CsaV3_7G007750 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G007750
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 4825079 .. 4826764 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTCAACATGGATTATTTCGTCACAAGAAAACATTCATAATAGTTGATTTTGACACTCGTCTATGTAATTTTGTCGTGCTGAAACTTTTTACATACAAGAGTATTATCTCAATTTATTACGTGTAAGTGACACGCTTTTATAAATAATTACATTCAAACTCTCTAAGATCAATGTAGTTTTCACTAATATTTACGAGACAAATTTATAGTATGAACAAATAAAATATGGTATTTTCATGGTATTAGAAAATATTGATATTTAACTCAGTGGGTAATGTCTATTCATAACAAAGTCAAGCTTGAATAATATTGTTATGAAATATGGCATGTAAAAGGAAGTTGATTAACATGTAACAATTTAATTTCTATCTAATACCCATATGATCTATACCTCTCAAGAAAAATATACATACATATTCATTTTTAAGAGAGAGTTTACATATTTAACATTAATTCAAAGTTATATTAGTAATTTGATTAGAAATTAGAATAAAATAACAACAACAATAACGACATTAATAATAGTTAAATATAAAATATTTCATAAAGTTTAAAATTTGAATTTGAGTTATTATTTAGTGAACATTAAATCATCAATTTTTCAAAAGAAAAAATATTAAAACTTGAAAAGAGGTATGAAAATGTCAGCCTTTTTTCTTTATTATTTATTAGTCTTATAAAATCAAAACAAGAAATATCCGATCGATTTCAAGGAAACATATCAAAGAGAAAACACAGAGGAAAATAATGAGTTATTATAACCAGCCACCGCCTTCCGTCGGCGTTCCTCCTCCGCCGCATGGTAACATCTAAGAATCAACCATATTATTACTCTTTCATCATCATCTCTTACATTTAATCTACACTTTGTTTACGAAATTAGGGTTTTGCCAAACACACATACCTATTTTTACTTTTGTTTGAAAATGTTTTTGTCAAACACAAATACAAATTTTTAAGCAAACATACCTTTCATCTCGATTTGACTGATTTTGACGATTTTAGGTTATCCACTATCGACGATGACGCCGTCAGGGTATCCACTGCAGGGCGGCTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGGTAAGTGATCTCTTGCTTCTCTTTCATTTTACAACTCTTAAAATGTATTCTTAATTTGTTTTTAATAATATATTTAAATTGTTAAATAGATAATTTTATATTTTAAAAATAAGTTAAATGATTTTTATTATTTATTATATCCTATCAATTTCGTTATAATGAAAACTCAGTTCATTATCATTCACGATATCCACCTCTTTCAAACGTCGTCTAATACGATATGTTTGTGAAAATTTATTATTATTTAGCCATTTTTTTTTATCTTTTTAATTTTCTTGTAAATTTTGTAGGTTTTATGAAATACTTTCGTGGACACCTTAATGAACACATGTGAATGGATGACCCGTTGGAGTGATCAAACCACATAAAAATTTGAATTTTTCTAATGTTGTTTAAATTTATATTTCATGATGATCATCTTCATTGTATAACGTTTTATGTTCACCTCCTTGAACTAATGTGTAATTGCATATTAGAATCGGATTATTGCTCGTTGTCAAGTTTTAATACAGTGATAATAAGTTAAACAAA

mRNA sequence

ATGAGTTATTATAACCAGCCACCGCCTTCCGTCGGCGTTCCTCCTCCGCCGCATGGTTATCCACTATCGACGATGACGCCGTCAGGGTATCCACTGCAGGGCGGCTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGGTTTTATGAAATACTTTCGTGGACACCTTAA

Coding sequence (CDS)

ATGAGTTATTATAACCAGCCACCGCCTTCCGTCGGCGTTCCTCCTCCGCCGCATGGTTATCCACTATCGACGATGACGCCGTCAGGGTATCCACTGCAGGGCGGCTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGGTTTTATGAAATACTTTCGTGGACACCTTAA

Protein sequence

MSYYNQPPPSVGVPPPPHGYPLSTMTPSGYPLQGGYPPQGYPPPSTHGHPPPQHVHQDQKKDGCFKRWFYEILSWTP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G007750.1CsaV3_7G007750.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G007750CSPI07G06780Wild cucumber (PI 183967)cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G007750Cucumber (Chinese Long) v3cuccucB100
CsaV3_7G007750Cucumber (Chinese Long) v3cuccucB188
CsaV3_7G007750Silver-seed gourdcarcucB0329
CsaV3_7G007750Silver-seed gourdcarcucB0490
CsaV3_7G007750Silver-seed gourdcarcucB0770
CsaV3_7G007750Cucumber (Gy14) v2cgybcucB198
CsaV3_7G007750Cucumber (Gy14) v2cgybcucB348
CsaV3_7G007750Cucumber (Gy14) v1cgycucB342
CsaV3_7G007750Cucumber (Gy14) v1cgycucB540
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0057
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0232
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0414
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0589
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0639
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0918
CsaV3_7G007750Cucurbita maxima (Rimu)cmacucB0959
CsaV3_7G007750Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G007750Cucurbita moschata (Rifu)cmocucB0409
CsaV3_7G007750Cucurbita moschata (Rifu)cmocucB0623
CsaV3_7G007750Cucurbita moschata (Rifu)cmocucB0910
CsaV3_7G007750Cucurbita moschata (Rifu)cmocucB0949
CsaV3_7G007750Cucurbita pepo (Zucchini)cpecucB0141
CsaV3_7G007750Cucurbita pepo (Zucchini)cpecucB0323
CsaV3_7G007750Cucurbita pepo (Zucchini)cpecucB0582
CsaV3_7G007750Cucurbita pepo (Zucchini)cpecucB0736
CsaV3_7G007750Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G007750Cucurbita pepo (Zucchini)cpecucB0995
CsaV3_7G007750Wild cucumber (PI 183967)cpicucB123
CsaV3_7G007750Wild cucumber (PI 183967)cpicucB248
CsaV3_7G007750Bottle gourd (USVL1VR-Ls)cuclsiB554
CsaV3_7G007750Bottle gourd (USVL1VR-Ls)cuclsiB555
CsaV3_7G007750Bottle gourd (USVL1VR-Ls)cuclsiB573
CsaV3_7G007750Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G007750Melon (DHL92) v3.5.1cucmeB581
CsaV3_7G007750Melon (DHL92) v3.5.1cucmeB569
CsaV3_7G007750Melon (DHL92) v3.5.1cucmeB585
CsaV3_7G007750Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G007750Melon (DHL92) v3.6.1cucmedB555
CsaV3_7G007750Melon (DHL92) v3.6.1cucmedB572
CsaV3_7G007750Watermelon (Charleston Gray)cucwcgB556
CsaV3_7G007750Watermelon (Charleston Gray)cucwcgB572
CsaV3_7G007750Watermelon (Charleston Gray)cucwcgB601
CsaV3_7G007750Watermelon (97103) v1cucwmB602
CsaV3_7G007750Watermelon (97103) v1cucwmB607
CsaV3_7G007750Watermelon (97103) v1cucwmB635
CsaV3_7G007750Watermelon (97103) v2cucwmbB537
CsaV3_7G007750Watermelon (97103) v2cucwmbB550
CsaV3_7G007750Watermelon (97103) v2cucwmbB577
CsaV3_7G007750Wax gourdcucwgoB674
CsaV3_7G007750Wax gourdcucwgoB686
CsaV3_7G007750Wax gourdcucwgoB702