CsaV3_7G034660 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAATAGTGAGAATCGCATTTCTTAAGAATCTCTCTCTCCGCTTCAATTCTTTCTCTCTCTTGGAGAGAATTGAGCGTAACCCTAAGCTTAGAACTCAAATCAACCATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTATGTGCCGATATGATGTGGGGAAAAGGAATGTTTTTTTTTTTTGCAATTTTGATCGATATACTTCGTTTTAGGGAGTCATAGTTTTATATGTGAAACTGTGATGAGAATGCTGAGGATTGAATTAACTAATTCACTTGATATTTTCTATACGAGTTTAACTCGTGCTTCTTCTTTGAGTGATGTAATTCGTCGAGTTCTCTGATAATGAATAATCTTCAAGAATTTAGACTTGTGGTATGGGAATGATCAAATTATTTCCATTACTTCTGATGATTTGGTTGTAAGTAATGAGATTGTTTGAGGTTTGTTCGTTGTCGTATCTCATCAATTAGTAACTTATTGTTTGGCTGCTTCAATATATAATTTTCAAGTTTTTGAGAACAGAACACAGATCCACGTTTGATGCTTTCATGGCTTGATGGAGTACACAAGATTTGTGATTCCGTGGTCAATGCTTGTCGATAATGGTGAATTTTGTAGAAAATTATAATGCCCCTTTTGAGCTTAGGTATTCGGATAGTCTTATACGCCCTGTATGAGCAAATGAATTCAACTTTAATCTCTTATCTGTTCACATTCTAATGGTGTTAATATGTGAGACTATTCAAGGTTGTAACTTTTACCTAGCCAAATCGCTGGTCATCCTTGATTCACCCGTTCCAATCCTTTTGTTGTAGAGAACTTTTACCTTGCTTATTCTTGACCATTGTTTGATCATTAAACCAAAGCTCTTCAAATGAAATATGTTTTGTTCTTCCAAGTTAACTTGAAATCTTTGATCGGAATTTAGTTCATCTTTGCAAAAGTTAGGCATGTTTTTTGATTTCAATGAGAGGTGGTGGTATTTTGAGCAGGGTCGTTTTGAATGATTATGGTATCTCTTGAGTGTGTTGCTAGTAGTTGGTTTAGTTACAAATGAAATGGTGTCTCTGCAGAGTATAGAGTCTTGTGCTATCTTGATTTCTATTACAATAAAAGTCTTGGTAAATGCCCCTTCAAAAATGATATTGCACATTGATTGAACTCGGAAAATTGCCAAATAGGAAAAGTATGCTTTAAAGCTCTCCGTACGCTACCCTTGATTCTTTCAGCACTTGGTGCATCAACATCATGATCCTCGCAGGTGCATTGCTTTTATCGTTTCTCGTAGATATTTTACATCAAGTTTAACTGTTTTTCGTTTTAGCAACATTAACAGTTACAGGCAGTAAATGAACTGGCAGGTCCTCCCGAATTCCTACTCCACAAATGTTCTCATTGAGGCACATTCTTTGTCTTCATCAACCTGGTGGGATATTCTTCTTTATCATCCCAAGTGAAGCTATAGAAATGATTGTCATTGTAACAAAAATTTCATTGGATTTGACTGGATTTTGACATATGAACTACAGACAGTTTGGTAGCAAGTTGAGTAGAGGCATTCAATGTGACAAAAGGCAAAATCAACTGTTTGCTGAGGTATGTAAAAGGTTTCAATGAGATGTAATAGCTTCTCCTCTGTTCATAAAGCTCCATTTAAATCATTTGAAGTTGAAGCTATTCCTTTCCATCGACCTTTTAATCAATCTTACAAGATGGTTGATTAAAAAAGAAAATAATGATATTTTATATCAGAAAGCACCCACCTGAATTTTGAACACAGAAGAACCTTTGTAAGTTTTTAAGTATGTTCTGTTCTACCACTTTTTTAATTTATGAACT ATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTATGTGCCGATATGA ATGGCGGTCCATTCTTCCAATCGCGATACTGATTCAGAGTTTGATCATAGCTCATCCCAACCGCGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCATATCGAAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGCCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCCGGTGCAGTAGGAGGCGCGTCTACAGGACTTGTATCCGGCGTTAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCGGGGCGTCTCTGGGGAAATCGGCTTGGCGTGATTGGGCTGCTATATGCGGGTTTGGAGAGCGGAATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTGTTGCGGCCGGACTTGGTACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTAAGATCGGCGGCGGTGGCTGGAGCTGTTGGCGGTGTCGTGGTTGGTTTGGCGGTGACGGGTAAGCAGATGTTGAAGCGGTATGTGCCGATATGA MAVHSSNRDTDSEFDHSSSQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGLAVTGKQMLKRYVPI
BLAST of CsaV3_7G034660 vs. NCBI nr
Match: XP_004141690.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Cucumis sativus] >XP_008462339.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1-like [Cucumis melo]) HSP 1 Score: 376.7 bits (966), Expect = 4.6e-101 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. NCBI nr
Match: KGN45513.1 (hypothetical protein Csa_7G450700 [Cucumis sativus]) HSP 1 Score: 368.2 bits (944), Expect = 1.7e-98 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. NCBI nr
Match: XP_022953829.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_022953830.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_023548834.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo] >XP_023548835.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.1 bits (941), Expect = 3.7e-98 Identity = 184/190 (96.84%), Postives = 186/190 (97.89%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. NCBI nr
Match: XP_022992412.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita maxima]) HSP 1 Score: 358.6 bits (919), Expect = 1.3e-95 Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. NCBI nr
Match: XP_023000450.1 (mitochondrial import inner membrane translocase subunit TIM23-1-like [Cucurbita maxima]) HSP 1 Score: 354.8 bits (909), Expect = 1.9e-94 Identity = 179/190 (94.21%), Postives = 183/190 (96.32%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TAIR10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23) HSP 1 Score: 247.3 bits (630), Expect = 7.7e-66 Identity = 123/187 (65.78%), Postives = 151/187 (80.75%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TAIR10
Match: AT1G72750.1 (translocase inner membrane subunit 23-2) HSP 1 Score: 247.3 bits (630), Expect = 7.7e-66 Identity = 125/181 (69.06%), Postives = 146/181 (80.66%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TAIR10
Match: AT3G04800.1 (translocase inner membrane subunit 23-3) HSP 1 Score: 183.0 bits (463), Expect = 1.8e-46 Identity = 95/171 (55.56%), Postives = 126/171 (73.68%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. Swiss-Prot
Match: sp|Q9LNQ1|TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64 Identity = 123/187 (65.78%), Postives = 151/187 (80.75%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. Swiss-Prot
Match: sp|Q38820|TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.4e-64 Identity = 125/181 (69.06%), Postives = 146/181 (80.66%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. Swiss-Prot
Match: sp|Q9S837|TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.2e-45 Identity = 95/171 (55.56%), Postives = 126/171 (73.68%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. Swiss-Prot
Match: sp|Q9USM7|TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.2e-13 Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. Swiss-Prot
Match: sp|A4IFL0|TIM23_BOVIN (Mitochondrial import inner membrane translocase subunit Tim23 OS=Bos taurus OX=9913 GN=TIMM23 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.0e-11 Identity = 55/150 (36.67%), Postives = 73/150 (48.67%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TrEMBL
Match: tr|A0A1S3CGP4|A0A1S3CGP4_CUCME (mitochondrial import inner membrane translocase subunit TIM23-1-like OS=Cucumis melo OX=3656 GN=LOC103500713 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 3.1e-101 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TrEMBL
Match: tr|A0A0A0K7V6|A0A0A0K7V6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450700 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TrEMBL
Match: tr|A0A2P5FEH5|A0A2P5FEH5_9ROSA (Mitochondrial inner membrane translocase subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_081220 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 2.4e-77 Identity = 153/190 (80.53%), Postives = 170/190 (89.47%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TrEMBL
Match: tr|W9QE41|W9QE41_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013469 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 5.3e-77 Identity = 150/181 (82.87%), Postives = 163/181 (90.06%), Query Frame = 0
BLAST of CsaV3_7G034660 vs. TrEMBL
Match: tr|A0A251PV87|A0A251PV87_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G045100 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 6.9e-77 Identity = 152/191 (79.58%), Postives = 171/191 (89.53%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |