CsaV3_7G012760 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G012760
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionEnhanced downy mildew 2, putative
Locationchr7 : 6993404 .. 6994030 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTAACTGCCATTTGTACTTCACATTTGGTTTGATGCCCTCACCCTTAAAAAATGAATTAAGGAATGACAACAGTTATAAACTTCCCTAAAGTGCACGCTTGCATGTTTGGTAAAGTGGATTTGTTTCTAAAATATTCTTTCTTTTAACCTAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGATGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGTAAGAAAATTATTAACTTTTGTATCCTTAAAGTGATCTCGTGGTTTCTTATCCCTTAATGGTCTACTGTTTTGGTTGTTAGGCTGTTCGAGCTGCTCTGCGCAAGCTTGATGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG

mRNA sequence

ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGATGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGATGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG

Coding sequence (CDS)

ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGATGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGATGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG

Protein sequence

MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKEDRSGMLLLDANSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLDEGCCIEDAEAVCEPEVLNHIFKWK
BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_008447701.2 (PREDICTED: LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 [Cucumis melo])

HSP 1 Score: 247.7 bits (631), Expect = 2.2e-62
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKEDRSGMLLLDANSERRLMDMMKNVASSI 60
           MDIDKTIKVKKSSLVGKSAIPTKRFD SKIYKEDRSGMLLLDA+SERRLMDMMKNVASSI
Sbjct: 535 MDIDKTIKVKKSSLVGKSAIPTKRFDQSKIYKEDRSGMLLLDADSERRLMDMMKNVASSI 594

Query: 61  TLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKL-DEGCCIEDAEAVC 120
           TLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKL +EGCCIEDAEAVC
Sbjct: 595 TLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLEEEGCCIEDAEAVC 654

Query: 121 EPEVLNHIFKWK 132
           EPEVLNHIFKWK
Sbjct: 655 EPEVLNHIFKWK 666

BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022981352.1 (protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981353.1 protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981354.1 protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981355.1 protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46
Identity = 107/148 (72.30%), Postives = 118/148 (79.73%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKED-----------------RSGMLLLDA 60
           MDIDKTIK KKSS+V KSA  TKR D +K  KED                  SGM+ LDA
Sbjct: 533 MDIDKTIKGKKSSVV-KSAASTKRSDQNKASKEDNSELGKSDTSKPLTKKLNSGMVQLDA 592

Query: 61  NSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAAL 120
           ++ERRLMD+MKNVASSITLEDV++KHKVPSTHAYSLK+VVDKTIKMGKLEGSV AVRAAL
Sbjct: 593 DTERRLMDLMKNVASSITLEDVVQKHKVPSTHAYSLKNVVDKTIKMGKLEGSVEAVRAAL 652

Query: 121 RKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           RKL+EGC IE+AEAVCEPEVL HIFKWK
Sbjct: 653 RKLEEGCSIEEAEAVCEPEVLYHIFKWK 679

BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022981356.1 (protein ENHANCED DOWNY MILDEW 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46
Identity = 107/148 (72.30%), Postives = 118/148 (79.73%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKED-----------------RSGMLLLDA 60
           MDIDKTIK KKSS+V KSA  TKR D +K  KED                  SGM+ LDA
Sbjct: 293 MDIDKTIKGKKSSVV-KSAASTKRSDQNKASKEDNSELGKSDTSKPLTKKLNSGMVQLDA 352

Query: 61  NSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAAL 120
           ++ERRLMD+MKNVASSITLEDV++KHKVPSTHAYSLK+VVDKTIKMGKLEGSV AVRAAL
Sbjct: 353 DTERRLMDLMKNVASSITLEDVVQKHKVPSTHAYSLKNVVDKTIKMGKLEGSVEAVRAAL 412

Query: 121 RKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           RKL+EGC IE+AEAVCEPEVL HIFKWK
Sbjct: 413 RKLEEGCSIEEAEAVCEPEVLYHIFKWK 439

BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022940346.1 (protein ENHANCED DOWNY MILDEW 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKED-----------------RSGMLLLDA 60
           MDIDKTIK KKSS+V K+A  TKR D +K  KED                  SGM+ LDA
Sbjct: 293 MDIDKTIKGKKSSVV-KAAASTKRSDQNKASKEDNSELGKSDASKPLTKKLNSGMVQLDA 352

Query: 61  NSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAAL 120
           ++ERRLMD+MKNVASSITLEDV++KHKVPSTHAYSLK+VVDKTIKMGKLEGSV AVRAAL
Sbjct: 353 DTERRLMDLMKNVASSITLEDVVQKHKVPSTHAYSLKNVVDKTIKMGKLEGSVEAVRAAL 412

Query: 121 RKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           RKL+EGC IE+AEAVCEPEVL HIFKWK
Sbjct: 413 RKLEEGCSIEEAEAVCEPEVLYHIFKWK 439

BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022940341.1 (protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_022940342.1 protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_022940343.1 protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_022940344.1 protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKED-----------------RSGMLLLDA 60
           MDIDKTIK KKSS+V K+A  TKR D +K  KED                  SGM+ LDA
Sbjct: 534 MDIDKTIKGKKSSVV-KAAASTKRSDQNKASKEDNSELGKSDASKPLTKKLNSGMVQLDA 593

Query: 61  NSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAAL 120
           ++ERRLMD+MKNVASSITLEDV++KHKVPSTHAYSLK+VVDKTIKMGKLEGSV AVRAAL
Sbjct: 594 DTERRLMDLMKNVASSITLEDVVQKHKVPSTHAYSLKNVVDKTIKMGKLEGSVEAVRAAL 653

Query: 121 RKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           RKL+EGC IE+AEAVCEPEVL HIFKWK
Sbjct: 654 RKLEEGCSIEEAEAVCEPEVLYHIFKWK 680

BLAST of CsaV3_7G012760 vs. TAIR10
Match: AT5G55390.1 (ENHANCED DOWNY MILDEW 2)

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0

Query: 32  KEDRSGMLLLDANSERRLMDMMKNVASSITLEDVIKKHKVPST-HAYSLKHVVDKTIKMG 91
           KE  S +  LD +S+RRL+ +MK     IT+  ++KK K+ ST   +S ++VVDKTI MG
Sbjct: 589 KEPGSEIPTLDNDSQRRLLAVMKKATEEITMGTILKKFKIQSTMSTHSTRNVVDKTITMG 648

Query: 92  KLEGSVVAVRAALRKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           K+EGSV A+R AL+KL+EG  IEDA+AVCEPEVL+ I KWK
Sbjct: 649 KVEGSVQAIRTALKKLEEGGNIEDAKAVCEPEVLSQILKWK 689

BLAST of CsaV3_7G012760 vs. Swiss-Prot
Match: sp|F4K3G5|EDM2_ARATH (Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana OX=3702 GN=EDM2 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-22
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0

Query: 32  KEDRSGMLLLDANSERRLMDMMKNVASSITLEDVIKKHKVPST-HAYSLKHVVDKTIKMG 91
           KE  S +  LD +S+RRL+ +MK     IT+  ++KK K+ ST   +S ++VVDKTI MG
Sbjct: 589 KEPGSEIPTLDNDSQRRLLAVMKKATEEITMGTILKKFKIQSTMSTHSTRNVVDKTITMG 648

Query: 92  KLEGSVVAVRAALRKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           K+EGSV A+R AL+KL+EG  IEDA+AVCEPEVL+ I KWK
Sbjct: 649 KVEGSVQAIRTALKKLEEGGNIEDAKAVCEPEVLSQILKWK 689

BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A1S3BHF3|A0A1S3BHF3_CUCME (LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo OX=3656 GN=LOC103490112 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-62
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKEDRSGMLLLDANSERRLMDMMKNVASSI 60
           MDIDKTIKVKKSSLVGKSAIPTKRFD SKIYKEDRSGMLLLDA+SERRLMDMMKNVASSI
Sbjct: 535 MDIDKTIKVKKSSLVGKSAIPTKRFDQSKIYKEDRSGMLLLDADSERRLMDMMKNVASSI 594

Query: 61  TLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKL-DEGCCIEDAEAVC 120
           TLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKL +EGCCIEDAEAVC
Sbjct: 595 TLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLEEEGCCIEDAEAVC 654

Query: 121 EPEVLNHIFKWK 132
           EPEVLNHIFKWK
Sbjct: 655 EPEVLNHIFKWK 666

BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A061FCK2|A0A061FCK2_THECC (Enhanced downy mildew 2, putative OS=Theobroma cacao OX=3641 GN=TCM_030759 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 72/100 (72.00%), Postives = 83/100 (83.00%), Query Frame = 0

Query: 32  KEDRSGMLLLDANSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGK 91
           K+  SGM  LDA+SERRL  +MK V SSITLED+I KHKVPSTHAYS K VVD+TI +GK
Sbjct: 585 KKMSSGMPSLDADSERRLFALMKEVESSITLEDIIAKHKVPSTHAYSSKSVVDRTITLGK 644

Query: 92  LEGSVVAVRAALRKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
           +EGSV AVR AL KL++GC IEDA+AVCEPEVLN IFKW+
Sbjct: 645 IEGSVDAVRMALAKLEDGCNIEDAQAVCEPEVLNQIFKWQ 684

BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A2C9UFF5|A0A2C9UFF5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G064900 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28
Identity = 75/146 (51.37%), Postives = 97/146 (66.44%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGK-SAIPTKRFDPSKIYKEDR--------------SGMLLLDANS 60
           +D   T  V K SL  +  ++ TKR    K+ K+D               S +  LDA +
Sbjct: 564 VDRSATTTVNKMSLGDRLYSLMTKRSGQGKLQKQDEDKSVTVKTSARKLSSEIPALDAET 623

Query: 61  ERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRK 120
           E+R++ ++K  ASSITL+DV KKH+VPSTHAYS K VVDKTI  GK+EG+V AVR ALRK
Sbjct: 624 EKRILALIKESASSITLDDVKKKHEVPSTHAYSSKTVVDKTITAGKVEGTVEAVRTALRK 683

Query: 121 LDEGCCIEDAEAVCEPEVLNHIFKWK 132
           L++GC  EDA+AVCEPEVLN +F+WK
Sbjct: 684 LEDGCSTEDAKAVCEPEVLNQVFRWK 709

BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A2C9UEM6|A0A2C9UEM6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G064900 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28
Identity = 75/146 (51.37%), Postives = 97/146 (66.44%), Query Frame = 0

Query: 1   MDIDKTIKVKKSSLVGK-SAIPTKRFDPSKIYKEDR--------------SGMLLLDANS 60
           +D   T  V K SL  +  ++ TKR    K+ K+D               S +  LDA +
Sbjct: 546 VDRSATTTVNKMSLGDRLYSLMTKRSGQGKLQKQDEDKSVTVKTSARKLSSEIPALDAET 605

Query: 61  ERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRK 120
           E+R++ ++K  ASSITL+DV KKH+VPSTHAYS K VVDKTI  GK+EG+V AVR ALRK
Sbjct: 606 EKRILALIKESASSITLDDVKKKHEVPSTHAYSSKTVVDKTITAGKVEGTVEAVRTALRK 665

Query: 121 LDEGCCIEDAEAVCEPEVLNHIFKWK 132
           L++GC  EDA+AVCEPEVLN +F+WK
Sbjct: 666 LEDGCSTEDAKAVCEPEVLNQVFRWK 691

BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A251PPL0|A0A251PPL0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G227500 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.9e-28
Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0

Query: 41  LDANSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVR 100
           LDA SERRL+ +MK+ ASS  LEDVI+KHKVPSTHA+S K+ V++ I +GK+EGSV A+R
Sbjct: 593 LDAASERRLLALMKDAASSTPLEDVIRKHKVPSTHAFSSKNAVERNITLGKVEGSVEAIR 652

Query: 101 AALRKLDEGCCIEDAEAVCEPEVLNHIFKWK 132
            ALRKL+EGC IED+EAVC PE+LN IFKWK
Sbjct: 653 TALRKLEEGCSIEDSEAVCAPEILNQIFKWK 683

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008447701.22.2e-6296.97PREDICTED: LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 [Cucumis melo][more]
XP_022981352.16.5e-4672.30protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981353.1 pr... [more]
XP_022981356.16.5e-4672.30protein ENHANCED DOWNY MILDEW 2 isoform X2 [Cucurbita maxima][more]
XP_022940346.11.5e-4571.62protein ENHANCED DOWNY MILDEW 2-like isoform X2 [Cucurbita moschata][more]
XP_022940341.11.5e-4571.62protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_0229403... [more]
Match NameE-valueIdentityDescription
AT5G55390.11.9e-2355.45ENHANCED DOWNY MILDEW 2[more]
Match NameE-valueIdentityDescription
sp|F4K3G5|EDM2_ARATH3.4e-2255.45Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana OX=3702 GN=EDM2 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BHF3|A0A1S3BHF3_CUCME1.5e-6296.97LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A061FCK2|A0A061FCK2_THECC1.1e-3072.00Enhanced downy mildew 2, putative OS=Theobroma cacao OX=3641 GN=TCM_030759 PE=4 ... [more]
tr|A0A2C9UFF5|A0A2C9UFF5_MANES5.3e-2851.37Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G064900 PE=4 SV=... [more]
tr|A0A2C9UEM6|A0A2C9UEM6_MANES5.3e-2851.37Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G064900 PE=4 SV=... [more]
tr|A0A251PPL0|A0A251PPL0_PRUPE6.9e-2869.23Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G227500 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G012760.1CsaV3_7G012760.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22884SET DOMAIN PROTEINScoord: 29..131
NoneNo IPR availablePANTHERPTHR22884:SF395PROTEIN ENHANCED DOWNY MILDEW 2coord: 29..131

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G012760MELO3C013108Melon (DHL92) v3.5.1cucmeB544
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None