CsaV3_UNG046320 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCCACAACTAACCCCAAAAGAAACACACTCAAAAAGTTTTGAATTTTGTCCCATTTAACAAAAAGCTTCCATCCATGGCAGCCCCCTCTCTCTGATATTTTTCTCTCTTTCTCTTTCTTCAATCCCCATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGACGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGTTCGTTTTGTAACCATTTTGGTGTGTTTTAAGCTTTTGGGTTCATTGATGATGTACGAGTTTTCTTCTCTAGGGCTTAATCGATGCGGGAAAAGCTGCCGGCTAAGGTGGCTGAATTATCTCAGACCAGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGCAAGTTTTCTTCTCCGTTTACAGATAAAATTGTATATGTATTTTTCATTATTTCTTTGTAATTATTTTATAAACCAACTTGATGGAAAATTACTTGTTTGAAAATTTGATTTTGATAATGAAAGGAAATGGTAAGAAGTAGAGATGTAACGAAGGAAAGAAACTAATGGATGAAAAAAGATGTTGGTACGTTTTGAGATATATGTGATATGAAACGTAGTGATTTGTTTTGATTTAGGTGGGCGGTAATTGCATCACAATTACCTGGAAGAACGGACAACGACGTGAAAAACCACTGGAATACAAAGTTAAAGAAGAAGTTCAATAGTTCATTTTCTAAACCACCAAATCCCATCGTGGTTGTCACTGACCCGCCGCGATATTCCGCGACAAGTACTGCAAATTCCTTAAAACTCCATGATGATCATGAACACAACATCAACACCAACTTCAACATGTTTTCAAGCCATCCTCCTTTTGATCAAATTCCGATGTTGAACAATAACAATAATCCAATAATACCAGAACTATCCACTTCCTCATCTTCAATTTCACTACCCATCGAGCAAAACCACCTCGAATTTTCCGGTCCGAGCTCCGACGAGGCAGCAGATATCCTACAAAGTTATTTCCATGGGGTTTATGAGAACAATAATCAATACCCATATGAAGATGATGTTATGGATGGATTTGATGTAAGTAATTACATGGGATTATGATGATTAATGAATTAGAATTATTGTTGAGGACTTGGTCAAAGGGGGAAAAGGACATTTTATGTGTTTGTTTTCAATTTAATGATTCATATCATCATATGAAGTCATCTAAAGACTTTTTTATGTTTGTTTCTGACTTGTCAGTGCTTCACAAACCTTGTGTTTGCTTTACCCATTCTCTCACCATTAGCCTTAAAATGGGTCATGTGTATGTTTTCCTTTTTGAACTACACAAAAAAAAAGGTCTCTTTCTTTTCTCCATATCAATATATTAACATGTGTATGACCATTAAAGTCTTGTGTCCTCTTT ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGACGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGGCTTAATCGATGCGGGAAAAGCTGCCGGCTAAGGTGGCTGAATTATCTCAGACCAGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGTGGGCGGTAATTGCATCACAATTACCTGGAAGAACGGACAACGACGTGAAAAACCACTGGAATACAAAGTTAAAGAAGAAGTTCAATAGTTCATTTTCTAAACCACCAAATCCCATCGTGGTTGTCACTGACCCGCCGCGATATTCCGCGACAAGTACTGCAAATTCCTTAAAACTCCATGATGATCATGAACACAACATCAACACCAACTTCAACATGTTTTCAAGCCATCCTCCTTTTGATCAAATTCCGATGTTGAACAATAACAATAATCCAATAATACCAGAACTATCCACTTCCTCATCTTCAATTTCACTACCCATCGAGCAAAACCACCTCGAATTTTCCGGTCCGAGCTCCGACGAGGCAGCAGATATCCTACAAAGTTATTTCCATGGGGTTTATGAGAACAATAATCAATACCCATATGAAGATGATGTTATGGATGGATTTGATGTAAGTAATTACATGGGATTATGA ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGACGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGGCTTAATCGATGCGGGAAAAGCTGCCGGCTAAGGTGGCTGAATTATCTCAGACCAGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGTGGGCGGTAATTGCATCACAATTACCTGGAAGAACGGACAACGACGTGAAAAACCACTGGAATACAAAGTTAAAGAAGAAGTTCAATAGTTCATTTTCTAAACCACCAAATCCCATCGTGGTTGTCACTGACCCGCCGCGATATTCCGCGACAAGTACTGCAAATTCCTTAAAACTCCATGATGATCATGAACACAACATCAACACCAACTTCAACATGTTTTCAAGCCATCCTCCTTTTGATCAAATTCCGATGTTGAACAATAACAATAATCCAATAATACCAGAACTATCCACTTCCTCATCTTCAATTTCACTACCCATCGAGCAAAACCACCTCGAATTTTCCGGTCCGAGCTCCGACGAGGCAGCAGATATCCTACAAAGTTATTTCCATGGGGTTTATGAGAACAATAATCAATACCCATATGAAGATGATGTTATGGATGGATTTGATGTAAGTAATTACATGGGATTATGA MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLNYLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSSFSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNNPIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGFDVSNYMGL
BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_004135811.1 (PREDICTED: transcription factor RAX2-like [Cucumis sativus] >KGN66202.1 hypothetical protein Csa_1G575180 [Cucumis sativus]) HSP 1 Score: 526.2 bits (1354), Expect = 6.2e-146 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_008450812.1 (PREDICTED: transcription factor RAX2-like [Cucumis melo]) HSP 1 Score: 461.5 bits (1186), Expect = 1.9e-126 Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_023530624.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77 Identity = 166/257 (64.59%), Postives = 183/257 (71.21%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_022933833.1 (transcription factor MYB36-like [Cucurbita moschata]) HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76 Identity = 164/257 (63.81%), Postives = 182/257 (70.82%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_023005467.1 (transcription factor RAX3-like [Cucurbita maxima]) HSP 1 Score: 287.3 bits (734), Expect = 4.8e-74 Identity = 157/256 (61.33%), Postives = 176/256 (68.75%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT3G49690.1 (myb domain protein 84) HSP 1 Score: 219.2 bits (557), Expect = 2.9e-57 Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT5G65790.1 (myb domain protein 68) HSP 1 Score: 218.4 bits (555), Expect = 5.0e-57 Identity = 91/116 (78.45%), Postives = 106/116 (91.38%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT4G37780.1 (myb domain protein 87) HSP 1 Score: 215.3 bits (547), Expect = 4.2e-56 Identity = 98/163 (60.12%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein) HSP 1 Score: 212.2 bits (539), Expect = 3.6e-55 Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT5G57620.1 (myb domain protein 36) HSP 1 Score: 209.1 bits (531), Expect = 3.0e-54 Identity = 109/216 (50.46%), Postives = 141/216 (65.28%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9M2Y9|RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 5.3e-56 Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|F4JSU0|MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 7.6e-55 Identity = 98/163 (60.12%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9SJL7|RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 6.5e-54 Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9FKL2|MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.5e-53 Identity = 109/216 (50.46%), Postives = 141/216 (65.28%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9FG68|RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.0e-51 Identity = 84/116 (72.41%), Postives = 101/116 (87.07%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|A0A0A0LZB2|A0A0A0LZB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 4.1e-146 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|A0A1S3BPH8|A0A1S3BPH8_CUCME (transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126 Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|M0TBM8|M0TBM8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103989521 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58 Identity = 114/205 (55.61%), Postives = 144/205 (70.24%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|A0A1U8AV47|A0A1U8AV47_NELNU (transcription repressor MYB6-like OS=Nelumbo nucifera OX=4432 GN=LOC104604454 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 4.2e-58 Identity = 99/116 (85.34%), Postives = 108/116 (93.10%), Query Frame = 0
BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|M5VX13|M5VX13_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G216000 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 5.5e-58 Identity = 99/122 (81.15%), Postives = 113/122 (92.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |