CsaV3_7G009940 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G009940
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transcription factor PCL1
Location	chr7 : 5599626 .. 5600519 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAAGAAGAGGGAATTCCAATTCGGCGGTGGTAATGGTTGTAGAAATGAGGATGAAAGAGTTCTTCTATGGGAGGATGGGCTGCCGGATGTTGAGAAATTAACCCCTCTTTCTCAATCGTTAATATCGCAGGAACTCGCTTCCGCGTTTAGGATTTTGATGGAACCTCATCGGAGTATATTAGATGTTAATTCGGCATCGAAGATGACGATATTGAATATTCGTGATGGACAGTCAGAAGGATACAGGAGTTTTGAGTTTAAGTACGATCAGACGCGGAGGGAAGACGTTGTGATGGTTGAATCAGACGAGGGGATAAATCCAGATGATTTGGGATCTGATTCGCGGAAATTGAGGAGGGTTGATTGTGTTGAGGAGACGAATTTAGCACCTCGAGCGGAGAGTTTGATTGAGGATGCAGCATTGGCTCGAACCTTGAAGCGACCTAGGCTCGCGTGGACTCCACAATTACACAAACGGTTCGTGGATGTGGTTTCTCACCTAGGGCTTAAAGACGCAGCTCCCAAAGCTATTATGCAAATGATGAATGTGGAGGGATTGACTCGTGAAAATGTTGCTAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACGCAGATTTCTTCAACAACTGATGAAGCTCTTGTTCCGATGCCCGTAACGCAGAATGCTCACGATTCTTCTCCCGGTGCCGCCGATTCACACGGAAACGACTATTTTCCGGCTACTTTTCCAGTGACTTATATGCCATCTCCGATGATGCCTATGATGTTTTATGGTATGGGAGCTCACGGCCATGGTCTTAGTCAAACCGCCATGCCAATGGTTAACCTAACCAATGTACCTACTCATTCGTGTAGCACGAAAGGGCAGCATGATTTATAG

mRNA sequence

ATGGAGAAGAAGAAGAGGGAATTCCAATTCGGCGGTGGTAATGGTTGTAGAAATGAGGATGAAAGAGTTCTTCTATGGGAGGATGGGCTGCCGGATGTTGAGAAATTAACCCCTCTTTCTCAATCGTTAATATCGCAGGAACTCGCTTCCGCGTTTAGGATTTTGATGGAACCTCATCGGAGTATATTAGATGTTAATTCGGCATCGAAGATGACGATATTGAATATTCGTGATGGACAGTCAGAAGGATACAGGAGTTTTGAGTTTAAGTACGATCAGACGCGGAGGGAAGACGTTGTGATGGTTGAATCAGACGAGGGGATAAATCCAGATGATTTGGGATCTGATTCGCGGAAATTGAGGAGGGTTGATTGTGTTGAGGAGACGAATTTAGCACCTCGAGCGGAGAGTTTGATTGAGGATGCAGCATTGGCTCGAACCTTGAAGCGACCTAGGCTCGCGTGGACTCCACAATTACACAAACGGTTCGTGGATGTGGTTTCTCACCTAGGGCTTAAAGACGCAGCTCCCAAAGCTATTATGCAAATGATGAATGTGGAGGGATTGACTCGTGAAAATGTTGCTAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACGCAGATTTCTTCAACAACTGATGAAGCTCTTGTTCCGATGCCCGTAACGCAGAATGCTCACGATTCTTCTCCCGGTGCCGCCGATTCACACGGAAACGACTATTTTCCGGCTACTTTTCCAGTGACTTATATGCCATCTCCGATGATGCCTATGATGTTTTATGGTATGGGAGCTCACGGCCATGGTCTTAGTCAAACCGCCATGCCAATGGTTAACCTAACCAATGTACCTACTCATTCGTGTAGCACGAAAGGGCAGCATGATTTATAG

Coding sequence (CDS)

ATGGAGAAGAAGAAGAGGGAATTCCAATTCGGCGGTGGTAATGGTTGTAGAAATGAGGATGAAAGAGTTCTTCTATGGGAGGATGGGCTGCCGGATGTTGAGAAATTAACCCCTCTTTCTCAATCGTTAATATCGCAGGAACTCGCTTCCGCGTTTAGGATTTTGATGGAACCTCATCGGAGTATATTAGATGTTAATTCGGCATCGAAGATGACGATATTGAATATTCGTGATGGACAGTCAGAAGGATACAGGAGTTTTGAGTTTAAGTACGATCAGACGCGGAGGGAAGACGTTGTGATGGTTGAATCAGACGAGGGGATAAATCCAGATGATTTGGGATCTGATTCGCGGAAATTGAGGAGGGTTGATTGTGTTGAGGAGACGAATTTAGCACCTCGAGCGGAGAGTTTGATTGAGGATGCAGCATTGGCTCGAACCTTGAAGCGACCTAGGCTCGCGTGGACTCCACAATTACACAAACGGTTCGTGGATGTGGTTTCTCACCTAGGGCTTAAAGACGCAGCTCCCAAAGCTATTATGCAAATGATGAATGTGGAGGGATTGACTCGTGAAAATGTTGCTAGTCATCTTCAGAAGTATCGACTTTACTTGAAGAGGACGCAGATTTCTTCAACAACTGATGAAGCTCTTGTTCCGATGCCCGTAACGCAGAATGCTCACGATTCTTCTCCCGGTGCCGCCGATTCACACGGAAACGACTATTTTCCGGCTACTTTTCCAGTGACTTATATGCCATCTCCGATGATGCCTATGATGTTTTATGGTATGGGAGCTCACGGCCATGGTCTTAGTCAAACCGCCATGCCAATGGTTAACCTAACCAATGTACCTACTCATTCGTGTAGCACGAAAGGGCAGCATGATTTATAG

Protein sequence

MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL

Homology

[Close]

BLAST of CsaV3_7G009940 vs. NCBI nr
Match: XP_004143206.1 (PREDICTED: transcription factor PCL1-like [Cucumis sativus] >KGN47131.1 hypothetical protein Csa_6G190220 [Cucumis sativus])

HSP 1 Score: 595.9 bits (1535), Expect = 7.6e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60
           MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR
Sbjct: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60

Query: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120
           SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL
Sbjct: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120

Query: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180
           RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI
Sbjct: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180

Query: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240
           MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN
Sbjct: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240

Query: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 298
           DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL
Sbjct: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 297

[Close]

BLAST of CsaV3_7G009940 vs. NCBI nr
Match: XP_008464103.1 (PREDICTED: transcription factor PCL1 [Cucumis melo])

HSP 1 Score: 582.4 bits (1500), Expect = 8.7e-163
Identity = 290/297 (97.64%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60
           MEKKKREFQFGGGNGC NEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR
Sbjct: 1   MEKKKREFQFGGGNGCGNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60

Query: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120
           SILDVNSASKMTI+NIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL
Sbjct: 61  SILDVNSASKMTIMNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120

Query: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180
           RRVDCVEETN+APRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI
Sbjct: 121 RRVDCVEETNIAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180

Query: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240
           MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSP AADSHGN
Sbjct: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPSAADSHGN 240

Query: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 298
           D FPATFP+TYMP PMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL
Sbjct: 241 DCFPATFPMTYMPFPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 297

[Close]

BLAST of CsaV3_7G009940 vs. NCBI nr
Match: XP_022947291.1 (transcription factor PCL1-like [Cucurbita moschata])

HSP 1 Score: 479.2 bits (1232), Expect = 1.0e-131
Identity = 240/296 (81.08%), Postives = 264/296 (89.19%), Query Frame = 0


Query: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60
           ME+KKRE+   GG+GC N DERVLLWE+GLPD ++LTPLSQSLI QELASAFRILMEP R
Sbjct: 1   MEQKKREYHANGGSGCMNGDERVLLWEEGLPDADRLTPLSQSLIPQELASAFRILMEPRR 60

Query: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120
           S  DV SASK TILNIRDGQ EGYRSFEF   +TR ED +MVESDE ++PD+LGSDSR L
Sbjct: 61  SKSDVYSASKTTILNIRDGQLEGYRSFEFNDGRTRGEDALMVESDEAVDPDELGSDSRNL 120

Query: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180
           R+VD V E NLAPRAE+LIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI
Sbjct: 121 RKVDFVGEANLAPRAENLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180

Query: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240
           M++MNV+GLTRENVASHLQKYRLYLKRTQISSTTDEALVPMP+TQN+HDSSP +ADSHGN
Sbjct: 181 MRLMNVDGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPMTQNSHDSSP-SADSHGN 240

Query: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHD 297
            Y PATFP+TYMPSPMMPMM YGMGAHGHGL+ T MPM+N+  VPTHSCST+ QHD
Sbjct: 241 MYLPATFPMTYMPSPMMPMMLYGMGAHGHGLNDTGMPMMNMCAVPTHSCSTQEQHD 295

[Close]

BLAST of CsaV3_7G009940 vs. NCBI nr
Match: XP_023511812.1 (transcription factor PCL1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470.3 bits (1209), Expect = 4.8e-129
Identity = 238/294 (80.95%), Postives = 255/294 (86.73%), Query Frame = 0


Query: 3   KKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSI 62
           +K RE +FG GNGC N DERV  WEDGLPD EKLTPLSQSL+SQELASAFRILMEPHRSI
Sbjct: 2   EKNRECRFGDGNGCINGDERVFQWEDGLPDTEKLTPLSQSLVSQELASAFRILMEPHRSI 61

Query: 63  LDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRR 122
            DV SASK TILNI DGQSEGYR FE  YDQTR ED  M+ESDE IN D+LGSDSRKLRR
Sbjct: 62  SDVKSASKTTILNICDGQSEGYRGFELNYDQTRGEDAAMIESDEVINVDELGSDSRKLRR 121

Query: 123 VDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ 182
           +DC +E N APR ESLIEDAALARTLKRPR+AWTPQLHKRFVDVVSHLGLK+AAPKAIM+
Sbjct: 122 IDCFKEANSAPRGESLIEDAALARTLKRPRVAWTPQLHKRFVDVVSHLGLKEAAPKAIMR 181

Query: 183 MMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGNDY 242
           +MNVEGLTRENVASHLQKYRLYLKRTQ SSTTDEA      TQN+HDS+P +ADS GN Y
Sbjct: 182 LMNVEGLTRENVASHLQKYRLYLKRTQPSSTTDEA------TQNSHDSAP-SADSQGNGY 241

Query: 243 FPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHD 297
           FP+TFP+TY PSPMMPMMFY MGAHGHGLS T MPMVNL+ VPTHSCSTKGQHD
Sbjct: 242 FPSTFPMTYAPSPMMPMMFYSMGAHGHGLSHTGMPMVNLSTVPTHSCSTKGQHD 288

[Close]

BLAST of CsaV3_7G009940 vs. NCBI nr
Match: XP_023007011.1 (transcription factor PCL1-like [Cucurbita maxima])

HSP 1 Score: 465.3 bits (1196), Expect = 1.5e-127
Identity = 236/297 (79.46%), Postives = 258/297 (86.87%), Query Frame = 0


Query: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60
           ME+KKRE+   GG+GC N DERVLLWE+GLPD ++LTPLSQSLI QELASAFRILMEP R
Sbjct: 1   MEQKKREYHANGGSGCMNGDERVLLWEEGLPDADRLTPLSQSLIPQELASAFRILMEPRR 60

Query: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120
           S  DV SASK TILNIRDGQ EGYRSFEF   +TR ED +MVESDE ++PD+LGSDSR L
Sbjct: 61  SKSDVYSASKTTILNIRDGQLEGYRSFEFNDGRTRGEDALMVESDEAVDPDELGSDSRNL 120

Query: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180
           R+VD V E NL PRAE+LIEDA LARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI
Sbjct: 121 RKVDFVGEANLVPRAENLIEDATLARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180

Query: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240
           M++MNV+GLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPV QN+HDSSP +ADSHGN
Sbjct: 181 MRLMNVDGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVPQNSHDSSP-SADSHGN 240

Query: 241 DYFPATFPVTYMPSPMMPMMFYGMGA-HGHGLSQTAMPMVNLTNVPTHSCSTKGQHD 297
            Y PATFP+ YMPSPMMPMM YGMGA HGHGL+ T MPM N+  VPT SCST+ QHD
Sbjct: 241 TYLPATFPMIYMPSPMMPMMLYGMGAHHGHGLNDTGMPMTNMCAVPTRSCSTQEQHD 296

[Close]

BLAST of CsaV3_7G009940 vs. TAIR10
Match: AT5G59570.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 162.2 bits (409), Expect = 5.1e-40
Identity = 115/272 (42.28%), Postives = 151/272 (55.51%), Query Frame = 0


Query: 11  GGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASK 70
           GGG     ++ R+  WE GLP+ + LTPLSQ L+   LA AF ++ E  R+I DVN AS+
Sbjct: 19  GGG-----DEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQ 78

Query: 71  MTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVE--- 130
           +T+ ++R                +     VM E  + +     GSD +K ++ D  E   
Sbjct: 79  ITLSSLR---------------SSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGEAAA 138

Query: 131 -ETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNV 190
            E + A   +S  EDA+  +T KRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQ+MNV
Sbjct: 139 VEDSTAEEGDSGPEDAS-GKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 198

Query: 191 EGLTRENVASHLQKYRLYLKRTQ-------ISSTTDEALVPMPVTQNAHDSSPGAADSHG 250
           EGLTRENVASHLQKYRLYLKR Q         S++D+     PV   +     G   S+G
Sbjct: 199 EGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSSTPVPPQSFQDGGG---SNG 258

Query: 251 NDYFPATFPVTYMPSPMMPMMFYG--MGAHGH 270
               P   P       M+P+  YG  MG  G+
Sbjct: 259 KLGVPVPVP------SMVPIPGYGNQMGMQGY 260

[Close]

BLAST of CsaV3_7G009940 vs. TAIR10
Match: AT3G46640.3 (Homeodomain-like superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 103/249 (41.37%), Postives = 119/249 (47.79%), Query Frame = 0


Query: 19  EDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIRD 78
           + +RV  WE GLP  E L  LS SLI   LA AF I  E  R+I DVN AS+ T L+   
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASE-TTLSXXX 74

Query: 79  GQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESL 138
                                                           +    A   +S 
Sbjct: 75  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAMAAEEGDSG 134

Query: 139 IEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHL 198
            ED +  +TLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQ+MNVEGLTRENVASHL
Sbjct: 135 TEDLS-GKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHL 194

Query: 199 QKYRLYLKRTQ-----ISSTTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATFPVTYMP 258
           QKYRLYLKR Q       S +D+     PV   +     G   S GN   P   P  Y  
Sbjct: 195 QKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVP--IPGAYGT 254

Query: 259 SPMMPMMFY 263
             MM M  Y
Sbjct: 255 QQMMQMPVY 259

[Close]

BLAST of CsaV3_7G009940 vs. TAIR10
Match: AT3G10760.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 2.6e-28
Identity = 97/238 (40.76%), Postives = 112/238 (47.06%), Query Frame = 0


Query: 26  WEDGLPDVEKLTPLSQSLISQELASAFRILMEPH-------RSILDVNSASKMTILNIRD 85
           WE+ LP  E+L P+SQSLIS +LA AF I    H                          
Sbjct: 12  WEEELPSPEELMPISQSLISPDLALAFDIRTPNHXXXXXXXXXXXXXXXXXXXXXXXXXX 71

Query: 86  GQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESL 145
             S+   S EF  D                   DLGS                A   E  
Sbjct: 72  XSSQANSSAEFAADSA-----------------DLGSGG--------------AAGDEP- 131

Query: 146 IEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHL 205
                 ARTLKRPRL WTPQLHKRFVD V+HLG+K+A PK IMQ+M+V+GLTRENVASHL
Sbjct: 132 ------ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHL 191

Query: 206 QKYRLYLKRTQ-ISS--------TTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATF 248
           QKYRLYLKR Q +SS         TD      PV   AH   P    S  +D+F  +F
Sbjct: 192 QKYRLYLKRMQGLSSGGGAGSDPATDRLFASSPVP--AHFLHPNRVPS--SDHFMPSF 207

[Close]

BLAST of CsaV3_7G009940 vs. TAIR10
Match: AT2G40970.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 95/258 (36.82%), Postives = 116/258 (44.96%), Query Frame = 0


Query: 24  LLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIRDGQSEG 83
           L WE+ LP  E+L P+SQ+LI+  LA AF+I    H      +  SK T           
Sbjct: 10  LRWEEELPSPEELIPISQTLITPHLALAFQIGSPNH------HLGSKRTTAIYHQKLXXX 69

Query: 84  YRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESLIEDAA 143
                                 +     DLGS S                          
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXXDS---TDLGSGS----------------------IGGE 129

Query: 144 LARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRL 203
            ARTLKRPRL WTPQLHKRFVD V HLG+K+A PK IMQ+M+VEGLTRENVASHLQKYRL
Sbjct: 130 PARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRL 189

Query: 204 YLKRTQISS----TTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATFPVTYM------- 263
           YL+R Q  +    T    +V    T     SSP  A     DY       +YM       
Sbjct: 190 YLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVPAHFLSPDYLMPPLEHSYMGKHVITQ 236

Query: 264 PSPMMPMMFYGMGAHGHG 271
            + ++  + Y    +GHG
Sbjct: 250 QNQVVRNLRYEDSEYGHG 236

[Close]

BLAST of CsaV3_7G009940 vs. TAIR10
Match: AT5G05090.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 114.8 bits (286), Expect = 9.3e-26
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 145 ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRLY 204
           ARTLKRPRL WTPQLHKRFVD V+HLG+K+A PK IMQ+M+V+GLTRENVASHLQKYRLY
Sbjct: 76  ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLY 135

Query: 205 LKR 208
           LKR
Sbjct: 136 LKR 138

[Close]

BLAST of CsaV3_7G009940 vs. Swiss-Prot
Match: sp|Q9LTH4|PCLL_ARATH (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.2e-39
Identity = 115/272 (42.28%), Postives = 151/272 (55.51%), Query Frame = 0


Query: 11  GGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASK 70
           GGG     ++ R+  WE GLP+ + LTPLSQ L+   LA AF ++ E  R+I DVN AS+
Sbjct: 19  GGG-----DEYRIPEWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQ 78

Query: 71  MTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVE--- 130
           +T+ ++R                +     VM E  + +     GSD +K ++ D  E   
Sbjct: 79  ITLSSLR---------------SSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGEAAA 138

Query: 131 -ETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNV 190
            E + A   +S  EDA+  +T KRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQ+MNV
Sbjct: 139 VEDSTAEEGDSGPEDAS-GKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNV 198

Query: 191 EGLTRENVASHLQKYRLYLKRTQ-------ISSTTDEALVPMPVTQNAHDSSPGAADSHG 250
           EGLTRENVASHLQKYRLYLKR Q         S++D+     PV   +     G   S+G
Sbjct: 199 EGLTRENVASHLQKYRLYLKRIQGLTTEEDPYSSSDQLFSSTPVPPQSFQDGGG---SNG 258

Query: 251 NDYFPATFPVTYMPSPMMPMMFYG--MGAHGH 270
               P   P       M+P+  YG  MG  G+
Sbjct: 259 KLGVPVPVP------SMVPIPGYGNQMGMQGY 260

[Close]

BLAST of CsaV3_7G009940 vs. Swiss-Prot
Match: sp|Q9SNB4|PCL1_ARATH (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-33
Identity = 103/249 (41.37%), Postives = 119/249 (47.79%), Query Frame = 0


Query: 19  EDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIRD 78
           + +RV  WE GLP  E L  LS SLI   LA AF I  E  R+I DVN AS+ T L+   
Sbjct: 15  DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASE-TTLSXXX 74

Query: 79  GQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESL 138
                                                           +    A   +S 
Sbjct: 75  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAMAAEEGDSG 134

Query: 139 IEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHL 198
            ED +  +TLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQ+MNVEGLTRENVASHL
Sbjct: 135 TEDLS-GKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHL 194

Query: 199 QKYRLYLKRTQ-----ISSTTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATFPVTYMP 258
           QKYRLYLKR Q       S +D+     PV   +     G   S GN   P   P  Y  
Sbjct: 195 QKYRLYLKRMQGLTNEGPSASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVP--IPGAYGT 254

Query: 259 SPMMPMMFY 263
             MM M  Y
Sbjct: 255 QQMMQMPVY 259

[Close]

BLAST of CsaV3_7G009940 vs. Swiss-Prot
Match: sp|Q94DH3|PCL1_ORYSJ (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-30
Identity = 92/237 (38.82%), Postives = 112/237 (47.26%), Query Frame = 0


Query: 2   EKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRS 61
           E+   E++ GGG     EDERV+ WE GLP  ++LTPLSQ L+   LA+AFRI  EP R+
Sbjct: 3   EEAPEEYELGGG-----EDERVMEWETGLPGADELTPLSQPLVPAGLAAAFRIPPEPGRT 62

Query: 62  ILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLR 121
           +LDV+ AS  T+                                                
Sbjct: 63  LLDVHRASAATV----------------------------SRXXXXXXXXXXXXXXXXXX 122

Query: 122 RVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIM 181
                                         RL WTPQLHKRFV+VV+HLG+K+A PK IM
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLVWTPQLHKRFVEVVAHLGMKNAVPKTIM 182

Query: 182 QMMNVEGLTRENVASHLQKYRLYLKRTQ-----ISSTTDEALVPMPVTQ-NAHDSSP 233
           Q+MNVEGLTRENVASHLQKYRLY+KR Q       S +D      PV   + HD  P
Sbjct: 183 QLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSPSDHIFASTPVPHASLHDQVP 206

[Close]

BLAST of CsaV3_7G009940 vs. Swiss-Prot
Match: sp|O22210|MYBC1_ARATH (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.3e-26
Identity = 95/258 (36.82%), Postives = 116/258 (44.96%), Query Frame = 0


Query: 24  LLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIRDGQSEG 83
           L WE+ LP  E+L P+SQ+LI+  LA AF+I    H      +  SK T           
Sbjct: 10  LRWEEELPSPEELIPISQTLITPHLALAFQIGSPNH------HLGSKRTTAIYHQKLXXX 69

Query: 84  YRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESLIEDAA 143
                                 +     DLGS S                          
Sbjct: 70  XXXXXXXXXXXXXXXXXXXXXXDS---TDLGSGS----------------------IGGE 129

Query: 144 LARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRL 203
            ARTLKRPRL WTPQLHKRFVD V HLG+K+A PK IMQ+M+VEGLTRENVASHLQKYRL
Sbjct: 130 PARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRL 189

Query: 204 YLKRTQISS----TTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATFPVTYM------- 263
           YL+R Q  +    T    +V    T     SSP  A     DY       +YM       
Sbjct: 190 YLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVPAHFLSPDYLMPPLEHSYMGKHVITQ 236

Query: 264 PSPMMPMMFYGMGAHGHG 271
            + ++  + Y    +GHG
Sbjct: 250 QNQVVRNLRYEDSEYGHG 236

[Close]

BLAST of CsaV3_7G009940 vs. Swiss-Prot
Match: sp|B8AEH1|ORR23_ORYSI (Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN=RR23 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-17
Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 109 NPDDLGSDSRKLRRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVS 168
           +PD  G  S+K R+  C EE +        I+D +     K+PR+ W+ +LH++FV  V+
Sbjct: 177 SPDQSGRPSKK-RKEYCSEEEDEGEVNTQDIDDPSAP---KKPRVVWSVELHRKFVAAVN 236

Query: 169 HLGLKDAAPKAIMQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALV 220
            LG+  A PK I+++MNVE LTRENVASHLQKYRLYLKR    ++   ++V
Sbjct: 237 QLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLSAVASQQVSIV 283

[Close]

BLAST of CsaV3_7G009940 vs. TrEMBL
Match: tr|A0A0A0KH89|A0A0A0KH89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190220 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 5.0e-167
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60
           MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR
Sbjct: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60

Query: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120
           SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL
Sbjct: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120

Query: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180
           RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI
Sbjct: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180

Query: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240
           MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN
Sbjct: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240

Query: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 298
           DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL
Sbjct: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 297

[Close]

BLAST of CsaV3_7G009940 vs. TrEMBL
Match: tr|A0A1S3CKP6|A0A1S3CKP6_CUCME (transcription factor PCL1 OS=Cucumis melo OX=3656 GN=LOC103502064 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 5.7e-163
Identity = 290/297 (97.64%), Postives = 293/297 (98.65%), Query Frame = 0


Query: 1   MEKKKREFQFGGGNGCRNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60
           MEKKKREFQFGGGNGC NEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR
Sbjct: 1   MEKKKREFQFGGGNGCGNEDERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHR 60

Query: 61  SILDVNSASKMTILNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120
           SILDVNSASKMTI+NIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL
Sbjct: 61  SILDVNSASKMTIMNIRDGQSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKL 120

Query: 121 RRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180
           RRVDCVEETN+APRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI
Sbjct: 121 RRVDCVEETNIAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAI 180

Query: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPGAADSHGN 240
           MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSP AADSHGN
Sbjct: 181 MQMMNVEGLTRENVASHLQKYRLYLKRTQISSTTDEALVPMPVTQNAHDSSPSAADSHGN 240

Query: 241 DYFPATFPVTYMPSPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 298
           D FPATFP+TYMP PMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL
Sbjct: 241 DCFPATFPMTYMPFPMMPMMFYGMGAHGHGLSQTAMPMVNLTNVPTHSCSTKGQHDL 297

[Close]

BLAST of CsaV3_7G009940 vs. TrEMBL
Match: tr|A0A0A0LXF6|A0A0A0LXF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524660 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 134/242 (55.37%), Postives = 167/242 (69.01%), Query Frame = 0


Query: 2   EKKKREFQFGGGNGCRNE----DERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILME 61
           E K  E++ GGG G  +E    +ERV  WE GLPD + LTPLSQ+LI  ELASAF I   
Sbjct: 4   EVKMAEYESGGGVGGEDESCAHEERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTG 63

Query: 62  PHRSILDVNSASKMTILNIRDGQSEGYRSFEFKY---DQTRREDVVMVESDEGINPDDLG 121
           P R+++DVN AS+ T+ N+R  Q++ + S  FK    D+T+  D ++VE DE     D G
Sbjct: 64  PCRTLMDVNRASQNTLSNLRGFQAQAFSSNNFKSFNDDRTQDHDAMVVEGDEA-TERDAG 123

Query: 122 SDSRKLRRVDCVEETNLAPRAESLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKD 181
           SDSRKLR+VDC EE + A R ++ ++D + ARTLKRPRL WTPQLHKRFVDVV+HLG+K+
Sbjct: 124 SDSRKLRKVDCAEEADSALRTDNSMDDPS-ARTLKRPRLVWTPQLHKRFVDVVAHLGIKN 183

Query: 182 AAPKAIMQMMNVEGLTRENVASHLQKYRLYLKRTQIS-----STTDEALVPMPVTQNAHD 232
           A PK IMQ+MNVEGLTRENVASHLQKYRLYLKR Q S     S+ D      PV    H+
Sbjct: 184 AVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPPTLHE 243

[Close]

BLAST of CsaV3_7G009940 vs. TrEMBL
Match: tr|A0A2I0HU76|A0A2I0HU76_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_044353 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 135/263 (51.33%), Postives = 170/263 (64.64%), Query Frame = 0


Query: 22  RVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIR--DG 81
           RVL WE GLP  + LTPLSQ+LIS ELA AF I  EP R++LDVN AS+ T+ ++R    
Sbjct: 175 RVLEWEAGLPAADDLTPLSQALISPELALAFSISPEPSRTLLDVNRASQTTLASLRGNSA 234

Query: 82  QSEGYRSFEFKYDQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAESLI 141
           QS+G+ +           D + V+ D     D   +DSRK RR++  EE + A RA++  
Sbjct: 235 QSQGFSTNNNFKSFAENRDPMAVDQD-----DVDRTDSRKSRRIESPEEADSALRADNST 294

Query: 142 EDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASHLQ 201
           +D + ARTLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQ+MNVEGLTRENVASHLQ
Sbjct: 295 DDPS-ARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQ 354

Query: 202 KYRLYLKR-----TQISSTTDEALVPMPVTQNAHDSSPGAADSHGNDYFPATFPVTYMPS 261
           KYRLYLKR      +  S++D+     PV Q+ H+S  GA  +HGN + P   P++Y   
Sbjct: 355 KYRLYLKRMHGLSNEGPSSSDQLFASTPVPQSLHESG-GAHSAHGNGHIPVPIPMSYGAP 414

Query: 262 PMMPMMFYGMGAHGHGLSQTAMP 278
            MM M  YGM  HGH   Q   P
Sbjct: 415 QMMSMPMYGMAHHGHMGMQMGNP 430

[Close]

BLAST of CsaV3_7G009940 vs. TrEMBL
Match: tr|A0A1S3C5J0|A0A1S3C5J0_CUCME (transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103497139 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.5e-57
Identity = 127/220 (57.73%), Postives = 157/220 (71.36%), Query Frame = 0


Query: 20  DERVLLWEDGLPDVEKLTPLSQSLISQELASAFRILMEPHRSILDVNSASKMTILNIRDG 79
           +ERV  WE GLPD + LTPLSQ+LI  ELASAF I   P R+++DVN AS+ T+ N+R  
Sbjct: 27  EERVFEWETGLPDADDLTPLSQTLIPPELASAFSISTGPCRTLMDVNRASQNTLSNLRGF 86

Query: 80  QSEGYRSFEFKY---DQTRREDVVMVESDEGINPDDLGSDSRKLRRVDCVEETNLAPRAE 139
           Q++ + S  FK    D+T+  D ++VE DE     D GSDSRKLR+VDC EE + A R +
Sbjct: 87  QAQAFSSNNFKSFNDDRTQDHDPMVVEGDEA-TERDAGSDSRKLRKVDCAEEADSALRTD 146

Query: 140 SLIEDAALARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVAS 199
           + ++D + ARTLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQ+MNVEGLTRENVAS
Sbjct: 147 NSMDDPS-ARTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVAS 206

Query: 200 HLQKYRLYLKRTQIS-----STTDEALVPMPVTQNAHDSS 232
           HLQKYRLYLKR Q S     S+ D      PV Q  H+S+
Sbjct: 207 HLQKYRLYLKRMQGSSNEGPSSPDRIFASTPVPQTLHEST 244

The following BLAST results are available for this feature:

BLAST of CsaV3_7G009940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143206.1	7.6e-167	100.00	PREDICTED: transcription factor PCL1-like [Cucumis sativus] >KGN47131.1 hypothet...	[more]
XP_008464103.1	8.7e-163	97.64	PREDICTED: transcription factor PCL1 [Cucumis melo]	[more]
XP_022947291.1	1.0e-131	81.08	transcription factor PCL1-like [Cucurbita moschata]	[more]
XP_023511812.1	4.8e-129	80.95	transcription factor PCL1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023007011.1	1.5e-127	79.46	transcription factor PCL1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_7G009940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59570.1	5.1e-40	42.28	Homeodomain-like superfamily protein	[more]
AT3G46640.3	1.9e-34	41.37	Homeodomain-like superfamily protein	[more]
AT3G10760.1	2.6e-28	40.76	Homeodomain-like superfamily protein	[more]
AT2G40970.1	1.3e-27	36.82	Homeodomain-like superfamily protein	[more]
AT5G05090.1	9.3e-26	84.13	Homeodomain-like superfamily protein	[more]

BLAST of CsaV3_7G009940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LTH4\|PCLL_ARATH	9.2e-39	42.28	Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1	[more]
sp\|Q9SNB4\|PCL1_ARATH	3.4e-33	41.37	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
sp\|Q94DH3\|PCL1_ORYSJ	1.6e-30	38.82	Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 ...	[more]
sp\|O22210\|MYBC1_ARATH	2.3e-26	36.82	Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1	[more]
sp\|B8AEH1\|ORR23_ORYSI	2.0e-17	45.05	Two-component response regulator ORR23 OS=Oryza sativa subsp. indica OX=39946 GN...	[more]

BLAST of CsaV3_7G009940 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KH89\|A0A0A0KH89_CUCSA	5.0e-167	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190220 PE=4 SV=1	[more]
tr\|A0A1S3CKP6\|A0A1S3CKP6_CUCME	5.7e-163	97.64	transcription factor PCL1 OS=Cucumis melo OX=3656 GN=LOC103502064 PE=4 SV=1	[more]
tr\|A0A0A0LXF6\|A0A0A0LXF6_CUCSA	1.7e-58	55.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524660 PE=4 SV=1	[more]
tr\|A0A2I0HU76\|A0A2I0HU76_PUNGR	1.9e-57	51.33	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_044353 PE=4 SV=1	[more]
tr\|A0A1S3C5J0\|A0A1S3C5J0_CUCME	9.5e-57	57.73	transcription factor PCL1-like OS=Cucumis melo OX=3656 GN=LOC103497139 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR006447	Myb_dom_plants
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G009940.1	CsaV3_7G009940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 152..202 e-value: 3.5E-9 score: 36.6
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 151..203 e-value: 1.9E-22 score: 77.3
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 147..209 e-value: 1.7E-29 score: 103.6
None	No IPR available	PANTHER	PTHR31442	FAMILY NOT NAMED	coord: 18..240
None	No IPR available	PANTHER	PTHR31442:SF12	TRANSCRIPTION FACTOR BOA-RELATED	coord: 18..240
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 147..206 score: 9.29
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 147..207

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G009940	CSPI06G14280	Wild cucumber (PI 183967)	cpicucB377
CsaV3_7G009940	Cucsa.138850	Cucumber (Gy14) v1	cgycucB210
CsaV3_7G009940	CmaCh20G003860	Cucurbita maxima (Rimu)	cmacucB0690
CsaV3_7G009940	CmaCh02G007860	Cucurbita maxima (Rimu)	cmacucB0770
CsaV3_7G009940	CmoCh02G007860	Cucurbita moschata (Rifu)	cmocucB0756
CsaV3_7G009940	CmoCh20G004180	Cucurbita moschata (Rifu)	cmocucB0675
CsaV3_7G009940	Cp4.1LG16g06120	Cucurbita pepo (Zucchini)	cpecucB0370
CsaV3_7G009940	Carg03332	Silver-seed gourd	carcucB0379
CsaV3_7G009940	Carg26584	Silver-seed gourd	carcucB0954
CsaV3_7G009940	Cla013322	Watermelon (97103) v1	cucwmB637
CsaV3_7G009940	MELO3C025894	Melon (DHL92) v3.5.1	cucmeB529
CsaV3_7G009940	ClCG02G019950	Watermelon (Charleston Gray)	cucwcgB574
CsaV3_7G009940	Lsi10G013950	Bottle gourd (USVL1VR-Ls)	cuclsiB525
CsaV3_7G009940	MELO3C025894.2	Melon (DHL92) v3.6.1	cucmedB517
CsaV3_7G009940	Cla97C02G045950	Watermelon (97103) v2	cucwmbB553

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_7G009940	CsaV3_6G016650	Cucumber (Chinese Long) v3	cuccucB217

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G009940	Silver-seed gourd	carcucB0237
CsaV3_7G009940	Cucumber (Gy14) v2	cgybcucB098
CsaV3_7G009940	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G009940	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G009940	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G009940	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G009940	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G009940	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G009940	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G009940	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G009940	Wild cucumber (PI 183967)	cpicucB122
CsaV3_7G009940	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G009940	Bottle gourd (USVL1VR-Ls)	cuclsiB530
CsaV3_7G009940	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G009940	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G009940	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G009940	Watermelon (97103) v1	cucwmB635
CsaV3_7G009940	Watermelon (97103) v2	cucwmbB550
CsaV3_7G009940	Wax gourd	cucwgoB688