Carg22295 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22295
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein root UVB sensitive 1, chloroplastic isoform X1
Location	Cucurbita_argyrosperma_scaffold_164 : 229103 .. 233072 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGACTGCCGTTCTCTTATCAGCTGCCGGAGCAGATTCCATTACGGCGAGTCTATGTCGATGTGTTAGACTACGTTCCAGGCGGCTGTTTTCACCATTACTCTACGCGAAGCTCATGCGCAGCACGAAGACCTCCGCTCAACGTATTTCCCGACCTTCTTAAGCCCATAAAACTTGCCCAAGGATGTTTCTCTCCTTGTATTGGAACTAGAATCAAACCTACCCTTGTTCATTCTCATTTGCTTCCTCCTTTGTTGGATGACGGCCATGGGTGTGGTGGAAACAATAATGGTGGTTGGAATAGTTCATACCGTTTTGGGGGTTTTGGGTGGTGGCAGGATGGCAGTAATTCTTCCCCAGGGTGGCGCAATGCCTTCCTTGCTCTCGTCCTTACCTCCGTTCTGGGTTGTTTCTGCCATTTTCAATTGGCCGCAGCACTAGCACGTAATGGTATGAACTCTGAGTCTGTTTGGGAAGTAAGAGGAGGTAAGCGAATCCGCCTCATTCTCGATACGTTTAGGGATGAGTTCTATGTTGCAACTGGCGTGCCGTCGTCTCCATTATCCTTTTCCTTTGTCAATTTTTGGCTTCGTTGCAGCGAAATATTCAAGCGTTTGATGCTTCCGGAGGGTTTTCCAGACAGTGTTACCAGTGACTATCTGGAATATTCTCTTTGGCGTGGAGTTCAGGGCATTGCCAGCCAAGTTAGTGGGGTTCTTGCTACTCAGGTGCCCATTTTCGTTCGTCTATGGTTCCTCTTACATGTTTCTCATTCAATAAAAGAATAATTGACTGCATTTTGCTTGAACCTCCGCCGTGATCCAGGCACTGCTTTATGCTGTTGGATTGGGAAAGGGAGCTATTCCAACTGCTGCTGCCGTGAATTGGGTACTGAAAGATGGATTTGGATATCTGAGTAAAATTTTACTCTCAAAATATGGACGGCACTTTGACGTCAATCCAAAGGGGTGGAGGTTGTTTGCTGATCTTCTGGAAAACGCTGCCTTTGGAATGGAAATGTTAACTCCCGCATTTCCCCTTCATTTTGTCGTCATCGGTGCTGCTGCTGGGGCTGGACGATCTGCAGCCGCCTTGATTCAGGTTATTGGAAGTTGATACATAATTTACACACAATATTGGAAGCGTGTCTCCTGTGCTTGTTGTCTCGTATTTATACATTTGATTTGGCTTAATTTGATTTAAATAGTGAAACACAGAAATATTTATTGAAACCAATAGATGGGCAATTGTAGAAGCTTTTGGTAGGTTATAGAGAATTCTGATTACATGCAATAAGAAGAAGACTTAAATCACAGATGCATTAGAGGTAGCGTTCTCTTTAACCATCAAAGTGGAGAAGAGGGATCACAGAGAAAGAAAGTTGTTCTGGGAGGAACTATAGATAGTGCCTTTTGGAGATATTGCGAGGGATTTTTGCATTTCAGTGGTCACTTGAACATTACTTGATGGTCACACAAAAAATTAGATGGTGGGAGGACTAAAAGCATAAGTAAATTTGATGCTACTTGGAAAGATGGAGCTGATTGAGTTACCTTTGAGCGCATTCCTATTCCCTCACCCTTGTACATGTTATAGCATCCAAGGAGTGGGCTGATATGATAGATTCCATGATTCAGAGTTCTTAGGAGGAACTAAACTATTTCAAACCACTCTGAATGGGCTCTTTTGGTAATGTAGTGATTCTTTTCTTTCTACTTGTATTTCAAAACCGGTGAATGCCTTCCTTTTTCTTCTAAATACAACCATTGGGTTTTATTTCTTTGGTTAGTTGCTAGTTTAACCATTGGTCGTTAGAGTTAGTTAAGTGATCAACCTTGTACTCACTAATATCATACTAGTGTTTGTTTACTCTGTGTACCGATGTTTGGTCTCTTATTAGATTCTATGTTTCTCTTTGGGCTTTGGTGGTGATGTCTTTTTGTCACTACTTACTAGGTCTTATTTTACTGGATTAGAGCCCCTTTTTGTAGTTTGTAGCTTGATTCCTCATTTTTATATACCCATGTATTCTTTTATATTTTCTCCTTGAAAGTTCAGTTTCTCATAGAAAATGGTTTTACTTGTCCTTTTAGTTTGCCCAAATTTGGTATCAGAACATTATATTCTCTGGGACCTAATGGCTGGAAAAGTGGCGGTCTATTCTGGTAGGGGGCTGAATGGAAACTCCCAAAAACTTAGTGAAATTTTGTAAACCAAATCTACAACTGAGCGCTTGTTGTTAGTTGAGAACTCCTTGGGCGAGTTACTAAAACATGGGTGAATTCCAAAGAATCCTAGGAAAATAGTGTCATGACACTTGGAAGACCTCACAGTGAACCAAAATCAAGAGAAGCTTGACAGGACAATCAGAGAGTTTCAAATAATGGATGTATGAGCTTCAAATAACTTCATCTTGAAATGGAGATGAATCTCTAAAGTCTTTTCAATATTAGACTCTCTGCAAAGAATAATTTCATTTCAGAGAGAAGCCAAATTTGCGTGAAGCTGATCAATCCATGCCAAAATTTGAGCAATATCAACATCTTTAGACTATTAGATAAGTAAAGAAGATTGATGCCCAAAGGAAACTTGGAGAAAGATGAACAGAAGATGGAAATTGATGCAACCAATGAAAATTTGAATTGGAGAAACTAGACCTTTGAACTGGAGAAAAACTTCTTCCTCAAGCAACAGAAAGGCATGCGAAAACACTTTCTTCCCGGAGACAAATTAAAACTCAAAAAGAAAAAGAAAAGAGTCCTTGGAAGAATAATATTTTTTTTTGTTTTTTCCTTTTTCGAAAGGAATAAATGTGGATAGGAGAAAAGTCACAACCAAAAAGAGAGAGAAACACCTTGAACAGAGACAAAAGACTTCTTCCGAAAAAACCTTTTTATGACTTAAACATCCTAACACCTTGATGAGAGAGAATCATTAATATCCTACAAAACTTTAAAAAGAAATTCCCTTCATATTGGTGAGAAAAGCCGCAATTAATTACAAAATTCATGATGAGATAGGAACCAACAGAATAAATCAACAACTTTATGAGATAGAATTATTAGTGCCTGACAAATCTTCAACGGAAACAGCGTTGAGGAAAAAAGTTGCATTTAATCAAATTTTAAGATGAAGGCTCGAGATTCAAAAGGTGGAACAATTAATGCAGATTAAAGAGATTTTTGTTTGGAAGAAATTCCAAAGGCACCTGAAAGAGAAAACATGCGCTCCAAATAAATAATAAAGCTTCCAATCGAGAATCTTTAATATAATTCTTTCTCTATGTACTCAGATGTTCTCTTATTTAGATGAAATTCTCAAAACTGAAGACCGGCAAGCATCAATGAGAGAGAAAATTTTGGTTGGAATAAAATTTTGAAGTTTTCTATTCATGTGCCATTTGTCATTATTTTCCTTTTTATCTTTCATTTTTTTTACTAGTAATCTGCTATGTGCACTTGGCCTGCTGGATTCTCTATCAAAACTTTAACATTAGTAGAAATACAAAAATATAAATTTCCTTGTGTTCTTATTTCTTGTTTGACATATCCACCAGCATATGCATCTATGGTTTTGTTAACTTCAACTCTTCAAGTCATTGATATCTCCCTCAACCTCTACATTTAGCTCTTTGATTACAAGTTCAATATCATATAATGGCATTTTACCTCATTCAAGCTTTTGTCGTTCATATAAGTTCCAAAAACTTTCTGCTTTATGACATATAAGTCTGGCTGAAAAAAGGCAAGCTCCAACTTAACATTCATGGGCTTACTGACTTCACCTTAAACACCTTGTAAAATAAACTACATTTTTGTAGAAAATTATTACTAATTTTAACTTAATGGAGTTGCATAGTTTTTGAAAGTTGAATCTTTTTCTTTTTTCTTTCTTTCTCAGGCTGCTACTAGGAGTTGTTTTTATGCTGGCTTTGCTGCTCAAAGGAATTTTGCCGAGGTGAAATAG

mRNA sequence

ATGTATGGACTGCCGTTCTCTTATCAGCTGCCGGAGCAGATTCCATTACGGCGAGTCTATGTCGATGTGTTAGACTACGTTCCAGGCGGCTGTTTTCACCATTACTCTACGCGAAGCTCATGCGCAGCACGAAGACCTCCGCTCAACGTATTTCCCGACCTTCTTAAGCCCATAAAACTTGCCCAAGGATGTTTCTCTCCTTGTATTGGAACTAGAATCAAACCTACCCTTGTTCATTCTCATTTGCTTCCTCCTTTGTTGGATGACGGCCATGGGTGTGGTGGAAACAATAATGGTGGTTGGAATAGTTCATACCGTTTTGGGGGTTTTGGGTGGTGGCAGGATGGCAGTAATTCTTCCCCAGGGTGGCGCAATGCCTTCCTTGCTCTCGTCCTTACCTCCGTTCTGGGTTGTTTCTGCCATTTTCAATTGGCCGCAGCACTAGCACGTAATGGTATGAACTCTGAGTCTGTTTGGGAAGTAAGAGGAGGTAAGCGAATCCGCCTCATTCTCGATACGTTTAGGGATGAGTTCTATGTTGCAACTGGCGTGCCGTCGTCTCCATTATCCTTTTCCTTTGTCAATTTTTGGCTTCGTTGCAGCGAAATATTCAAGCGTTTGATGCTTCCGGAGGGTTTTCCAGACAGTGTTACCAGTGACTATCTGGAATATTCTCTTTGGCGTGGAGTTCAGGGCATTGCCAGCCAAGTTAGTGGGGTTCTTGCTACTCAGGCACTGCTTTATGCTGTTGGATTGGGAAAGGGAGCTATTCCAACTGCTGCTGCCGTGAATTGGGTACTGAAAGATGGATTTGGATATCTGAGTAAAATTTTACTCTCAAAATATGGACGGCACTTTGACGTCAATCCAAAGGGGTGGAGGTTGTTTGCTGATCTTCTGGAAAACGCTGCCTTTGGAATGGAAATGTTAACTCCCGCATTTCCCCTTCATTTTGTCGTCATCGGTGCTGCTGCTGGGGCTGGACGATCTGCAGCCGCCTTGATTCAGGCTGCTACTAGGAGTTGTTTTTATGCTGGCTTTGCTGCTCAAAGGAATTTTGCCGAGGTGAAATAG

Coding sequence (CDS)

ATGTATGGACTGCCGTTCTCTTATCAGCTGCCGGAGCAGATTCCATTACGGCGAGTCTATGTCGATGTGTTAGACTACGTTCCAGGCGGCTGTTTTCACCATTACTCTACGCGAAGCTCATGCGCAGCACGAAGACCTCCGCTCAACGTATTTCCCGACCTTCTTAAGCCCATAAAACTTGCCCAAGGATGTTTCTCTCCTTGTATTGGAACTAGAATCAAACCTACCCTTGTTCATTCTCATTTGCTTCCTCCTTTGTTGGATGACGGCCATGGGTGTGGTGGAAACAATAATGGTGGTTGGAATAGTTCATACCGTTTTGGGGGTTTTGGGTGGTGGCAGGATGGCAGTAATTCTTCCCCAGGGTGGCGCAATGCCTTCCTTGCTCTCGTCCTTACCTCCGTTCTGGGTTGTTTCTGCCATTTTCAATTGGCCGCAGCACTAGCACGTAATGGTATGAACTCTGAGTCTGTTTGGGAAGTAAGAGGAGGTAAGCGAATCCGCCTCATTCTCGATACGTTTAGGGATGAGTTCTATGTTGCAACTGGCGTGCCGTCGTCTCCATTATCCTTTTCCTTTGTCAATTTTTGGCTTCGTTGCAGCGAAATATTCAAGCGTTTGATGCTTCCGGAGGGTTTTCCAGACAGTGTTACCAGTGACTATCTGGAATATTCTCTTTGGCGTGGAGTTCAGGGCATTGCCAGCCAAGTTAGTGGGGTTCTTGCTACTCAGGCACTGCTTTATGCTGTTGGATTGGGAAAGGGAGCTATTCCAACTGCTGCTGCCGTGAATTGGGTACTGAAAGATGGATTTGGATATCTGAGTAAAATTTTACTCTCAAAATATGGACGGCACTTTGACGTCAATCCAAAGGGGTGGAGGTTGTTTGCTGATCTTCTGGAAAACGCTGCCTTTGGAATGGAAATGTTAACTCCCGCATTTCCCCTTCATTTTGTCGTCATCGGTGCTGCTGCTGGGGCTGGACGATCTGCAGCCGCCTTGATTCAGGCTGCTACTAGGAGTTGTTTTTATGCTGGCTTTGCTGCTCAAAGGAATTTTGCCGAGGTGAAATAG

Protein sequence

MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKLAQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSSPGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEVK

Homology

[Close]

BLAST of Carg22295 vs. NCBI nr
Match: XP_022934441.1 (protein root UVB sensitive 1, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 737.3 bits (1902), Expect = 2.5e-209
Identity = 355/356 (99.72%), Postives = 355/356 (99.72%), Query Frame = 0


Query: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60
           MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL
Sbjct: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60

Query: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 120
           AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWW DGSNSS
Sbjct: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWHDGSNSS 120

Query: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180
           PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV
Sbjct: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180

Query: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240
           ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV
Sbjct: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240

Query: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300
           LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL
Sbjct: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300

Query: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV
Sbjct: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 356

[Close]

BLAST of Carg22295 vs. NCBI nr
Match: XP_022934442.1 (protein root UVB sensitive 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 737.3 bits (1902), Expect = 2.5e-209
Identity = 355/356 (99.72%), Postives = 355/356 (99.72%), Query Frame = 0


Query: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60
           MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL
Sbjct: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60

Query: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 120
           AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWW DGSNSS
Sbjct: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWHDGSNSS 120

Query: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180
           PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV
Sbjct: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180

Query: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240
           ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV
Sbjct: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240

Query: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300
           LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL
Sbjct: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300

Query: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV
Sbjct: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 356

[Close]

BLAST of Carg22295 vs. NCBI nr
Match: XP_023528607.1 (protein root UVB sensitive 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 724.5 bits (1869), Expect = 1.7e-205
Identity = 349/356 (98.03%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60
           MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFP LLKPIKL
Sbjct: 25  MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPHLLKPIKL 84

Query: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 120
           A G FSPCIGTRIKPTLVHSH LPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS
Sbjct: 85  AHGYFSPCIGTRIKPTLVHSHFLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 144

Query: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180
           P WRNAFLALVLTS++GCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV
Sbjct: 145 PRWRNAFLALVLTSIMGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 204

Query: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240
           ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV
Sbjct: 205 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 264

Query: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300
           LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL
Sbjct: 265 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 324

Query: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV
Sbjct: 325 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 380

[Close]

BLAST of Carg22295 vs. NCBI nr
Match: XP_023528606.1 (protein root UVB sensitive 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 724.5 bits (1869), Expect = 1.7e-205
Identity = 349/356 (98.03%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60
           MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFP LLKPIKL
Sbjct: 25  MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPHLLKPIKL 84

Query: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 120
           A G FSPCIGTRIKPTLVHSH LPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS
Sbjct: 85  AHGYFSPCIGTRIKPTLVHSHFLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 144

Query: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180
           P WRNAFLALVLTS++GCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV
Sbjct: 145 PRWRNAFLALVLTSIMGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 204

Query: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240
           ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV
Sbjct: 205 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 264

Query: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300
           LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL
Sbjct: 265 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 324

Query: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV
Sbjct: 325 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 380

[Close]

BLAST of Carg22295 vs. NCBI nr
Match: XP_022983514.1 (protein root UVB sensitive 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 723.0 bits (1865), Expect = 4.9e-205
Identity = 349/356 (98.03%), Postives = 352/356 (98.88%), Query Frame = 0


Query: 1   MYGLPFSYQLPEQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRPPLNVFPDLLKPIKL 60
           MYGLPFSYQLP QIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARR PLNVFP LLKPIKL
Sbjct: 1   MYGLPFSYQLPGQIPLRRVYVDVLDYVPGGCFHHYSTRSSCAARRRPLNVFPHLLKPIKL 60

Query: 61  AQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 120
           AQG FSPC+GTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS
Sbjct: 61  AQGYFSPCVGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQDGSNSS 120

Query: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFRDEFYV 180
           PGWRNAFLALVLTSVLGCFCHFQLAAALARNG+NSESVWEVRGGKRIRLILDTFRDEFYV
Sbjct: 121 PGWRNAFLALVLTSVLGCFCHFQLAAALARNGINSESVWEVRGGKRIRLILDTFRDEFYV 180

Query: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGV 240
           ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPD+VTSDYLEYSLWRGVQGIASQVSGV
Sbjct: 181 ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDTVTSDYLEYSLWRGVQGIASQVSGV 240

Query: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300
           LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL
Sbjct: 241 LATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLL 300

Query: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV
Sbjct: 301 ENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 356

[Close]

BLAST of Carg22295 vs. TAIR10
Match: AT3G45890.1 (Protein of unknown function, DUF647)

HSP 1 Score: 313.2 bits (801), Expect = 2.1e-85
Identity = 163/230 (70.87%), Postives = 182/230 (79.13%), Query Frame = 0


Query: 136 LGCFCHFQLAAALA-RNGMNS--------ESVWEVRGGKRIRLILDTFRDEFYVATGVPS 195
           L CF HF+L+AA A     NS        E+VWEVRG KR RL+ D  +DEF        
Sbjct: 117 LSCFFHFRLSAASAIAKDQNSDSNGDAVKETVWEVRGSKRKRLVPDFVKDEFVSEESAFE 176

Query: 196 SPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQAL 255
              S +  N   +C  +  + +LPEGFP+SVTSDYL+YSLWRGVQGIASQ+SGVLATQ+L
Sbjct: 177 LSSSLTPENLLAQCRNLLTQFLLPEGFPNSVTSDYLDYSLWRGVQGIASQISGVLATQSL 236

Query: 256 LYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLLENAAFG 315
           LYAVGLGKGAIPTAAA+NWVLKDG GYLSKI+LSKYGRHFDV+PKGWRLFADLLENAAFG
Sbjct: 237 LYAVGLGKGAIPTAAAINWVLKDGIGYLSKIMLSKYGRHFDVHPKGWRLFADLLENAAFG 296

Query: 316 MEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           MEMLTP FP  FV+IGAAAGAGRSAAALIQAATRSCF AGFA+QRNFAEV
Sbjct: 297 MEMLTPVFPQFFVMIGAAAGAGRSAAALIQAATRSCFNAGFASQRNFAEV 346

[Close]

BLAST of Carg22295 vs. TAIR10
Match: AT1G13770.1 (Protein of unknown function, DUF647)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-25
Identity = 72/186 (38.71%), Postives = 99/186 (53.23%), Query Frame = 0


Query: 178 FYVATGVPSSPLSFS-----FVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQG 237
           F  AT   SS LS       F + W R  + F    +PEGFP SVT DY+ + LW  +QG
Sbjct: 26  FKTATITASSSLSIQRSANRFNHVWRRVLQAF----VPEGFPGSVTPDYVGFQLWDTLQG 85

Query: 238 IASQVSGVLATQALLYAVGLG-KGAIPTAAAVNWVLKDGFGYLSKILLSKY-GRHFDVNP 297
           +++    +L+TQALL A+G+G K A    A   W L+D  G L  IL + Y G + D N 
Sbjct: 86  LSTYTKMMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNA 145

Query: 298 KGWRLFADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQ 357
           K WRL ADL+ +    M++L+P FP  F+V+       RS   +   ATR+     FA Q
Sbjct: 146 KMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAALTQHFALQ 205

[Close]

BLAST of Carg22295 vs. TAIR10
Match: AT5G49820.1 (Protein of unknown function, DUF647)

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-23
Identity = 65/199 (32.66%), Postives = 100/199 (50.25%), Query Frame = 0


Query: 164 GKRIRLILDT-----FRDEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVT 223
           G+R + + ++     F+     A  + S    F  V  +LR        ++PEGFP SV 
Sbjct: 69  GRRFKYVAESDGSGRFKKNSVRAISLESPQTPFDEVGSFLR------SYVVPEGFPGSVN 128

Query: 224 SDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAA-AVNWVLKDGFGYLSKI 283
             Y+ Y  WR ++       GV  TQ LL +VG  + +  +AA A+NW+LKDG G + K+
Sbjct: 129 ESYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKM 188

Query: 284 LLSKYGRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQA 343
           L ++ G+ FD + K  R   DLL     G+E+ T A P  F+ +  AA   ++ AA+   
Sbjct: 189 LFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNVAAVTST 248

Query: 344 ATRSCFYAGFAAQRNFAEV 357
           +TR+  Y  FA   N  +V
Sbjct: 249 STRTPIYKAFAKGENIGDV 261

[Close]

BLAST of Carg22295 vs. TAIR10
Match: AT2G31190.1 (Protein of unknown function, DUF647)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-22
Identity = 53/155 (34.19%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 202 EIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKGAIPTAA 261
           E F     P G+P SV   YL Y+ +R +Q  +S    VL+TQ+LL+A GL +     A 
Sbjct: 65  ESFLNKFFPSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGL-RPTPAQAT 124

Query: 262 AVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVI 321
            V+W+LKDG  ++ K++ S  G   D  PK WR+ AD+L +   G+E+++P  P  F+ +
Sbjct: 125 VVSWILKDGMQHVGKLICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEM 184

Query: 322 GAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
                  +  A +   ATR   Y+ FA + N +++
Sbjct: 185 AGLGNFAKGMATVAARATRLPIYSSFAKEGNLSDI 218

[Close]

BLAST of Carg22295 vs. TAIR10
Match: AT5G01510.1 (Protein of unknown function, DUF647)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-18
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 0


Query: 197 WLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGK-- 256
           WL   ++ +  + P GFP SV+ DYL+Y LW+    I   +  VL T +LL AVG+G   
Sbjct: 110 WL--PDVVRDFVFPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGVGSFS 169

Query: 257 ------GAIPTAAAVNWVLKDGFGYLSKILL-SKYGRHFDVNPKGWRLFADLLENAAFGM 316
                         + WV KDG G L ++L+  ++G  FD +PK WR++AD + +A    
Sbjct: 170 GTSXXXXXXXXXXXIRWVSKDGIGALGRLLIGGRFGSLFDDDPKQWRMYADFIGSAGSFF 229

Query: 317 EMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           ++ T  +P  F+++ +     ++ A  ++  +       FA   N  EV
Sbjct: 230 DLATQLYPSQFLLLASTGNLAKAVARGLRDPSFRVIQNHFAISGNLGEV 276

[Close]

BLAST of Carg22295 vs. Swiss-Prot
Match: sp|Q7X6P3|RUS1_ARATH (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS1 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 3.9e-84
Identity = 163/230 (70.87%), Postives = 182/230 (79.13%), Query Frame = 0


Query: 136 LGCFCHFQLAAALA-RNGMNS--------ESVWEVRGGKRIRLILDTFRDEFYVATGVPS 195
           L CF HF+L+AA A     NS        E+VWEVRG KR RL+ D  +DEF        
Sbjct: 117 LSCFFHFRLSAASAIAKDQNSDSNGDAVKETVWEVRGSKRKRLVPDFVKDEFVSEESAFE 176

Query: 196 SPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQAL 255
              S +  N   +C  +  + +LPEGFP+SVTSDYL+YSLWRGVQGIASQ+SGVLATQ+L
Sbjct: 177 LSSSLTPENLLAQCRNLLTQFLLPEGFPNSVTSDYLDYSLWRGVQGIASQISGVLATQSL 236

Query: 256 LYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRLFADLLENAAFG 315
           LYAVGLGKGAIPTAAA+NWVLKDG GYLSKI+LSKYGRHFDV+PKGWRLFADLLENAAFG
Sbjct: 237 LYAVGLGKGAIPTAAAINWVLKDGIGYLSKIMLSKYGRHFDVHPKGWRLFADLLENAAFG 296

Query: 316 MEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           MEMLTP FP  FV+IGAAAGAGRSAAALIQAATRSCF AGFA+QRNFAEV
Sbjct: 297 MEMLTPVFPQFFVMIGAAAGAGRSAAALIQAATRSCFNAGFASQRNFAEV 346

[Close]

BLAST of Carg22295 vs. Swiss-Prot
Match: sp|Q96GQ5|RUS1_HUMAN (RUS1 family protein C16orf58 OS=Homo sapiens OX=9606 GN=C16orf58 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 4.8e-26
Identity = 75/206 (36.41%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 159 WEVRGGK-----RIRLILDTFRDEFYV-ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEG 218
           WEV G +     R   +    RD   V A+G PS PLS              + + LP+G
Sbjct: 34  WEVGGWRWWGLSRAFTVKPEGRDAGEVGASGAPSPPLSG------------LQAVFLPQG 93

Query: 219 FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAVNWVLKDGF 278
           FPDSV+ DYL Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA   W++KD  
Sbjct: 94  FPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDST 153

Query: 279 GYLSKILLSKY-GRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRS 338
           G L +I+ + + G   D N K WRLFAD+L + A  +E++ P +P+ F +  + +   + 
Sbjct: 154 GMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKC 213

Query: 339 AAALIQAATRSCFYAGFAAQRNFAEV 357
             ++   ATR+      A + N A+V
Sbjct: 214 IVSVAGGATRAALTVHQARRNNMADV 227

[Close]

BLAST of Carg22295 vs. Swiss-Prot
Match: sp|Q5R8F6|RUS1_PONAB (RUS1 family protein C16orf58 homolog OS=Pongo abelii OX=9601 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-25
Identity = 75/206 (36.41%), Postives = 108/206 (52.43%), Query Frame = 0


Query: 159 WEVRGGK-----RIRLILDTFRDEFYV-ATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEG 218
           WEV G +     R   +    RD   V A G PS PLS              + + LP+G
Sbjct: 34  WEVGGWRWWGLSRAFTVKPEGRDSGEVGAPGAPSPPLSG------------LQAVFLPQG 93

Query: 219 FPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAVNWVLKDGF 278
           FPDSV+ DYL Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA   W++KD  
Sbjct: 94  FPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDST 153

Query: 279 GYLSKILLSKY-GRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRS 338
           G L +I+ + + G   D N K WRLFAD+L + A  +E++ P +P+ F +  + +   + 
Sbjct: 154 GMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKC 213

Query: 339 AAALIQAATRSCFYAGFAAQRNFAEV 357
             ++   ATR+      A + N A+V
Sbjct: 214 IVSVAGGATRAALTVHQARRNNMADV 227

[Close]

BLAST of Carg22295 vs. Swiss-Prot
Match: sp|Q91W34|RUS1_MOUSE (RUS1 family protein C16orf58 homolog OS=Mus musculus OX=10090 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-24
Identity = 61/154 (39.61%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 205 KRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAV 264
           + ++LP+GFPDSV+ DYL Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA  
Sbjct: 72  RSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATS 131

Query: 265 NWVLKDGFGYLSKILLSKY-GRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVIG 324
            W++KD  G L +I+L+ + G   D N K WRLFAD+L + A  +E++ P +P+ F +  
Sbjct: 132 TWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTV 191

Query: 325 AAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           + +   +    +   ATR+      A + N A+V
Sbjct: 192 STSNLAKCIVGVAGGATRAALTMHQARRNNMADV 225

[Close]

BLAST of Carg22295 vs. Swiss-Prot
Match: sp|Q499P8|RUS1_RAT (RUS1 family protein C16orf58 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24
Identity = 60/154 (38.96%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 205 KRLMLPEGFPDSVTSDYLEYSLWRGVQGIASQVSGVLATQALLYAVGLGKG-AIPTAAAV 264
           + ++LP+GFPDSV+ DYL+Y LW  VQ  AS +SG LATQA+L  +G+G   A  +AA  
Sbjct: 72  RSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATS 131

Query: 265 NWVLKDGFGYLSKILLSKY-GRHFDVNPKGWRLFADLLENAAFGMEMLTPAFPLHFVVIG 324
            W++KD  G L +I+ + + G   D N K WRLFAD+L + A  +E++ P +P+ F +  
Sbjct: 132 TWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTV 191

Query: 325 AAAGAGRSAAALIQAATRSCFYAGFAAQRNFAEV 357
           + +   +    +   ATR+      A + N A+V
Sbjct: 192 STSNLAKCIVGVAGGATRAALTMHQARRNNMADV 225

[Close]

BLAST of Carg22295 vs. TrEMBL
Match: tr|A0A1S4DXY4|A0A1S4DXY4_CUCME (protein root UVB sensitive 1, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.2e-162
Identity = 298/361 (82.55%), Postives = 313/361 (86.70%), Query Frame = 0


Query: 1   MYG-LPFSYQ-LPEQIPLRRVYVDVLDYVPGGCFHH---YSTRSSCAARRPPLNVFPDLL 60
           MYG LPFSYQ  PE IPLRRVYVDVL YVP   FHH    S R SC + RPPL+VFP  L
Sbjct: 1   MYGVLPFSYQPPPELIPLRRVYVDVLSYVPVRRFHHCLDSSMRRSCKSLRPPLSVFPHFL 60

Query: 61  KPIKLAQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQD 120
           KP KL +G  SPC GTRIKP LVHS   P L  DG+GC GNNNGGWN+S  FGGFGWWQ 
Sbjct: 61  KPAKLFRGYSSPCNGTRIKPALVHS---PLLAGDGYGCDGNNNGGWNNSNPFGGFGWWQY 120

Query: 121 GSNSSPGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFR 180
            S+S P   NAFLAL  TSVLGCFC FQLA ALARN M +ES+WEV+GGKRIRLILDT+R
Sbjct: 121 DSDSPPWSDNAFLALFFTSVLGCFCLFQLAVALARNDMKTESIWEVKGGKRIRLILDTYR 180

Query: 181 DEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240
           DEF+VATG+PSS LSFSFVN WLRCS+IFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS
Sbjct: 181 DEFHVATGMPSSSLSFSFVNVWLRCSDIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240

Query: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRL 300
           QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKI LSKYGRHFDV+PKGWRL
Sbjct: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRL 300

Query: 301 FADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 357
           FADLLENAA+GMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE
Sbjct: 301 FADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 358

[Close]

BLAST of Carg22295 vs. TrEMBL
Match: tr|A0A1S3BP56|A0A1S3BP56_CUCME (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.2e-162
Identity = 298/361 (82.55%), Postives = 313/361 (86.70%), Query Frame = 0


Query: 1   MYG-LPFSYQ-LPEQIPLRRVYVDVLDYVPGGCFHH---YSTRSSCAARRPPLNVFPDLL 60
           MYG LPFSYQ  PE IPLRRVYVDVL YVP   FHH    S R SC + RPPL+VFP  L
Sbjct: 1   MYGVLPFSYQPPPELIPLRRVYVDVLSYVPVRRFHHCLDSSMRRSCKSLRPPLSVFPHFL 60

Query: 61  KPIKLAQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQD 120
           KP KL +G  SPC GTRIKP LVHS   P L  DG+GC GNNNGGWN+S  FGGFGWWQ 
Sbjct: 61  KPAKLFRGYSSPCNGTRIKPALVHS---PLLAGDGYGCDGNNNGGWNNSNPFGGFGWWQY 120

Query: 121 GSNSSPGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFR 180
            S+S P   NAFLAL  TSVLGCFC FQLA ALARN M +ES+WEV+GGKRIRLILDT+R
Sbjct: 121 DSDSPPWSDNAFLALFFTSVLGCFCLFQLAVALARNDMKTESIWEVKGGKRIRLILDTYR 180

Query: 181 DEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240
           DEF+VATG+PSS LSFSFVN WLRCS+IFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS
Sbjct: 181 DEFHVATGMPSSSLSFSFVNVWLRCSDIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240

Query: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRL 300
           QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKI LSKYGRHFDV+PKGWRL
Sbjct: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRL 300

Query: 301 FADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 357
           FADLLENAA+GMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE
Sbjct: 301 FADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 358

[Close]

BLAST of Carg22295 vs. TrEMBL
Match: tr|A0A1S4DYP4|A0A1S4DYP4_CUCME (protein root UVB sensitive 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.2e-162
Identity = 298/361 (82.55%), Postives = 313/361 (86.70%), Query Frame = 0


Query: 1   MYG-LPFSYQ-LPEQIPLRRVYVDVLDYVPGGCFHH---YSTRSSCAARRPPLNVFPDLL 60
           MYG LPFSYQ  PE IPLRRVYVDVL YVP   FHH    S R SC + RPPL+VFP  L
Sbjct: 1   MYGVLPFSYQPPPELIPLRRVYVDVLSYVPVRRFHHCLDSSMRRSCKSLRPPLSVFPHFL 60

Query: 61  KPIKLAQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQD 120
           KP KL +G  SPC GTRIKP LVHS   P L  DG+GC GNNNGGWN+S  FGGFGWWQ 
Sbjct: 61  KPAKLFRGYSSPCNGTRIKPALVHS---PLLAGDGYGCDGNNNGGWNNSNPFGGFGWWQY 120

Query: 121 GSNSSPGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFR 180
            S+S P   NAFLAL  TSVLGCFC FQLA ALARN M +ES+WEV+GGKRIRLILDT+R
Sbjct: 121 DSDSPPWSDNAFLALFFTSVLGCFCLFQLAVALARNDMKTESIWEVKGGKRIRLILDTYR 180

Query: 181 DEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240
           DEF+VATG+PSS LSFSFVN WLRCS+IFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS
Sbjct: 181 DEFHVATGMPSSSLSFSFVNVWLRCSDIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240

Query: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRL 300
           QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKI LSKYGRHFDV+PKGWRL
Sbjct: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRL 300

Query: 301 FADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 357
           FADLLENAA+GMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE
Sbjct: 301 FADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 358

[Close]

BLAST of Carg22295 vs. TrEMBL
Match: tr|A0A1S4DXZ7|A0A1S4DXZ7_CUCME (protein root UVB sensitive 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=4 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 3.4e-162
Identity = 297/360 (82.50%), Postives = 312/360 (86.67%), Query Frame = 0


Query: 1   MYG-LPFSYQ-LPEQIPLRRVYVDVLDYVPGGCFHH---YSTRSSCAARRPPLNVFPDLL 60
           MYG LPFSYQ  PE IPLRRVYVDVL YVP   FHH    S R SC + RPPL+VFP  L
Sbjct: 1   MYGVLPFSYQPPPELIPLRRVYVDVLSYVPVRRFHHCLDSSMRRSCKSLRPPLSVFPHFL 60

Query: 61  KPIKLAQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQD 120
           KP KL +G  SPC GTRIKP LVHS   P L  DG+GC GNNNGGWN+S  FGGFGWWQ 
Sbjct: 61  KPAKLFRGYSSPCNGTRIKPALVHS---PLLAGDGYGCDGNNNGGWNNSNPFGGFGWWQY 120

Query: 121 GSNSSPGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTFR 180
            S+S P   NAFLAL  TSVLGCFC FQLA ALARN M +ES+WEV+GGKRIRLILDT+R
Sbjct: 121 DSDSPPWSDNAFLALFFTSVLGCFCLFQLAVALARNDMKTESIWEVKGGKRIRLILDTYR 180

Query: 181 DEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240
           DEF+VATG+PSS LSFSFVN WLRCS+IFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS
Sbjct: 181 DEFHVATGMPSSSLSFSFVNVWLRCSDIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIAS 240

Query: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWRL 300
           QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKI LSKYGRHFDV+PKGWRL
Sbjct: 241 QVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWRL 300

Query: 301 FADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 356
           FADLLENAA+GMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE
Sbjct: 301 FADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQAATRSCFYAGFAAQRNFAE 357

[Close]

BLAST of Carg22295 vs. TrEMBL
Match: tr|A0A0A0L6U1|A0A0A0L6U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257050 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 8.7e-150
Identity = 275/342 (80.41%), Postives = 289/342 (84.50%), Query Frame = 0


Query: 1   MYG-LPFSYQL--PEQIPLRRVYVDVLDYVPGGCFHH---YSTRSSCAARRPPLNVFPDL 60
           MYG LPFSYQ   PE IP R VYVDVL+YVP   FHH    S R SC A RP L+VFP  
Sbjct: 1   MYGVLPFSYQAPPPEPIPFRPVYVDVLNYVPVRRFHHCLDSSMRRSCTALRPSLSVFPHF 60

Query: 61  LKPIKLAQGCFSPCIGTRIKPTLVHSHLLPPLLDDGHGCGGNNNGGWNSSYRFGGFGWWQ 120
           LKP KL QG  SPC GTRIKP LVHS   P L  DGHGC GNNNGGWN+S  FGGFGWWQ
Sbjct: 61  LKPTKLFQGYSSPCNGTRIKPALVHS---PLLAGDGHGCDGNNNGGWNNSNPFGGFGWWQ 120

Query: 121 DGSNSSPGWRNAFLALVLTSVLGCFCHFQLAAALARNGMNSESVWEVRGGKRIRLILDTF 180
              +S P   NAFLA   +SVLGCFC FQLA ALARN MN+ES+WEV+GGKRIRLILDT+
Sbjct: 121 YDGDSPPWSDNAFLAFFFSSVLGCFCLFQLAVALARNNMNTESIWEVKGGKRIRLILDTY 180

Query: 181 RDEFYVATGVPSSPLSFSFVNFWLRCSEIFKRLMLPEGFPDSVTSDYLEYSLWRGVQGIA 240
           RDEF+VATG+PSS LSFSFVN WLRCS+IF RLMLPEGFPDSVTSDYLEYSLWRGVQGIA
Sbjct: 181 RDEFHVATGMPSSSLSFSFVNVWLRCSDIFTRLMLPEGFPDSVTSDYLEYSLWRGVQGIA 240

Query: 241 SQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKILLSKYGRHFDVNPKGWR 300
           SQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKI LSKYGRHFDV+PKGWR
Sbjct: 241 SQVSGVLATQALLYAVGLGKGAIPTAAAVNWVLKDGFGYLSKIFLSKYGRHFDVHPKGWR 300

Query: 301 LFADLLENAAFGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQ 337
           LFADLLENAA+GMEMLTPAFPLHFVVIGAAAGAGRSAAALIQ
Sbjct: 301 LFADLLENAAYGMEMLTPAFPLHFVVIGAAAGAGRSAAALIQ 339

The following BLAST results are available for this feature:

BLAST of Carg22295 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934441.1	2.5e-209	99.72	protein root UVB sensitive 1, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_022934442.1	2.5e-209	99.72	protein root UVB sensitive 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_023528607.1	1.7e-205	98.03	protein root UVB sensitive 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pe...	[more]
XP_023528606.1	1.7e-205	98.03	protein root UVB sensitive 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pe...	[more]
XP_022983514.1	4.9e-205	98.03	protein root UVB sensitive 1, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg22295 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45890.1	2.1e-85	70.87	Protein of unknown function, DUF647	[more]
AT1G13770.1	1.5e-25	38.71	Protein of unknown function, DUF647	[more]
AT5G49820.1	3.0e-23	32.66	Protein of unknown function, DUF647	[more]
AT2G31190.1	7.5e-22	34.19	Protein of unknown function, DUF647	[more]
AT5G01510.1	2.9e-18	30.18	Protein of unknown function, DUF647	[more]

BLAST of Carg22295 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7X6P3\|RUS1_ARATH	3.9e-84	70.87	Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
sp\|Q96GQ5\|RUS1_HUMAN	4.8e-26	36.41	RUS1 family protein C16orf58 OS=Homo sapiens OX=9606 GN=C16orf58 PE=1 SV=2	[more]
sp\|Q5R8F6\|RUS1_PONAB	1.1e-25	36.41	RUS1 family protein C16orf58 homolog OS=Pongo abelii OX=9601 PE=2 SV=1	[more]
sp\|Q91W34\|RUS1_MOUSE	1.2e-24	39.61	RUS1 family protein C16orf58 homolog OS=Mus musculus OX=10090 PE=1 SV=1	[more]
sp\|Q499P8\|RUS1_RAT	1.5e-24	38.96	RUS1 family protein C16orf58 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1	[more]

BLAST of Carg22295 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DXY4\|A0A1S4DXY4_CUCME	1.2e-162	82.55	protein root UVB sensitive 1, chloroplastic isoform X3 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S3BP56\|A0A1S3BP56_CUCME	1.2e-162	82.55	protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S4DYP4\|A0A1S4DYP4_CUCME	1.2e-162	82.55	protein root UVB sensitive 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S4DXZ7\|A0A1S4DXZ7_CUCME	3.4e-162	82.50	protein root UVB sensitive 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A0A0L6U1\|A0A0A0L6U1_CUCSA	8.7e-150	80.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257050 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006968	RUS_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22295-RA	Carg22295-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006968	Root UVB sensitive family	PFAM	PF04884	DUF647	coord: 200..356 e-value: 9.5E-50 score: 169.4
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	FAMILY NOT NAMED	coord: 87..356
None	No IPR available	PANTHER	PTHR12770:SF7	PROTEIN ROOT UVB SENSITIVE 1, CHLOROPLASTIC	coord: 87..356

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22295	Cla007130	Watermelon (97103) v1	carwmB0477
Carg22295	Csa3G257050	Cucumber (Chinese Long) v2	carcuB0513
Carg22295	MELO3C014739	Melon (DHL92) v3.5.1	carmeB0485
Carg22295	ClCG05G012210	Watermelon (Charleston Gray)	carwcgB0465
Carg22295	CSPI03G20190	Wild cucumber (PI 183967)	carcpiB0520
Carg22295	Cucsa.031830	Cucumber (Gy14) v1	carcgyB0552
Carg22295	CmaCh14G007870	Cucurbita maxima (Rimu)	carcmaB0668
Carg22295	CmoCh14G008020	Cucurbita moschata (Rifu)	carcmoB0650
Carg22295	Lsi05G004180	Bottle gourd (USVL1VR-Ls)	carlsiB435
Carg22295	CsGy3G019980	Cucumber (Gy14) v2	carcgybB0489
Carg22295	MELO3C014739.2	Melon (DHL92) v3.6.1	carmedB0491
Carg22295	CsaV3_3G020160	Cucumber (Chinese Long) v3	carcucB0518
Carg22295	Cla97C05G094070	Watermelon (97103) v2	carwmbB0504
Carg22295	Bhi01G001382	Wax gourd	carwgoB0582

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22295	Cucurbita pepo (Zucchini)	carcpeB0673
Carg22295	Watermelon (Charleston Gray)	carwcgB0464
Carg22295	Watermelon (97103) v1	carwmB0475
Carg22295	Watermelon (97103) v2	carwmbB0503
Carg22295	Wax gourd	carwgoB0584