Cucsa.002270 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.002270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Reverse transcriptase
Location	scaffold00032 : 43589 .. 47500 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCATCCCTGCAGGTAGAGGAATCCACGGAGGCTCCTGTAGAGGAATCCAAAGTTGAAGAGGGTCAAGAAAAGAAGGAAGAAACAGTAGTGGCAACTGAATCAGAAGAAAAAGAAGAAGCGGTGCCCGAAGCCGAAGAAAGTGCAAAGGTTGAGGAGTCTCCAGCAGCCGAGGTCGAGGCGGAGGCCAAACCTCAGGTGGAAGAAGAGAAAGCAATTGAAGAAGAGAAACCGACTGAGGTAGCAGAAGAGAAGAGCCAAGAATAGAGATCACATGAAAAGAGTTACTATGGAAGAGTGGTGGGGTGCAATATTAATTTATGATCTCAGCTTTGTGGGACAACTAGTTTAATTTAATTATGTGCTGTTTTTTtCCTATTTCTAAAATAGAAACTTGATTTTCTATTGGTTTATTGAGTGAAAATATTTGAATTATATTATGAAAGTTAATGATGTATTATGGAGTATAGTTGAAGGATTTGAACTACTATATATATGGGAGGTGAAGAAGATGTTTGATCTCAACTTAGAATTTGATAAATATTGGTGTGTGAAGAGTGCTCTACCTCAAGTTTTTCTAGTGGAATTTATGCAGTTTATTATTTGTTTTCTATGTACTAATTATTAGGATTTCTAAAGTTAAAATATTGTAACATTGGAATGAGAGAAAATTTATTGGATATTGAAAAATGAATTGTTCTCAAGTATTGTGACAACAAAATAACATGTATGGGAAGATGACCTTGAGATGTGATCAAGTACACCGAGTGTGCTAAATGAATTATTTTATGGTTACTAAACTTCTATTCTTTAGGAAGGAAGAGGAAGACATATTATATGTAAGAGATCGGCACTCCTCTTTAGGGATTTAAGTGGGTGTGTTAGATAAGGACCACATTAACTCATCTCTTCTAAGCAAGAAATATGAGACCGATCATGTACTCCCTCAAGAGATGTTTAAGAAGAATAAAAAAGAAGGTAAATATGATTTACTTGTCTTAGAAACATGTTTAGTGAAAAATAACCAAAATGCTTGGATAATTGATTCAAGAGCCACTAACCATGTTTTCTCTTCTTTATAGGAAACTAGTTCCTTTAAGCGGCTCAAGGAGGATGAGATGACACTCAAGGTTGAAACGAAAGATGTCATTCCAGCTCGTGCAGTGAGAGATGCTAAGTTGTCTTTCAAAAATATATTCATGTTTTTAGAAAACTCGTATATAGTTCCTAAGATTAAAAGAAATCTTATATCTATTTCTTATCTTATTGAACAATCATATAATGTAACATTTTCTTTAAATGAAGCATTCAATTCTAAGAATGGTGTACATATTTGGTCAGCTAAACTTGAAGACAACTTGTATGTATTAAGATCTAACGAAGCGAAAGCAATTTTAAATCATGAGATGTTTAAAACTGCTAATACTCACATAAAAGACAAACAATTTCTCCTAATAACAATAATATCTTTGACATTTAAGACTAGGTCACATTCATCTCGATAGGATCGAGAGATTGGTAAAGAATGGAATTCTAAATGAGTTAGAAGATGATTAATTACCTCCAAGTGATTTTTttCTTGAAGGAAAGATGACTAAAAGACCTTTTACTGAAAAAGGTTATAGAGCCAAAGAGTTCCTAGAACTTATACATTTAGACCTTCTGTGGTCCGATAAATGTAAAAGCTAGAGGAGGTTTTGAATACTTCATCTATTTTATAGATGATTATTCAAGGTATAGTTATTTATATTTAATGGGGGCATAAGTCTAAAACTCTTGAAAAGTTCAAGGAGTATAAGGTTGAAGTTGAAAATTTGTTAAGTAAAAAGATTTAAAATACTTCAATTTGATCGAGGTGGAGAGTACATGGATTTGAGATTCTAGGACTATATGATAGAACATGAAATCCAATCCTAACTCTCAGCACCTGTTACACCTCAACAAAATAGTGTATCAAAAAGGAGAAATAGAACATTGTTAGACATGGTTCGTTCAATGAGCTATGCTCAATTGCCTAGCTCGTTTTAGAGGCATGCAGTAGCGACTGCAATTGATATCTTGAACAATGTTCCCTTAAAGAGTGTTTCTAAAACACCTTTCTAGTTATGAAGAGAACGTAAACCTAGTTTAAGTTACTTCAGAATTTTTTGGGTTGTCCAACACACGTGTTAGTGACAAATCACAAAAAGTTGGAATCCTGTTCAAGGTTATGCAATAAAGAAATGAGAGGTGGTTTATTCTTCAATCCATAAGAAAACAGAGTATTTGTATCGATAAATGTTACTTTCTTGAAAAAAGACCACATGAGAGAGCATAAACCGCGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCAACACATAAGGTCAGTCTCATCCTTCTCAATCCTTGAGAATGCCTTGACGCAGTGGGAGGATTGTATCACAACCTAACCGTTGGGTTTAACTGAAACTCAAGTTGGCATACCAAATGATGGCGTTCACGATCTATTGTCCTATAAACAGACAATGAATAGTGTAGACAAGAACTAATGGGTCAAAGTCATGGGCCTTGAAATGAAGTCCATGTACTTCAATTCAGTGTGAGAGCTTGTAGATCTATCTGAAGGGGTGAAACCTATAGGGTGCAAATGGATTTATAAGAGAAAGAGAGATTCAGTTAGGAAGGTACAAACCTACAAAGCTAGACTTGTAGCAAAATGGTATATATAAAGGGAAGGGATTGGCTATGAGAAAACTTTTTCCCTtGTTTCTATGTGAAAGTCTAAGGATTTTTTtGTCCATAGCCACTTTTTATGAAAATGAATGTCAAGACTGCTTTTTCTGAATGACAATCTTGAAGAAAGTATCTTTACTTCTCAACCTGAGGGGTTCATAGCCCATGGTTAGGAGCAAAAAGTTTGCAAGTTGAAGCGATCCATTTATGGTTTGAAACAATCATCTAGATCTTGGAATATTAGATTTGATACTGCAATCAAATCTTATGGTTTTGACCAAAACGTTGACGAACCTTGTGTATACAAGAAAATCAACAAGGTAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTTATCATTGAAAATGATGTAGGATACCTAATTAACGTTAAAACTTGGCTAGCAACTTAGTCCCAAATAAAATATTTGGAAGAGGCATAATATGTTCTTGGGGTCCAAATCATAAGGGATCGTAAGTTGAATCCCAAGAACAAAACGCTAGCAATATCTTAAGTAATCTATATCGATAAAATGTTGGTTCGATATTCGATGTAGGACTCTAAGAAGGGTTTATTACATTTCAAGCACGGGGCTCATTTGTTTAAGAAACAATGTCCTAAGACAACTCAAGAAGTTAAGGATATGAGACATTCCTTATGCCTTAGCTATAGGGAGCTTAATGTGTGTTATGCTCTGCACTAGGCTAGACATTTATTTTGCACTGGAAGTCAGTAGATATCAGTCCAACCTAGGGTTAGACTACTGGACTACGGTTAATATTATTCTTAAGTATCTAAGGAGAACGGGAGATTACATGCTTGTGTATGGAGCTAAGGATTTTATCCTTATAGGATACACTGACTCTGATTTCTAAACCGATAAGGATTCTAGGAAATTCACGTCGGGATCAGTGTTCACTCTAATGAGGGAGTTGTGGTATGGTGTAACATCAAGCAAGAATGCATTACAAACTCTACTGTGGAGGCTGAGTACGTTGTTCCAAAAGTTGTTCCAAACTTGAACTCTACAAACTCTATAGCGAAGCAACAAAAGAAACAGATTAGCTCAGAAGTTGTTCCAAACATGAACATGCCCATCACTTTATATTGTGATAACAGTGGGGCATATTGCTGA

mRNA sequence

ATGGTTTCATCCCTGCAGGTAGAGGAATCCACGGAGGCTCCTGTAGAGGAATCCAAAGTTGAAGAGGGTCAAGAAAAGAAGGAAGAAACAGTAGTGGCAACTGAATCAGAAGAAAAAGAAGAAGCGGTGCCCGAAGCCGAAGAAAGTGCAAAGGTTGAGGAGTCTCCAGCAGCCGAGGTCGAGGCGGAGGCCAAACCTCAGGTGGAAGAAGAGAAAGCAATTGAAGAAGAGAAACCGACTGAGgagcaaaaagtttgcaagttgaagcgatccatttatggtttgaaacaatcatctagatcttggaatattagatttgatactgcaatcaaatcttatggttttgaccaaaacgttgacgaaccttacattccttatgccttagctatagggagcttaatgtgtgttatgctctgcactaggctagacatttattttgcactggaagtcagtagatatcagtccaacctagggttagactactggactacggttaatattattcttaagtatctaaggagaacgggagattacatgcttgttgttcactctaatgagggagttgtggtatggtgtaacatcaagcaagaatgcattacaaactctactgtggaggctgagtacgttgttccaaaagttgttccaaacttgaactctacaaactctatagcgaagcaacaaaagaaacagattagctcagaagttgttccaaacatgaacatgcccatcactttatattgtgataacagtggggcatattgctga

Coding sequence (CDS)

ATGGTTTCATCCCTGCAGGTAGAGGAATCCACGGAGGCTCCTGTAGAGGAATCCAAAGTTGAAGAGGGTCAAGAAAAGAAGGAAGAAACAGTAGTGGCAACTGAATCAGAAGAAAAAGAAGAAGCGGTGCCCGAAGCCGAAGAAAGTGCAAAGGTTGAGGAGTCTCCAGCAGCCGAGGTCGAGGCGGAGGCCAAACCTCAGGTGGAAGAAGAGAAAGCAATTGAAGAAGAGAAACCGACTGAGGAGCAAAAAGTTTGCAAGTTGAAGCGATCCATTTATGGTTTGAAACAATCATCTAGATCTTGGAATATTAGATTTGATACTGCAATCAAATCTTATGGTTTTGACCAAAACGTTGACGAACCTTACATTCCTTATGCCTTAGCTATAGGGAGCTTAATGTGTGTTATGCTCTGCACTAGGCTAGACATTTATTTTGCACTGGAAGTCAGTAGATATCAGTCCAACCTAGGGTTAGACTACTGGACTACGGTTAATATTATTCTTAAGTATCTAAGGAGAACGGGAGATTACATGCTTGTTGTTCACTCTAATGAGGGAGTTGTGGTATGGTGTAACATCAAGCAAGAATGCATTACAAACTCTACTGTGGAGGCTGAGTACGTTGTTCCAAAAGTTGTTCCAAACTTGAACTCTACAAACTCTATAGCGAAGCAACAAAAGAAACAGATTAGCTCAGAAGTTGTTCCAAACATGAACATGCCCATCACTTTATATTGTGATAACAGTGGGGCATATTGCTGA

Protein sequence

MVSSLQVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAKPQVEEEKAIEEEKPTEEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYIPYALAIGSLMCVMLCTRLDIYFALEVSRYQSNLGLDYWTTVNIILKYLRRTGDYMLVVHSNEGVVVWCNIKQECITNSTVEAEYVVPKVVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGAYC*

Homology

[Close]

BLAST of Cucsa.002270 vs. Swiss-Prot
Match: ICP22_SHV21 (Transcriptional regulator ICP22 homolog OS=Saimiriine herpesvirus 2 (strain 11) GN=73 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.0e-06
Identity = 32/78 (41.03%), Postives = 42/78 (53.85%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKKEETVVA---TESEEKEEAVPEAEESAKVEESPAAEVEAEA 67
           EE+ E   EE + EE +E+ EE        E EE EE   E EE+ + EE  A E E EA
Sbjct: 99  EEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEA 158

Query: 68  KPQVEEEKAIEEEKPTEE 83
           + +  EE+A EE +  EE
Sbjct: 159 EEEEAEEEAEEEAEEAEE 176

HSP 2 Score: 53.5 bits (127), Expect = 3.9e-06
Identity = 32/80 (40.00%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKKEETVVATESE----EKEEAVPEAEESAKVEESPAAEVEAE 67
           EE+ EA  EE + EE + ++EE   A E E    E+E    EAEE A+ E   A E E E
Sbjct: 121 EEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEE 180

Query: 68  AKPQVEEEKAIEEEKPTEEQ 84
           A+ + EE +  EE +  EE+
Sbjct: 181 AEEEAEEAEEAEEAEEAEEE 200

HSP 3 Score: 52.8 bits (125), Expect = 6.6e-06
Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 1


Query: 6   QVEESTEAPVEESKV--EEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAE 65
           + EE  E   EE++   EE +E+ EE   A E+EE EE   EAEE A+  E  A E E  
Sbjct: 162 EAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEA 221

Query: 66  AKPQVEEEKAIEEEKPTEE 83
            + +  EE+A E E+  EE
Sbjct: 222 EEAEEAEEEAEEAEEEEEE 240

HSP 4 Score: 52.8 bits (125), Expect = 6.6e-06
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAKPQ 67
           EE+ EA  EE + EE +E+ EE     E+EE+ E   EAEE A+ E   A E E   + +
Sbjct: 141 EEAEEA--EEEEAEEAEEEAEEEEAEEEAEEEAEEAEEAEEEAEEEAEEAEEAEEAEEAE 200

Query: 68  VEEEKAIEEEKPTEEQ 84
            E E+A EE +  EE+
Sbjct: 201 EEAEEAEEEAEEAEEE 214

HSP 5 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 32/77 (41.56%), Postives = 43/77 (55.84%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEES-AKVEESPAAEVEAEAKP 67
           EE  E   EE++ EE +E + E   A E E +EE   EAEE  A+  E  A E EAE + 
Sbjct: 108 EEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEEAEEEAEEEEAEEEA 167

Query: 68  QVEEEKAIEEEKPTEEQ 84
           + E E+A E E+  EE+
Sbjct: 168 EEEAEEAEEAEEEAEEE 184

HSP 6 Score: 50.4 bits (119), Expect = 3.3e-05
Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAE---- 67
           EE  E   EE++ EE +E+ EE     E E +EEA  EAEE+ + EE+  AE EAE    
Sbjct: 148 EEEAEEAEEEAEEEEAEEEAEEEAEEAE-EAEEEAEEEAEEAEEAEEAEEAEEEAEEAEE 207

Query: 68  ----AKPQVEEEKAIEEEKPTEEQ 84
               A+ + EE +  EE +  EE+
Sbjct: 208 EAEEAEEEAEEAEEAEEAEEAEEE 230

HSP 7 Score: 43.5 bits (101), Expect = 4.0e-03
Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1


Query: 9   ESTEAPVEESKVEEGQEKKE--ETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAKP 68
           E  E   EE +  EG E+ E  E     E+EEKE    EAEE+ +  E   AE EAEA+ 
Sbjct: 72  EERERRGEEEREGEGGEEGEGREEAEEEEAEEKEAEEEEAEEAEEEAEEEEAE-EAEAEE 131

Query: 69  QVEEEKAIEEEKPTEEQK 85
           +  EE+  EEE+  E ++
Sbjct: 132 EEAEEEEAEEEEAEEAEE 148

HSP 8 Score: 42.7 bits (99), Expect = 6.8e-03
Identity = 29/84 (34.52%), Postives = 43/84 (51.19%), Query Frame = 1


Query: 6   QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEA-EA 65
           + EE+ EA   E + EE +E+ EE     E  E+ E   EAEE A  EE+   E EA  +
Sbjct: 187 EAEEAEEAEEAEEEAEEAEEEAEEAEEEAEEAEEAEEAEEAEEEA--EEAEEEEEEAGPS 246

Query: 66  KPQVEEEKAIEEEKPTEEQKVCKL 89
            P++   K + ++  T+   V KL
Sbjct: 247 TPRLPHYKVVGQKPSTQPGGVPKL 268

[Close]

BLAST of Cucsa.002270 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.1e-06
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1


Query: 124  IPYALAIGSLMCVMLCTRLDIYFAL-EVSRYQSNLGLDYWTTVNIILKYLR-RTGD 178
            +PY+ A+GSLM  M+CTR DI  A+  VSR+  N G ++W  V  IL+YLR  TGD
Sbjct: 1109 VPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGD 1164

HSP 2 Score: 45.4 bits (106), Expect = 1.1e-03
Identity = 22/61 (36.07%), Postives = 38/61 (62.30%), Query Frame = 1


Query: 68  VEEEKAIEEEKPTE----EQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPY 125
           +EEE  +E+ +  E    +  VCKL +S+YGLKQ+ R W ++FD+ +KS  + +   +P 
Sbjct: 932 LEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPC 991

[Close]

BLAST of Cucsa.002270 vs. Swiss-Prot
Match: NFL_BOVIN (Neurofilament light polypeptide OS=Bos taurus GN=NEFL PE=1 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 8.6e-06
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 1


Query: 18  SKVEEGQEKKEETVVATESEEKEEAVP---EAEESAKVEESPAAEVEAEAKPQVEEEKAI 77
           S V+E Q + EET+ A ++EE ++  P   EAEE  K +E   AE EAEA+ + EEE+  
Sbjct: 446 SHVQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKEKEEAEAEAEAEAEAEAEEEEGA 505

Query: 78  EEEKPTEE 83
           +EE+  +E
Sbjct: 506 QEEEAAKE 513

HSP 2 Score: 44.3 bits (103), Expect = 2.3e-03
Identity = 28/87 (32.18%), Postives = 45/87 (51.72%), Query Frame = 1


Query: 2   VSSLQVEESTEAPVEESKVEEGQEKKEETVVATES------EEKEEAVPEAEESAKVEES 61
           + + + EE+ + P  E + EE +++KEE     E+      EE+E A  + EE+AK +  
Sbjct: 459 IEAAKAEEAKDEPPSEGEAEEEEKEKEEAEAEAEAEAEAEAEEEEGA--QEEEAAKEDAE 518

Query: 62  PAAEVEAEAKPQVEEEKAIEEEKPTEE 83
            A E E     + EE K  EEE+  +E
Sbjct: 519 EAKEEEGGEGEEAEETKEAEEEEKKDE 543

[Close]

BLAST of Cucsa.002270 vs. TrEMBL
Match: A0A0A0LTG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G187170 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 8.3e-32
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 6   QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK 65
           QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK
Sbjct: 54  QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK 113

Query: 66  PQVEEEKAIEEEKPTE 82
           PQVEEEKAIEEEKPTE
Sbjct: 114 PQVEEEKAIEEEKPTE 129

[Close]

BLAST of Cucsa.002270 vs. TrEMBL
Match: A5AUE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021035 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.1e-23
Identity = 70/160 (43.75%), Postives = 86/160 (53.75%), Query Frame = 1


Query: 124 IPYALAIGSLMCVMLCTRLDIYFALEV-SRYQSNLGLDYWTTVNIILKYLRRTGDYMLVV 183
           +PYA A+GSLM  MLCTR DI FA+ V SRYQSN GLD+W  V  ILKYLRRT +YMLV 
Sbjct: 442 VPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVY 501

Query: 184 HSNE------------------------------GVVVWCNIKQECITNSTVEAEYVVPK 243
              E                              G ++W ++KQ C+ +ST+EAEYV   
Sbjct: 502 SGRELIPIGYTDSDFQSDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAA- 561

Query: 244 VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                 +       ++     EVVPNM+ PI LYCDNSGA
Sbjct: 562 ----CEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNSGA 596

[Close]

BLAST of Cucsa.002270 vs. TrEMBL
Match: A5AUE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021035 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.1e-10
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1


Query: 81  EEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYI 125
           +EQKVCKL+RSIYGLKQ+SRSWNI F+ AIKSYGF+QN+ EP +
Sbjct: 283 QEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCV 326

HSP 2 Score: 110.5 bits (275), Expect = 3.0e-21
Identity = 70/160 (43.75%), Postives = 87/160 (54.37%), Query Frame = 1


Query: 124  IPYALAIGSLMCVMLCTRLDIYFALE-VSRYQSNLGLDYWTTVNIILKYLRR-------- 183
            IPY+ A+GSLM  MLCTR DI +++  VSRYQSN G D+WT V  ILKYLRR        
Sbjct: 1102 IPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVY 1161

Query: 184  -TGDYMLVVHS---------------------NEGVVVWCNIKQECITNSTVEAEYVVPK 243
               D +L  ++                     N G VVW ++KQ CI +ST+EAEYV   
Sbjct: 1162 GAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAA- 1221

Query: 244  VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                  +       +K     EVVPNM++PITLYCDNSGA
Sbjct: 1222 ----CEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGA 1256

[Close]

BLAST of Cucsa.002270 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.0e-14
Identity = 63/174 (36.21%), Postives = 91/174 (52.30%), Query Frame = 1


Query: 81   EEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYIPYALAIGSLMCVMLCT 140
            +EQKVCKL++SIYGLKQ+SRSWNIRFDTAIKSYGF+QNVDEP + Y   + S++  ++  
Sbjct: 943  QEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCV-YKKIVNSVVAFLILY 1002

Query: 141  RLDIYFALEVSRYQSNLGLDYWTTVNIILKYLRRTGDYMLVVHSNEGVVVWCNIKQECIT 200
              DI        Y ++  +  W      +K L     Y+L      G+ +  N K + + 
Sbjct: 1003 VDDILLIGNDVEYLTD--VKKWLNTQFQMKDLGE-AQYIL------GIQIVRNRKNKTLA 1062

Query: 201  NSTVEAEYVVPKVVPNLNSTNS------------IAKQQKKQISSEVVPNMNMP 243
             S  +A Y + KV+      NS            ++K+Q  +   EV    N+P
Sbjct: 1063 MS--QASY-IDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIP 1103

HSP 2 Score: 109.4 bits (272), Expect = 6.6e-21
Identity = 72/160 (45.00%), Postives = 83/160 (51.88%), Query Frame = 1


Query: 124  IPYALAIGSLMCVMLCTRLDIYFALE-VSRYQSNLGLDYWTTVNIILKYLRRT------- 183
            IPY+ AIGSLM  MLCTR D+ +AL  VSRYQSN G D+WT V  ILKYLRRT       
Sbjct: 1118 IPYSSAIGSLMYAMLCTRPDVCYALSIVSRYQSNPGRDHWTAVKNILKYLRRTRNMFLVY 1177

Query: 184  -GDYMLVVHS----------------------NEGVVVWCNIKQECITNSTVEAEYVVPK 243
             GD  L V                        N G V W + KQ C+ +ST EAEYV   
Sbjct: 1178 GGDKDLAVKGYTDSSFQTDKDDSKSQSGVFTLNGGAVSWRSSKQTCVADSTCEAEYVAA- 1237

Query: 244  VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                  +       +K      VVPNM++PITLYCDNSGA
Sbjct: 1238 ----CEAAKEAVWIRKFLTDLGVVPNMHLPITLYCDNSGA 1272

[Close]

BLAST of Cucsa.002270 vs. TrEMBL
Match: A0A165U314_9ROSI (Gag/pol protein OS=Momordica dioica PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-09
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1


Query: 81   EEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYIPYALAIGSLMCVML 139
            +EQK CKL+ SIYGLKQ+SRSWNIRFD  IK++GF QNVDE  + Y    GS++  ++
Sbjct: 959  QEQKACKLQGSIYGLKQASRSWNIRFDEVIKAFGFIQNVDESCV-YKKISGSVVAFLI 1015

HSP 2 Score: 101.3 bits (251), Expect = 1.8e-18
Identity = 64/160 (40.00%), Postives = 84/160 (52.50%), Query Frame = 1


Query: 124 IPYALAIGSLMCVMLCTRLDIYFALE-VSRYQSNLGLDYWTTVNIILKYLRRTGDYMLV- 183
           +PYA A+GSLM  MLCTR DI FA+  VSR+QSN G ++W  V  I+KYL+RT DYMLV 
Sbjct: 407 VPYASAVGSLMYAMLCTRPDICFAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVF 466

Query: 184 --------------VHSNE---------------GVVVWCNIKQECITNSTVEAEYVVPK 243
                           S++               G + W +IKQ  + +ST+EAEYV   
Sbjct: 467 QSENLXPIGYTDSDFQSDQDSRKSTSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAAS 526

Query: 244 VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                 +       +   +   VVP++  PITLYCDNSGA
Sbjct: 527 -----EAAKEAVWLRNFLLDLGVVPSVQSPITLYCDNSGA 561

[Close]

BLAST of Cucsa.002270 vs. TAIR10
Match: AT5G44610.1 (AT5G44610.1 microtubule-associated protein 18)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06
Identity = 32/67 (47.76%), Postives = 42/67 (62.69%), Query Frame = 1


Query: 17  ESKVEEGQEKKEETV-----VATESEEKEEAVPEAEESAKVEESPAAEVEAEAKPQVEEE 76
           E ++E  +EKKEE       V   +EEK+ AV E +++A VEE   A VE E KP VEE+
Sbjct: 63  EKEIEIVEEKKEEAKPVEVPVLAAAEEKKPAVEEEKKTAPVEEKKPA-VEEEKKPAVEEK 122

Query: 77  KAIEEEK 79
           K +EEEK
Sbjct: 123 KPVEEEK 128

HSP 2 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 40/97 (41.24%), Postives = 51/97 (52.58%), Query Frame = 1


Query: 6   QVEESTEAPVE-ESKVEEGQEKKEETVVATESE------EKEEAVP---------EAEES 65
           +VE   E  V+ E   +EG+ K EE +   E E      +KEEA P         E ++ 
Sbjct: 33  EVEVVEEVVVKTEEPAKEGETKPEEIIATGEKEIEIVEEKKEEAKPVEVPVLAAAEEKKP 92

Query: 66  AKVEESPAAEVEAEAKPQVEEEK--AIEEEKPTEEQK 85
           A  EE   A VE E KP VEEEK  A+EE+KP EE+K
Sbjct: 93  AVEEEKKTAPVE-EKKPAVEEEKKPAVEEKKPVEEEK 128

HSP 3 Score: 38.5 bits (88), Expect = 7.3e-03
Identity = 30/73 (41.10%), Postives = 36/73 (49.32%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKK----EETVVATESEEKEEAVPEAE-ESAKVEESPAAEVEA 67
           EE   APVEE K    +EKK    E+  V  E +E   AVP AE  S K  E+P  E  A
Sbjct: 96  EEKKTAPVEEKKPAVEEEKKPAVEEKKPVEEEKKEVVAAVPVAETPSTKAPETPVVETPA 155

Query: 68  EA--KPQVEEEKA 74
           +A   P    +KA
Sbjct: 156 KAPETPAAAPQKA 168

[Close]

BLAST of Cucsa.002270 vs. TAIR10
Match: AT1G72150.1 (AT1G72150.1 PATELLIN 1)

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 1


Query: 2   VSSLQVEESTEAPVEESKVEEG--QEKKEETVVATESEEKEEAVPEAEESAKVEESPAAE 61
           V+ ++ E++ E   EE   EE   +EKKEET    + EE++ AVP AEE    E +P  E
Sbjct: 117 VTPVKEEKTEEKKTEEETKEEEKTEEKKEETTTEVKVEEEKPAVPAAEEEKSSEAAP-VE 176

Query: 62  VEAEAKPQVEEEKAIEEEKPTEE 83
            ++E KP+ + E   E+    EE
Sbjct: 177 TKSEEKPEEKAEVTTEKASSAEE 198

HSP 2 Score: 38.1 bits (87), Expect = 9.5e-03
Identity = 29/75 (38.67%), Postives = 37/75 (49.33%), Query Frame = 1


Query: 8   EESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVP-EAEESAKVEESPAAEVEAEAKP 67
           EE TE   EE+  E   E+++  V A E E+  EA P E +   K EE   AEV  E   
Sbjct: 137 EEKTEEKKEETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPEEK--AEVTTEKAS 196

Query: 68  QVEEE-----KAIEE 77
             EE+     +AIEE
Sbjct: 197 SAEEDGTKTVEAIEE 209

HSP 3 Score: 33.9 bits (76), Expect = 1.8e-01
Identity = 26/86 (30.23%), Postives = 41/86 (47.67%), Query Frame = 1


Query: 6  QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK 65
          +V++S +        E+    KE T+    +E++E A P ++E A  E+    E EA   
Sbjct: 5  EVQKSADVAAAPVVKEKPITDKEVTIPTPVAEKEEVAAPVSDEKAVPEKEVTPEKEA--- 64

Query: 66 PQVEEEKAI---EEEKPTEEQKVCKL 89
          P  E EK++   EEE     +KV  L
Sbjct: 65 PAAEAEKSVSVKEEETVVVAEKVVVL 87

[Close]

BLAST of Cucsa.002270 vs. TAIR10
Match: AT1G62480.1 (AT1G62480.1 Vacuolar calcium-binding protein-related)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1


Query: 7   VEESTEAPVEESKVEEGQEKKE---ETVVATESEEKEEAVPEAEESAKVEESPAAE---- 66
           +EE+ EA VE  +V E ++ +E   ET V  E E K E V EA++  +VEE    E    
Sbjct: 64  IEETEEAQVETPEVVEIKKDEEAPVETPVVVEDESKTEEVVEAKKEEEVEEKKTEEAPVV 123

Query: 67  VEAEAKPQVEEEKAIEEEKPT 81
           VE E KP+ EEEK   E   T
Sbjct: 124 VEEEKKPEAEEEKPAVEASVT 144

[Close]

BLAST of Cucsa.002270 vs. NCBI nr
Match: gi|449443564|ref|XP_004139547.1| (PREDICTED: protein TsetseEP-like [Cucumis sativus])

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1


Query: 6   QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK 65
           QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK
Sbjct: 54  QVEESTEAPVEESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEAEAK 113

Query: 66  PQVEEEKAIEEEKPTE 82
           PQVEEEKAIEEEKPTE
Sbjct: 114 PQVEEEKAIEEEKPTE 129

[Close]

BLAST of Cucsa.002270 vs. NCBI nr
Match: gi|147768021|emb|CAN69397.1| (hypothetical protein VITISV_021035 [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 5.9e-23
Identity = 70/160 (43.75%), Postives = 86/160 (53.75%), Query Frame = 1


Query: 124 IPYALAIGSLMCVMLCTRLDIYFALEV-SRYQSNLGLDYWTTVNIILKYLRRTGDYMLVV 183
           +PYA A+GSLM  MLCTR DI FA+ V SRYQSN GLD+W  V  ILKYLRRT +YMLV 
Sbjct: 442 VPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVY 501

Query: 184 HSNE------------------------------GVVVWCNIKQECITNSTVEAEYVVPK 243
              E                              G ++W ++KQ C+ +ST+EAEYV   
Sbjct: 502 SGRELIPIGYTDSDFQSDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAA- 561

Query: 244 VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                 +       ++     EVVPNM+ PI LYCDNSGA
Sbjct: 562 ----CEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNSGA 596

[Close]

BLAST of Cucsa.002270 vs. NCBI nr
Match: gi|147768021|emb|CAN69397.1| (hypothetical protein VITISV_021035 [Vitis vinifera])

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10
Identity = 33/44 (75.00%), Postives = 40/44 (90.91%), Query Frame = 1


Query: 81  EEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYI 125
           +EQKVCKL+RSIYGLKQ+SRSWNI F+ AIKSYGF+QN+ EP +
Sbjct: 283 QEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEPCV 326

HSP 2 Score: 110.5 bits (275), Expect = 4.3e-21
Identity = 70/160 (43.75%), Postives = 87/160 (54.37%), Query Frame = 1


Query: 124  IPYALAIGSLMCVMLCTRLDIYFALE-VSRYQSNLGLDYWTTVNIILKYLRR-------- 183
            IPY+ A+GSLM  MLCTR DI +++  VSRYQSN G D+WT V  ILKYLRR        
Sbjct: 1102 IPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVY 1161

Query: 184  -TGDYMLVVHS---------------------NEGVVVWCNIKQECITNSTVEAEYVVPK 243
               D +L  ++                     N G VVW ++KQ CI +ST+EAEYV   
Sbjct: 1162 GAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAA- 1221

Query: 244  VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                  +       +K     EVVPNM++PITLYCDNSGA
Sbjct: 1222 ----CEAAKEAVWLRKFLTDLEVVPNMHLPITLYCDNSGA 1256

[Close]

BLAST of Cucsa.002270 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica])

HSP 1 Score: 86.3 bits (212), Expect = 8.6e-14
Identity = 63/174 (36.21%), Postives = 91/174 (52.30%), Query Frame = 1


Query: 81   EEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYIPYALAIGSLMCVMLCT 140
            +EQKVCKL++SIYGLKQ+SRSWNIRFDTAIKSYGF+QNVDEP + Y   + S++  ++  
Sbjct: 943  QEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCV-YKKIVNSVVAFLILY 1002

Query: 141  RLDIYFALEVSRYQSNLGLDYWTTVNIILKYLRRTGDYMLVVHSNEGVVVWCNIKQECIT 200
              DI        Y ++  +  W      +K L     Y+L      G+ +  N K + + 
Sbjct: 1003 VDDILLIGNDVEYLTD--VKKWLNTQFQMKDLGE-AQYIL------GIQIVRNRKNKTLA 1062

Query: 201  NSTVEAEYVVPKVVPNLNSTNS------------IAKQQKKQISSEVVPNMNMP 243
             S  +A Y + KV+      NS            ++K+Q  +   EV    N+P
Sbjct: 1063 MS--QASY-IDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIP 1103

HSP 2 Score: 109.4 bits (272), Expect = 9.5e-21
Identity = 72/160 (45.00%), Postives = 83/160 (51.88%), Query Frame = 1


Query: 124  IPYALAIGSLMCVMLCTRLDIYFALE-VSRYQSNLGLDYWTTVNIILKYLRRT------- 183
            IPY+ AIGSLM  MLCTR D+ +AL  VSRYQSN G D+WT V  ILKYLRRT       
Sbjct: 1118 IPYSSAIGSLMYAMLCTRPDVCYALSIVSRYQSNPGRDHWTAVKNILKYLRRTRNMFLVY 1177

Query: 184  -GDYMLVVHS----------------------NEGVVVWCNIKQECITNSTVEAEYVVPK 243
             GD  L V                        N G V W + KQ C+ +ST EAEYV   
Sbjct: 1178 GGDKDLAVKGYTDSSFQTDKDDSKSQSGVFTLNGGAVSWRSSKQTCVADSTCEAEYVAA- 1237

Query: 244  VVPNLNSTNSIAKQQKKQISSEVVPNMNMPITLYCDNSGA 253
                  +       +K      VVPNM++PITLYCDNSGA
Sbjct: 1238 ----CEAAKEAVWIRKFLTDLGVVPNMHLPITLYCDNSGA 1272

[Close]

BLAST of Cucsa.002270 vs. NCBI nr
Match: gi|1019597807|gb|AMY96445.1| (gag/pol protein [Momordica dioica])

HSP 1 Score: 70.9 bits (172), Expect = 3.7e-09
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1


Query: 81   EEQKVCKLKRSIYGLKQSSRSWNIRFDTAIKSYGFDQNVDEPYIPYALAIGSLMCVML 139
            +EQK CKL+ SIYGLKQ+SRSWNIRFD  IK++GF QNVDE  + Y    GS++  ++
Sbjct: 959  QEQKACKLQGSIYGLKQASRSWNIRFDEVIKAFGFIQNVDESCV-YKKISGSVVAFLI 1015

HSP 2 Score: 102.8 bits (255), Expect = 8.9e-19
Identity = 59/82 (71.95%), Postives = 62/82 (75.61%), Query Frame = 1


Query: 6   QVEESTEAPVE------ESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAE 65
           Q +ESTEAPVE      ESKVEE QEKKEETVV TE+ EKEEAV E EE AK EE PAAE
Sbjct: 54  QTDESTEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAE 113

Query: 66  VEAEAKPQVEEEKAIEEEKPTE 82
           VEAE  P VEEEK +EEEKP E
Sbjct: 114 VEAE--PPVEEEKVVEEEKPVE 133

The following BLAST results are available for this feature:

BLAST of Cucsa.002270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ICP22_SHV21	3.0e-06	41.03	Transcriptional regulator ICP22 homolog OS=Saimiriine herpesvirus 2 (strain 11) ...	[more]
POLX_TOBAC	5.1e-06	51.79	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
NFL_BOVIN	8.6e-06	42.65	Neurofilament light polypeptide OS=Bos taurus GN=NEFL PE=1 SV=3	[more]

BLAST of Cucsa.002270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTG9_CUCSA	8.3e-32	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G187170 PE=4 SV=1	[more]
A5AUE7_VITVI	4.1e-23	43.75	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021035 PE=4 SV=1	[more]
A5AUE7_VITVI	3.1e-10	75.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021035 PE=4 SV=1	[more]
E2GK51_BRYDI	6.0e-14	36.21	Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1	[more]
A0A165U314_9ROSI	2.6e-09	58.62	Gag/pol protein OS=Momordica dioica PE=4 SV=1	[more]

BLAST of Cucsa.002270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G44610.1	1.1e-06	47.76	microtubule-associated protein 18	[more]
AT1G72150.1	1.4e-06	37.35	PATELLIN 1	[more]
AT1G62480.1	1.8e-06	41.98	Vacuolar calcium-binding protein-related	[more]

BLAST of Cucsa.002270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443564\|ref\|XP_004139547.1\|	1.2e-31	100.00	PREDICTED: protein TsetseEP-like [Cucumis sativus]	[more]
gi\|147768021\|emb\|CAN69397.1\|	5.9e-23	43.75	hypothetical protein VITISV_021035 [Vitis vinifera]	[more]
gi\|147768021\|emb\|CAN69397.1\|	4.4e-10	75.00	hypothetical protein VITISV_021035 [Vitis vinifera]	[more]
gi\|299474487\|gb\|ADJ18449.1\|	8.6e-14	36.21	gag/pol protein [Bryonia dioica]	[more]
gi\|1019597807\|gb\|AMY96445.1\|	3.7e-09	58.62	gag/pol protein [Momordica dioica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013103	RVT_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.002270.1	Cucsa.002270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 77..124 score: 2.0
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 79..209 score: 3.5
None	No IPR available	PANTHER	PTHR11439:SF192	SUBFAMILY NOT NAMED	coord: 79..209 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.002270	CsaV3_1G017250	Cucumber (Chinese Long) v3	cgycucB000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.002270	Wild cucumber (PI 183967)	cgycpiB000
Cucsa.002270	Cucumber (Chinese Long) v2	cgycuB000