Cucsa.012470 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.012470
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Major latex protein
Location	scaffold00164 : 28899 .. 31460 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGCAAGATTTGAAGCTAAACTTCAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGCAGCTCAAGTGTTCTGGTCACAAATTCTACGACTTTTTCACTAACAAAATGGACTCTGTCATTCAAATGTTTCCTCACATTGTTACAAGCTACAAAATTCTAGAAGGCAATGGTTTCGCTCATGGCAGCGTCATCCATCTAAAATATAACATAGGTGAGAATATTAATTTACCATATGCTTTTTCTATTTTGTTTTTGGTTGGTGAACTTTCAAATGTTATATTTTCACGTTCTAACAACAATTTTAATCCCTTTATACATATTCTAGAATCAATTATTTATATGCAGATATGATCAAAAAGTTTAGGATATATTACCTTTTTTTCTTGTTCGATCGAGTTCTACAAAATATGTGTGAGAATGAAGTTTAAAAAATCTTCGTGCAATTGTAAAACTGTCTTTAACATCATGAAAATTTTGGCTATAAATTTCCATTGGTATTTTATGAAAGATGATGGATAAACTATACATGACCGTGGTTTAGAAAAACACATCTTTCTTCAAAAAAACTTCGTGCATTGACATGAAATATCATATATGATACCGATGAAAGAAAAGTTGGTTGTCATGGCTATTCTAAACCACCATTGGAAGTCAAGAAAAGCCCAAAGAAATATATACAAATGTGCAACACTAGAAAAAGCTCTCTTTTTTAGTACAACAATTTGAGGTAGATGATTCAAACGACAGATCTTATGGTTATTACTACACTTTTATATCAGTTGACCTTTGTTTTGTTGGCCTAACGACTATGAATAAATTATTTAGCGAAGCGAACTTTTTTTATATCTATAGGCCTAAATAAATCCATTTTAGAATAACGATAAGTACATTATTCAATAGTATATTTCAAAAAAGATTGGACATATTACATGAAGATATTTGGAAACCTACGGTAATTTATTCAACTATTGAATTCATTATACGTTGTTCAATCAAATACCTCGACTACGTGTTTAAGTAAAAAGAGTAAAAGTAAAGATACCCATTTAATTTATAGATACATACATACATAAGAATAATCATCCTACTTTAAAATTAACATTTACAAAAATAACTCTAACAAACATTTTGGGTCTAAGAAGTCATAATTAGTTGATGTTAAACATATTAAGAAACATAAAATAATACTTACCAATAGTTTCATAAATTCGAGCTTTTAGGTTCCTTAGCTTAATTGAATTAGGTTCTTTTCTGGATTACCTTTTCCCATTTCTTTAAGCGAGAATTTCTCAAGTGTTTCAAATAAAAATTTGTTTCTCAAATTATAAAAGAGTTACGAAATAAAATAAAAAATTTACCAATATAATAAACCATACAAAAAAAATCATTTTTGATAACCATAAATGGTGACGTGATAAATAAAATATCAACTAGATTTGATATTTTGTTCATCATCACATTATCTGAAAAGGACTAACCATGTCATAGACACAAATTTTAATCTATCGCGATCGGTAAGAGATAGAAAGTAATTTATCTCATAGATATATATTTTTCTTACGGTATGTTTAATGGAAGTTTAGATAACCACGTACAAGTTATTTAAGTGTTCCAAAATTAGAATTTAAGGGATATTTTTAAACGGATGAAGTGAAAGAAACATACAAGATAAAGCAAAATTCTATAGCTGTCTAGCCAAATTATATTAGTATATATAATTGAATTTCTAAAATCACAATATAAGAAAGTTTATCAACGAATCTTCATCATTGTTGGCTTATCGGTGTGATGGACCAATATTTGCAATATGACTTATCAATGAAGGACTTCTATCGTTGATAGACTTTGACCAATTTTTTTATATTTACAGAATTTAAAAAATGTTACTATATCTATATACTAATAGTTTGAATCTAATTAATTGCTCTATTTTGTGGGTGTGCCAATGATAATTATAGAACTATATAAATGGAAGTATATACTCAACTGTTGATACACATACTTAAAATTGGAATAATAAAAAAATTGGAAATGAGGTTTAAATTACTTTTTTGCTATATATTTTCCCTATATATAACTTAGTTACTACTATCAATGTAGCTTTATGGATTTAATTTCTTACCCCTTTGTGGAACAAAATACATAGGTGGCCCAGCAGAGATTAAGGAGAGGTTAGCCTTTGACGATGCCAACAAATCAATAGCTTTTGAGGTGTTTGAAGGAGATCTATTCAGAGATTTTGAAGTATTCAAAATGAAAATGCAAGTTATTAATGAGAAAGGTAGCAATGGGAGCTCCGTTAATTGGTGTATAGAATTTGTGAAGGAAAATGAAGATGTGGCTGCACCACATCACTATCTCACAATTGCAGCTCAATCAAGCAAAACACTTGATGATTACCTTTGCAACAACTGAACCAAAAACTATATCCCCAACTTCACTTGACTACTCAAATATGATCTAAATAAACTGATCTCTACTAATTATCTCTATGTTTTTATGATATGTGTTTTCAAGGTTTAATGGAAGAAATAATTATGCTTCATGATGCCTTATTT

mRNA sequence

TGAGCAAGATTTGAAGCTAAACTTCAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGCAGCTCAAGTGTTCTGGTCACAAATTCTACGACTTTTTCACTAACAAAATGGACTCTGTCATTCAAATGTTTCCTCACATTGTTACAAGCTACAAAATTCTAGAAGGCAATGGTTTCGCTCATGGCAGCGTCATCCATCTAAAATATAACATAGGTGGCCCAGCAGAGATTAAGGAGAGGTTAGCCTTTGACGATGCCAACAAATCAATAGCTTTTGAGGTGTTTGAAGGAGATCTATTCAGAGATTTTGAAGTATTCAAAATGAAAATGCAAGTTATTAATGAGAAAGGTAGCAATGGGAGCTCCGTTAATTGGTGTATAGAATTTGTGAAGGAAAATGAAGATGTGGCTGCACCACATCACTATCTCACAATTGCAGCTCAATCAAGCAAAACACTTGATGATTACCTTTGCAACAACTGAACCAAAAACTATATCCCCAACTTCACTTGACTACTCAAATATGATCTAAATAAACTGATCTCTACTAATTATCTCTATGTTTTTATGATATGTGTTTTCAAGGTTTAATGGAAGAAATAATTATGCTTCATGATGCCTTATTT

Coding sequence (CDS)

GAGCAAGATTTGAAGCTAAACTTCAAAATGGCTCAGATTGCTAAGATCTCAGAGCAAGTGCAGCTCAAGTGTTCTGGTCACAAATTCTACGACTTTTTCACTAACAAAATGGACTCTGTCATTCAAATGTTTCCTCACATTGTTACAAGCTACAAAATTCTAGAAGGCAATGGTTTCGCTCATGGCAGCGTCATCCATCTAAAATATAACATAGGTGGCCCAGCAGAGATTAAGGAGAGGTTAGCCTTTGACGATGCCAACAAATCAATAGCTTTTGAGGTGTTTGAAGGAGATCTATTCAGAGATTTTGAAGTATTCAAAATGAAAATGCAAGTTATTAATGAGAAAGGTAGCAATGGGAGCTCCGTTAATTGGTGTATAGAATTTGTGAAGGAAAATGAAGATGTGGCTGCACCACATCACTATCTCACAATTGCAGCTCAATCAAGCAAAACACTTGATGATTACCTTTGCAACAACTGA

Protein sequence

EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEFVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN*

Homology

[Close]

BLAST of Cucsa.012470 vs. Swiss-Prot
Match: ML149_PAPSO (Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.9e-17
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 1


Query: 13  IAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY-NI 72
           + K+  + ++ C+  K+Y  + +  D +    PHIVTS K +EG+G   G V    Y + 
Sbjct: 11  VGKLVMETEVNCNADKYYQIYKHHED-LPSAIPHIVTSAKAVEGHGTTSGCVKEWGYMHE 70

Query: 73  GGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEFVK 132
           G     KE+  ++D  ++I   + EGDL  D++ F   + V  +   +GS V + +++ K
Sbjct: 71  GKTLTCKEKTTYNDETRTICHSISEGDLMNDYKKFDATLVVDPKDNGHGSIVKYILDYEK 130

Query: 133 ENEDVAAPHHYLTIAAQSSKTLDDYLC 159
            NED   P HYL +  Q+++ L+ YLC
Sbjct: 131 INEDSPVPIHYLALCNQATEDLNTYLC 156

[Close]

BLAST of Cucsa.012470 vs. Swiss-Prot
Match: MLP15_PAPSO (Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-15
Identity = 44/147 (29.93%), Postives = 74/147 (50.34%), Query Frame = 1


Query: 13  IAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIG 72
           + K+  + ++ C+  K+Y  F +  D +    PHI TS K +EG+G   G V    Y + 
Sbjct: 11  VGKLITESEVNCNADKYYQIFKHHED-LPSAIPHIYTSVKAVEGHGTTSGCVKEWCYILE 70

Query: 73  G-PAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEFVK 132
           G P  +KE+  ++D  ++I     EG +  D++ F   + V  +    GS V W +++ K
Sbjct: 71  GKPLTVKEKTTYNDETRTINHNGIEGGMMNDYKKFVATLVVKPKANGQGSIVTWIVDYEK 130

Query: 133 ENEDVAAPHHYLTIAAQSSKTLDDYLC 159
            NED   P  YL    Q+ + L+ +LC
Sbjct: 131 INEDSPVPFDYLAFFQQNIEDLNSHLC 156

[Close]

BLAST of Cucsa.012470 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-13
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1


Query: 15  KISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIGGP 74
           K+ +QV++   G  FY+ F  ++  + +M P  +    +LEGN    GSVI  KY I G 
Sbjct: 6   KMVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKYTIDGK 65

Query: 75  AEIKERL--AFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEFVKE 134
            +  + +  A D+  KS+ F++ EGDL   ++ F + +QV + KG + +SV W   + K 
Sbjct: 66  EKTAKDIVEAIDEETKSVTFKIVEGDLMELYKTFIIIVQV-DTKGEH-NSVTWTFHYEKL 125

Query: 135 NEDVAAPHHYLTIAAQSSKTLDDY 157
            EDV  P+  +    + +K ++ Y
Sbjct: 126 KEDVEEPNTLMNFCIEITKDIETY 147

[Close]

BLAST of Cucsa.012470 vs. Swiss-Prot
Match: ML168_ARATH (MLP-like protein 168 OS=Arabidopsis thaliana GN=MLP168 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.4e-07
Identity = 36/146 (24.66%), Postives = 67/146 (45.89%), Query Frame = 1


Query: 14  AKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIGG 73
           A++   V++K +  KF+ F  ++           V    +LEG     GS++  K  + G
Sbjct: 4   AEVEVDVEIKSTADKFFMF--SRRSQHASKATRYVQGCDLLEGEWGEVGSILLWKLTVDG 63

Query: 74  PAEIKERL--AFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEFVK 133
             ++ + +  A D     I + V EG L  ++ +F   M+V  ++G +GS V W +++ +
Sbjct: 64  EPKVSKDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGSGSVVKWNLKYER 123

Query: 134 ENEDVAAPHHYLTIAAQSSKTLDDYL 158
            +E VA     L    +    +D YL
Sbjct: 124 IDEKVAHLERLLQFFVECVNEIDQYL 147

[Close]

BLAST of Cucsa.012470 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.4e-85
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1


Query: 1   EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFA 60
           EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFA
Sbjct: 6   EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFA 65

Query: 61  HGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG 120
           HGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG
Sbjct: 66  HGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG 125

Query: 121 SSVNWCIEFVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           SSVNW IEFVKENEDVAAPHHYLTIAAQ+SKTLDDYLCNN
Sbjct: 126 SSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 165

[Close]

BLAST of Cucsa.012470 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.2e-72
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 69
           MAQIAKISEQ+QLK S HKFYDFFTNKMDS+IQMFPHI TSYKILEGNGFAH SVIH+KY
Sbjct: 1   MAQIAKISEQLQLKSSAHKFYDFFTNKMDSLIQMFPHIFTSYKILEGNGFAHASVIHIKY 60

Query: 70  NIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEF 129
           NIGGPAE+KERLAFDDANKSIAFEVFEGDL RDFEVFKMKMQV NEKGSNGS VNW IEF
Sbjct: 61  NIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEF 120

Query: 130 VKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           VK NEDVAAPH YLTIAAQ+SKTLDDYLCNN
Sbjct: 121 VKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 151

[Close]

BLAST of Cucsa.012470 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.5e-50
Identity = 100/152 (65.79%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSV-IQMFPHIVTSYKILEGNGFAHGSVIHLK 69
           MAQI +ISEQV +K S HKFY FF NKMD V +QMFP I  S K++EGNGF+ GS+IHLK
Sbjct: 1   MAQICEISEQVNIKSSAHKFYQFFKNKMDYVFVQMFPEIYKSCKVVEGNGFSDGSIIHLK 60

Query: 70  YNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIE 129
           +N G P E+KERLA DDANKSI FE  EGD  R+FEV K+K QV+ E G+NG +VNW IE
Sbjct: 61  FNAGKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVL-ENGNNGGTVNWSIE 120

Query: 130 FVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           FVK NEDVA+PHHYL    + +K LDDYLCNN
Sbjct: 121 FVKANEDVASPHHYLLCVTKVAKGLDDYLCNN 151

[Close]

BLAST of Cucsa.012470 vs. TrEMBL
Match: A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37
Identity = 81/154 (52.60%), Postives = 110/154 (71.43%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 69
           MAQIAKIS+QVQLKC G KFYDFF NKMD + ++FP    SYK++EGN   HGSV   KY
Sbjct: 1   MAQIAKISDQVQLKCCGKKFYDFFKNKMDHLPRVFPQYFESYKLVEGNSLTHGSVSFWKY 60

Query: 70  NIG--GPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG-SSVNWC 129
           + G     E+K ++  D+ NK+I +E  EGDLF+DF++F +K++V N+ G+NG SSVNWC
Sbjct: 61  DFGFGSSIEVKMKVLVDEPNKTIIYECLEGDLFKDFDIFNVKIKV-NDGGNNGNSSVNWC 120

Query: 130 IEFVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           +E+VK NE+V  P++YL    +  K +D +L NN
Sbjct: 121 LEYVKANENVDPPNNYLQFGLKLCKNVDAFLGNN 153

[Close]

BLAST of Cucsa.012470 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-36
Identity = 82/153 (53.59%), Postives = 105/153 (68.63%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFP-HIVTSYKILEGNGFAHGSVIHLK 69
           MAQI  ISE+V+LK  G KFY FF  KMD + QMFP +I  +Y+ +EGN F HG+VIH K
Sbjct: 1   MAQICSISEEVKLKACGQKFYHFFLTKMDVLNQMFPQNINCTYEFVEGNSFTHGTVIHWK 60

Query: 70  YNIGGPAE-IKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCI 129
           Y+ GG  E  K RL  D+ NKSIA E  EGD+ ++F+VFK+K+QV +      +SV WC+
Sbjct: 61  YDFGGGLEESKVRLTVDEPNKSIAMECLEGDVLKEFQVFKVKVQVKDSDVVGVNSVKWCV 120

Query: 130 EFVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           EFVK NEDVA P+++L    +  K LD YLCNN
Sbjct: 121 EFVKANEDVAPPNNHLKCGIKVCKDLDAYLCNN 153

[Close]

BLAST of Cucsa.012470 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.8e-15
Identity = 45/151 (29.80%), Postives = 80/151 (52.98%), Query Frame = 1


Query: 9   KMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLK 68
           K + + K+  +V++K     FY  +  +   V +  P  V S  + +G     GS+++  
Sbjct: 12  KSSLLGKLEVEVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWN 71

Query: 69  YNIGGPAEI-KERLAFDDANKS-IAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWC 128
           Y   G A++ KER+   +  K  I F V EGD+  +++ F + +QV  ++G  GS V W 
Sbjct: 72  YVHEGQAKVAKERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGTGSVVKWH 131

Query: 129 IEFVKENEDVAAPHHYLTIAAQSSKTLDDYL 158
           IE+ K +E+V  P + L   A+ +K +D++L
Sbjct: 132 IEYEKIDENVPHPENLLPFFAEMTKEIDEHL 162

[Close]

BLAST of Cucsa.012470 vs. TAIR10
Match: AT1G70870.1 (AT1G70870.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.6e-09
Identity = 43/149 (28.86%), Postives = 70/149 (46.98%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 69
           MAQ+AK   +V++  S    +    +K+ S++    HI    K             +   
Sbjct: 1   MAQMAKSMIEVEINVSADMIFGKSFSKLSSLLH--EHIGDGCK----------GTKNWTL 60

Query: 70  NIGGPAE-IKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIE 129
           ++ G  E +KER+  D+ANKS+   VFEGD+  ++  F   +Q+I  K    S   W  E
Sbjct: 61  SVDGKVEKMKERVEIDEANKSMTVFVFEGDVMENYSSFTCNLQII-PKLHGRSIARWSWE 120

Query: 130 FVKENEDVAAPHHYLTIAAQSSKTLDDYL 158
           + K N D  AP+ Y+  A   +K ++  L
Sbjct: 121 YEKLNADSPAPNKYMDFAVYLTKDIESNL 136

[Close]

BLAST of Cucsa.012470 vs. TAIR10
Match: AT1G35310.1 (AT1G35310.1 MLP-like protein 168)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 36/146 (24.66%), Postives = 67/146 (45.89%), Query Frame = 1


Query: 14  AKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIGG 73
           A++   V++K +  KF+ F  ++           V    +LEG     GS++  K  + G
Sbjct: 4   AEVEVDVEIKSTADKFFMF--SRRSQHASKATRYVQGCDLLEGEWGEVGSILLWKLTVDG 63

Query: 74  PAEIKERL--AFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEFVK 133
             ++ + +  A D     I + V EG L  ++ +F   M+V  ++G +GS V W +++ +
Sbjct: 64  EPKVSKDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGSGSVVKWNLKYER 123

Query: 134 ENEDVAAPHHYLTIAAQSSKTLDDYL 158
            +E VA     L    +    +D YL
Sbjct: 124 IDEKVAHLERLLQFFVECVNEIDQYL 147

[Close]

BLAST of Cucsa.012470 vs. TAIR10
Match: AT1G23120.1 (AT1G23120.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 34/149 (22.82%), Postives = 69/149 (46.31%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 69
           MA +  +  ++Q+  +  +F+  F  K  +    F     +  +   +  ++ S+    +
Sbjct: 1   MAGVQTLELEIQVNMTAERFFKTFKKKEGN----FTDKTEAVYVHRDDPTSNSSIQIWNF 60

Query: 70  NIGGPAE-IKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIE 129
            + G  E IKE++  D+ NKS++F   EGD+ + ++ +K+ + V+  K        W  E
Sbjct: 61  IVDGKMEQIKEKIDVDEENKSVSFLALEGDVLKQYKSYKITLDVV-PKDHKVCIAKWTWE 120

Query: 130 FVKENEDVAAPHHYLTIAAQSSKTLDDYL 158
           + K N+DV  P  Y       ++ L+  L
Sbjct: 121 YEKLNDDVPPPTRYTAFVEDYTRDLETRL 144

[Close]

BLAST of Cucsa.012470 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 2.0e-85
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 1


Query: 1   EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFA 60
           EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFA
Sbjct: 6   EQDLKLNFKMAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFA 65

Query: 61  HGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG 120
           HGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG
Sbjct: 66  HGSVIHLKYNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNG 125

Query: 121 SSVNWCIEFVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           SSVNW IEFVKENEDVAAPHHYLTIAAQ+SKTLDDYLCNN
Sbjct: 126 SSVNWSIEFVKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 165

[Close]

BLAST of Cucsa.012470 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 4.4e-80
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 69
           MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY
Sbjct: 1   MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 60

Query: 70  NIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEF 129
           NIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNW IEF
Sbjct: 61  NIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWSIEF 120

Query: 130 VKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           VKENEDVAAPHHYLTIAAQ+SKTLDDYLCNN
Sbjct: 121 VKENEDVAAPHHYLTIAAQTSKTLDDYLCNN 151

[Close]

BLAST of Cucsa.012470 vs. NCBI nr
Match: gi|778680249|ref|XP_011651277.1| (PREDICTED: major latex protein 146-like [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 7.5e-72
Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKY 69
           MAQIAKISEQ+QLK S HKFYDFFTNKMDS+IQMFPHI TSYKILEGNGFAH SVIH+KY
Sbjct: 1   MAQIAKISEQLQLKSSAHKFYDFFTNKMDSLIQMFPHIFTSYKILEGNGFAHASVIHIKY 60

Query: 70  NIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIEF 129
           NIGGPAE+KERLAFDDANKSIAFEVFEGDL RDFEVFKMKMQV NEKGSNGS VNW IEF
Sbjct: 61  NIGGPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEF 120

Query: 130 VKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           VK NEDVAAPH YLTIAAQ+SKTLDDYLCNN
Sbjct: 121 VKANEDVAAPHQYLTIAAQTSKTLDDYLCNN 151

[Close]

BLAST of Cucsa.012470 vs. NCBI nr
Match: gi|659114440|ref|XP_008457055.1| (PREDICTED: MLP-like protein 34 [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 102/152 (67.11%), Postives = 118/152 (77.63%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSV-IQMFPHIVTSYKILEGNGFAHGSVIHLK 69
           MAQI KISEQV +K S HK+Y FF NKMD V +QMFP I  S K++EGNG++HGS+IHLK
Sbjct: 1   MAQICKISEQVNIKSSAHKYYQFFKNKMDYVLVQMFPEIYKSCKVVEGNGYSHGSIIHLK 60

Query: 70  YNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIE 129
           YN G P E+KERLA DDANKSI FE  EGD  RDFEV K+K QV  E G+NG +VNW IE
Sbjct: 61  YNAGRPEEMKERLAIDDANKSITFECLEGDALRDFEVLKLKFQVF-ENGNNGGTVNWSIE 120

Query: 130 FVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           FVK NEDVA+PHHYL   ++ +K LDDYLCNN
Sbjct: 121 FVKANEDVASPHHYLLCVSKVAKGLDDYLCNN 151

[Close]

BLAST of Cucsa.012470 vs. NCBI nr
Match: gi|449464138|ref|XP_004149786.1| (PREDICTED: kirola [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-49
Identity = 100/152 (65.79%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 10  MAQIAKISEQVQLKCSGHKFYDFFTNKMDSV-IQMFPHIVTSYKILEGNGFAHGSVIHLK 69
           MAQI +ISEQV +K S HKFY FF NKMD V +QMFP I  S K++EGNGF+ GS+IHLK
Sbjct: 1   MAQICEISEQVNIKSSAHKFYQFFKNKMDYVFVQMFPEIYKSCKVVEGNGFSDGSIIHLK 60

Query: 70  YNIGGPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWCIE 129
           +N G P E+KERLA DDANKSI FE  EGD  R+FEV K+K QV+ E G+NG +VNW IE
Sbjct: 61  FNAGKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVL-ENGNNGGTVNWSIE 120

Query: 130 FVKENEDVAAPHHYLTIAAQSSKTLDDYLCNN 161
           FVK NEDVA+PHHYL    + +K LDDYLCNN
Sbjct: 121 FVKANEDVASPHHYLLCVTKVAKGLDDYLCNN 151

The following BLAST results are available for this feature:

BLAST of Cucsa.012470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ML149_PAPSO	6.9e-17	31.29	Major latex protein 149 OS=Papaver somniferum GN=MLP149 PE=2 SV=1	[more]
MLP15_PAPSO	2.9e-15	29.93	Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2	[more]
KIRO_ACTDE	3.5e-13	31.25	Kirola OS=Actinidia deliciosa PE=1 SV=1	[more]
ML168_ARATH	6.4e-07	24.66	MLP-like protein 168 OS=Arabidopsis thaliana GN=MLP168 PE=2 SV=1	[more]

BLAST of Cucsa.012470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA22_CUCSA	1.4e-85	98.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1	[more]
A0A0A0L9D7_CUCSA	5.2e-72	90.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1	[more]
A0A0A0LCM8_CUCSA	9.5e-50	65.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1	[more]
A0A0A0L7N6_CUCSA	1.9e-37	52.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1	[more]
A0A0A0L771_CUCSA	2.7e-36	53.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1	[more]

BLAST of Cucsa.012470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28010.1	6.8e-15	29.80	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70870.1	5.6e-09	28.86	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G35310.1	3.6e-08	24.66	MLP-like protein 168	[more]
AT1G23120.1	1.1e-07	22.82	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

BLAST of Cucsa.012470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202691\|gb\|KGN57824.1\|	2.0e-85	98.75	hypothetical protein Csa_3G331340 [Cucumis sativus]	[more]
gi\|778680829\|ref\|XP_004151203.2\|	4.4e-80	98.68	PREDICTED: major latex protein 149-like [Cucumis sativus]	[more]
gi\|778680249\|ref\|XP_011651277.1\|	7.5e-72	90.07	PREDICTED: major latex protein 146-like [Cucumis sativus]	[more]
gi\|659114440\|ref\|XP_008457055.1\|	2.5e-51	67.11	PREDICTED: MLP-like protein 34 [Cucumis melo]	[more]
gi\|449464138\|ref\|XP_004149786.1\|	1.4e-49	65.79	PREDICTED: kirola [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000916	Bet_v_I/MLP
IPR023393	START-like_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0006952	defense response
GO:0009607	response to biotic stimulus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.012470.1	Cucsa.012470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 14..159 score: 7.2
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 11..160 score: 6.7
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 7..160 score: 5.3
None	No IPR available	PANTHER	PTHR31907	FAMILY NOT NAMED	coord: 11..160 score: 7.9
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 10..44 score: 4.71E-25coord: 77..159 score: 4.71

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.012470	Cla013183	Watermelon (97103) v1	cgywmB367
Cucsa.012470	CmaCh14G008410	Cucurbita maxima (Rimu)	cgycmaB0548
Cucsa.012470	CsaV3_3G021460	Cucumber (Chinese Long) v3	cgycucB303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.012470	Silver-seed gourd	carcgyB0859
Cucsa.012470	Watermelon (97103) v2	cgywmbB351
Cucsa.012470	Wax gourd	cgywgoB393
Cucsa.012470	Cucurbita moschata (Rifu)	cgycmoB0549
Cucsa.012470	Wild cucumber (PI 183967)	cgycpiB299
Cucsa.012470	Cucumber (Chinese Long) v2	cgycuB290
Cucsa.012470	Watermelon (Charleston Gray)	cgywcgB345
Cucsa.012470	Cucurbita pepo (Zucchini)	cgycpeB0531
Cucsa.012470	Cucurbita pepo (Zucchini)	cgycpeB0532
Cucsa.012470	Bottle gourd (USVL1VR-Ls)	cgylsiB322
Cucsa.012470	Melon (DHL92) v3.6.1	cgymedB338