAACTCTCAGCAGAATTATATTCCTCTTTGAGGATGCTTCGAACTAATCTCGTTAAAGAGGCTGCTGATGGTGTTATGGCGTATCATATATTTGGAAATGCTACGTTGCAGCAGATAAGCCGAAGAGTTCCCAGGTCGAAAGAAGAATTACTTGATATCAACGGCATTGGCAAGGCTAAGGTAAGCAAGTACGGTGACCGTATTTTGGAAACCATAGAATCTACCATCAAGGAATTCTATGGAGCAGGGAAAAATGGAAGCAACAGTAATGACAGTAACGATTCTGGAAAGAGAAGAAGAGGTGGAAATAAAGATAAAGATGAATATTTAGATGAAAATGATGCCACTAAAAGCTTTGATAGATCAAAGAAAAGGGCAACAAATATTCAGAACAAAGATCCTAATGTCCATAATTCTTCTATGCCGGAACATCCAGATCAATTCTTTGACAGTGAGCTCGATTTCGATGACAGTCATTATGAAATTCGTGACTTGGAGCTAAACAATAACCTGGATCATGGTAATGATGGAAGAGTGTTACCGTCATGGTCATGACAGAAATTCTGGTTGGTAACTATATAGTTTTAGATGAAAAATGTATGATTGTTCAGGTTGTTTTTAATGGTATATAATTGAAGGTGAAGCCATCCTGGGGGGAGGTGAAGGGAGTTTTAATTTATACAAATGGTGCTTGAAACTTGGAACAGAGCAATGAAATTGAAATGAAACCAACCTTTCACCTGCTACAAATACATTGTAAAATGTATGAAGCTTCAACTGCAAGGTTGCAACTTGAGAATTAATGGCAAAAAATTCACATCTCATTGTTGAAGATGAAAGGATTGGTGGTAAAAGTTCAAGAGAGACTCAACAAATGTCGCTGAGATTGTGGAATCACTTTCTAGGTGATTGATGCTAATTAATGTGTTCGAATTAGTATGGCCCAAATGCTAATGGTAAATATTGATTCAAGGATTAATATTCAACTGTTAGGCAATGTTTGATTAATAGATGAAGAGCTGACTCTTCAAAAGAATGTTTAAAATGTACACATTTGACATTCTGAAAAAAGGTCCTTTGAGTACATCTTTTATATTTATTAAATCTCATCTTCATGTACTTTGCTGACACTAATCCCAAGAATGTAAATAACCATTGACAACC

Coding sequence (CDS)

ATGATTTACATATGGTTTTCATGTTATTTACCAATTGATCACCGATCTTGCAGGTATTCTGTGATTCCAAAGACTAAGAAATGCGTGGATGATATTGATAAATTCATCAAAGAAAGCCACTTTGATGAATGTGGGATTGTTTACTGTCTTTCAAGAATGGACTGTGAAAAGGTTGCTGAAAGGTTACAGGAATGTGGGCATAAAGCAGCCTTTTATCATGGTAGCATGGATCCTGCCCAACGCTCCTTCATTCAGAAGCAATGGAGCAAAGATGAAATTAATATAATTTGCGCTACAGTGGCTTTTGGAATGGGCATCAACAAGCCAGATGTTCGGTTTGTCATTCACCATTCTCTTCCAAAGTCAATTGAAGGGTACCATCAGGAGTGTGGCCGTGCAGGCAGAGACGGTCTGCGTTCATCTTGTGTGTTATATTATAGTTACAGTGATTATATACGAGTCAAGCATATGATTAGTCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATCGTACCAATCTGGGCAGCTCTGGAAGGATACTAGAGACCAACACTGAGAATCTTTTGCGAATGGTGAGTTACTGTGAAAATGATGTTGATTGCCGGCGTTTGCTCCAACTTGTCCATTTTGGGGAGAAGTTTGATCCTGGAAATTGCAAGAAAACATGTGATAATTGTTTGAAGTCCACGAATCTTATAGAAAAGGATGTCACTGATATCTCTAAGCAACTGGTTGACTTGGTGAGGTCCATGGGACAGCAATTTTCATCCGCTCACATACTTGAAGTCTACAGGGGTTCCTTGAGCCAATTTGTGAAAAAACACAGACATGAAAAATTGAGTCTGCATGGTACTGGAAAACATCTTTTGAAAAGTGAAGCTTCTCGCATATTGCACCATCTTGTTATTGAGGATATCCTTGTTGAAGAAGTGAGGAAAAGTGATATTTATGGATCTGTTTCATCCCTATTGAAGGTGAACGAAACCAAGGTTCGAAGTCTTTTAAATGGAGGGCAGAGAATTAAATTAAGGTTTCCATCATCTACAAAAaCAAATAAACTGAGCAAATTTGAAATGACTCCAGCTAAAGGTTCTTTGGTATCTGGAAAAATGTATCCTAATGTCGACACTCCTGCCCAGCCTCAATCTGAAGTTGATGTGCAACTCTCAGCAGAATTATATTCCTCTTTGAGGATGCTTCGAACTAATCTCGTTAAAGAGGCTGCTGATGGTGTTATGGCGTATCATATATTTGGAAATGCTACGTTGCAGCAGATAAGCCGAAGAGTTCCCAGGTCGAAAGAAGAATTACTTGATATCAACGGCATTGGCAAGGCTAAGGTAAGCAAGTACGGTGACCGTATTTTGGAAACCATAGAATCTACCATCAAGGAATTCTATGGAGCAGGGAAAAATGGAAGCAACAGTAATGACAGTAACGATTCTGGAAAGAGAAGAAGAGGTGGAAATAAAGATAAAGATGAATATTTAGATGAAAATGATGCCACTAAAAGCTTTGATAGATCAAAGAAAAGGGCAACAAATATTCAGAACAAAGATCCTAATGTCCATAATTCTTCTATGCCGGAACATCCAGATCAATTCTTTGACAGTGAGCTCGATTTCGATGACAGTCATTATGAAATTCGTGACTTGGAGCTAAACAATAACCTGGATCATGGTAATGATGGAAGAGTGTTACCGTCATGGTCATGA

Protein sequence

MIYIWFSCYLPIDHRSCRYSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQFSSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSDIYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNVDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELNNNLDHGNDGRVLPSWS*

Homology

[Close]

BLAST of Cucsa.032980 vs. Swiss-Prot
Match: RQL4A_ARATH (ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 1.1e-202
Identity = 369/557 (66.25%), Postives = 426/557 (76.48%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSV+PKTKKC++DIDKFIKE+HFDECGI+YCLSRMDCEKV+ERLQE GHKAAFYHGSM+P
Sbjct: 650  YSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEP 709

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
             QR+FIQ QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 710  EQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 769

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYY Y DYIRVKHMISQG  +QSP+ +GYNR  + SSGR+LETNTENLLRMV YC
Sbjct: 770  RSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNR--VASSGRLLETNTENLLRMVRYC 829

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            EN+V+CRR LQLVH GEKFD  NCKKTCDNC  S +LI+KDVT I++QLV+LV+  G++F
Sbjct: 830  ENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCSSQSLIDKDVTLITRQLVELVKQTGERF 889

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSL+Q VKKHRHE L  HG GKHL K E SRILH+LV EDILVE+VRKSD
Sbjct: 890  SSAHILEVYRGSLNQMVKKHRHETLQFHGAGKHLSKIEVSRILHYLVTEDILVEDVRKSD 949

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKM--YP 378
            +YGSVSSLL+VN  K   L +G Q I ++FPSS K  K SK   T AKG L S K    P
Sbjct: 950  MYGSVSSLLQVNNAKATILFSGSQTIVMKFPSSVKVLKPSKQGATAAKGPLTSEKQSTLP 1009

Query: 379  NVDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRS 438
                 A P+   DV LSA +Y++LR LRT LVKEA DGVMAYHIF N+TLQQISRR+PR+
Sbjct: 1010 LTTEDAPPK---DVNLSANMYTALRKLRTALVKEAPDGVMAYHIFINSTLQQISRRIPRT 1069

Query: 439  KEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGS-NSNDSNDSGKRRRGGNKD 498
            KEELL+ING+GKAKVSKYGD++LETIE+T+ E+YG  K  S  SNDS DSGKRRR  N  
Sbjct: 1070 KEELLEINGLGKAKVSKYGDQLLETIETTVNEYYGTNKKDSIISNDSPDSGKRRRDENIS 1129

Query: 499  KDEYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDF-DDSHYEIRD 558
             +   D++         KK    ++NK   V +    +   +  + + DF D+   EIR 
Sbjct: 1130 PNVAEDDDFEVSPSQSCKK---TVRNKSNEVLHGECIDGDRRGMELDFDFKDEDGSEIRP 1187

Query: 559  LELNNNLDHGNDGRVLP 572
                       +GRVLP
Sbjct: 1190 -----------EGRVLP 1187

[Close]

BLAST of Cucsa.032980 vs. Swiss-Prot
Match: RQL4B_ARATH (ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 3.0e-184
Identity = 332/504 (65.87%), Postives = 392/504 (77.78%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSV+PKT KC++DIDKFI+E+HFDECGI+YCLSRMDCEKV E L+  GHKAAFYHGSMDP
Sbjct: 666  YSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDP 725

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
             +R+F+QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 726  GKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 785

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSY+DYIRVKHMISQG   Q  +  GYN     SSGR+LETNTENLLRMVSYC
Sbjct: 786  RSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCK--ASSGRMLETNTENLLRMVSYC 845

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            EN+VDCRR LQLVH GEKFD  NCK TCDNC  S  LI+KDVT I++QLV LV+  G++F
Sbjct: 846  ENEVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKILIDKDVTVIARQLVALVKLTGERF 905

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHI+E+YRGSL+Q VK++R + L LHG GKHL KSEASRILH+LV EDIL E V+KS+
Sbjct: 906  SSAHIVEIYRGSLNQSVKRNRQDTLHLHGAGKHLTKSEASRILHYLVTEDILAEGVKKSE 965

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            +YGSVSSLLKVN +K  SLL+GGQ I +RFPS+ K +K SK    PAK  L         
Sbjct: 966  LYGSVSSLLKVNRSKAASLLSGGQSITMRFPSTIKVSKQSKSTANPAKVPL------KQT 1025

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
              P    +  D  LS  L ++L+ LRT++VKE+ D VMAYHIFGNATL++IS+R+PR+KE
Sbjct: 1026 TLPMAKAAPQDSNLSGILLTALKNLRTDIVKESPDLVMAYHIFGNATLKEISKRLPRTKE 1085

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDING+GKAKVSKYGDR+LETI+STI + Y              SGKRRR  N + + 
Sbjct: 1086 ELLDINGLGKAKVSKYGDRLLETIDSTINDHY---------KTRPGSGKRRRDENVNPN- 1145

Query: 499  YLDENDATKSFDRSKKRATNIQNK 523
              +++D   S  +S K+   ++NK
Sbjct: 1146 VAEDDDPDWSASQSHKKV--VKNK 1149

[Close]

BLAST of Cucsa.032980 vs. Swiss-Prot
Match: HUS2_SCHPO (ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rqh1 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.6e-63
Identity = 135/383 (35.25%), Postives = 216/383 (56.40%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQ-ECGHKAAFYHGSMD 78
            Y + PK K    ++ +FI   H  E GI+YCLSR  CE+VA +L+ + G KA  YH  ++
Sbjct: 720  YEIKPK-KDLYTELYRFISNGHLHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLE 779

Query: 79   PAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 138
              +R  IQ +W      II AT+AFGMG++K DVRFVIHHS PKS+EGY+QE GRAGRDG
Sbjct: 780  KVERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDG 839

Query: 139  LRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSY 198
              + C+++YSY D++  + +I  G                       E   + L +++ +
Sbjct: 840  KPAHCIMFYSYKDHVTFQKLIMSG----------------DGDAETKERQRQMLRQVIQF 899

Query: 199  CENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQ 258
            CEN  DCRR   L +FGE FD  +C+K CD C +    I++D+T+ S Q + L++S+  +
Sbjct: 900  CENKTDCRRKQVLAYFGENFDKVHCRKGCDICCEEATYIKQDMTEFSLQAIKLLKSISGK 959

Query: 259  FSSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKS 318
             +   +++++RGS S  + ++  ++L   G GK L + ++ R+ HHLV E + VE+V ++
Sbjct: 960  ATLLQLMDIFRGSKSAKIVENGWDRLEGAGVGKLLNRGDSERLFHHLVSEGVFVEKV-EA 1019

Query: 319  DIYGSVSS-LLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYP 378
            +  G VS+ ++   +T + S+L G +RI L    S+     S   ++ +K +L + + Y 
Sbjct: 1020 NRRGFVSAYVVPGRQTIINSVLAGKRRIILDVKESSSKPDTSSRSLSRSK-TLPALREYQ 1079

Query: 379  NVDTPAQPQSEVDVQLSAELYSS 400
               T A     +  +   E+Y S
Sbjct: 1080 LKSTTASVDCSIGTREVDEIYDS 1083

[Close]

BLAST of Cucsa.032980 vs. Swiss-Prot
Match: SGS1_YEAST (ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGS1 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.6e-63
Identity = 135/343 (39.36%), Postives = 200/343 (58.31%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            Y V  KTK  + +I   +K    ++ GI+YC S+  CE+ + ++Q  G K A+YH  M+P
Sbjct: 877  YEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEP 936

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
             +R  +QK W  DEI +ICATVAFGMGI+KPDVRFV H ++P+++EGY+QE GRAGRDG 
Sbjct: 937  DERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGN 996

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
             S C+ Y+S+ D   ++ MI +               NL    +  E +   L ++++YC
Sbjct: 997  YSYCITYFSFRDIRTMQTMIQKD-------------KNLDRENK--EKHLNKLQQVMAYC 1056

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLI--EKDVTDISKQLVDLVRSM-G 258
            +N  DCRR L L +F E FD   C K CDNC  S N+I  E+DVT+ +K++V LV S+  
Sbjct: 1057 DNVTDCRRKLVLSYFNEDFDSKLCHKNCDNCRNSANVINEERDVTEPAKKIVKLVESIQN 1116

Query: 259  QQFSSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVR 318
            ++ +  +  +V++GS S  + +  H+ L  HG GK + KSE  RI  HL+   +L +E  
Sbjct: 1117 ERVTIIYCQDVFKGSRSSKIVQANHDTLEEHGIGKSMQKSEIERIFFHLITIRVL-QEYS 1176

Query: 319  KSDIYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLS 359
              +  G  SS +KV     + LL G   IK++F  S   ++ S
Sbjct: 1177 IMNNSGFASSYVKVG-PNAKKLLTGKMEIKMQFTISAPNSRPS 1202

[Close]

BLAST of Cucsa.032980 vs. Swiss-Prot
Match: BLM_MOUSE (Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.5e-61
Identity = 167/530 (31.51%), Postives = 263/530 (49.62%), Query Frame = 1


Query: 10   LPIDHRSCRYSVIPKT-KKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHK 69
            +  +  + +Y V+PK  KK   D  ++I++ H  + GI+YCLSR +C+ +A+ LQ  G  
Sbjct: 863  MSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREGLA 922

Query: 70   AAFYHGSMDPAQRSFIQKQW-SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYH 129
            A  YH  +  + R  +Q +W ++D   +ICAT+AFGMGI+KPDVRFVIH SLPKS+EGY+
Sbjct: 923  ALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYY 982

Query: 130  QECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETN 189
            QE GRAGRDG  S CVL+Y+Y D  R+K +I            G   T         ET+
Sbjct: 983  QESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK-------DGNYHTK--------ETH 1042

Query: 190  TENLLRMVSYCENDVDCRRLLQLVHFGEK-FDPGNCKK----TCDNCLKSTNLIEKDVTD 249
              NL  MV YCEN  +CRR+  L +FGEK F+P  CKK    +CDNC K+ +   KDVTD
Sbjct: 1043 VNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNCCKTKDYKTKDVTD 1102

Query: 250  ISKQLVDLVRSMGQQFSSAHILEVYRGSLSQFV-----KKHRHEKLSLHGTGKHLLKSEA 309
              K ++  V+       + +I    R +L+  V      K    K  + G G    +  A
Sbjct: 1103 DVKNIIRFVQEHSSSPGTRNIGPAGRFTLNMLVDIFLGSKSAKVKSGIFGKGTTYSRHNA 1162

Query: 310  SRILHHLVIEDILVEEVRKSDIYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKL 369
             R+   L+++ IL E++  +     ++ ++    TK  S+L+G   +K+ F  +  ++ +
Sbjct: 1163 ERLFKKLILDKILDEDLYINANDQPIAYVML--GTKAHSVLSG--HLKVDFMETENSSSI 1222

Query: 370  SKFEMTPAKGSLVSGKMYPNVDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMA 429
             K +   AK S                + EV  +   EL    ++L          GV  
Sbjct: 1223 KKQKALVAKVS---------------QREEVVKKCLGELTEVCKLL------GKVFGVHY 1282

Query: 430  YHIFGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGS 489
            ++IF  ATL++++  +    E LL I+G+ + K+ KYG  ++  ++          K   
Sbjct: 1283 FNIFNTATLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPVLQ----------KYSE 1342

Query: 490  NSNDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQNKDPNVH 528
             +  + D     RG  +D +E  +E   +  +  ++ R    + K    H
Sbjct: 1343 WTVPAEDGSPGARGAPEDTEEEEEEAPVSSHYFANQTRNERKRKKMSATH 1342

[Close]

BLAST of Cucsa.032980 vs. TrEMBL
Match: A0A0A0L762_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1)

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 554/556 (99.64%), Postives = 556/556 (100.00%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKCVDDIDKFIKE+HFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 634  YSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 693

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
Sbjct: 694  AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 753

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC
Sbjct: 754  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 813

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF
Sbjct: 814  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 873

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD
Sbjct: 874  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 933

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPN+
Sbjct: 934  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNI 993

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
            DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE
Sbjct: 994  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 1053

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE
Sbjct: 1054 ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 1113

Query: 499  YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 558
            YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN
Sbjct: 1114 YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 1173

Query: 559  NNLDHGNDGRVLPSWS 575
            NNLDHGNDGRVLPSWS
Sbjct: 1174 NNLDHGNDGRVLPSWS 1189

[Close]

BLAST of Cucsa.032980 vs. TrEMBL
Match: A0A061E184_THECC (DNA helicase isoform 1 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 1.0e-239
Identity = 420/558 (75.27%), Postives = 472/558 (84.59%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKCVDDIDKFIKE+HFDECGI+YCLSRMDCEKVAE+LQECGHKAAFYHG+MDP
Sbjct: 694  YSVIPKTKKCVDDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGNMDP 753

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQR+ IQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 754  AQRAAIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 813

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSC+LYYSYSDYIRVKHMISQGA EQSP VSGY+R N  +SGRILETNTENLLRMVSYC
Sbjct: 814  RSSCLLYYSYSDYIRVKHMISQGAAEQSPFVSGYSRFN--NSGRILETNTENLLRMVSYC 873

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQL+HFGEKFD GNCKKTCDNC +    ++KDVT+I+KQLV+LV+  GQQF
Sbjct: 874  ENDVDCRRLLQLLHFGEKFDSGNCKKTCDNCCRVKGFVDKDVTNIAKQLVELVKLTGQQF 933

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SS+HILEVYRGSLSQFVKKHRHE LSLHG GKH+ K EASRIL HLVIE+ LVE+V+KSD
Sbjct: 934  SSSHILEVYRGSLSQFVKKHRHETLSLHGAGKHVAKGEASRILRHLVIEEFLVEDVKKSD 993

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMY-PN 378
            IYGSVSS+LKVNE+KV++L  GGQ I LRFPS+ K  KLSK E+TPAKGSL SGK+  P 
Sbjct: 994  IYGSVSSVLKVNESKVQNLCVGGQTIILRFPSTVKATKLSKSEVTPAKGSLTSGKLSPPR 1053

Query: 379  VDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSK 438
            VDTPAQ QS+VD+ LSA+LYS+LRMLRT LVKEA DGVMAYHIFGNATLQ IS+RVPR++
Sbjct: 1054 VDTPAQSQSKVDLNLSAKLYSALRMLRTVLVKEAGDGVMAYHIFGNATLQHISKRVPRTE 1113

Query: 439  EELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKD 498
            EELL+INGIGKAK+SKYGDRILETIE TIKE Y   +N S+SNDSNDS KRRR  N    
Sbjct: 1114 EELLEINGIGKAKISKYGDRILETIEVTIKEHYKTDRNSSSSNDSNDSTKRRRDANGAPK 1173

Query: 499  EYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDD-SHYEIRDLE 558
              +D++D T+S  RSKKR   +QN D   H+S  P++ +Q   ++LDFDD   Y +    
Sbjct: 1174 ANVDDDDFTRSTSRSKKRTVKMQNNDGGAHSSKDPDYNNQCTGNDLDFDDYDDYGVESKC 1233

Query: 559  LNNNLDHGNDGRVLPSWS 575
                +     GRVLPSWS
Sbjct: 1234 PEMKVHVDGTGRVLPSWS 1249

[Close]

BLAST of Cucsa.032980 vs. TrEMBL
Match: V4SBW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000077mg PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 1.1e-236
Identity = 414/558 (74.19%), Postives = 472/558 (84.59%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            +SVIPKTKKC+DDIDKFIKE+HFDECGI+YCLSRMDCEKVAERLQECGHKAAFYHGS+DP
Sbjct: 590  FSVIPKTKKCLDDIDKFIKENHFDECGIIYCLSRMDCEKVAERLQECGHKAAFYHGSIDP 649

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQR+F+QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 650  AQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 709

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSD+IRVKHMISQG  EQSP   G+NR N+ +SGR+LETNTENLLRMVSYC
Sbjct: 710  RSSCVLYYSYSDFIRVKHMISQGVAEQSPFTPGHNRFNVANSGRVLETNTENLLRMVSYC 769

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFD  +CKKTCDNC K  + IEKDVTD +K+LV+LV+  GQQF
Sbjct: 770  ENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCSKIKSFIEKDVTDTAKKLVELVKLTGQQF 829

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SS+HILEV+RGSL+QFVKKHRHE LSLHG GKHL KSEASRIL HLVIED L+EEV+KSD
Sbjct: 830  SSSHILEVFRGSLNQFVKKHRHETLSLHGAGKHLAKSEASRILRHLVIEDFLMEEVKKSD 889

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPN- 378
            +YGSVSS+LKVN++K  +L+ G Q + LRFPS+  + KLSK ++TPAKGSL+SGK+ P+ 
Sbjct: 890  VYGSVSSVLKVNQSKAHNLIIGRQNVVLRFPSAINSTKLSKSDVTPAKGSLMSGKLSPSR 949

Query: 379  VDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSK 438
             DTP+QPQ+EVD+ LSA+LYSSLRMLRT LVKEA +GVMAYHIFGNATLQ +S+RVPR++
Sbjct: 950  NDTPSQPQNEVDLNLSAKLYSSLRMLRTLLVKEAGEGVMAYHIFGNATLQHLSKRVPRTE 1009

Query: 439  EELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKD 498
            EELL+INGIGKAKVSKYG R+LETIESTIKEFY   KNGS+SNDSNDSGKRRR  N+  +
Sbjct: 1010 EELLEINGIGKAKVSKYGVRLLETIESTIKEFYKTDKNGSSSNDSNDSGKRRRDENEAPN 1069

Query: 499  EYL-DENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLE 558
                D++D TKS  RSKKRA+  QNK   V N + P+  +   D  LDFD+  Y      
Sbjct: 1070 SNKGDDDDFTKSTARSKKRASKSQNKTVEVINHNEPDSYECVDD--LDFDEYEYVYEMNG 1129

Query: 559  LNNNLDHGNDGRVLPSWS 575
                 D  N GRVLP WS
Sbjct: 1130 STTKPDQNNGGRVLPRWS 1145

[Close]

BLAST of Cucsa.032980 vs. TrEMBL
Match: F6HK69_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00400 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 2.9e-234
Identity = 404/557 (72.53%), Postives = 469/557 (84.20%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSV+PKT+KC+DDIDKFI+E+HFDECGI+YCLSR+DCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 555  YSVLPKTRKCLDDIDKFIRENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDP 614

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            A+R+F+QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 615  ARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 674

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMI+QG  EQSPL SG NR+N+ SSGRILETNTENLLRMVSYC
Sbjct: 675  RSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVSYC 734

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFD  +CKKTCDNCLK  + +EKDVT+I+KQLV+LV+   +QF
Sbjct: 735  ENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCLKIKSFVEKDVTEIAKQLVELVKLTREQF 794

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SS+HILEVYRGSLSQ+VKKHRHE L LH  GKHL K EASRIL HLV ED L+E+V+KSD
Sbjct: 795  SSSHILEVYRGSLSQYVKKHRHETLGLHAAGKHLAKGEASRILRHLVTEDFLMEDVKKSD 854

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMY-PN 378
            IYGSVSS+LKVNE+KV  L +GGQ+I LRFPSS K++KLS FE TPAKGSL SGK+  P 
Sbjct: 855  IYGSVSSVLKVNESKVYKLFSGGQKIILRFPSSAKSSKLSNFEATPAKGSLTSGKLSPPR 914

Query: 379  VDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSK 438
            ++TPA    EVD+ LSA+LYS+LR+LRT LVKEA +GVMAYHIFGNATLQQIS+R+PR+K
Sbjct: 915  IETPAH-LPEVDLNLSAKLYSALRILRTVLVKEAGEGVMAYHIFGNATLQQISKRIPRTK 974

Query: 439  EELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKD 498
            EELL++NGIGKAK+SKYGDR+LETIESTIKE+Y   KN S+SNDS D+ KRRR   K  D
Sbjct: 975  EELLEVNGIGKAKISKYGDRVLETIESTIKEYYKTDKNSSSSNDSTDTIKRRRESAKVLD 1034

Query: 499  EYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLEL 558
               +++D TKS DRS+ RA    NK    +N+   ++ +Q  D +LDFDD++ ++     
Sbjct: 1035 ANPEDDDFTKSTDRSRGRAMKRHNKGGEANNTRETDYYNQCIDDDLDFDDANCDVAINGS 1094

Query: 559  NNNLDHGNDGRVLPSWS 575
               +D     R LPSWS
Sbjct: 1095 APKVDRDGARRTLPSWS 1110

[Close]

BLAST of Cucsa.032980 vs. TrEMBL
Match: A0A067KV41_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04990 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 1.1e-230
Identity = 409/592 (69.09%), Postives = 471/592 (79.56%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKC+DDIDKFIKE+HFDECGI+YCLSRMDCEKVAE+LQECGHKAAFYHG+MD 
Sbjct: 650  YSVIPKTKKCLDDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGNMDA 709

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQR+F+QKQWSKDE+NIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 710  AQRAFVQKQWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 769

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMI QG  EQSP    YNR+N+ +S R+LE NTENLLRMVSYC
Sbjct: 770  RSSCVLYYSYSDYIRVKHMIIQGQMEQSPWTPAYNRSNMTNSERVLEKNTENLLRMVSYC 829

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQL+HFGEKFD GNCKKTCDNC  +  L+EKDVT+ +KQLV+LV+  GQQF
Sbjct: 830  ENDVDCRRLLQLLHFGEKFDSGNCKKTCDNCSTTKTLVEKDVTENAKQLVELVKLTGQQF 889

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SS+HILEVYRGSL+Q+VK++RHEKL+LHG GKHL KSEASRIL HLV +D LVE+V+KSD
Sbjct: 890  SSSHILEVYRGSLNQYVKRYRHEKLNLHGAGKHLAKSEASRILRHLVTDDFLVEDVKKSD 949

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKL------------------------RFPSSTKT 378
            IYGSVSS+LKVNE+K  SL +G Q I L                        RFPS+ K 
Sbjct: 950  IYGSVSSVLKVNESKAYSLCSGRQTIILRRDILFAYLIYTIMTLALTAQVLCRFPSAVKP 1009

Query: 379  NKLSKFEMTPAKGSLVSGKMY-PNVDTPAQPQS-----------EVDVQLSAELYSSLRM 438
            +K SKF +TPAKG LVSGK   P VDTPAQPQS           E D+ LSA+LYS+LRM
Sbjct: 1010 SKQSKFSVTPAKGLLVSGKQSPPRVDTPAQPQSEGDFAPAQPQPEGDLNLSAKLYSALRM 1069

Query: 439  LRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETI 498
            LRT LVKEA +GVMAYHIFGNATLQ +S+R+PR+KEELL+INGIGK KVS+YGDR+LETI
Sbjct: 1070 LRTILVKEAGEGVMAYHIFGNATLQHLSKRIPRTKEELLEINGIGKVKVSRYGDRLLETI 1129

Query: 499  ESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQNK 558
            ESTIKE+Y   +N S+SNDSNDS KRRR  N + + +++++D TKS  RSK+RA   QNK
Sbjct: 1130 ESTIKEYYKTDRNSSSSNDSNDSMKRRRNENANPNGFVEDDDYTKSTGRSKRRAAKFQNK 1189

Query: 559  DPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELNNNLDHGNDGRVLPSWS 575
            DP+VHNSS  ++     D +LDF D  Y+     L    +    GRVLPSWS
Sbjct: 1190 DPDVHNSSKTDY--NCLDDDLDFQDLCYDQDINSLEIEAEKNCTGRVLPSWS 1239

[Close]

BLAST of Cucsa.032980 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 707.6 bits (1825), Expect = 6.3e-204
Identity = 369/557 (66.25%), Postives = 426/557 (76.48%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSV+PKTKKC++DIDKFIKE+HFDECGI+YCLSRMDCEKV+ERLQE GHKAAFYHGSM+P
Sbjct: 650  YSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEP 709

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
             QR+FIQ QWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 710  EQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 769

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYY Y DYIRVKHMISQG  +QSP+ +GYNR  + SSGR+LETNTENLLRMV YC
Sbjct: 770  RSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNR--VASSGRLLETNTENLLRMVRYC 829

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            EN+V+CRR LQLVH GEKFD  NCKKTCDNC  S +LI+KDVT I++QLV+LV+  G++F
Sbjct: 830  ENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCSSQSLIDKDVTLITRQLVELVKQTGERF 889

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSL+Q VKKHRHE L  HG GKHL K E SRILH+LV EDILVE+VRKSD
Sbjct: 890  SSAHILEVYRGSLNQMVKKHRHETLQFHGAGKHLSKIEVSRILHYLVTEDILVEDVRKSD 949

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKM--YP 378
            +YGSVSSLL+VN  K   L +G Q I ++FPSS K  K SK   T AKG L S K    P
Sbjct: 950  MYGSVSSLLQVNNAKATILFSGSQTIVMKFPSSVKVLKPSKQGATAAKGPLTSEKQSTLP 1009

Query: 379  NVDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRS 438
                 A P+   DV LSA +Y++LR LRT LVKEA DGVMAYHIF N+TLQQISRR+PR+
Sbjct: 1010 LTTEDAPPK---DVNLSANMYTALRKLRTALVKEAPDGVMAYHIFINSTLQQISRRIPRT 1069

Query: 439  KEELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGS-NSNDSNDSGKRRRGGNKD 498
            KEELL+ING+GKAKVSKYGD++LETIE+T+ E+YG  K  S  SNDS DSGKRRR  N  
Sbjct: 1070 KEELLEINGLGKAKVSKYGDQLLETIETTVNEYYGTNKKDSIISNDSPDSGKRRRDENIS 1129

Query: 499  KDEYLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDF-DDSHYEIRD 558
             +   D++         KK    ++NK   V +    +   +  + + DF D+   EIR 
Sbjct: 1130 PNVAEDDDFEVSPSQSCKK---TVRNKSNEVLHGECIDGDRRGMELDFDFKDEDGSEIRP 1187

Query: 559  LELNNNLDHGNDGRVLP 572
                       +GRVLP
Sbjct: 1190 -----------EGRVLP 1187

[Close]

BLAST of Cucsa.032980 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 646.4 bits (1666), Expect = 1.7e-185
Identity = 332/504 (65.87%), Postives = 392/504 (77.78%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSV+PKT KC++DIDKFI+E+HFDECGI+YCLSRMDCEKV E L+  GHKAAFYHGSMDP
Sbjct: 666  YSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDP 725

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
             +R+F+QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDG 
Sbjct: 726  GKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 785

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSY+DYIRVKHMISQG   Q  +  GYN     SSGR+LETNTENLLRMVSYC
Sbjct: 786  RSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCK--ASSGRMLETNTENLLRMVSYC 845

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            EN+VDCRR LQLVH GEKFD  NCK TCDNC  S  LI+KDVT I++QLV LV+  G++F
Sbjct: 846  ENEVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKILIDKDVTVIARQLVALVKLTGERF 905

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHI+E+YRGSL+Q VK++R + L LHG GKHL KSEASRILH+LV EDIL E V+KS+
Sbjct: 906  SSAHIVEIYRGSLNQSVKRNRQDTLHLHGAGKHLTKSEASRILHYLVTEDILAEGVKKSE 965

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            +YGSVSSLLKVN +K  SLL+GGQ I +RFPS+ K +K SK    PAK  L         
Sbjct: 966  LYGSVSSLLKVNRSKAASLLSGGQSITMRFPSTIKVSKQSKSTANPAKVPL------KQT 1025

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
              P    +  D  LS  L ++L+ LRT++VKE+ D VMAYHIFGNATL++IS+R+PR+KE
Sbjct: 1026 TLPMAKAAPQDSNLSGILLTALKNLRTDIVKESPDLVMAYHIFGNATLKEISKRLPRTKE 1085

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDING+GKAKVSKYGDR+LETI+STI + Y              SGKRRR  N + + 
Sbjct: 1086 ELLDINGLGKAKVSKYGDRLLETIDSTINDHY---------KTRPGSGKRRRDENVNPN- 1145

Query: 499  YLDENDATKSFDRSKKRATNIQNK 523
              +++D   S  +S K+   ++NK
Sbjct: 1146 VAEDDDPDWSASQSHKKV--VKNK 1149

[Close]

BLAST of Cucsa.032980 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 205.7 bits (522), Expect = 7.7e-53
Identity = 152/451 (33.70%), Postives = 220/451 (48.78%), Query Frame = 1


Query: 19  YSVIPKT---KKCVDDIDKFIKESHFD-ECGIVYCLSRMDCEKVAERLQECGHKAAFYHG 78
           YSV  K+   K  VD+I +FI+ES+ + E GIVYC SR +CE++A  L+E G  A +YH 
Sbjct: 286 YSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHA 345

Query: 79  SMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAG 138
            MD   R  +  +WSK+++ +I  TVAFGMGINKPDVRFVIHHSL KS+E Y+QE GRAG
Sbjct: 346 DMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAG 405

Query: 139 RDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRM 198
           RDGL S C+L++  +D  R   M+             Y  + L           +NL  +
Sbjct: 406 RDGLPSECILFFRSADVPRQSSMVF------------YEYSGL-----------QNLYDI 465

Query: 199 VSYCENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSM 258
           V YC++   CRR     HFGE     +C   CDNC  S+ + E DV+D+SK +V +V+  
Sbjct: 466 VRYCQSKTKCRRSAFFRHFGEPSQ--DCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQET 525

Query: 259 GQQFSSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEV 318
             +     +L++                             +  R  H  +I ++  +EV
Sbjct: 526 QAKDQRVTMLQL----------------------------GDKLRNKHKDLIAELKRDEV 585

Query: 319 RKSDIYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKM 378
               I   V S+LK                    P ST     +   M P    L+ G+ 
Sbjct: 586 EHLVIKLIVDSVLKEEFQHT--------------PYSTN----AYVTMGPLANQLLQGRK 645

Query: 379 YPNVDTPAQPQSEVDVQLSAELYSSLRMLRTNLVKE--AADG-VMAYHIFGNATLQQISR 438
              ++T ++   ++   ++   +S L +    L KE  AADG ++ + +     +  IS 
Sbjct: 646 TIKMETSSRQTKKLKRSIT---FSGLELKLDELRKEISAADGSILPHTVLSTQQIGSISS 660

Query: 439 RVPRSKEELLDINGIGKAKVSKYGDRILETI 463
           + P S +EL  I  IGK K  KYGDRILE +
Sbjct: 706 QKPVSLQELESI--IGKLKTEKYGDRILEEV 660

[Close]

BLAST of Cucsa.032980 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 174.1 bits (440), Expect = 2.5e-43
Identity = 91/227 (40.09%), Postives = 131/227 (57.71%), Query Frame = 1


Query: 10  LPIDHRSCRYSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQE-CGHK 69
           +  D  + +Y VI KTK+ +  + + +++   D+ GIVYCLS+ +C  VA+ L E C  K
Sbjct: 395 MSFDRINLKYEVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVK 454

Query: 70  AAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 129
             +YH  +   QR  +Q++W   E+ I+CAT+AFGMGI+K DVRFVIH++L K++E Y+Q
Sbjct: 455 TVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQ 514

Query: 130 ECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNT 189
           E GRAGRDGL++ C+  Y   D+ RV  M+  G         G N     S+        
Sbjct: 515 ESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNG--------QGRNMDRFKSA-------M 574

Query: 190 ENLLRMVSYCENDVDCRRLLQLVHFGEKFDPGNCKKT---CDNCLKS 233
               +M  YCE   +CRR + L +FGE FD   CK +   CDNC +S
Sbjct: 575 AQAKKMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNPCDNCERS 606

[Close]

BLAST of Cucsa.032980 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-32
Identity = 79/220 (35.91%), Postives = 117/220 (53.18%), Query Frame = 1


Query: 44  CGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFG 103
           C I+YCL R  C+ ++  L   G  +A YH  ++   RS +   W   +  II ATVAFG
Sbjct: 258 CAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFG 317

Query: 104 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGAT 163
           MGI+K DVR V H ++PKS+E ++QE GRAGRD L S  VLYY   D  ++++++     
Sbjct: 318 MGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSEN 377

Query: 164 EQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDPGNCK 223
           ++S            SS +     T +  ++V+YCE    CRR   L  FGE+F    CK
Sbjct: 378 KKS------------SSSK---KPTSDFEQIVTYCEGS-GCRRKKILESFGEEFPVQQCK 437

Query: 224 KTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQFSSAHI 264
           KTCD C        K    ++  L +L+ +  ++ +S+ I
Sbjct: 438 KTCDAC--------KHPNQVAHCLEELMTTASRRHNSSRI 453

[Close]

BLAST of Cucsa.032980 vs. NCBI nr
Match: gi|778680266|ref|XP_011651280.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus])

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 554/556 (99.64%), Postives = 556/556 (100.00%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKCVDDIDKFIKE+HFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 654  YSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 713

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
Sbjct: 714  AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 773

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC
Sbjct: 774  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 833

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF
Sbjct: 834  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 893

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD
Sbjct: 894  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 953

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPN+
Sbjct: 954  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNI 1013

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
            DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE
Sbjct: 1014 DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 1073

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE
Sbjct: 1074 ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 1133

Query: 499  YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 558
            YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN
Sbjct: 1134 YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 1193

Query: 559  NNLDHGNDGRVLPSWS 575
            NNLDHGNDGRVLPSWS
Sbjct: 1194 NNLDHGNDGRVLPSWS 1209

[Close]

BLAST of Cucsa.032980 vs. NCBI nr
Match: gi|700202460|gb|KGN57593.1| (hypothetical protein Csa_3G221760 [Cucumis sativus])

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 554/556 (99.64%), Postives = 556/556 (100.00%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKCVDDIDKFIKE+HFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 634  YSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 693

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
Sbjct: 694  AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 753

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC
Sbjct: 754  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 813

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF
Sbjct: 814  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 873

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD
Sbjct: 874  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 933

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPN+
Sbjct: 934  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNI 993

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
            DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE
Sbjct: 994  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 1053

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE
Sbjct: 1054 ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 1113

Query: 499  YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 558
            YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN
Sbjct: 1114 YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 1173

Query: 559  NNLDHGNDGRVLPSWS 575
            NNLDHGNDGRVLPSWS
Sbjct: 1174 NNLDHGNDGRVLPSWS 1189

[Close]

BLAST of Cucsa.032980 vs. NCBI nr
Match: gi|659112088|ref|XP_008456060.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 537/556 (96.58%), Postives = 547/556 (98.38%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKCVDDIDKFIKE+HFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 621  YSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 680

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
Sbjct: 681  AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 740

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC
Sbjct: 741  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 800

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKS NLIEKDVTDI+KQLVDLVRSMGQQF
Sbjct: 801  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSMNLIEKDVTDIAKQLVDLVRSMGQQF 860

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSLSQFVKKHRHEKLSLHG GKHLLKS+ASRILH+LVIEDILVEEV+K+D
Sbjct: 861  SSAHILEVYRGSLSQFVKKHRHEKLSLHGAGKHLLKSDASRILHYLVIEDILVEEVKKND 920

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            IYGSVSSLLKVNETKV+SLLNGGQRI LRFPS TKTNKLSKFEMTPAKGSLV GKMYPN+
Sbjct: 921  IYGSVSSLLKVNETKVQSLLNGGQRITLRFPSITKTNKLSKFEMTPAKGSLVFGKMYPNI 980

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
            DTPAQPQSEVDVQLSA+LYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE
Sbjct: 981  DTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 1040

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDINGIGKAKVSKYGDRILETIESTI EFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE
Sbjct: 1041 ELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 1100

Query: 499  YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 558
            YLDENDATKSFDRSKKRATNIQ+ DP VHNSS PEHPDQFFDSELDFDDSHYEIRDLELN
Sbjct: 1101 YLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDSELDFDDSHYEIRDLELN 1160

Query: 559  NNLDHGNDGRVLPSWS 575
            NNLDHGNDGRVLPSWS
Sbjct: 1161 NNLDHGNDGRVLPSWS 1176

[Close]

BLAST of Cucsa.032980 vs. NCBI nr
Match: gi|659112092|ref|XP_008456062.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X5 [Cucumis melo])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 537/556 (96.58%), Postives = 547/556 (98.38%), Query Frame = 1


Query: 19  YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
           YSVIPKTKKCVDDIDKFIKE+HFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 289 YSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 348

Query: 79  AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
           AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
Sbjct: 349 AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 408

Query: 139 RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
           RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC
Sbjct: 409 RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 468

Query: 199 ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
           ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKS NLIEKDVTDI+KQLVDLVRSMGQQF
Sbjct: 469 ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSMNLIEKDVTDIAKQLVDLVRSMGQQF 528

Query: 259 SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
           SSAHILEVYRGSLSQFVKKHRHEKLSLHG GKHLLKS+ASRILH+LVIEDILVEEV+K+D
Sbjct: 529 SSAHILEVYRGSLSQFVKKHRHEKLSLHGAGKHLLKSDASRILHYLVIEDILVEEVKKND 588

Query: 319 IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
           IYGSVSSLLKVNETKV+SLLNGGQRI LRFPS TKTNKLSKFEMTPAKGSLV GKMYPN+
Sbjct: 589 IYGSVSSLLKVNETKVQSLLNGGQRITLRFPSITKTNKLSKFEMTPAKGSLVFGKMYPNI 648

Query: 379 DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
           DTPAQPQSEVDVQLSA+LYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE
Sbjct: 649 DTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 708

Query: 439 ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
           ELLDINGIGKAKVSKYGDRILETIESTI EFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE
Sbjct: 709 ELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 768

Query: 499 YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 558
           YLDENDATKSFDRSKKRATNIQ+ DP VHNSS PEHPDQFFDSELDFDDSHYEIRDLELN
Sbjct: 769 YLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDSELDFDDSHYEIRDLELN 828

Query: 559 NNLDHGNDGRVLPSWS 575
           NNLDHGNDGRVLPSWS
Sbjct: 829 NNLDHGNDGRVLPSWS 844

[Close]

BLAST of Cucsa.032980 vs. NCBI nr
Match: gi|659112082|ref|XP_008456057.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis melo])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 537/556 (96.58%), Postives = 547/556 (98.38%), Query Frame = 1


Query: 19   YSVIPKTKKCVDDIDKFIKESHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 78
            YSVIPKTKKCVDDIDKFIKE+HFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP
Sbjct: 654  YSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDP 713

Query: 79   AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 138
            AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL
Sbjct: 714  AQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGL 773

Query: 139  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 198
            RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC
Sbjct: 774  RSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYC 833

Query: 199  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLVDLVRSMGQQF 258
            ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKS NLIEKDVTDI+KQLVDLVRSMGQQF
Sbjct: 834  ENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSMNLIEKDVTDIAKQLVDLVRSMGQQF 893

Query: 259  SSAHILEVYRGSLSQFVKKHRHEKLSLHGTGKHLLKSEASRILHHLVIEDILVEEVRKSD 318
            SSAHILEVYRGSLSQFVKKHRHEKLSLHG GKHLLKS+ASRILH+LVIEDILVEEV+K+D
Sbjct: 894  SSAHILEVYRGSLSQFVKKHRHEKLSLHGAGKHLLKSDASRILHYLVIEDILVEEVKKND 953

Query: 319  IYGSVSSLLKVNETKVRSLLNGGQRIKLRFPSSTKTNKLSKFEMTPAKGSLVSGKMYPNV 378
            IYGSVSSLLKVNETKV+SLLNGGQRI LRFPS TKTNKLSKFEMTPAKGSLV GKMYPN+
Sbjct: 954  IYGSVSSLLKVNETKVQSLLNGGQRITLRFPSITKTNKLSKFEMTPAKGSLVFGKMYPNI 1013

Query: 379  DTPAQPQSEVDVQLSAELYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 438
            DTPAQPQSEVDVQLSA+LYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE
Sbjct: 1014 DTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKE 1073

Query: 439  ELLDINGIGKAKVSKYGDRILETIESTIKEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 498
            ELLDINGIGKAKVSKYGDRILETIESTI EFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE
Sbjct: 1074 ELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDE 1133

Query: 499  YLDENDATKSFDRSKKRATNIQNKDPNVHNSSMPEHPDQFFDSELDFDDSHYEIRDLELN 558
            YLDENDATKSFDRSKKRATNIQ+ DP VHNSS PEHPDQFFDSELDFDDSHYEIRDLELN
Sbjct: 1134 YLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDSELDFDDSHYEIRDLELN 1193

Query: 559  NNLDHGNDGRVLPSWS 575
            NNLDHGNDGRVLPSWS
Sbjct: 1194 NNLDHGNDGRVLPSWS 1209

The following BLAST results are available for this feature:

BLAST of Cucsa.032980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RQL4A_ARATH	1.1e-202	66.25	ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=...	[more]
RQL4B_ARATH	3.0e-184	65.87	ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=...	[more]
HUS2_SCHPO	4.6e-63	35.25	ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ...	[more]
SGS1_YEAST	4.6e-63	39.36	ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]
BLM_MOUSE	1.5e-61	31.51	Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1	[more]

BLAST of Cucsa.032980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L762_CUCSA	0.0e+00	99.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1	[more]
A0A061E184_THECC	1.0e-239	75.27	DNA helicase isoform 1 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1	[more]
V4SBW7_9ROSI	1.1e-236	74.19	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000077mg PE=4 SV=1	[more]
F6HK69_VITVI	2.9e-234	72.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00400 PE=4 SV=...	[more]
A0A067KV41_JATCU	1.1e-230	69.09	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04990 PE=4 SV=1	[more]

BLAST of Cucsa.032980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10930.1	6.3e-204	66.25	DNA helicase (RECQl4A)	[more]
AT1G60930.1	1.7e-185	65.87	RECQ helicase L4B	[more]
AT1G31360.1	7.7e-53	33.70	RECQ helicase L2	[more]
AT3G05740.1	2.5e-43	40.09	RECQ helicase l1	[more]
AT4G35740.1	2.0e-32	35.91	DEAD/DEAH box RNA helicase family protein	[more]

BLAST of Cucsa.032980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680266\|ref\|XP_011651280.1\|	0.0e+00	99.64	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus]	[more]
gi\|700202460\|gb\|KGN57593.1\|	0.0e+00	99.64	hypothetical protein Csa_3G221760 [Cucumis sativus]	[more]
gi\|659112088\|ref\|XP_008456060.1\|	0.0e+00	96.58	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo]	[more]
gi\|659112092\|ref\|XP_008456062.1\|	0.0e+00	96.58	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X5 [Cucumis melo]	[more]
gi\|659112082\|ref\|XP_008456057.1\|	0.0e+00	96.58	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR002121	HRDC_dom
IPR004589	DNA_helicase_ATP-dep_RecQ
IPR010997	HRDC-like_sf
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR018982	RQC_domain
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008026	ATP-dependent helicase activity
GO:0000166	nucleotide binding
GO:0003824	catalytic activity
GO:0043140	ATP-dependent 3'-5' DNA helicase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006310	DNA recombination
GO:0044237	cellular metabolic process
GO:0006260	DNA replication
GO:0006281	DNA repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0043140	ATP-dependent 3'-5' DNA helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.032980.1	Cucsa.032980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 30..137 score: 2.5
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 56..137 score: 3.1
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 31..176 score: 19
IPR002121	HRDC domain	GENE3D	G3DSA:1.10.150.80		coord: 394..468 score: 2.2
IPR002121	HRDC domain	PFAM	PF00570	HRDC	coord: 394..462 score: 1.2
IPR002121	HRDC domain	SMART	SM00341	hrdc7	coord: 390..472 score: 0.
IPR002121	HRDC domain	PROFILE	PS50967	HRDC	coord: 390..472 score: 18
IPR004589	DNA helicase, ATP-dependent, RecQ type	TIGRFAMs	TIGR00614	TIGR00614	coord: 13..290 score: 1.2
IPR010997	HRDC-like	unknown	SSF47819	HRDC-like	coord: 393..465 score: 2.14
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 150..354 score: 3.5
IPR018982	RQC domain	PFAM	PF09382	RQC	coord: 237..353 score: 9.1
IPR018982	RQC domain	SMART	SM00956	RQC_2	coord: 239..350 score: 7.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 12..149 score: 4.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 18..280 score: 3.68
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 18..164 score: 3.5E-282coord: 184..521 score: 3.5E
None	No IPR available	PANTHER	PTHR13710:SF94	ATP-DEPENDENT DNA HELICASE RECQ FAMILY PROTEIN	coord: 18..164 score: 3.5E-282coord: 184..521 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.032980	MELO3C019444	Melon (DHL92) v3.5.1	cgymeB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.032980	Cucurbita maxima (Rimu)	cgycmaB0007
Cucsa.032980	Cucurbita maxima (Rimu)	cgycmaB0012
Cucsa.032980	Cucurbita moschata (Rifu)	cgycmoB0006
Cucsa.032980	Cucurbita moschata (Rifu)	cgycmoB0012
Cucsa.032980	Wild cucumber (PI 183967)	cgycpiB003
Cucsa.032980	Cucumber (Chinese Long) v2	cgycuB003
Cucsa.032980	Watermelon (Charleston Gray)	cgywcgB003
Cucsa.032980	Watermelon (97103) v1	cgywmB002
Cucsa.032980	Cucurbita pepo (Zucchini)	cgycpeB0005
Cucsa.032980	Cucurbita pepo (Zucchini)	cgycpeB0007
Cucsa.032980	Bottle gourd (USVL1VR-Ls)	cgylsiB003
Cucsa.032980	Melon (DHL92) v3.6.1	cgymedB002
Cucsa.032980	Silver-seed gourd	carcgyB0048
Cucsa.032980	Silver-seed gourd	carcgyB0730
Cucsa.032980	Cucumber (Chinese Long) v3	cgycucB006
Cucsa.032980	Watermelon (97103) v2	cgywmbB003
Cucsa.032980	Wax gourd	cgywgoB003