Cucsa.031830 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.031830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	UPF0420 protein C16orf58 like
Location	scaffold00429 : 1050929 .. 1051577 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACCGAGTCTATTTGGGAAGTAAAAGGAGGTAAGCGAATCCGCCTCATTCTCGATACGTATAGAGATGAGTTCCATGTTGCAACTGGCATGCCGTCGTCTTCGTTATCCTTTTCCTTTGTCAACGTTTGGCTTCGTTGCAGCGATATATTCACGCGTTTGATGCTTCCGGAGGGTTTTCCAGACAGTGTCACCAGCGACTATCTGGAATATTCCCTTTGGCGAGGAGTCCAGGGGATTGCCAGCCAAGTTAGTGGGGTGCTTGCAACTCAGGTGCCCATTTAAGTTCATCTGTGGTTCCTCTTTCCTATTTCTCATCCAACAAAAAaGTAATTTACTGAATTTTGCTTGAACCCTCGCTGGGAACCAGGCACTGCTTTATGCTGTTGGATTGGGGAAAGGAGCTATTCCGACTGCTGCTGCAGTGAATTGGGTACTGAAAGATGGATTTGGATATCTAAGTAAAATTTTTCTCTCAAAATATGGACGGCACTTTGATGTTCATCCGAAGGGGTGGAGGTTGTTCGCTGATCTTCTGGAAAACGCTGCCTATGGGATGGAAATGTTAACTCCCGCATTTCCCCTCCATTTTGTCGTGATCGGTGCTGCTGCTGGGGCCGGACGATCTGCAGCTGCCTTGATTCAG

mRNA sequence

ATGAACACCGAGTCTATTTGGGAAGTAAAAGGAGGTAAGCGAATCCGCCTCATTCTCGATACGTATAGAGATGAGTTCCATGTTGCAACTGGCATGCCGTCGTCTTCGTTATCCTTTTCCTTTGTCAACGTTTGGCTTCGTTGCAGCGATATATTCACGCGTTTGATGCTTCCGGAGGGTTTTCCAGACAGTGTCACCAGCGACTATCTGGAATATTCCCTTTGGCGAGGAGTCCAGGGGATTGCCAGCCAAGTTAGTGGGGTGCTTGCAACTCAGGCACTGCTTTATGCTGTTGGATTGGGGAAAGGAGCTATTCCGACTGCTGCTGCAGTGAATTGGGTACTGAAAGATGGATTTGGATATCTAAGTAAAATTTTTCTCTCAAAATATGGACGGCACTTTGATGTTCATCCGAAGGGGTGGAGGTTGTTCGCTGATCTTCTGGAAAACGCTGCCTATGGGATGGAAATGTTAACTCCCGCATTTCCCCTCCATTTTGTCGTGATCGGTGCTGCTGCTGGGGCCGGACGATCTGCAGCTGCCTTGATTCAG

Coding sequence (CDS)

ATGAACACCGAGTCTATTTGGGAAGTAAAAGGAGGTAAGCGAATCCGCCTCATTCTCGATACGTATAGAGATGAGTTCCATGTTGCAACTGGCATGCCGTCGTCTTCGTTATCCTTTTCCTTTGTCAACGTTTGGCTTCGTTGCAGCGATATATTCACGCGTTTGATGCTTCCGGAGGGTTTTCCAGACAGTGTCACCAGCGACTATCTGGAATATTCCCTTTGGCGAGGAGTCCAGGGGATTGCCAGCCAAGTTAGTGGGGTGCTTGCAACTCAGGCACTGCTTTATGCTGTTGGATTGGGGAAAGGAGCTATTCCGACTGCTGCTGCAGTGAATTGGGTACTGAAAGATGGATTTGGATATCTAAGTAAAATTTTTCTCTCAAAATATGGACGGCACTTTGATGTTCATCCGAAGGGGTGGAGGTTGTTCGCTGATCTTCTGGAAAACGCTGCCTATGGGATGGAAATGTTAACTCCCGCATTTCCCCTCCATTTTGTCGTGATCGGTGCTGCTGCTGGGGCCGGACGATCTGCAGCTGCCTTGATTCAG

Protein sequence

MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQ

Homology

[Close]

BLAST of Cucsa.031830 vs. Swiss-Prot
Match: RUS1_ARATH (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.2e-72
Identity = 134/181 (74.03%), Postives = 153/181 (84.53%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEGFPD 63
           E++WEV+G KR RL+ D  +DEF         S S +  N+  +C ++ T+ +LPEGFP+
Sbjct: 146 ETVWEVRGSKRKRLVPDFVKDEFVSEESAFELSSSLTPENLLAQCRNLLTQFLLPEGFPN 205

Query: 64  SVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLS 123
           SVTSDYL+YSLWRGVQGIASQ+SGVLATQ+LLYAVGLGKGAIPTAAA+NWVLKDG GYLS
Sbjct: 206 SVTSDYLDYSLWRGVQGIASQISGVLATQSLLYAVGLGKGAIPTAAAINWVLKDGIGYLS 265

Query: 124 KIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALI 183
           KI LSKYGRHFDVHPKGWRLFADLLENAA+GMEMLTP FP  FV+IGAAAGAGRSAAALI
Sbjct: 266 KIMLSKYGRHFDVHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMIGAAAGAGRSAAALI 325

Query: 184 Q 185
           Q
Sbjct: 326 Q 326

[Close]

BLAST of Cucsa.031830 vs. Swiss-Prot
Match: RUS1_MOUSE (RUS1 family protein C16orf58 homolog OS=Mus musculus PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.6e-24
Identity = 60/143 (41.96%), Postives = 86/143 (60.14%), Query Frame = 1


Query: 55  LMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAVNW 114
           ++LP+GFPDSV+ DYL Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA   W
Sbjct: 74  VLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTW 133

Query: 115 VLKDGFGYLSKIFLSKY-GRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFV----- 174
           ++KD  G L +I L+ + G   D + K WRLFAD+L + A  +E++ P +P+ F      
Sbjct: 134 LVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVST 193

Query: 175 ------VIGAAAGAGRSAAALIQ 185
                 ++G A GA R+A  + Q
Sbjct: 194 SNLAKCIVGVAGGATRAALTMHQ 216

[Close]

BLAST of Cucsa.031830 vs. Swiss-Prot
Match: RUS1_RAT (RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-23
Identity = 59/143 (41.26%), Postives = 86/143 (60.14%), Query Frame = 1


Query: 55  LMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAVNW 114
           ++LP+GFPDSV+ DYL+Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA   W
Sbjct: 74  VLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTW 133

Query: 115 VLKDGFGYLSKIFLSKY-GRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFV----- 174
           ++KD  G L +I  + + G   D + K WRLFAD+L + A  +E++ P +P+ F      
Sbjct: 134 LVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVST 193

Query: 175 ------VIGAAAGAGRSAAALIQ 185
                 ++G A GA R+A  + Q
Sbjct: 194 SNLAKCIVGVAGGATRAALTMHQ 216

[Close]

BLAST of Cucsa.031830 vs. Swiss-Prot
Match: RUS1_HUMAN (RUS1 family protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 7.3e-23
Identity = 72/197 (36.55%), Postives = 100/197 (50.76%), Query Frame = 1


Query: 7   WEVKGGK-----RIRLILDTYRDEFHV-ATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 66
           WEV G +     R   +    RD   V A+G PS  LS                + LP+G
Sbjct: 34  WEVGGWRWWGLSRAFTVKPEGRDAGEVGASGAPSPPLSG------------LQAVFLPQG 93

Query: 67  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAVNWVLKDGF 126
           FPDSV+ DYL Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA   W++KD  
Sbjct: 94  FPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDST 153

Query: 127 GYLSKIFLSKY-GRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFV----------- 185
           G L +I  + + G   D + K WRLFAD+L + A  +E++ P +P+ F            
Sbjct: 154 GMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKC 213

[Close]

BLAST of Cucsa.031830 vs. Swiss-Prot
Match: RUS1_PONAB (RUS1 family protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-22
Identity = 72/197 (36.55%), Postives = 99/197 (50.25%), Query Frame = 1


Query: 7   WEVKGGK-----RIRLILDTYRDEFHV-ATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 66
           WEV G +     R   +    RD   V A G PS  LS                + LP+G
Sbjct: 34  WEVGGWRWWGLSRAFTVKPEGRDSGEVGAPGAPSPPLSG------------LQAVFLPQG 93

Query: 67  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAVNWVLKDGF 126
           FPDSV+ DYL Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA   W++KD  
Sbjct: 94  FPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDST 153

Query: 127 GYLSKIFLSKY-GRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFV----------- 185
           G L +I  + + G   D + K WRLFAD+L + A  +E++ P +P+ F            
Sbjct: 154 GMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKC 213

[Close]

BLAST of Cucsa.031830 vs. TrEMBL
Match: A0A0A0L6U1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257050 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.3e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 60
           MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG
Sbjct: 156 MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 215

Query: 61  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 120
           FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG
Sbjct: 216 FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 275

Query: 121 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 180
           YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA
Sbjct: 276 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 335

Query: 181 ALIQ 185
           ALIQ
Sbjct: 336 ALIQ 339

[Close]

BLAST of Cucsa.031830 vs. TrEMBL
Match: A5C750_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025492 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.1e-73
Identity = 138/184 (75.00%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVAT---GMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 63
           E +WEV+GGK  ++I D+ +DEF V T   G   +  S +  N+WL+C ++F RLMLPEG
Sbjct: 165 EGVWEVRGGKWHKIIPDSSKDEFLVVTPGIGAVGAPKSSTLPNLWLQCKELFLRLMLPEG 224

Query: 64  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 123
           FP SVTSDYL+Y+LWRGVQG+ASQ+SGVLATQALLYAVGLGKGAIPTAAAVNWVLKDG G
Sbjct: 225 FPHSVTSDYLDYTLWRGVQGVASQISGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGIG 284

Query: 124 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 183
           YLSKI LSKYGRHFDVHPKGWRLFADLLENAAYG+E+LTPAFP  F++IGA AGAGRSAA
Sbjct: 285 YLSKILLSKYGRHFDVHPKGWRLFADLLENAAYGLEILTPAFPHQFLLIGAVAGAGRSAA 344

Query: 184 ALIQ 185
           ALIQ
Sbjct: 345 ALIQ 348

[Close]

BLAST of Cucsa.031830 vs. TrEMBL
Match: D7SX09_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00220 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.1e-73
Identity = 138/184 (75.00%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVAT---GMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 63
           E +WEV+GGK  ++I D+ +DEF V T   G   +  S +  N+WL+C ++F RLMLPEG
Sbjct: 32  EGVWEVRGGKWHKIIPDSSKDEFLVVTPGIGAVGAPKSSTLPNLWLQCKELFLRLMLPEG 91

Query: 64  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 123
           FP SVTSDYL+Y+LWRGVQG+ASQ+SGVLATQALLYAVGLGKGAIPTAAAVNWVLKDG G
Sbjct: 92  FPHSVTSDYLDYTLWRGVQGVASQISGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGIG 151

Query: 124 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 183
           YLSKI LSKYGRHFDVHPKGWRLFADLLENAAYG+E+LTPAFP  F++IGA AGAGRSAA
Sbjct: 152 YLSKILLSKYGRHFDVHPKGWRLFADLLENAAYGLEILTPAFPHQFLLIGAVAGAGRSAA 211

Query: 184 ALIQ 185
           ALIQ
Sbjct: 212 ALIQ 215

[Close]

BLAST of Cucsa.031830 vs. TrEMBL
Match: B9S1T9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0868190 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 7.8e-72
Identity = 140/188 (74.47%), Postives = 161/188 (85.64%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVATGMPSSS---LSFSFVN----VWLRCSDIFTRLM 63
           +S+W VKG KRIRLI D  +DEF V   +PSS    +S S+++    +WL+C  +F RLM
Sbjct: 77  DSVWVVKGSKRIRLIPDFIKDEFLVNPSLPSSYDDIISSSWLHFGRTLWLQCRALFVRLM 136

Query: 64  LPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLK 123
           LPEG+P SVTSDYL+YSLWRGVQG+ASQ+SGVLATQALLYA+GLGKGAIPTAAA+NWVLK
Sbjct: 137 LPEGYPHSVTSDYLDYSLWRGVQGVASQISGVLATQALLYAIGLGKGAIPTAAAINWVLK 196

Query: 124 DGFGYLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAG 183
           DG GYLSKI LSKYGRHFDV+PKGWRLFADLLENAA+G+E+LTPAFP  FV IGAAAGAG
Sbjct: 197 DGIGYLSKIVLSKYGRHFDVNPKGWRLFADLLENAAFGLEILTPAFPHLFVFIGAAAGAG 256

Query: 184 RSAAALIQ 185
           RSAAALIQ
Sbjct: 257 RSAAALIQ 264

[Close]

BLAST of Cucsa.031830 vs. TrEMBL
Match: A0A061G7F3_THECC (Uncharacterized protein isoform 5 OS=Theobroma cacao GN=TCM_016682 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.0e-71
Identity = 137/179 (76.54%), Postives = 152/179 (84.92%), Query Frame = 1


Query: 6   IWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEGFPDSV 65
           +WEVKG K  +LI D   D F  + G+ + + S S   VW +C DI  RL+LPEGFPDSV
Sbjct: 136 VWEVKGSKWTKLIPDFSEDAFVASNGIVNLTKSLSLSTVWRQCRDIVMRLLLPEGFPDSV 195

Query: 66  TSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKI 125
           TSDYL+YSLWRGVQG+ASQ+SGVLATQALLYAVGLGKGAIPTAAA+NWVLKDG GYLSKI
Sbjct: 196 TSDYLDYSLWRGVQGVASQISGVLATQALLYAVGLGKGAIPTAAAINWVLKDGIGYLSKI 255

Query: 126 FLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQ 185
            LSKYGRHFDV+PKGWRLFADLLENAA+G+EMLTPAFP  FV IGAAAGAGRSAAALIQ
Sbjct: 256 MLSKYGRHFDVNPKGWRLFADLLENAAFGLEMLTPAFPHLFVPIGAAAGAGRSAAALIQ 314

[Close]

BLAST of Cucsa.031830 vs. TAIR10
Match: AT3G45890.1 (AT3G45890.1 Protein of unknown function, DUF647)

HSP 1 Score: 273.1 bits (697), Expect = 1.3e-73
Identity = 134/181 (74.03%), Postives = 153/181 (84.53%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEGFPD 63
           E++WEV+G KR RL+ D  +DEF         S S +  N+  +C ++ T+ +LPEGFP+
Sbjct: 146 ETVWEVRGSKRKRLVPDFVKDEFVSEESAFELSSSLTPENLLAQCRNLLTQFLLPEGFPN 205

Query: 64  SVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLS 123
           SVTSDYL+YSLWRGVQGIASQ+SGVLATQ+LLYAVGLGKGAIPTAAA+NWVLKDG GYLS
Sbjct: 206 SVTSDYLDYSLWRGVQGIASQISGVLATQSLLYAVGLGKGAIPTAAAINWVLKDGIGYLS 265

Query: 124 KIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALI 183
           KI LSKYGRHFDVHPKGWRLFADLLENAA+GMEMLTP FP  FV+IGAAAGAGRSAAALI
Sbjct: 266 KIMLSKYGRHFDVHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMIGAAAGAGRSAAALI 325

Query: 184 Q 185
           Q
Sbjct: 326 Q 326

[Close]

BLAST of Cucsa.031830 vs. TAIR10
Match: AT1G13770.1 (AT1G13770.1 Protein of unknown function, DUF647)

HSP 1 Score: 104.4 bits (259), Expect = 7.8e-23
Identity = 68/172 (39.53%), Postives = 93/172 (54.07%), Query Frame = 1


Query: 26  FHVATGMPSSSLSFS-----FVNVWLRCSDIFTRLMLPEGFPDSVTSDYLEYSLWRGVQG 85
           F  AT   SSSLS       F +VW R    F    +PEGFP SVT DY+ + LW  +QG
Sbjct: 26  FKTATITASSSLSIQRSANRFNHVWRRVLQAF----VPEGFPGSVTPDYVGFQLWDTLQG 85

Query: 86  IASQVSGVLATQALLYAVGLG-KGAIPTAAAVNWVLKDGFGYLSKIFLSKY-GRHFDVHP 145
           +++    +L+TQALL A+G+G K A    A   W L+D  G L  I  + Y G + D + 
Sbjct: 86  LSTYTKMMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNA 145

Query: 146 KGWRLFADLLENAAYGMEMLTPAFPLHFVVI-----------GAAAGAGRSA 180
           K WRL ADL+ +    M++L+P FP  F+V+           G A+GA R+A
Sbjct: 146 KMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAA 193

[Close]

BLAST of Cucsa.031830 vs. TAIR10
Match: AT5G01510.1 (AT5G01510.1 Protein of unknown function, DUF647)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20
Identity = 54/157 (34.39%), Postives = 84/157 (53.50%), Query Frame = 1


Query: 34  SSSLSFSFVNV-WLRCSDIFTRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQ 93
           S S + S  N+ WL   D+    + P GFP SV+ DYL+Y LW+    I   +  VL T 
Sbjct: 98  SQSSNSSETNILWL--PDVVRDFVFPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTS 157

Query: 94  ALLYAVGLGK--------GAIPTAAAVNWVLKDGFGYLSKIFL-SKYGRHFDVHPKGWRL 153
           +LL AVG+G          A  +AAA+ WV KDG G L ++ +  ++G  FD  PK WR+
Sbjct: 158 SLLKAVGVGSFSGTSAAATAAASAAAIRWVSKDGIGALGRLLIGGRFGSLFDDDPKQWRM 217

Query: 154 FADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 181
           +AD + +A    ++ T  +P  F+++ +     ++ A
Sbjct: 218 YADFIGSAGSFFDLATQLYPSQFLLLASTGNLAKAVA 252

[Close]

BLAST of Cucsa.031830 vs. TAIR10
Match: AT5G49820.1 (AT5G49820.1 Protein of unknown function, DUF647)

HSP 1 Score: 92.4 bits (228), Expect = 3.1e-19
Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 1


Query: 29  ATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 88
           A  + S    F  V  +LR        ++PEGFP SV   Y+ Y  WR ++       GV
Sbjct: 91  AISLESPQTPFDEVGSFLRS------YVVPEGFPGSVNESYVPYMTWRALKHFFGGAMGV 150

Query: 89  LATQALLYAVGLGKGAIPTAA-AVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRLFADL 148
             TQ LL +VG  + +  +AA A+NW+LKDG G + K+  ++ G+ FD   K  R   DL
Sbjct: 151 FTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDL 210

Query: 149 LENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAAL 183
           L     G+E+ T A P  F+ +  AA   ++ AA+
Sbjct: 211 LMELGAGVELATAAVPHLFLPLACAANVVKNVAAV 239

[Close]

BLAST of Cucsa.031830 vs. TAIR10
Match: AT2G31190.1 (AT2G31190.1 Protein of unknown function, DUF647)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-18
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 1


Query: 52  FTRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAV 111
           F     P G+P SV   YL Y+ +R +Q  +S    VL+TQ+LL+A GL +     A  V
Sbjct: 67  FLNKFFPSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGL-RPTPAQATVV 126

Query: 112 NWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGA 171
           +W+LKDG  ++ K+  S  G   D  PK WR+ AD+L +   G+E+++P  P  F+ +  
Sbjct: 127 SWILKDGMQHVGKLICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEM-- 186

Query: 172 AAGAGRSAAAL 183
            AG G  A  +
Sbjct: 187 -AGLGNFAKGM 193

[Close]

BLAST of Cucsa.031830 vs. NCBI nr
Match: gi|778680559|ref|XP_011651345.1| (PREDICTED: protein root UVB sensitive 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 3.3e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 60
           MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG
Sbjct: 156 MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 215

Query: 61  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 120
           FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG
Sbjct: 216 FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 275

Query: 121 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 180
           YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA
Sbjct: 276 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 335

Query: 181 ALIQ 185
           ALIQ
Sbjct: 336 ALIQ 339

[Close]

BLAST of Cucsa.031830 vs. NCBI nr
Match: gi|700202567|gb|KGN57700.1| (hypothetical protein Csa_3G257050 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 3.3e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 1


Query: 1   MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 60
           MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG
Sbjct: 156 MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 215

Query: 61  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 120
           FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG
Sbjct: 216 FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 275

Query: 121 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 180
           YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA
Sbjct: 276 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 335

Query: 181 ALIQ 185
           ALIQ
Sbjct: 336 ALIQ 339

[Close]

BLAST of Cucsa.031830 vs. NCBI nr
Match: gi|659098056|ref|XP_008449956.1| (PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 8.2e-99
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 1


Query: 1   MNTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 60
           M TESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIF RLMLPEG
Sbjct: 155 MKTESIWEVKGGKRIRLILDTYRDEFHVATGMPSSSLSFSFVNVWLRCSDIFKRLMLPEG 214

Query: 61  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 120
           FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG
Sbjct: 215 FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 274

Query: 121 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 180
           YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA
Sbjct: 275 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 334

Query: 181 ALIQ 185
           ALIQ
Sbjct: 335 ALIQ 338

[Close]

BLAST of Cucsa.031830 vs. NCBI nr
Match: gi|147807901|emb|CAN62157.1| (hypothetical protein VITISV_025492 [Vitis vinifera])

HSP 1 Score: 282.7 bits (722), Expect = 4.5e-73
Identity = 138/184 (75.00%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVAT---GMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 63
           E +WEV+GGK  ++I D+ +DEF V T   G   +  S +  N+WL+C ++F RLMLPEG
Sbjct: 165 EGVWEVRGGKWHKIIPDSSKDEFLVVTPGIGAVGAPKSSTLPNLWLQCKELFLRLMLPEG 224

Query: 64  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 123
           FP SVTSDYL+Y+LWRGVQG+ASQ+SGVLATQALLYAVGLGKGAIPTAAAVNWVLKDG G
Sbjct: 225 FPHSVTSDYLDYTLWRGVQGVASQISGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGIG 284

Query: 124 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 183
           YLSKI LSKYGRHFDVHPKGWRLFADLLENAAYG+E+LTPAFP  F++IGA AGAGRSAA
Sbjct: 285 YLSKILLSKYGRHFDVHPKGWRLFADLLENAAYGLEILTPAFPHQFLLIGAVAGAGRSAA 344

Query: 184 ALIQ 185
           ALIQ
Sbjct: 345 ALIQ 348

[Close]

BLAST of Cucsa.031830 vs. NCBI nr
Match: gi|296082804|emb|CBI21809.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 282.7 bits (722), Expect = 4.5e-73
Identity = 138/184 (75.00%), Postives = 158/184 (85.87%), Query Frame = 1


Query: 4   ESIWEVKGGKRIRLILDTYRDEFHVAT---GMPSSSLSFSFVNVWLRCSDIFTRLMLPEG 63
           E +WEV+GGK  ++I D+ +DEF V T   G   +  S +  N+WL+C ++F RLMLPEG
Sbjct: 32  EGVWEVRGGKWHKIIPDSSKDEFLVVTPGIGAVGAPKSSTLPNLWLQCKELFLRLMLPEG 91

Query: 64  FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFG 123
           FP SVTSDYL+Y+LWRGVQG+ASQ+SGVLATQALLYAVGLGKGAIPTAAAVNWVLKDG G
Sbjct: 92  FPHSVTSDYLDYTLWRGVQGVASQISGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGIG 151

Query: 124 YLSKIFLSKYGRHFDVHPKGWRLFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAA 183
           YLSKI LSKYGRHFDVHPKGWRLFADLLENAAYG+E+LTPAFP  F++IGA AGAGRSAA
Sbjct: 152 YLSKILLSKYGRHFDVHPKGWRLFADLLENAAYGLEILTPAFPHQFLLIGAVAGAGRSAA 211

Query: 184 ALIQ 185
           ALIQ
Sbjct: 212 ALIQ 215

The following BLAST results are available for this feature:

BLAST of Cucsa.031830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RUS1_ARATH	2.2e-72	74.03	Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1...	[more]
RUS1_MOUSE	8.6e-24	41.96	RUS1 family protein C16orf58 homolog OS=Mus musculus PE=1 SV=1	[more]
RUS1_RAT	1.1e-23	41.26	RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1	[more]
RUS1_HUMAN	7.3e-23	36.55	RUS1 family protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2	[more]
RUS1_PONAB	1.6e-22	36.55	RUS1 family protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1	[more]

BLAST of Cucsa.031830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6U1_CUCSA	2.3e-100	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G257050 PE=4 SV=1	[more]
A5C750_VITVI	3.1e-73	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025492 PE=4 SV=1	[more]
D7SX09_VITVI	3.1e-73	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00220 PE=4 SV=...	[more]
B9S1T9_RICCO	7.8e-72	74.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0868190 PE=4 SV=1	[more]
A0A061G7F3_THECC	1.0e-71	76.54	Uncharacterized protein isoform 5 OS=Theobroma cacao GN=TCM_016682 PE=4 SV=1	[more]

BLAST of Cucsa.031830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45890.1	1.3e-73	74.03	Protein of unknown function, DUF647	[more]
AT1G13770.1	7.8e-23	39.53	Protein of unknown function, DUF647	[more]
AT5G01510.1	1.2e-20	34.39	Protein of unknown function, DUF647	[more]
AT5G49820.1	3.1e-19	34.84	Protein of unknown function, DUF647	[more]
AT2G31190.1	2.0e-18	36.64	Protein of unknown function, DUF647	[more]

BLAST of Cucsa.031830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680559\|ref\|XP_011651345.1\|	3.3e-100	100.00	PREDICTED: protein root UVB sensitive 1, chloroplastic [Cucumis sativus]	[more]
gi\|700202567\|gb\|KGN57700.1\|	3.3e-100	100.00	hypothetical protein Csa_3G257050 [Cucumis sativus]	[more]
gi\|659098056\|ref\|XP_008449956.1\|	8.2e-99	98.91	PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis melo]	[more]
gi\|147807901\|emb\|CAN62157.1\|	4.5e-73	75.00	hypothetical protein VITISV_025492 [Vitis vinifera]	[more]
gi\|296082804\|emb\|CBI21809.3\|	4.5e-73	75.00	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006968	RUS_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0010224	response to UV-B
biological_process	GO:0008150	biological_process
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.031830.1	Cucsa.031830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	FAMILY NOT NAMED	coord: 2..184 score: 7.5E
IPR006968	Root UVB sensitive family	PFAM	PF04884	DUF647	coord: 47..182 score: 8.2
None	No IPR available	PANTHER	PTHR12770:SF7	PROTEIN ROOT UVB SENSITIVE 1	coord: 2..184 score: 7.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.031830	Cla007130	Watermelon (97103) v1	cgywmB005
Cucsa.031830	Csa3G257050	Cucumber (Chinese Long) v2	cgycuB003
Cucsa.031830	MELO3C014739	Melon (DHL92) v3.5.1	cgymeB003
Cucsa.031830	ClCG05G012210	Watermelon (Charleston Gray)	cgywcgB005
Cucsa.031830	CSPI03G20190	Wild cucumber (PI 183967)	cgycpiB003
Cucsa.031830	CmaCh14G007870	Cucurbita maxima (Rimu)	cgycmaB0005
Cucsa.031830	CmoCh14G008020	Cucurbita moschata (Rifu)	cgycmoB0004
Cucsa.031830	Lsi05G004180	Bottle gourd (USVL1VR-Ls)	cgylsiB004
Cucsa.031830	MELO3C014739.2	Melon (DHL92) v3.6.1	cgymedB005
Cucsa.031830	CsaV3_3G020160	Cucumber (Chinese Long) v3	cgycucB006
Cucsa.031830	Cla97C05G094070	Watermelon (97103) v2	cgywmbB004
Cucsa.031830	Bhi01G001382	Wax gourd	cgywgoB004
Cucsa.031830	Carg22295	Silver-seed gourd	carcgyB0552

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.031830	Watermelon (Charleston Gray)	cgywcgB004
Cucsa.031830	Watermelon (97103) v1	cgywmB003
Cucsa.031830	Cucurbita pepo (Zucchini)	cgycpeB0009