CsaV3_3G021460 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAGATATGTGAGATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACAAGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTTGTGGAAGGGAATGGTTTTTCTGATGGCAGCATCATCCACCTAAAATTTAACGCAGGTGAGGATCTGTATCAAAACCATCATTTCAATTTTTTTCGATTTTGGTTCAGTTATACTTTTAAATATTCTATATTTTAACATTTCGACTTTTTTCTTCTGACCAAAATTACCTTTGAGAAATCAATATTATTTATTTATTATTTCAAAAAGCTATTTAAGAAACACTACTCTTACCTTCTAAATCTTTTTCTTTTATTATCTACTTCTCTACCCATGTTTTAAAAATCAAGGGAGCTAGTTTCTAGAAACAAAAATAAAATGAATTTTAAAAGTTTGCTTTTGTTTCACGAATTTGGTTAATAATTCAAACTTTTTTAATAAAAAGATTATCAAGCCTAAAATCCAAACGCAAGAACAAAAGGCCAAATAAGTCTTATCAAATCGAGCCTAAAAGGTTCTGGGTTTGTTACGCAACCTCCTTAACATCATATTCTTCCTCACTTTATATCAATACAATTGATGCGTCAGGTTATGTCAGTTGTACATATACACCTTTATTGTATTTTGCGAGCTCCTGGGATTTACTTAGCAACAATTCTTACACTCTTTTTGTTTTTTTTTTTTCCTTGTTTTGGATGAAATTACTTAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAAATTTTGAAGTGCTTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAAGATGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA ATGGCTCAGATATGTGAGATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACAAGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTTGTGGAAGGGAATGGTTTTTCTGATGGCAGCATCATCCACCTAAAATTTAACGCAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAAATTTTGAAGTGCTTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAAGATGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA ATGGCTCAGATATGTGAGATCTCAGAGCAAGTGAATATCAAGTCTTCTGCTCACAAGTTCTATCAGTTTTTCAAGAACAAAATGGATTATGTTTTTGTTCAAATGTTCCCTGAAATTTATAAGAGTTGTAAGGTTGTGGAAGGGAATGGTTTTTCTGATGGCAGCATCATCCACCTAAAATTTAACGCAGGAAAACCAGAAGAGGTGAAAGAGAGGCTAGCTATTGATGATGCCAACAAATCAATAACTTTTGAGTGCCTTGAAGGAGATCCATTAAGAAATTTTGAAGTGCTTAAATTAAAATTTCAAGTTCTTGAGAATGGTAACAATGGAGGAACAGTTAATTGGTCTATAGAGTTTGTGAAGGCAAATGAAGATGTGGCTTCACCACATCACTATCTCCTATGTGTAACTAAAGTTGCCAAAGGCCTTGATGACTACCTTTGCAACAACTGA MAQICEISEQVNIKSSAHKFYQFFKNKMDYVFVQMFPEIYKSCKVVEGNGFSDGSIIHLKFNAGKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVLENGNNGGTVNWSIEFVKANEDVASPHHYLLCVTKVAKGLDDYLCNN
BLAST of CsaV3_3G021460 vs. NCBI nr
Match: XP_004149786.1 (PREDICTED: kirola [Cucumis sativus] >KGN57826.1 hypothetical protein Csa_3G333840 [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 4.5e-83 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. NCBI nr
Match: XP_008457055.1 (PREDICTED: major latex protein 149-like [Cucumis melo]) HSP 1 Score: 296.2 bits (757), Expect = 6.3e-77 Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. NCBI nr
Match: XP_023528288.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 233.4 bits (594), Expect = 5.1e-58 Identity = 107/151 (70.86%), Postives = 131/151 (86.75%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. NCBI nr
Match: XP_022935144.1 (kirola-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56 Identity = 105/151 (69.54%), Postives = 132/151 (87.42%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. NCBI nr
Match: XP_022935319.1 (kirola-like [Cucurbita moschata]) HSP 1 Score: 222.6 bits (566), Expect = 8.9e-55 Identity = 101/151 (66.89%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TAIR10
Match: AT5G28000.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 71.6 bits (174), Expect = 4.6e-13 Identity = 42/146 (28.77%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TAIR10
Match: AT1G23120.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12 Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TAIR10
Match: AT5G28010.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12 Identity = 40/146 (27.40%), Postives = 76/146 (52.05%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TAIR10
Match: AT1G24020.1 (MLP-like protein 423) HSP 1 Score: 67.8 bits (164), Expect = 6.7e-12 Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TAIR10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 64.7 bits (156), Expect = 5.6e-11 Identity = 40/149 (26.85%), Postives = 73/149 (48.99%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. Swiss-Prot
Match: sp|Q06394|ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 9.8e-13 Identity = 41/139 (29.50%), Postives = 69/139 (49.64%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. Swiss-Prot
Match: sp|P19825|MLP15_PAPSO (Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 6.4e-12 Identity = 42/139 (30.22%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. Swiss-Prot
Match: sp|P85524|KIRO_ACTDE (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11 Identity = 42/141 (29.79%), Postives = 76/141 (53.90%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. Swiss-Prot
Match: sp|Q06395|ML149_PAPSO (Major latex protein 149 OS=Papaver somniferum OX=3469 GN=MLP149 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.1e-11 Identity = 40/142 (28.17%), Postives = 67/142 (47.18%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. Swiss-Prot
Match: sp|Q93VR4|ML423_ARATH (MLP-like protein 423 OS=Arabidopsis thaliana OX=3702 GN=MLP423 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10 Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TrEMBL
Match: tr|A0A0A0LCM8|A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G333840 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 3.0e-83 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TrEMBL
Match: tr|A0A1S3C4L4|A0A1S3C4L4_CUCME (major latex protein 149-like OS=Cucumis melo OX=3656 GN=LOC103496825 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 4.2e-77 Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TrEMBL
Match: tr|A0A0A0LA22|A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G331340 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.3e-51 Identity = 101/152 (66.45%), Postives = 118/152 (77.63%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TrEMBL
Match: tr|A0A0A0L9D7|A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219190 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.6e-50 Identity = 100/152 (65.79%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of CsaV3_3G021460 vs. TrEMBL
Match: tr|A0A1S3C5B3|A0A1S3C5B3_CUCME (major latex protein 15-like OS=Cucumis melo OX=3656 GN=LOC103496826 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 6.6e-38 Identity = 79/149 (53.02%), Postives = 106/149 (71.14%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|