CsaV3_7G028360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G028360
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr7 : 17871892 .. 17872781 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCCTTCTTCTCTTCCTTTCAAAACCCGTCTCACTTTTCATTCTTCCCGCTCAATCTCGCCCTCAACATCCTCCATTCATTCCGACCACTTTCAACATCAAGCTCACCCGGAAAACCCAAATGGAATTCACTTTCCAACGTCTTCATTTCCAACCCAACTCTTCTAATCCTTCAATCATGCTCTTCCATGTTCCAATTAAAGCAAATTCAAGCCCATATTACTTGTACTGGCCTCATGAACCAAATCTTCCCTGCCAGCCGCCTCCTAGCCTTTTGTGCGCTCTCCGATTCCGGTGACATTCACTATGCACATCTCATCTTCGATCAAACTGAGCTCCCCAATTGCTTTTTCTGGAATACGATGATCAAGGGTTATTGCAAAGCTAATCACCCTTCAATGGGGTTCTCATTTTTCCGGCAAATGATTCGGAATCGCGCTGAATTTGATTCTGGAAGCTTTGTTTTTGCTCTCAAGGCTTGCGGTCAATTTGCGGAGAAAATTGTGGGAATGGCCGTGCATTCTGTTATTTGGAAACGGGGGTTTGATTCTGACTTATTTGTACAAAATGGATTGATCCAAAACTATGTTGAAACTGGGTGTCTTGGTTTTGCACGCCAAATGTTTGATGAAAGTTCTGTTAAGGATGTTGTTACATGGACGACGATGATCAATGGGTACGCAAGGAACAATTGGTTGGATGAGGCTATAGCATTATTCAATTCGATGTTGTCGAGTGATGTCAAGCCGAATGAGGTTACTATGATCGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTCTGAAATGGGGAAGACTCTTCATGAACATATAAGAAGAAAGGACATAACCTGTAGTCTTAATTTGCTCAATGCAATGTTGGATAT

mRNA sequence

ATGAAACCCTTCTTCTCTTCCTTTCAAAACCCGTCTCACTTTTCATTCTTCCCGCTCAATCTCGCCCTCAACATCCTCCATTCATTCCGACCACTTTCAACATCAAGCTCACCCGGAAAACCCAAATGGAATTCACTTTCCAACGTCTTCATTTCCAACCCAACTCTTCTAATCCTTCAATCATGCTCTTCCATGTTCCAATTAAAGCAAATTCAAGCCCATATTACTTGTACTGGCCTCATGAACCAAATCTTCCCTGCCAGCCGCCTCCTAGCCTTTTGTGCGCTCTCCGATTCCGGTGACATTCACTATGCACATCTCATCTTCGATCAAACTGAGCTCCCCAATTGCTTTTTCTGGAATACGATGATCAAGGGTTATTGCAAAGCTAATCACCCTTCAATGGGGTTCTCATTTTTCCGGCAAATGATTCGGAATCGCGCTGAATTTGATTCTGGAAGCTTTGTTTTTGCTCTCAAGGCTTGCGGTCAATTTGCGGAGAAAATTGTGGGAATGGCCGTGCATTCTGTTATTTGGAAACGGGGGTTTGATTCTGACTTATTTGTACAAAATGGATTGATCCAAAACTATGTTGAAACTGGGTGTCTTGGTTTTGCACGCCAAATGTTTGATGAAAGTTCTGTTAAGGATGTTGTTACATGGACGACGATGATCAATGGGTACGCAAGGAACAATTGGTTGGATGAGGCTATAGCATTATTCAATTCGATGTTGTCGAGTGATGTCAAGCCGAATGAGGTTACTATGATCGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTCTGAAATGGGGAAGACTCTTCATGAACATATAAGAAGAAAGGACATAACCTGTAGTCTTAATTTGCTCAATGCAATGTTGGATAT

Coding sequence (CDS)

ATGAAACCCTTCTTCTCTTCCTTTCAAAACCCGTCTCACTTTTCATTCTTCCCGCTCAATCTCGCCCTCAACATCCTCCATTCATTCCGACCACTTTCAACATCAAGCTCACCCGGAAAACCCAAATGGAATTCACTTTCCAACGTCTTCATTTCCAACCCAACTCTTCTAATCCTTCAATCATGCTCTTCCATGTTCCAATTAAAGCAAATTCAAGCCCATATTACTTGTACTGGCCTCATGAACCAAATCTTCCCTGCCAGCCGCCTCCTAGCCTTTTGTGCGCTCTCCGATTCCGGTGACATTCACTATGCACATCTCATCTTCGATCAAACTGAGCTCCCCAATTGCTTTTTCTGGAATACGATGATCAAGGGTTATTGCAAAGCTAATCACCCTTCAATGGGGTTCTCATTTTTCCGGCAAATGATTCGGAATCGCGCTGAATTTGATTCTGGAAGCTTTGTTTTTGCTCTCAAGGCTTGCGGTCAATTTGCGGAGAAAATTGTGGGAATGGCCGTGCATTCTGTTATTTGGAAACGGGGGTTTGATTCTGACTTATTTGTACAAAATGGATTGATCCAAAACTATGTTGAAACTGGGTGTCTTGGTTTTGCACGCCAAATGTTTGATGAAAGTTCTGTTAAGGATGTTGTTACATGGACGACGATGATCAATGGGTACGCAAGGAACAATTGGTTGGATGAGGCTATAGCATTATTCAATTCGATGTTGTCGAGTGATGTCAAGCCGAATGAGGTTACTATGATCGCTTTGCTTTCTGCTTGCTCGCAGAAGGGAGATTCTGAAATGGGGAAGACTCTTCATGAACATATAAGAAGAAAGGACATAACCTGTAGTCTTAATTTGCTCAATGCAATGTTGGATAT

Protein sequence

MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDX
Homology
[Close]
BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_004148898.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis sativus] >KGN44842.1 hypothetical protein Csa_7G390210 [Cucumis sativus])

HSP 1 Score: 607.4 bits (1565), Expect = 2.5e-170
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW
Sbjct: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
           RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_008451419.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucumis melo])

HSP 1 Score: 558.5 bits (1438), Expect = 1.3e-155
Identity = 271/296 (91.55%), Postives = 284/296 (95.95%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSS QNPSH S FPLNLA+ ILHSFRPLSTSSS GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSIQNPSHISIFPLNLAVKILHSFRPLSTSSSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAH+TCTGLM+QIFPASRLLAFCALSDSGDIHYAHLIFDQTE PNCFFW
Sbjct: 61  SCSSMFQLKQIQAHMTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+AN+PS+GFSFFRQMIRNRAEFD GSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCQANYPSLGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+L V+NGLIQNYVETGCLGFARQ+FDESS+KDVVTWTTMINGYAR+NWLDEAIAL
Sbjct: 181 LGFDSELLVRNGLIQNYVETGCLGFARQVFDESSIKDVVTWTTMINGYARSNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSACSQKGDS MGKTLHEHIR K ITCS+NLLNAMLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_023513845.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 1.1e-130
Identity = 232/296 (78.38%), Postives = 256/296 (86.49%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKP FSS QNPS FS FPL     ILHSFRPLS+S++ GKPKWNSL+NVFI+NPTLLILQ
Sbjct: 1   MKPLFSSVQNPSRFSIFPLKFTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMF LKQIQAH+TCTGLMNQIFPASR++AFCALSD+GDIHYAHL+F Q E PNCF W
Sbjct: 61  SCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+A  PSMGF FFRQMIRNR E D GSFV ALK CGQFA K V MAVHSVIWK
Sbjct: 121 NTMIKGYCRARCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFAGKAVRMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GF S+L VQNGLIQ YVETGC+GFARQ+FDESSVKDVVTWTTMINGY  NN LDEAI L
Sbjct: 181 LGFGSELLVQNGLIQYYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIML 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           F+ MLSS+V+PNEVTMIALLSACSQKGD  MG++LHE I+RK+I+ S+NL+N MLD
Sbjct: 241 FDLMLSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_022960464.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 470.7 bits (1210), Expect = 3.7e-129
Identity = 229/296 (77.36%), Postives = 254/296 (85.81%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKP FSS QNPS FS FP  L   ILHSFRPLS+S++ GKPKWNSL+NVFI+NPTLLILQ
Sbjct: 1   MKPLFSSVQNPSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMF LKQIQAH+TCTGLMNQIFPASR++AFCALSD+GDIHYAHL+F Q E PNCF W
Sbjct: 61  SCSSMFHLKQIQAHMTCTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+A  PSMGF FFRQMIRNR E D GSFV ALK CGQFA K V MAVHSV+WK
Sbjct: 121 NTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKVCGQFAGKAVRMAVHSVVWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GF S+L VQNGLIQ YVE GC+GFARQ+FDESSVKDVVTWTTMINGY  NN LDEAI L
Sbjct: 181 LGFGSELLVQNGLIQYYVEIGCIGFARQVFDESSVKDVVTWTTMINGYTTNNCLDEAIML 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           F+ M SS+V+PNEVTMIALLSACSQKGD  MG++LHE I+RK+I+ S+NL+N MLD
Sbjct: 241 FDLMSSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. NCBI nr
Match: XP_023004481.1 (pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 468.8 bits (1205), Expect = 1.4e-128
Identity = 227/296 (76.69%), Postives = 254/296 (85.81%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKP FSS QN S FS FP  L   ILHSFRPLS+S++ GKPKWNSL+NVFI+NPTLLILQ
Sbjct: 1   MKPLFSSVQNSSRFSIFPFKLTFKILHSFRPLSSSAAAGKPKWNSLTNVFITNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMF LKQIQAH+ CTGLMNQIFPASR++AFCALSD+GDIHYAHL+F Q E PNCF W
Sbjct: 61  SCSSMFHLKQIQAHMICTGLMNQIFPASRVVAFCALSDAGDIHYAHLVFAQIENPNCFLW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+A  PSMGF FFRQMIRNR E D GSFV ALKACG FA K + MAVHSV+WK
Sbjct: 121 NTMIKGYCRAKCPSMGFLFFRQMIRNRVELDCGSFVSALKACGHFAGKAIRMAVHSVVWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GF S L VQNGLIQ YVETGC+GFARQ+FDESSVKDVVTWTTMINGY  NN+LDEA+ L
Sbjct: 181 LGFGSGLLVQNGLIQFYVETGCIGFARQVFDESSVKDVVTWTTMINGYTTNNYLDEAVML 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           F+ MLSS+V+PNEVTMIALLSACSQKGD  MG++LHE I+RK+I+ S+NL+N MLD
Sbjct: 241 FDLMLSSNVEPNEVTMIALLSACSQKGDYVMGRSLHELIKRKNISSSVNLVNTMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. TAIR10
Match: AT2G22410.1 (SLOW GROWTH 1)

HSP 1 Score: 174.9 bits (442), Expect = 7.6e-44
Identity = 100/287 (34.84%), Postives = 156/287 (54.36%), Query Frame = 0 

Query: 18  PLNLALN-ILHSFRPLSTSSSP---GKP-KWNSLSNVFISNPTLLILQSCSSMFQLKQIQ 77
           PL   LN  L+S     T S P    KP  WNS  +  + NP L +L+ C  +  LKQIQ
Sbjct: 14  PLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQ 73

Query: 78  AHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANH 137
           A +   GL+   F +SRL+AFCALS+S  + Y+  I    E PN F WN  I+G+ ++ +
Sbjct: 74  AQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESEN 133

Query: 138 PSMGFSFFRQMIRN---RAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFV 197
           P   F  ++QM+R+    +  D  ++    K C       +G  +   + K   +    V
Sbjct: 134 PKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV 193

Query: 198 QNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV 257
            N  I  +   G +  AR++FDES V+D+V+W  +INGY +    ++AI ++  M S  V
Sbjct: 194 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 253

Query: 258 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           KP++VTMI L+S+CS  GD   GK  +E+++   +  ++ L+NA++D
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300

[Close]
BLAST of CsaV3_7G028360 vs. TAIR10
Match: AT3G22690.1 (Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-38
Identity = 90/276 (32.61%), Postives = 155/276 (56.16%), Query Frame = 0 

Query: 24  NILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQ 83
           N+LH    +  +++  KP   + S    + P+   L++C ++ +LK     +T  GL N 
Sbjct: 6   NVLHLSPMVLATTTTTKPSLLNQSKCTKATPS--SLKNCKTIDELKMFHRSLTKQGLDND 65

Query: 84  IFPASRLLA-FCALSDSGDIHYAHLIFDQTE-LPNCFFWNTMIKGYCKANHPSMGFSFFR 143
           +   ++L+A  C L     + +A  +F+ +E    CF +N++I+GY  +   +     F 
Sbjct: 66  VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL 125

Query: 144 QMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETG 203
           +M+ +    D  +F F L AC +   K  G+ +H +I K G+  DLFVQN L+  Y E G
Sbjct: 126 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 185

Query: 204 CLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSML-SSDVKPNEVTMIALL 263
            L  AR++FDE S ++VV+WT+MI GYAR ++  +A+ LF  M+   +V PN VTM+ ++
Sbjct: 186 ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 245

Query: 264 SACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           SAC++  D E G+ ++  IR   I  +  +++A++D
Sbjct: 246 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279

[Close]
BLAST of CsaV3_7G028360 vs. TAIR10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-36
Identity = 84/245 (34.29%), Postives = 139/245 (56.73%), Query Frame = 0 

Query: 56  LLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAF--CALSDSGDIHYAHLIFDQTE 115
           LL     SS+ +L+QI A     G+        + L F   +L     + YAH +F + E
Sbjct: 21  LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80

Query: 116 LP-NCFFWNTMIKGYCKANHPSMGFSFFRQM-IRNRAEFDSGSFVFALKACGQFAEKIVG 175
            P N F WNT+I+GY +  +    FS +R+M +    E D+ ++ F +KA    A+  +G
Sbjct: 81  KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140

Query: 176 MAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARN 235
             +HSV+ + GF S ++VQN L+  Y   G +  A ++FD+   KD+V W ++ING+A N
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200

Query: 236 NWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLL 295
              +EA+AL+  M S  +KP+  T+++LLSAC++ G   +GK +H ++ +  +T +L+  
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260

Query: 296 NAMLD 297
           N +LD
Sbjct: 261 NVLLD 265

[Close]
BLAST of CsaV3_7G028360 vs. TAIR10
Match: AT3G05240.1 (mitochondrial editing factor 19)

HSP 1 Score: 141.4 bits (355), Expect = 9.3e-34
Identity = 69/224 (30.80%), Postives = 122/224 (54.46%), Query Frame = 0 

Query: 54  PTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFC-ALSDSGDIHYAHLIFDQT 113
           P L  L++C S+ +L Q+   +  + ++  + P SRL+ FC    ++ ++ YA  +F+  
Sbjct: 8   PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67

Query: 114 ELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGM 173
           + P+ + WN+MI+GY  + +P     F+++M+R     D  +F + LKAC    +   G 
Sbjct: 68  DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127

Query: 174 AVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNN 233
            VH  + K GF+ +++V   L+  Y+  G + +  ++F++    +VV W ++I+G+  NN
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187

Query: 234 WLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLH 277
              +AI  F  M S+ VK NE  M+ LL AC +  D   GK  H
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231

[Close]
BLAST of CsaV3_7G028360 vs. TAIR10
Match: AT3G12770.1 (mitochondrial editing factor 22)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33
Identity = 86/270 (31.85%), Postives = 142/270 (52.59%), Query Frame = 0 

Query: 32  LSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLL 91
           +S +S    P   + S +   +    ++ S +   QLKQI A +   GL    F  ++L+
Sbjct: 1   MSEASCLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI 60

Query: 92  AFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFD 151
              A S  GDI +A  +FD    P  F WN +I+GY + NH       +  M   R   D
Sbjct: 61  H--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 120

Query: 152 SGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFD 211
           S +F   LKAC   +   +G  VH+ +++ GFD+D+FVQNGLI  Y +   LG AR +F+
Sbjct: 121 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 180

Query: 212 ESSV--KDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDS 271
              +  + +V+WT +++ YA+N    EA+ +F+ M   DVKP+ V ++++L+A +   D 
Sbjct: 181 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 240

Query: 272 EMGKTLHEHIRR------KDITCSLNLLNA 294
           + G+++H  + +       D+  SLN + A
Sbjct: 241 KQGRSIHASVVKMGLEIEPDLLISLNTMYA 268

[Close]
BLAST of CsaV3_7G028360 vs. Swiss-Prot
Match: sp|Q9SJZ3|PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42
Identity = 100/287 (34.84%), Postives = 156/287 (54.36%), Query Frame = 0 

Query: 18  PLNLALN-ILHSFRPLSTSSSP---GKP-KWNSLSNVFISNPTLLILQSCSSMFQLKQIQ 77
           PL   LN  L+S     T S P    KP  WNS  +  + NP L +L+ C  +  LKQIQ
Sbjct: 14  PLTPKLNRSLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQ 73

Query: 78  AHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANH 137
           A +   GL+   F +SRL+AFCALS+S  + Y+  I    E PN F WN  I+G+ ++ +
Sbjct: 74  AQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESEN 133

Query: 138 PSMGFSFFRQMIRN---RAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFV 197
           P   F  ++QM+R+    +  D  ++    K C       +G  +   + K   +    V
Sbjct: 134 PKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHV 193

Query: 198 QNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDV 257
            N  I  +   G +  AR++FDES V+D+V+W  +INGY +    ++AI ++  M S  V
Sbjct: 194 HNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGV 253

Query: 258 KPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           KP++VTMI L+S+CS  GD   GK  +E+++   +  ++ L+NA++D
Sbjct: 254 KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300

[Close]
BLAST of CsaV3_7G028360 vs. Swiss-Prot
Match: sp|Q9LUJ2|PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 6.5e-37
Identity = 90/276 (32.61%), Postives = 155/276 (56.16%), Query Frame = 0 

Query: 24  NILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQ 83
           N+LH    +  +++  KP   + S    + P+   L++C ++ +LK     +T  GL N 
Sbjct: 6   NVLHLSPMVLATTTTTKPSLLNQSKCTKATPS--SLKNCKTIDELKMFHRSLTKQGLDND 65

Query: 84  IFPASRLLA-FCALSDSGDIHYAHLIFDQTE-LPNCFFWNTMIKGYCKANHPSMGFSFFR 143
           +   ++L+A  C L     + +A  +F+ +E    CF +N++I+GY  +   +     F 
Sbjct: 66  VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL 125

Query: 144 QMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETG 203
           +M+ +    D  +F F L AC +   K  G+ +H +I K G+  DLFVQN L+  Y E G
Sbjct: 126 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 185

Query: 204 CLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSML-SSDVKPNEVTMIALL 263
            L  AR++FDE S ++VV+WT+MI GYAR ++  +A+ LF  M+   +V PN VTM+ ++
Sbjct: 186 ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 245

Query: 264 SACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           SAC++  D E G+ ++  IR   I  +  +++A++D
Sbjct: 246 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279

[Close]
BLAST of CsaV3_7G028360 vs. Swiss-Prot
Match: sp|A8MQA3|PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 8.0e-35
Identity = 84/245 (34.29%), Postives = 139/245 (56.73%), Query Frame = 0 

Query: 56  LLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAF--CALSDSGDIHYAHLIFDQTE 115
           LL     SS+ +L+QI A     G+        + L F   +L     + YAH +F + E
Sbjct: 21  LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80

Query: 116 LP-NCFFWNTMIKGYCKANHPSMGFSFFRQM-IRNRAEFDSGSFVFALKACGQFAEKIVG 175
            P N F WNT+I+GY +  +    FS +R+M +    E D+ ++ F +KA    A+  +G
Sbjct: 81  KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140

Query: 176 MAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARN 235
             +HSV+ + GF S ++VQN L+  Y   G +  A ++FD+   KD+V W ++ING+A N
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200

Query: 236 NWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLL 295
              +EA+AL+  M S  +KP+  T+++LLSAC++ G   +GK +H ++ +  +T +L+  
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260

Query: 296 NAMLD 297
           N +LD
Sbjct: 261 NVLLD 265

[Close]
BLAST of CsaV3_7G028360 vs. Swiss-Prot
Match: sp|Q9MA95|PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 69/224 (30.80%), Postives = 122/224 (54.46%), Query Frame = 0 

Query: 54  PTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFC-ALSDSGDIHYAHLIFDQT 113
           P L  L++C S+ +L Q+   +  + ++  + P SRL+ FC    ++ ++ YA  +F+  
Sbjct: 8   PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESI 67

Query: 114 ELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGM 173
           + P+ + WN+MI+GY  + +P     F+++M+R     D  +F + LKAC    +   G 
Sbjct: 68  DCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGS 127

Query: 174 AVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNN 233
            VH  + K GF+ +++V   L+  Y+  G + +  ++F++    +VV W ++I+G+  NN
Sbjct: 128 CVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNN 187

Query: 234 WLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLH 277
              +AI  F  M S+ VK NE  M+ LL AC +  D   GK  H
Sbjct: 188 RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231

[Close]
BLAST of CsaV3_7G028360 vs. Swiss-Prot
Match: sp|Q9LTV8|PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.8e-32
Identity = 86/270 (31.85%), Postives = 142/270 (52.59%), Query Frame = 0 

Query: 32  LSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLL 91
           +S +S    P   + S +   +    ++ S +   QLKQI A +   GL    F  ++L+
Sbjct: 1   MSEASCLASPLLYTNSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLI 60

Query: 92  AFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFD 151
              A S  GDI +A  +FD    P  F WN +I+GY + NH       +  M   R   D
Sbjct: 61  H--ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 120

Query: 152 SGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFD 211
           S +F   LKAC   +   +G  VH+ +++ GFD+D+FVQNGLI  Y +   LG AR +F+
Sbjct: 121 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 180

Query: 212 ESSV--KDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDS 271
              +  + +V+WT +++ YA+N    EA+ +F+ M   DVKP+ V ++++L+A +   D 
Sbjct: 181 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 240

Query: 272 EMGKTLHEHIRR------KDITCSLNLLNA 294
           + G+++H  + +       D+  SLN + A
Sbjct: 241 KQGRSIHASVVKMGLEIEPDLLISLNTMYA 268

[Close]
BLAST of CsaV3_7G028360 vs. TrEMBL
Match: tr|A0A0A0K8Z0|A0A0A0K8Z0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390210 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.7e-170
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW
Sbjct: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
           RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL
Sbjct: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD
Sbjct: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. TrEMBL
Match: tr|A0A1S3BSJ4|A0A1S3BSJ4_CUCME (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103492719 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 8.9e-156
Identity = 271/296 (91.55%), Postives = 284/296 (95.95%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQ 60
           MKPFFSS QNPSH S FPLNLA+ ILHSFRPLSTSSS GKPKWNSLSNVFISNPTLLILQ
Sbjct: 1   MKPFFSSIQNPSHISIFPLNLAVKILHSFRPLSTSSSAGKPKWNSLSNVFISNPTLLILQ 60

Query: 61  SCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFW 120
           SCSSMFQLKQIQAH+TCTGLM+QIFPASRLLAFCALSDSGDIHYAHLIFDQTE PNCFFW
Sbjct: 61  SCSSMFQLKQIQAHMTCTGLMSQIFPASRLLAFCALSDSGDIHYAHLIFDQTEHPNCFFW 120

Query: 121 NTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWK 180
           NTMIKGYC+AN+PS+GFSFFRQMIRNRAEFD GSFVFALKACGQFAEKIVGMAVHSVIWK
Sbjct: 121 NTMIKGYCQANYPSLGFSFFRQMIRNRAEFDCGSFVFALKACGQFAEKIVGMAVHSVIWK 180

Query: 181 RGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIAL 240
            GFDS+L V+NGLIQNYVETGCLGFARQ+FDESS+KDVVTWTTMINGYAR+NWLDEAIAL
Sbjct: 181 LGFDSELLVRNGLIQNYVETGCLGFARQVFDESSIKDVVTWTTMINGYARSNWLDEAIAL 240

Query: 241 FNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           FNSMLSSDV+PNEVTMIALLSACSQKGDS MGKTLHEHIR K ITCS+NLLNAMLD
Sbjct: 241 FNSMLSSDVEPNEVTMIALLSACSQKGDSVMGKTLHEHIRGKGITCSVNLLNAMLD 296

[Close]
BLAST of CsaV3_7G028360 vs. TrEMBL
Match: tr|A0A2P4I887|A0A2P4I887_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_06359 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 6.3e-93
Identity = 178/299 (59.53%), Postives = 217/299 (72.58%), Query Frame = 0 

Query: 1   MKPFFSSFQNPSHFSFFPLNLALNI-LH--SFRPLSTSSSPGKPKWNSLSNVFISNPTLL 60
           MKP   S QN        L L   + LH  S RP S S S  K KWNS +NV I+NPTLL
Sbjct: 1   MKPLLPSSQNSISLLLSALTLRSQLHLHSLSLRPFS-SISTNKAKWNSTTNVIITNPTLL 60

Query: 61  ILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNC 120
           I++SC++M QLKQIQAH+T T L+   FP SR+LAFCAL+DSGDI YA ++F Q E PN 
Sbjct: 61  IMESCTTMLQLKQIQAHMTRTALITHTFPVSRVLAFCALADSGDIQYARVLFSQIERPNT 120

Query: 121 FFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSV 180
           + WNTMI+GYCKA  P++GFSFFRQM R   E D  SFVF LKAC QF   + G +VH  
Sbjct: 121 YMWNTMIRGYCKAKIPTIGFSFFRQMARECVEMDRRSFVFVLKACEQFCTVLEGESVHCW 180

Query: 181 IWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEA 240
           IWK GFDSDL V+NGL+  Y E GCL FAR++FD S  +DVVTWT+MI+GY  +N  +EA
Sbjct: 181 IWKMGFDSDLVVRNGLVHFYAECGCLNFAREVFDRSFERDVVTWTSMIDGYVVHNCSEEA 240

Query: 241 IALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
           + LFNSML SDV+PNEVTMIA+LSACS KGD  MGK++HE+I+++++  SLNL NAMLD
Sbjct: 241 LKLFNSMLMSDVEPNEVTMIAVLSACSLKGDLTMGKSIHEYIKKRNVNYSLNLQNAMLD 298

[Close]
BLAST of CsaV3_7G028360 vs. TrEMBL
Match: tr|A0A251R3C2|A0A251R3C2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G201400 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 165/272 (60.66%), Postives = 209/272 (76.84%), Query Frame = 0 

Query: 25  ILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQI 84
           +L S +P S S S  K  WNS +NV I+NPTLLI++SC++M +LKQIQA +TCTGL+   
Sbjct: 17  LLQSLKPFS-SMSTTKAIWNSKTNVIITNPTLLIMESCTTMLELKQIQAQMTCTGLITHT 76

Query: 85  FPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMI 144
           FP SR+LAFCAL+D GDI YAHL+F Q E PN + WNTMI+GYCK   P++GFSFF QM+
Sbjct: 77  FPLSRILAFCALADGGDIQYAHLLFTQIEKPNTYMWNTMIRGYCKVQIPTIGFSFFGQMV 136

Query: 145 RNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLG 204
           R   E D  SF+FALKAC QF   + G +VH +IWK GFDSDL V+NGL+  Y E G L 
Sbjct: 137 RQHVEMDGRSFIFALKACEQFTRILEGHSVHCLIWKLGFDSDLLVRNGLVHYYAEGGFLS 196

Query: 205 FARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACS 264
            AR++FDE+ V+DVVTWTTMI+GYA     DEA+ LF SML SDV+PNEVT+IA+LSACS
Sbjct: 197 LARKVFDETFVRDVVTWTTMIDGYATRTCSDEAMKLFGSMLVSDVEPNEVTIIAVLSACS 256

Query: 265 QKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
            KG+  +GKT+HE++++K++ CSLNLLNA+LD
Sbjct: 257 DKGNGGVGKTIHEYVQKKNVNCSLNLLNALLD 287

[Close]
BLAST of CsaV3_7G028360 vs. TrEMBL
Match: tr|A0A251R0F3|A0A251R0F3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G201400 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 165/272 (60.66%), Postives = 209/272 (76.84%), Query Frame = 0 

Query: 25  ILHSFRPLSTSSSPGKPKWNSLSNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQI 84
           +L S +P S S S  K  WNS +NV I+NPTLLI++SC++M +LKQIQA +TCTGL+   
Sbjct: 17  LLQSLKPFS-SMSTTKAIWNSKTNVIITNPTLLIMESCTTMLELKQIQAQMTCTGLITHT 76

Query: 85  FPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMI 144
           FP SR+LAFCAL+D GDI YAHL+F Q E PN + WNTMI+GYCK   P++GFSFF QM+
Sbjct: 77  FPLSRILAFCALADGGDIQYAHLLFTQIEKPNTYMWNTMIRGYCKVQIPTIGFSFFGQMV 136

Query: 145 RNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLG 204
           R   E D  SF+FALKAC QF   + G +VH +IWK GFDSDL V+NGL+  Y E G L 
Sbjct: 137 RQHVEMDGRSFIFALKACEQFTRILEGHSVHCLIWKLGFDSDLLVRNGLVHYYAEGGFLS 196

Query: 205 FARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACS 264
            AR++FDE+ V+DVVTWTTMI+GYA     DEA+ LF SML SDV+PNEVT+IA+LSACS
Sbjct: 197 LARKVFDETFVRDVVTWTTMIDGYATRTCSDEAMKLFGSMLVSDVEPNEVTIIAVLSACS 256

Query: 265 QKGDSEMGKTLHEHIRRKDITCSLNLLNAMLD 297
            KG+  +GKT+HE++++K++ CSLNLLNA+LD
Sbjct: 257 DKGNGGVGKTIHEYVQKKNVNCSLNLLNALLD 287

The following BLAST results are available for this feature:
BLAST of CsaV3_7G028360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148898.12.5e-170100.00PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-... [more]
XP_008451419.11.3e-15591.55PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... [more]
XP_023513845.11.1e-13078.38pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucur... [more]
XP_022960464.13.7e-12977.36pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucur... [more]
XP_023004481.11.4e-12876.69pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Cucur... [more]
BLAST of CsaV3_7G028360 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22410.17.6e-4434.84SLOW GROWTH 1[more]
AT3G22690.13.6e-3832.61Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repe... [more]
AT4G21065.14.4e-3634.29Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G05240.19.3e-3430.80mitochondrial editing factor 19[more]
AT3G12770.11.6e-3331.85mitochondrial editing factor 22[more]
BLAST of CsaV3_7G028360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SJZ3|PP169_ARATH1.4e-4234.84Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
sp|Q9LUJ2|PP249_ARATH6.5e-3732.61Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
sp|A8MQA3|PP330_ARATH8.0e-3534.29Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
sp|Q9MA95|PP214_ARATH1.7e-3230.80Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis th... [more]
sp|Q9LTV8|PP224_ARATH2.8e-3231.85Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
BLAST of CsaV3_7G028360 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K8Z0|A0A0A0K8Z0_CUCSA1.7e-170100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390210 PE=4 SV=1[more]
tr|A0A1S3BSJ4|A0A1S3BSJ4_CUCME8.9e-15691.55LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g22410, mito... [more]
tr|A0A2P4I887|A0A2P4I887_QUESU6.3e-9359.53Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5... [more]
tr|A0A251R3C2|A0A251R3C2_PRUPE1.1e-9260.66Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G201400 PE=4 SV=1[more]
tr|A0A251R0F3|A0A251R0F3_PRUPE1.1e-9260.66Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G201400 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G028360.1CsaV3_7G028360.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 58..176
e-value: 4.8E-10
score: 41.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 177..297
e-value: 1.3E-23
score: 85.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 219..253
e-value: 3.9E-11
score: 40.4
coord: 120..147
e-value: 4.1E-7
score: 27.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 115..162
e-value: 2.4E-8
score: 33.9
coord: 216..264
e-value: 1.6E-13
score: 50.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..251
score: 13.23
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 186..216
score: 5.481
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 10.117
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 7.87
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 228..296
NoneNo IPR availablePANTHERPTHR24015:SF514SUBFAMILY NOT NAMEDcoord: 228..296
coord: 63..238
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 63..238

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G028360CSPI07G16600Wild cucumber (PI 183967)cpicucB414
CsaV3_7G028360Cucsa.084730Cucumber (Gy14) v1cgycucB087
CsaV3_7G028360CmaCh08G003790Cucurbita maxima (Rimu)cmacucB1090
CsaV3_7G028360CmoCh08G003740Cucurbita moschata (Rifu)cmocucB1073
CsaV3_7G028360CsGy7G015070Cucumber (Gy14) v2cgybcucB347
CsaV3_7G028360Carg22174Silver-seed gourdcarcucB0899
CsaV3_7G028360Cla014717Watermelon (97103) v1cucwmB579
CsaV3_7G028360MELO3C015886Melon (DHL92) v3.5.1cucmeB553
CsaV3_7G028360ClCG09G006600Watermelon (Charleston Gray)cucwcgB538
CsaV3_7G028360Lsi02G023370Bottle gourd (USVL1VR-Ls)cuclsiB543
CsaV3_7G028360MELO3C015886.2Melon (DHL92) v3.6.1cucmedB541
CsaV3_7G028360Cla97C09G169200Watermelon (97103) v2cucwmbB583
CsaV3_7G028360Bhi09G000813Wax gourdcucwgoB718
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G028360Silver-seed gourdcarcucB0126
CsaV3_7G028360Cucurbita maxima (Rimu)cmacucB0458
CsaV3_7G028360Cucurbita maxima (Rimu)cmacucB0462
CsaV3_7G028360Cucurbita maxima (Rimu)cmacucB1084
CsaV3_7G028360Cucurbita moschata (Rifu)cmocucB0451
CsaV3_7G028360Cucurbita moschata (Rifu)cmocucB0455
CsaV3_7G028360Cucurbita moschata (Rifu)cmocucB1066
CsaV3_7G028360Cucurbita pepo (Zucchini)cpecucB0183
CsaV3_7G028360Cucurbita pepo (Zucchini)cpecucB0186
CsaV3_7G028360Cucurbita pepo (Zucchini)cpecucB0418
CsaV3_7G028360Cucurbita pepo (Zucchini)cpecucB0423
CsaV3_7G028360Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G028360Melon (DHL92) v3.5.1cucmeB538