CsaV3_UNG046320 (gene) Cucumber (Chinese Long) v3

NameCsaV3_UNG046320
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionMYB transcription factor
Locationscaffold72 : 8092 .. 9584 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCACAACTAACCCCAAAAGAAACACACTCAAAAAGTTTTGAATTTTGTCCCATTTAACAAAAAGCTTCCATCCATGGCAGCCCCCTCTCTCTGATATTTTTCTCTCTTTCTCTTTCTTCAATCCCCATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGACGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGTTCGTTTTGTAACCATTTTGGTGTGTTTTAAGCTTTTGGGTTCATTGATGATGTACGAGTTTTCTTCTCTAGGGCTTAATCGATGCGGGAAAAGCTGCCGGCTAAGGTGGCTGAATTATCTCAGACCAGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGCAAGTTTTCTTCTCCGTTTACAGATAAAATTGTATATGTATTTTTCATTATTTCTTTGTAATTATTTTATAAACCAACTTGATGGAAAATTACTTGTTTGAAAATTTGATTTTGATAATGAAAGGAAATGGTAAGAAGTAGAGATGTAACGAAGGAAAGAAACTAATGGATGAAAAAAGATGTTGGTACGTTTTGAGATATATGTGATATGAAACGTAGTGATTTGTTTTGATTTAGGTGGGCGGTAATTGCATCACAATTACCTGGAAGAACGGACAACGACGTGAAAAACCACTGGAATACAAAGTTAAAGAAGAAGTTCAATAGTTCATTTTCTAAACCACCAAATCCCATCGTGGTTGTCACTGACCCGCCGCGATATTCCGCGACAAGTACTGCAAATTCCTTAAAACTCCATGATGATCATGAACACAACATCAACACCAACTTCAACATGTTTTCAAGCCATCCTCCTTTTGATCAAATTCCGATGTTGAACAATAACAATAATCCAATAATACCAGAACTATCCACTTCCTCATCTTCAATTTCACTACCCATCGAGCAAAACCACCTCGAATTTTCCGGTCCGAGCTCCGACGAGGCAGCAGATATCCTACAAAGTTATTTCCATGGGGTTTATGAGAACAATAATCAATACCCATATGAAGATGATGTTATGGATGGATTTGATGTAAGTAATTACATGGGATTATGATGATTAATGAATTAGAATTATTGTTGAGGACTTGGTCAAAGGGGGAAAAGGACATTTTATGTGTTTGTTTTCAATTTAATGATTCATATCATCATATGAAGTCATCTAAAGACTTTTTTATGTTTGTTTCTGACTTGTCAGTGCTTCACAAACCTTGTGTTTGCTTTACCCATTCTCTCACCATTAGCCTTAAAATGGGTCATGTGTATGTTTTCCTTTTTGAACTACACAAAAAAAAAGGTCTCTTTCTTTTCTCCATATCAATATATTAACATGTGTATGACCATTAAAGTCTTGTGTCCTCTTT

mRNA sequence

ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGACGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGGCTTAATCGATGCGGGAAAAGCTGCCGGCTAAGGTGGCTGAATTATCTCAGACCAGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGTGGGCGGTAATTGCATCACAATTACCTGGAAGAACGGACAACGACGTGAAAAACCACTGGAATACAAAGTTAAAGAAGAAGTTCAATAGTTCATTTTCTAAACCACCAAATCCCATCGTGGTTGTCACTGACCCGCCGCGATATTCCGCGACAAGTACTGCAAATTCCTTAAAACTCCATGATGATCATGAACACAACATCAACACCAACTTCAACATGTTTTCAAGCCATCCTCCTTTTGATCAAATTCCGATGTTGAACAATAACAATAATCCAATAATACCAGAACTATCCACTTCCTCATCTTCAATTTCACTACCCATCGAGCAAAACCACCTCGAATTTTCCGGTCCGAGCTCCGACGAGGCAGCAGATATCCTACAAAGTTATTTCCATGGGGTTTATGAGAACAATAATCAATACCCATATGAAGATGATGTTATGGATGGATTTGATGTAAGTAATTACATGGGATTATGA

Coding sequence (CDS)

ATGGGAAGAGCTCCTTGTTGTGACAAAGCCAGTGTTAAGAGAGGGCCATGGTCACCTCAAGAAGACGCCACACTCACTGCCTTTATTCATAAACATGGCACCGGTGGCAATTGGATCGCTCTCCCTCATAAAGCAGGGCTTAATCGATGCGGGAAAAGCTGCCGGCTAAGGTGGCTGAATTATCTCAGACCAGATATTAAACATGGAGGTTTCACTCAAGAGGAAGATAATGTTATTTGTTCTCTCTATTCCACCATTGGAAGTAGGTGGGCGGTAATTGCATCACAATTACCTGGAAGAACGGACAACGACGTGAAAAACCACTGGAATACAAAGTTAAAGAAGAAGTTCAATAGTTCATTTTCTAAACCACCAAATCCCATCGTGGTTGTCACTGACCCGCCGCGATATTCCGCGACAAGTACTGCAAATTCCTTAAAACTCCATGATGATCATGAACACAACATCAACACCAACTTCAACATGTTTTCAAGCCATCCTCCTTTTGATCAAATTCCGATGTTGAACAATAACAATAATCCAATAATACCAGAACTATCCACTTCCTCATCTTCAATTTCACTACCCATCGAGCAAAACCACCTCGAATTTTCCGGTCCGAGCTCCGACGAGGCAGCAGATATCCTACAAAGTTATTTCCATGGGGTTTATGAGAACAATAATCAATACCCATATGAAGATGATGTTATGGATGGATTTGATGTAAGTAATTACATGGGATTATGA

Protein sequence

MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLNYLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSSFSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNNPIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGFDVSNYMGL
BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_004135811.1 (PREDICTED: transcription factor RAX2-like [Cucumis sativus] >KGN66202.1 hypothetical protein Csa_1G575180 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 6.2e-146
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120

Query: 121 FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNN 180
           FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNN
Sbjct: 121 FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNN 180

Query: 181 PIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGF 240
           PIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGF
Sbjct: 181 PIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGF 240

Query: 241 DVSNYMGL 249
           DVSNYMGL
Sbjct: 241 DVSNYMGL 248

BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_008450812.1 (PREDICTED: transcription factor RAX2-like [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.9e-126
Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWA+IASQLPGRTDNDVKNHWNTKLKKKFN+S
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120

Query: 121 FSKPPNPIVVVTDPPRYSATSTANSLK-LHDDHEHNINTNFNMFSSHPPFDQIPMLNNNN 180
            S+PPN  ++VTDP RYS+T TANSLK LH+DHEHNINTN+NMFSSHP FDQIPMLNNNN
Sbjct: 121 LSEPPNSTMIVTDPSRYSST-TANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNN 180

Query: 181 NPIIPELSTSSSSISLP-IEQNHL-EFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVM 240
           NPIIPELSTSSSSISLP IEQNHL EFSGP SDEA  ILQSYFHGVY+  NQYPYEDDVM
Sbjct: 181 NPIIPELSTSSSSISLPNIEQNHLEEFSGPGSDEAEIILQSYFHGVYD-YNQYPYEDDVM 240

Query: 241 DGFDVSNYMGL 249
           +GF VSNYMGL
Sbjct: 241 EGFGVSNYMGL 249

BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_023530624.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 166/257 (64.59%), Postives = 183/257 (71.21%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL AFIHKHGT GNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 49  MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 108

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFT EEDN+IC+LYST+GSRWAVIASQLPGRTDNDVKNHWNTKLKKKFN S
Sbjct: 109 YLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFN-S 168

Query: 121 FSKPPNPIVVV-------------TDPPRYSATSTANSLKLHDDHEHNI---NTNFNMFS 180
           FS+ P P +                + P YSA   A+ L+L +  + N+   +TNF+   
Sbjct: 169 FSERPTPTIAAATQQNAITNMAFPANAPPYSA--AADWLRLDEQMDGNLMFADTNFDF-- 228

Query: 181 SHPPFDQIPMLNNNNNPIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVY 240
            H P DQ PML N       ELSTSSS+ SLPIEQN L F G     A + L SY  G Y
Sbjct: 229 KHDPEDQFPMLWNPQ-----ELSTSSSNSSLPIEQNQLPFGG----NAGEALLSY--GFY 284

Query: 241 ENNNQYPYEDDVMDGFD 242
               QYPY  DVM+G D
Sbjct: 289 ----QYPY-GDVMEGLD 284

BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_022933833.1 (transcription factor MYB36-like [Cucurbita moschata])

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 164/257 (63.81%), Postives = 182/257 (70.82%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL AFIHKHGT GNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFT EEDN+IC+LYST+GSRWAVIASQLPGRTDNDVKNHWNTKLKKKFN S
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFN-S 120

Query: 121 FSKPPNPIVVV-------------TDPPRYSATSTANSLKLHDDHEHNI---NTNFNMFS 180
           FS+ P P +                + P YSA   A+ ++L +  + N+   + NF+   
Sbjct: 121 FSERPAPTIAAATQQNAITNMAFPANAPPYSA--AADWIRLDEQMDGNLMFADANFDF-- 180

Query: 181 SHPPFDQIPMLNNNNNPIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVY 240
            H P DQ PML N       ELSTSSS+ SLPIEQN L F G     A + L SY  G Y
Sbjct: 181 KHDPEDQFPMLWNPQ-----ELSTSSSNSSLPIEQNQLPFGG----NAGEALLSY--GFY 236

Query: 241 ENNNQYPYEDDVMDGFD 242
               QYPY  DVM+G D
Sbjct: 241 ----QYPY-GDVMEGLD 236

BLAST of CsaV3_UNG046320 vs. NCBI nr
Match: XP_023005467.1 (transcription factor RAX3-like [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 4.8e-74
Identity = 157/256 (61.33%), Postives = 176/256 (68.75%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSPQEDATL AFIHKHGT GNWIALP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPQEDATLKAFIHKHGTAGNWIALPRKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFT EEDN+IC+LYST+GSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNS 
Sbjct: 61  YLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSF 120

Query: 121 FSKPPNPIVVVT------------DPPRYSATSTANSLKLHDDHEHNI---NTNFNMFSS 180
             +    I  VT            + P YSA   A+ L+  +  + N+   + NF+    
Sbjct: 121 SERSAPTIAAVTQQNAITNMAFPANAPPYSA--AADWLRFDEQMDGNLMFADANFDF--K 180

Query: 181 HPPFDQIPMLNNNNNPIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYE 240
           H P DQ PML N       ELSTSSS+ SLP+EQN + F G   +          +G Y 
Sbjct: 181 HDPEDQFPMLWNPQ-----ELSTSSSNSSLPVEQNQVPFGGNDGETVLS------YGFY- 236

Query: 241 NNNQYPYEDDVMDGFD 242
              QYPY  DVM+G D
Sbjct: 241 ---QYPY-GDVMEGLD 236

BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT3G49690.1 (myb domain protein 84)

HSP 1 Score: 219.2 bits (557), Expect = 2.9e-57
Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+EDA L ++I   GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRP+IKHGGF++EE+N+ICSLY TIGSRW++IA+QLPGRTDND+KN+WNT+LKKK
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116

BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT5G65790.1 (myb domain protein 68)

HSP 1 Score: 218.4 bits (555), Expect = 5.0e-57
Identity = 91/116 (78.45%), Postives = 106/116 (91.38%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+EDA L  +I   GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRP+IKHGGF++EEDN+IC+LY TIGSRW++IA+QLPGRTDND+KN+WNT+LKKK
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116

BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT4G37780.1 (myb domain protein 87)

HSP 1 Score: 215.3 bits (547), Expect = 4.2e-56
Identity = 98/163 (60.12%), Postives = 126/163 (77.30%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK +VK+GPWS +EDA L ++I KHGTG NWI+LP + G+ RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRP++KHGGFT EED +ICSLY TIGSRW++IASQLPGRTDND+KN+WNT+LKKK  S 
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 FSKP-PNPIVVVTDPPRYSATSTANSLKL-HDDHEHNINTNFN 162
             K     + V  +    S++S+ N +++ HD++  +  T +N
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYN 163

BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 212.2 bits (539), Expect = 3.6e-55
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSP+EDA L  +I K GTGGNWIALPHKAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLK 115
           YLRP+I+HG FT+EEDN+I SL+++IGSRW+VIA+ L GRTDND+KN+WNTKLK
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLK 114

BLAST of CsaV3_UNG046320 vs. TAIR10
Match: AT5G57620.1 (myb domain protein 36)

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-54
Identity = 109/216 (50.46%), Postives = 141/216 (65.28%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+ED  L  +I K+GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRP+IKHGGF++EED +I SLY +IGSRW++IA+QLPGRTDND+KN+WNTKLKKK    
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 FSKPPNPIVVVTD-------------PPRYSATSTANSLKLHDDHEHNINTNFNMFSSHP 180
             K  N    +TD               +  + S    L+LH   + N+ + F+ F ++P
Sbjct: 121 -QKQMNRQDSITDSXXXXXXXXXXXXXXQNLSNSALERLQLHMQLQ-NLQSPFSSFYNNP 180

Query: 181 PF--DQIPMLNNNNNPIIPELSTSSSSISLPIEQNH 202
                  P+L +      P+L++  S   L +  +H
Sbjct: 181 ILWPKLHPLLQSTTTNQNPKLASQESFHPLGVNVDH 214

BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9M2Y9|RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.3e-56
Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+EDA L ++I   GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRP+IKHGGF++EE+N+ICSLY TIGSRW++IA+QLPGRTDND+KN+WNT+LKKK
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116

BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|F4JSU0|MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.6e-55
Identity = 98/163 (60.12%), Postives = 126/163 (77.30%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK +VK+GPWS +EDA L ++I KHGTG NWI+LP + G+ RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRP++KHGGFT EED +ICSLY TIGSRW++IASQLPGRTDND+KN+WNT+LKKK  S 
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK 120

Query: 121 FSKP-PNPIVVVTDPPRYSATSTANSLKL-HDDHEHNINTNFN 162
             K     + V  +    S++S+ N +++ HD++  +  T +N
Sbjct: 121 QGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYN 163

BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9SJL7|RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.5e-54
Identity = 90/114 (78.95%), Postives = 104/114 (91.23%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSP+EDA L  +I K GTGGNWIALPHKAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLK 115
           YLRP+I+HG FT+EEDN+I SL+++IGSRW+VIA+ L GRTDND+KN+WNTKLK
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLK 114

BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9FKL2|MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.5e-53
Identity = 109/216 (50.46%), Postives = 141/216 (65.28%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VK+GPWSP+ED  L  +I K+GTGGNWIALP K GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRP+IKHGGF++EED +I SLY +IGSRW++IA+QLPGRTDND+KN+WNTKLKKK    
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGR 120

Query: 121 FSKPPNPIVVVTD-------------PPRYSATSTANSLKLHDDHEHNINTNFNMFSSHP 180
             K  N    +TD               +  + S    L+LH   + N+ + F+ F ++P
Sbjct: 121 -QKQMNRQDSITDSXXXXXXXXXXXXXXQNLSNSALERLQLHMQLQ-NLQSPFSSFYNNP 180

Query: 181 PF--DQIPMLNNNNNPIIPELSTSSSSISLPIEQNH 202
                  P+L +      P+L++  S   L +  +H
Sbjct: 181 ILWPKLHPLLQSTTTNQNPKLASQESFHPLGVNVDH 214

BLAST of CsaV3_UNG046320 vs. Swiss-Prot
Match: sp|Q9FG68|RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-51
Identity = 84/116 (72.41%), Postives = 101/116 (87.07%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK  VKRGPWSP+ED+ L  +I K+G GGNWI+ P KAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRP+IKHG F++EED +I SL++ IGSRW++IA+ LPGRTDND+KN+WNTKL+KK
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKK 116

BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|A0A0A0LZB2|A0A0A0LZB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 4.1e-146
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120

Query: 121 FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNN 180
           FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNN
Sbjct: 121 FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINTNFNMFSSHPPFDQIPMLNNNNN 180

Query: 181 PIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGF 240
           PIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGF
Sbjct: 181 PIIPELSTSSSSISLPIEQNHLEFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVMDGF 240

Query: 241 DVSNYMGL 249
           DVSNYMGL
Sbjct: 241 DVSNYMGL 248

BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|A0A1S3BPH8|A0A1S3BPH8_CUCME (transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126
Identity = 226/251 (90.04%), Postives = 236/251 (94.02%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIKHGGFTQEEDNVICSLYSTIGSRWA+IASQLPGRTDNDVKNHWNTKLKKKFN+S
Sbjct: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDVKNHWNTKLKKKFNNS 120

Query: 121 FSKPPNPIVVVTDPPRYSATSTANSLK-LHDDHEHNINTNFNMFSSHPPFDQIPMLNNNN 180
            S+PPN  ++VTDP RYS+T TANSLK LH+DHEHNINTN+NMFSSHP FDQIPMLNNNN
Sbjct: 121 LSEPPNSTMIVTDPSRYSST-TANSLKVLHNDHEHNINTNYNMFSSHPRFDQIPMLNNNN 180

Query: 181 NPIIPELSTSSSSISLP-IEQNHL-EFSGPSSDEAADILQSYFHGVYENNNQYPYEDDVM 240
           NPIIPELSTSSSSISLP IEQNHL EFSGP SDEA  ILQSYFHGVY+  NQYPYEDDVM
Sbjct: 181 NPIIPELSTSSSSISLPNIEQNHLEEFSGPGSDEAEIILQSYFHGVYD-YNQYPYEDDVM 240

Query: 241 DGFDVSNYMGL 249
           +GF VSNYMGL
Sbjct: 241 EGFGVSNYMGL 249

BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|M0TBM8|M0TBM8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103989521 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.9e-58
Identity = 114/205 (55.61%), Postives = 144/205 (70.24%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSP+EDATL A+I KHGTGGNWIALPHK GL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKATVKRGPWSPEEDATLKAYIEKHGTGGNWIALPHKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRP+IKHGGF+ EED++ICSLYS+IGSRW++IA+QLPGRTDND+KNHWNT+LKKK    
Sbjct: 61  YLRPNIKHGGFSVEEDHIICSLYSSIGSRWSIIAAQLPGRTDNDIKNHWNTRLKKKLLGK 120

Query: 121 FSKPPNPIVVVTDPPRYSATSTANSLKLHDDHEHNINT----NFNMFSSHPPFDQIPMLN 180
             +PP P  +  +     +T  AN++ L   H   ++        +     PF     L 
Sbjct: 121 PREPPQPRCLSVN---QVSTEVANAMSL-QTHPQTLSAPALERMQLRGCEDPFFYHHPLG 180

Query: 181 NNNNPIIPELSTSSSSISLPIEQNH 202
           +    +  +  T +S+ + PI+ +H
Sbjct: 181 DK---LFEDQHTDTSTSTTPIDSSH 198

BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|A0A1U8AV47|A0A1U8AV47_NELNU (transcription repressor MYB6-like OS=Nelumbo nucifera OX=4432 GN=LOC104604454 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.2e-58
Identity = 99/116 (85.34%), Postives = 108/116 (93.10%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDKA+VKRGPWSP+ED  L  ++ KHGTGGNWIALPHKAGL RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDTALKNYVEKHGTGGNWIALPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKK 117
           YLRPDIKHGGFT+EEDN+IC+LY TIGSRW+VIAS LPGRTDNDVKN+WNTKLKKK
Sbjct: 61  YLRPDIKHGGFTEEEDNIICNLYKTIGSRWSVIASHLPGRTDNDVKNYWNTKLKKK 116

BLAST of CsaV3_UNG046320 vs. TrEMBL
Match: tr|M5VX13|M5VX13_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G216000 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.5e-58
Identity = 99/122 (81.15%), Postives = 113/122 (92.62%), Query Frame = 0

Query: 1   MGRAPCCDKASVKRGPWSPQEDATLTAFIHKHGTGGNWIALPHKAGLNRCGKSCRLRWLN 60
           MGRAPCCDK+ VKRGPWSP+ED TL  ++H HGTGGNWI+LP KAGLNRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKSKVKRGPWSPEEDTTLKNYLHNHGTGGNWISLPTKAGLNRCGKSCRLRWLN 60

Query: 61  YLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSS 120
           YLRPDIK GGFT+EEDN+IC+LY TIGSRW+VIASQLPGRTDNDVKN+WNTKLKKKF ++
Sbjct: 61  YLRPDIKRGGFTEEEDNLICTLYGTIGSRWSVIASQLPGRTDNDVKNYWNTKLKKKFFAA 120

Query: 121 FS 123
           ++
Sbjct: 121 YN 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004135811.16.2e-146100.00PREDICTED: transcription factor RAX2-like [Cucumis sativus] >KGN66202.1 hypothet... [more]
XP_008450812.11.9e-12690.04PREDICTED: transcription factor RAX2-like [Cucumis melo][more]
XP_023530624.12.1e-7764.59transcription factor MYB36-like [Cucurbita pepo subsp. pepo][more]
XP_022933833.12.3e-7663.81transcription factor MYB36-like [Cucurbita moschata][more]
XP_023005467.14.8e-7461.33transcription factor RAX3-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT3G49690.12.9e-5778.45myb domain protein 84[more]
AT5G65790.15.0e-5778.45myb domain protein 68[more]
AT4G37780.14.2e-5660.12myb domain protein 87[more]
AT2G36890.13.6e-5578.95Duplicated homeodomain-like superfamily protein[more]
AT5G57620.13.0e-5450.46myb domain protein 36[more]
Match NameE-valueIdentityDescription
sp|Q9M2Y9|RAX3_ARATH5.3e-5678.45Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1[more]
sp|F4JSU0|MYB87_ARATH7.6e-5560.12Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1[more]
sp|Q9SJL7|RAX2_ARATH6.5e-5478.95Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1[more]
sp|Q9FKL2|MYB36_ARATH5.5e-5350.46Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1[more]
sp|Q9FG68|RAX1_ARATH3.0e-5172.41Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LZB2|A0A0A0LZB2_CUCSA4.1e-146100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1[more]
tr|A0A1S3BPH8|A0A1S3BPH8_CUCME1.2e-12690.04transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1[more]
tr|M0TBM8|M0TBM8_MUSAM1.9e-5855.61Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103989... [more]
tr|A0A1U8AV47|A0A1U8AV47_NELNU4.2e-5885.34transcription repressor MYB6-like OS=Nelumbo nucifera OX=4432 GN=LOC104604454 PE... [more]
tr|M5VX13|M5VX13_PRUPE5.5e-5881.15Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G216000 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG046320.1CsaV3_UNG046320.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
e-value: 2.6E-11
score: 53.6
coord: 67..115
e-value: 1.7E-11
score: 54.2
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..62
e-value: 2.3E-14
score: 53.2
coord: 69..111
e-value: 1.6E-11
score: 44.1
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..113
e-value: 9.68545E-9
score: 49.111
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..62
e-value: 1.80314E-8
score: 48.3406
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 70..127
e-value: 7.1E-19
score: 69.6
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 7..68
e-value: 4.3E-18
score: 66.8
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..188
NoneNo IPR availablePANTHERPTHR10641:SF654TRANSCRIPTION FACTOR RAX2-RELATEDcoord: 1..188
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..62
score: 12.281
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 63..117
score: 20.08
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 11..109

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG046320CsaV3_1G040050Cucumber (Chinese Long) v3cuccucB033
The following block(s) are covering this gene:

None