CSPI07G23140 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G23140
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 19505309 .. 19505653 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTGTAATTGTTATCAAATTTGTAAACTTTCAGTTCTTCATTTTTTACAAACAAAACTTGAAGGTTGTGTTTAGTTTCTTCATGCTTCGTATAAATTTGGTTAGTGTACTCTTACATTTTGAATAAGATAAGCTTCAACTTTCCTTTTCGTTTTTAAAATTGAAGAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

mRNA sequence

ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG

Coding sequence (CDS)

ATGGATAATTTCTTCGGTGGGCCTTCTTCATCTTCTTCTGGGATCTATTTCTCGAAGGAGATTTGTATTAATGTTGGCTTTGAGTGGAAGAGGCATGGTGATGAAGATTACATAATTCCATCTCATGTTGCAAACAGCATTGATGCTGATATTGCAGTTGACATTCTCCCACTCAACTCTTAG
Homology
[Close]
BLAST of CSPI07G23140 vs. TrEMBL
Match: A0A0A0K9Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452190 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60
          MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Sbjct: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60

[Close]
BLAST of CSPI07G23140 vs. NCBI nr
Match: gi|700190331|gb|KGN45564.1| (hypothetical protein Csa_7G452190 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.6e-27
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60
          MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS
Sbjct: 1  MDNFFGGPSSSSSGIYFSKEICINVGFEWKRHGDEDYIIPSHVANSIDADIAVDILPLNS 60

The following BLAST results are available for this feature:
BLAST of CSPI07G23140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G23140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9Q3_CUCSA2.5e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G452190 PE=4 SV=1[more]
BLAST of CSPI07G23140 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G23140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190331|gb|KGN45564.1|3.6e-27100.00hypothetical protein Csa_7G452190 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G23140.1CSPI07G23140.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G23140CsaV3_7G035120Cucumber (Chinese Long) v3cpicucB414
CSPI07G23140CsGy7G021410Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G23140Cucumber (Gy14) v1cgycpiB535
CSPI07G23140Cucumber (Gy14) v1cgycpiB511
CSPI07G23140Cucurbita maxima (Rimu)cmacpiB277
CSPI07G23140Cucurbita maxima (Rimu)cmacpiB387
CSPI07G23140Cucurbita maxima (Rimu)cmacpiB494
CSPI07G23140Cucurbita maxima (Rimu)cmacpiB939
CSPI07G23140Cucurbita moschata (Rifu)cmocpiB267
CSPI07G23140Cucurbita moschata (Rifu)cmocpiB376
CSPI07G23140Cucurbita moschata (Rifu)cmocpiB486
CSPI07G23140Cucurbita moschata (Rifu)cmocpiB918
CSPI07G23140Cucumber (Chinese Long) v2cpicuB354
CSPI07G23140Melon (DHL92) v3.5.1cpimeB525
CSPI07G23140Melon (DHL92) v3.5.1cpimeB561
CSPI07G23140Watermelon (Charleston Gray)cpiwcgB553
CSPI07G23140Watermelon (Charleston Gray)cpiwcgB597
CSPI07G23140Watermelon (97103) v1cpiwmB569
CSPI07G23140Watermelon (97103) v1cpiwmB585
CSPI07G23140Watermelon (97103) v1cpiwmB602
CSPI07G23140Cucurbita pepo (Zucchini)cpecpiB158
CSPI07G23140Cucurbita pepo (Zucchini)cpecpiB337
CSPI07G23140Cucurbita pepo (Zucchini)cpecpiB595
CSPI07G23140Cucurbita pepo (Zucchini)cpecpiB636
CSPI07G23140Bottle gourd (USVL1VR-Ls)cpilsiB517
CSPI07G23140Bottle gourd (USVL1VR-Ls)cpilsiB548
CSPI07G23140Melon (DHL92) v3.6.1cpimedB512
CSPI07G23140Melon (DHL92) v3.6.1cpimedB547
CSPI07G23140Cucumber (Gy14) v2cgybcpiB152
CSPI07G23140Silver-seed gourdcarcpiB0134
CSPI07G23140Silver-seed gourdcarcpiB0237
CSPI07G23140Silver-seed gourdcarcpiB0778
CSPI07G23140Silver-seed gourdcarcpiB1063
CSPI07G23140Cucumber (Chinese Long) v3cpicucB394
CSPI07G23140Watermelon (97103) v2cpiwmbB578
CSPI07G23140Watermelon (97103) v2cpiwmbB596
CSPI07G23140Wax gourdcpiwgoB665
CSPI07G23140Wax gourdcpiwgoB702