CsaV3_7G019920 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G019920
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 9166683 .. 9167048 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCACCCCCAAAAAAAGTTTGGAATCGTTTTGCCTCTAAAGTCATTTTGAAGCTCGGCCGTGGTTTCTCGAAGCCATCGGAATCAATAACTCGAACGACACGGCGGTTTTTGAGTCGTCTCGGGTCTAGTGACTCCAGCGGAAGGCGGTGTTGCCGCTGCAGCTGCCACGACCAGCCCGAATATTGGCTCCAAGATCGTCCGAGTTTTGGGAATAATTGTAATACTAATTATTATATGGAAGTTGAATTTGAAAATGTAGAGGGGGAGGAATTGGAAGATGAAGCCGTGGATGAAAAGGCTGAGGAGTTTATTGCTAAGTTTCATGAATCTTTGAAGCTTGAAAGATTGCAACATTTTTGA

mRNA sequence

ATGCTTCCACCCCCAAAAAAAGTTTGGAATCGTTTTGCCTCTAAAGTCATTTTGAAGCTCGGCCGTGGTTTCTCGAAGCCATCGGAATCAATAACTCGAACGACACGGCGGTTTTTGAGTCGTCTCGGGTCTAGTGACTCCAGCGGAAGGCGGTGTTGCCGCTGCAGCTGCCACGACCAGCCCGAATATTGGCTCCAAGATCGTCCGAGTTTTGGGAATAATTGTAATACTAATTATTATATGGAAGTTGAATTTGAAAATGTAGAGGGGGAGGAATTGGAAGATGAAGCCGTGGATGAAAAGGCTGAGGAGTTTATTGCTAAGTTTCATGAATCTTTGAAGCTTGAAAGATTGCAACATTTTTGA

Coding sequence (CDS)

ATGCTTCCACCCCCAAAAAAAGTTTGGAATCGTTTTGCCTCTAAAGTCATTTTGAAGCTCGGCCGTGGTTTCTCGAAGCCATCGGAATCAATAACTCGAACGACACGGCGGTTTTTGAGTCGTCTCGGGTCTAGTGACTCCAGCGGAAGGCGGTGTTGCCGCTGCAGCTGCCACGACCAGCCCGAATATTGGCTCCAAGATCGTCCGAGTTTTGGGAATAATTGTAATACTAATTATTATATGGAAGTTGAATTTGAAAATGTAGAGGGGGAGGAATTGGAAGATGAAGCCGTGGATGAAAAGGCTGAGGAGTTTATTGCTAAGTTTCATGAATCTTTGAAGCTTGAAAGATTGCAACATTTTTGA

Protein sequence

MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQPEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEDEAVDEKAEEFIAKFHESLKLERLQHF
BLAST of CsaV3_7G019920 vs. NCBI nr
Match: KGN44055.1 (hypothetical protein Csa_7G145980 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 3.5e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0

Query: 1   MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQ 60
           MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQ
Sbjct: 1   MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQ 60

Query: 61  PEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEXXAVDEKAEEFIAKFHESLKLERLQH 120
           PEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEXXAVDEKAEEFIAKFHESLKLERLQH
Sbjct: 61  PEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEXXAVDEKAEEFIAKFHESLKLERLQH 120

Query: 121 F 122
           F
Sbjct: 121 F 121

BLAST of CsaV3_7G019920 vs. TrEMBL
Match: tr|A0A0A0K332|A0A0A0K332_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145980 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.3e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0

Query: 1   MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQ 60
           MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQ
Sbjct: 1   MLPPPKKVWNRFASKVILKLGRGFSKPSESITRTTRRFLSRLGSSDSSGRRCCRCSCHDQ 60

Query: 61  PEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEXXAVDEKAEEFIAKFHESLKLERLQH 120
           PEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEXXAVDEKAEEFIAKFHESLKLERLQH
Sbjct: 61  PEYWLQDRPSFGNNCNTNYYMEVEFENVEGEELEXXAVDEKAEEFIAKFHESLKLERLQH 120

Query: 121 F 122
           F
Sbjct: 121 F 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN44055.13.5e-62100.00hypothetical protein Csa_7G145980 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K332|A0A0A0K332_CUCSA2.3e-62100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145980 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G019920.1CsaV3_7G019920.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 95..119
e-value: 2.5E-10
score: 39.6

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G019920ClCG09G011040Watermelon (Charleston Gray)cucwcgB543
CsaV3_7G019920Lsi02G018850Bottle gourd (USVL1VR-Ls)cuclsiB547
CsaV3_7G019920Bhi09G001410Wax gourdcucwgoB723
The following gene(s) are paralogous to this gene:

None