CsaV3_7G035120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G035120
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 22189309 .. 22189653 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTGTAATTGTTATCAAATTTGTAAACTTTCAGTTCTTCATTTTTTACAAACAAAACTTGAAGGTTGTGTTTAGTTTCTTCATGCTTCGTATAAATTTGGTTAGTGTACTCTTACATTTTGAATAAGATAAGCTTCAACTTTCCTTTTTGTTTTTAAAATTGAAGAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

mRNA sequence

ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

Coding sequence (CDS)

ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

Protein sequence

MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Homology
[Close]
BLAST of CsaV3_7G035120 vs. NCBI nr
Match: KGN45564.1 (hypothetical protein Csa_7G452190 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 7.0e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60
          MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Sbjct: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60

[Close]
BLAST of CsaV3_7G035120 vs. TrEMBL
Match: tr|A0A0A0K9Q3|A0A0A0K9Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452190 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60
          MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Sbjct: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60

The following BLAST results are available for this feature:
BLAST of CsaV3_7G035120 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45564.17.0e-27100.00hypothetical protein Csa_7G452190 [Cucumis sativus][more]
BLAST of CsaV3_7G035120 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G035120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G035120 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9Q3|A0A0A0K9Q3_CUCSA4.7e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452190 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G035120.1CsaV3_7G035120.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G035120CSPI07G23140Wild cucumber (PI 183967)cpicucB414
CsaV3_7G035120CsGy7G021410Cucumber (Gy14) v2cgybcucB347
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G035120Silver-seed gourdcarcucB0138
CsaV3_7G035120Silver-seed gourdcarcucB0234
CsaV3_7G035120Silver-seed gourdcarcucB0781
CsaV3_7G035120Silver-seed gourdcarcucB1073
CsaV3_7G035120Cucumber (Gy14) v2cgybcucB155
CsaV3_7G035120Cucumber (Gy14) v1cgycucB550
CsaV3_7G035120Cucurbita maxima (Rimu)cmacucB0318
CsaV3_7G035120Cucurbita maxima (Rimu)cmacucB0456
CsaV3_7G035120Cucurbita maxima (Rimu)cmacucB0587
CsaV3_7G035120Cucurbita maxima (Rimu)cmacucB1089
CsaV3_7G035120Cucurbita moschata (Rifu)cmocucB0313
CsaV3_7G035120Cucurbita moschata (Rifu)cmocucB0449
CsaV3_7G035120Cucurbita moschata (Rifu)cmocucB0576
CsaV3_7G035120Cucurbita moschata (Rifu)cmocucB1071
CsaV3_7G035120Cucurbita pepo (Zucchini)cpecucB0181
CsaV3_7G035120Cucurbita pepo (Zucchini)cpecucB0415
CsaV3_7G035120Cucurbita pepo (Zucchini)cpecucB0734
CsaV3_7G035120Cucurbita pepo (Zucchini)cpecucB0790
CsaV3_7G035120Wild cucumber (PI 183967)cpicucB192
CsaV3_7G035120Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G035120Bottle gourd (USVL1VR-Ls)cuclsiB569
CsaV3_7G035120Melon (DHL92) v3.5.1cucmeB537
CsaV3_7G035120Melon (DHL92) v3.5.1cucmeB572
CsaV3_7G035120Melon (DHL92) v3.6.1cucmedB525
CsaV3_7G035120Melon (DHL92) v3.6.1cucmedB559
CsaV3_7G035120Watermelon (Charleston Gray)cucwcgB546
CsaV3_7G035120Watermelon (Charleston Gray)cucwcgB598
CsaV3_7G035120Watermelon (97103) v1cucwmB591
CsaV3_7G035120Watermelon (97103) v1cucwmB612
CsaV3_7G035120Watermelon (97103) v2cucwmbB575
CsaV3_7G035120Watermelon (97103) v2cucwmbB592
CsaV3_7G035120Wax gourdcucwgoB680
CsaV3_7G035120Wax gourdcucwgoB715