CsaV3_7G026670 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACACAAATAGTTAAATGAAACAAATGTAAGGTGGAATGAACAAAATAATATTTAAAACTTTAATGCCCAAGTGAACTGAAATGTGAAAGTGAAAGTCAAAAATTGTAACCCCAAAATCAAAGGAAAAAAGAAAAAGGAAAAAGAAGTTAATTGGGCAGTAAGTTCCCAGTGGCATTCTTCCCTCCCACACGAATGATCTTCCCCCAACCTCCCAACACCAAAACTCCCATCTTTCTATTGTATATAAACAAACCATTTCCCCTCTTTCTCTTCCATTCTCAATACTCATTCCCTCTCCAATGGCTTCCTTCTCCACTTTCTTCCTCTTCCTTACCCTAATTTCCTCTTCCCTTTCCATCTCCCATTCCCTCACTTGCTCTTCCCAATCCTTCCCAAACAGAACCTTCACCAATTGCCAAGATCTCCCCTATCTCCACGCCTTCCTCCACTGGTCTTACAATCCCAAAAATTCCTCTCTCTCCATCGCCTTCCTCGCCCCTCCCCCCACAACCGCCGGTTGGGTCGCCTGGGCCGTCAACCCCACCGCCACCGGCATGGCTGGATCCCAAGCCTTCCTCGCCGCTTTCTTCACCAAATCCCTCACTGTCCGTACTTTCAACATTACTTCTTATAACTCCGTTCGTCCTTCCCCCACGCTCTCCTTTCCCTTCTGGGACCTTGCATCCCAATCTTCCGACGATTTGTTTGCGATCTTCGTTACCGTGAAAGTGCCGGAGAAGTCTTCGTCGTTGAACCAAGTTTGGCAAGTTGGGGCGTCGGTGGATTCCAGTATGGGTGTTCCAGCAGTGCATGAGTTTAAACCGGATAATTTGAAATCAAGAGGCGTGTTGGTGTTTGACGGAAGTGTTAGTCCTGTTGGTACTCCAAGTCCTGCTCCACGCCCTGATCATGGTGGCGCGTCTGCTGCACCTTCCACTTCGGTGGTTGGCGGTGTTAATGAAACTGCTGCTGCGCCTACCCCCAAGGCGTCGGGTCTTGACAAAGCTGGCGTTCCCGGAATTCAGCGGCGGAATTTGGGGTTTGTTGTCCTGAGTTGGTTTTTGTTTGCTGTTTGGGGGATTTTCAGTTTCTGATTTTTATTTTAGTTTAGAACTCTTGTTTGTCACTTTATTTTTTTTTTACTATTAATGAAATAATAATAATATATTTACTTGAAAACCATTTTCAAATATTAAAAAGAACAACCAAAAATAGCTAAATTTTGCAATTTTTCATCTACAATAATTTTTCAAAATTTTACACTTTTTCTTTTTGCTTTTTTAAAATAGAGAATTGAGTATAATAATGATGATGGTGATGATGGTTTATTATAGAGTTTGTTGGGGTTAGTCTGTTTGCGTTATTTGGAGGAATTGTTATTTGATTTTAATTAAAGAAAAAGCAACAATCAAAATTAAAATCTGGAGATTTGATTTAATTATGATTTTCAGTATTTGTTTGATTTCTTACTTTTACTTTCTCCCGCGGTTGGACTTATAATTTAATTTCACTAAATAAGTTGAAGAGCATTATTTAGTGCATTTTCCACGTGTACCTCACCTTGTTCAAATATCCACTACAATACACACTTCTATTTCTTTCTTTCTTTCTTTCTTTTCTTATTTGGAGTCCTATATTTCTAAATCAATTTGATTGCAACTTAAATAGTGGGATAAATCTTCTAAAATTTAAAATTATT ATGGCTTCCTTCTCCACTTTCTTCCTCTTCCTTACCCTAATTTCCTCTTCCCTTTCCATCTCCCATTCCCTCACTTGCTCTTCCCAATCCTTCCCAAACAGAACCTTCACCAATTGCCAAGATCTCCCCTATCTCCACGCCTTCCTCCACTGGTCTTACAATCCCAAAAATTCCTCTCTCTCCATCGCCTTCCTCGCCCCTCCCCCCACAACCGCCGGTTGGGTCGCCTGGGCCGTCAACCCCACCGCCACCGGCATGGCTGGATCCCAAGCCTTCCTCGCCGCTTTCTTCACCAAATCCCTCACTGTCCGTACTTTCAACATTACTTCTTATAACTCCGTTCGTCCTTCCCCCACGCTCTCCTTTCCCTTCTGGGACCTTGCATCCCAATCTTCCGACGATTTGTTTGCGATCTTCGTTACCGTGAAAGTGCCGGAGAAGTCTTCGTCGTTGAACCAAGTTTGGCAAGTTGGGGCGTCGGTGGATTCCAGTATGGGTGTTCCAGCAGTGCATGAGTTTAAACCGGATAATTTGAAATCAAGAGGCGTGTTGGTGTTTGACGGAAGTGTTAGTCCTGTTGGTACTCCAAGTCCTGCTCCACGCCCTGATCATGGTGGCGCGTCTGCTGCACCTTCCACTTCGGTGGTTGGCGGTGTTAATGAAACTGCTGCTGCGCCTACCCCCAAGGCGTCGGGTCTTGACAAAGCTGGCGTTCCCGGAATTCAGCGGCGGAATTTGGGGTTTGTTGTCCTGAGTTGGTTTTTGTTTGCTGTTTGGGGGATTTTCAGTTTCTGA ATGGCTTCCTTCTCCACTTTCTTCCTCTTCCTTACCCTAATTTCCTCTTCCCTTTCCATCTCCCATTCCCTCACTTGCTCTTCCCAATCCTTCCCAAACAGAACCTTCACCAATTGCCAAGATCTCCCCTATCTCCACGCCTTCCTCCACTGGTCTTACAATCCCAAAAATTCCTCTCTCTCCATCGCCTTCCTCGCCCCTCCCCCCACAACCGCCGGTTGGGTCGCCTGGGCCGTCAACCCCACCGCCACCGGCATGGCTGGATCCCAAGCCTTCCTCGCCGCTTTCTTCACCAAATCCCTCACTGTCCGTACTTTCAACATTACTTCTTATAACTCCGTTCGTCCTTCCCCCACGCTCTCCTTTCCCTTCTGGGACCTTGCATCCCAATCTTCCGACGATTTGTTTGCGATCTTCGTTACCGTGAAAGTGCCGGAGAAGTCTTCGTCGTTGAACCAAGTTTGGCAAGTTGGGGCGTCGGTGGATTCCAGTATGGGTGTTCCAGCAGTGCATGAGTTTAAACCGGATAATTTGAAATCAAGAGGCGTGTTGGTGTTTGACGGAAGTGTTAGTCCTGTTGGTACTCCAAGTCCTGCTCCACGCCCTGATCATGGTGGCGCGTCTGCTGCACCTTCCACTTCGGTGGTTGGCGGTGTTAATGAAACTGCTGCTGCGCCTACCCCCAAGGCGTCGGGTCTTGACAAAGCTGGCGTTCCCGGAATTCAGCGGCGGAATTTGGGGTTTGTTGTCCTGAGTTGGTTTTTGTTTGCTGTTTGGGGGATTTTCAGTTTCTGA MASFSTFFLFLTLISSSLSISHSLTCSSQSFPNRTFTNCQDLPYLHAFLHWSYNPKNSSLSIAFLAPPPTTAGWVAWAVNPTATGMAGSQAFLAAFFTKSLTVRTFNITSYNSVRPSPTLSFPFWDLASQSSDDLFAIFVTVKVPEKSSSLNQVWQVGASVDSSMGVPAVHEFKPDNLKSRGVLVFDGSVSPVGTPSPAPRPDHGGASAAPSTSVVGGVNETAAAPTPKASGLDKAGVPGIQRRNLGFVVLSWFLFAVWGIFSF
BLAST of CsaV3_7G026670 vs. NCBI nr
Match: KGN44663.1 (hypothetical protein Csa_7G368155 [Cucumis sativus]) HSP 1 Score: 518.5 bits (1334), Expect = 1.4e-143 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. NCBI nr
Match: XP_016902216.1 (PREDICTED: auxin-induced in root cultures protein 12 [Cucumis melo]) HSP 1 Score: 461.1 bits (1185), Expect = 2.6e-126 Identity = 238/264 (90.15%), Postives = 245/264 (92.80%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. NCBI nr
Match: XP_004149329.1 (PREDICTED: auxin-induced in root cultures protein 12-like [Cucumis sativus]) HSP 1 Score: 350.9 bits (899), Expect = 3.8e-93 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. NCBI nr
Match: XP_022953940.1 (auxin-induced in root cultures protein 12-like [Cucurbita moschata]) HSP 1 Score: 272.3 bits (695), Expect = 1.7e-69 Identity = 156/264 (59.09%), Postives = 191/264 (72.35%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. NCBI nr
Match: XP_023549080.1 (auxin-induced in root cultures protein 12-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.2 bits (692), Expect = 3.8e-69 Identity = 156/264 (59.09%), Postives = 188/264 (71.21%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TAIR10
Match: AT3G07390.1 (auxin-responsive family protein) HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36 Identity = 91/192 (47.40%), Postives = 124/192 (64.58%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TAIR10
Match: AT4G12980.1 (Auxin-responsive family protein) HSP 1 Score: 127.9 bits (320), Expect = 9.5e-30 Identity = 92/212 (43.40%), Postives = 123/212 (58.02%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TAIR10
Match: AT3G25290.1 (Auxin-responsive family protein) HSP 1 Score: 121.3 bits (303), Expect = 8.8e-28 Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TAIR10
Match: AT5G35735.1 (Auxin-responsive family protein) HSP 1 Score: 105.9 bits (263), Expect = 3.8e-23 Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TAIR10
Match: AT4G17280.1 (Auxin-responsive family protein) HSP 1 Score: 88.6 bits (218), Expect = 6.4e-18 Identity = 62/182 (34.07%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. Swiss-Prot
Match: sp|Q94BT2|AIR12_ARATH (Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana OX=3702 GN=AIR12 PE=1 SV=3) HSP 1 Score: 146.4 bits (368), Expect = 4.6e-34 Identity = 96/207 (46.38%), Postives = 130/207 (62.80%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. Swiss-Prot
Match: sp|Q9SV71|B561O_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana OX=3702 GN=At4g12980 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-28 Identity = 92/212 (43.40%), Postives = 123/212 (58.02%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. Swiss-Prot
Match: sp|Q9LSE7|B561C_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana OX=3702 GN=At3g25290 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26 Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. Swiss-Prot
Match: sp|Q9FKH6|B561P_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana OX=3702 GN=At5g35735 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.9e-22 Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. Swiss-Prot
Match: sp|Q8VYH6|B651B_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g17280 OS=Arabidopsis thaliana OX=3702 GN=At4g17280 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 62/182 (34.07%), Postives = 95/182 (52.20%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TrEMBL
Match: tr|A0A0A0K5A4|A0A0A0K5A4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G368155 PE=4 SV=1) HSP 1 Score: 518.5 bits (1334), Expect = 9.1e-144 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TrEMBL
Match: tr|A0A1S4E1W3|A0A1S4E1W3_CUCME (auxin-induced in root cultures protein 12 OS=Cucumis melo OX=3656 GN=LOC107991583 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 1.7e-126 Identity = 238/264 (90.15%), Postives = 245/264 (92.80%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TrEMBL
Match: tr|A0A2P4L0X7|A0A2P4L0X7_QUESU (Auxin-induced in root cultures protein 12 OS=Quercus suber OX=58331 GN=CFP56_75504 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 4.2e-40 Identity = 91/198 (45.96%), Postives = 128/198 (64.65%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TrEMBL
Match: tr|A0A2C9UP84|A0A2C9UP84_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G052900 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.6e-39 Identity = 101/188 (53.72%), Postives = 126/188 (67.02%), Query Frame = 0
BLAST of CsaV3_7G026670 vs. TrEMBL
Match: tr|A0A2P4IG42|A0A2P4IG42_QUESU (Auxin-induced in root cultures protein 12 OS=Quercus suber OX=58331 GN=CFP56_36675 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.7e-39 Identity = 91/182 (50.00%), Postives = 117/182 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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