CsaV3_7G012760 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTAACTGCCATTTGTACTTCACATTTGGTTTGATGCCCTCACCCTTAAAAAATGAATTAAGGAATGACAACAGTTATAAACTTCCCTAAAGTGCACGCTTGCATGTTTGGTAAAGTGGATTTGTTTCTAAAATATTCTTTCTTTTAACCTAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGATGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGTAAGAAAATTATTAACTTTTGTATCCTTAAAGTGATCTCGTGGTTTCTTATCCCTTAATGGTCTACTGTTTTGGTTGTTAGGCTGTTCGAGCTGCTCTGCGCAAGCTTGATGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGATGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGATGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGATGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGATGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKEDRSGMLLLDANSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLDEGCCIEDAEAVCEPEVLNHIFKWK
BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_008447701.2 (PREDICTED: LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 [Cucumis melo]) HSP 1 Score: 247.7 bits (631), Expect = 2.2e-62 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022981352.1 (protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981353.1 protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981354.1 protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima] >XP_022981355.1 protein ENHANCED DOWNY MILDEW 2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46 Identity = 107/148 (72.30%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022981356.1 (protein ENHANCED DOWNY MILDEW 2 isoform X2 [Cucurbita maxima]) HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46 Identity = 107/148 (72.30%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022940346.1 (protein ENHANCED DOWNY MILDEW 2-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. NCBI nr
Match: XP_022940341.1 (protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_022940342.1 protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_022940343.1 protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata] >XP_022940344.1 protein ENHANCED DOWNY MILDEW 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45 Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. TAIR10
Match: AT5G55390.1 (ENHANCED DOWNY MILDEW 2) HSP 1 Score: 105.9 bits (263), Expect = 1.9e-23 Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. Swiss-Prot
Match: sp|F4K3G5|EDM2_ARATH (Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana OX=3702 GN=EDM2 PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.4e-22 Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A1S3BHF3|A0A1S3BHF3_CUCME (LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo OX=3656 GN=LOC103490112 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.5e-62 Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A061FCK2|A0A061FCK2_THECC (Enhanced downy mildew 2, putative OS=Theobroma cacao OX=3641 GN=TCM_030759 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30 Identity = 72/100 (72.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A2C9UFF5|A0A2C9UFF5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G064900 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28 Identity = 75/146 (51.37%), Postives = 97/146 (66.44%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A2C9UEM6|A0A2C9UEM6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G064900 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.3e-28 Identity = 75/146 (51.37%), Postives = 97/146 (66.44%), Query Frame = 0
BLAST of CsaV3_7G012760 vs. TrEMBL
Match: tr|A0A251PPL0|A0A251PPL0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G227500 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 6.9e-28 Identity = 63/91 (69.23%), Postives = 77/91 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |