CsaV3_7G030580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G030580
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 19351472 .. 19351810 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCATAATCCGCAAAGAACAAAGCAAAGGGCTAGGCGATTTGATACACACGTAGCCACATTTCGTATACTCCTCCCGCCTCGGGCTCGCACTGTGAATTGGGAAACTCGTTTCTCACTGATCTGATGGTGTGGCGATGCCGAAAACAAACTTTAATTTAATCTTCATCTCCTCATTGACCGTACAAACTTCAAAATTTGTGAAACTGAAACAGCAATAGACAAAGCTAATCCCAATTCCAAGAGACAAATTCCACAGATCCTTTGCTCAAATTTGCAGCAAAATCACCGCGACCTGATTGCTATGTCGAGTCGGCCAATCATTACTTTCTCTTAG

mRNA sequence

ATGGAGCATAATCCGCAAAGAACAAAGCAAAGGGCTAGGCGATTTGATACACACGTAGCCACATTTCGTATACTCCTCCCGCCTCGGGCTCGCACTGTGAATTGGGAAACTCCAATAGACAAAGCTAATCCCAATTCCAAGAGACAAATTCCACAGATCCTTTGCTCAAATTTGCAGCAAAATCACCGCGACCTGATTGCTATGTCGAGTCGGCCAATCATTACTTTCTCTTAG

Coding sequence (CDS)

ATGGAGCATAATCCGCAAAGAACAAAGCAAAGGGCTAGGCGATTTGATACACACGTAGCCACATTTCGTATACTCCTCCCGCCTCGGGCTCGCACTGTGAATTGGGAAACTCCAATAGACAAAGCTAATCCCAATTCCAAGAGACAAATTCCACAGATCCTTTGCTCAAATTTGCAGCAAAATCACCGCGACCTGATTGCTATGTCGAGTCGGCCAATCATTACTTTCTCTTAG

Protein sequence

MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQNHRDLIAMSSRPIITFS
Homology
[Close]
BLAST of CsaV3_7G030580 vs. NCBI nr
Match: KGN45078.1 (hypothetical protein Csa_7G420710 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60
          MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ
Sbjct: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60

Query: 61 NHRDLIAMSSRPIITFS 78
          NHRDLIAMSSRPIITFS
Sbjct: 61 NHRDLIAMSSRPIITFS 77

[Close]
BLAST of CsaV3_7G030580 vs. TrEMBL
Match: tr|A0A0A0K6G9|A0A0A0K6G9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420710 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-36
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60
          MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ
Sbjct: 1  MEHNPQRTKQRARRFDTHVATFRILLPPRARTVNWETPIDKANPNSKRQIPQILCSNLQQ 60

Query: 61 NHRDLIAMSSRPIITFS 78
          NHRDLIAMSSRPIITFS
Sbjct: 61 NHRDLIAMSSRPIITFS 77

The following BLAST results are available for this feature:
BLAST of CsaV3_7G030580 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45078.12.8e-36100.00hypothetical protein Csa_7G420710 [Cucumis sativus][more]
BLAST of CsaV3_7G030580 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G030580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G030580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K6G9|A0A0A0K6G9_CUCSA1.8e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420710 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G030580.1CsaV3_7G030580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G030580Cucumber (Chinese Long) v3cuccucB154
CsaV3_7G030580Silver-seed gourdcarcucB0128
CsaV3_7G030580Silver-seed gourdcarcucB0486
CsaV3_7G030580Silver-seed gourdcarcucB0804
CsaV3_7G030580Silver-seed gourdcarcucB0858
CsaV3_7G030580Cucumber (Gy14) v2cgybcucB154
CsaV3_7G030580Cucumber (Gy14) v2cgybcucB347
CsaV3_7G030580Cucumber (Gy14) v1cgycucB181
CsaV3_7G030580Cucurbita maxima (Rimu)cmacucB0317
CsaV3_7G030580Cucurbita maxima (Rimu)cmacucB0462
CsaV3_7G030580Cucurbita maxima (Rimu)cmacucB0595
CsaV3_7G030580Cucurbita maxima (Rimu)cmacucB1084
CsaV3_7G030580Cucurbita moschata (Rifu)cmocucB0312
CsaV3_7G030580Cucurbita moschata (Rifu)cmocucB0455
CsaV3_7G030580Cucurbita moschata (Rifu)cmocucB0582
CsaV3_7G030580Cucurbita moschata (Rifu)cmocucB1066
CsaV3_7G030580Cucurbita pepo (Zucchini)cpecucB0188
CsaV3_7G030580Cucurbita pepo (Zucchini)cpecucB0422
CsaV3_7G030580Cucurbita pepo (Zucchini)cpecucB0726
CsaV3_7G030580Cucurbita pepo (Zucchini)cpecucB0789
CsaV3_7G030580Wild cucumber (PI 183967)cpicucB191
CsaV3_7G030580Wild cucumber (PI 183967)cpicucB414
CsaV3_7G030580Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G030580Bottle gourd (USVL1VR-Ls)cuclsiB550
CsaV3_7G030580Melon (DHL92) v3.5.1cucmeB537
CsaV3_7G030580Melon (DHL92) v3.5.1cucmeB570
CsaV3_7G030580Melon (DHL92) v3.6.1cucmedB525
CsaV3_7G030580Melon (DHL92) v3.6.1cucmedB556
CsaV3_7G030580Watermelon (Charleston Gray)cucwcgB548
CsaV3_7G030580Watermelon (Charleston Gray)cucwcgB555
CsaV3_7G030580Watermelon (97103) v1cucwmB593
CsaV3_7G030580Watermelon (97103) v1cucwmB601
CsaV3_7G030580Watermelon (97103) v2cucwmbB536
CsaV3_7G030580Watermelon (97103) v2cucwmbB594
CsaV3_7G030580Wax gourdcucwgoB672
CsaV3_7G030580Wax gourdcucwgoB730