CSPI07G06780 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTATTATAACCAGCCACCGCCCGTTCCTCCGCCGCATGGTAACATCTAAGAATCAACCATATTATTACTCTTTCATCATCATCTCTTACATTTAATCTACACTTTGTTTACGAAATTAGGGTTTTGCCAAACACACATACCTATATTTACTTTTGTTTGAAAATGTTTTTGTCAAACACAAATACAAATTTTTAAGCAAACATACCTTTCATCTCGATTTGACTGATTTTGACGATTTTAGGTTATCCATTATCGTCGCAAGGATATGGTCCTCCGATGATGATGACGTCGTCAGGGTATCCACTGCAGGGCGGTTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGG ATGAGTTATTATAACCAGCCACCGCCCGTTCCTCCGCCGCATGGTTATCCATTATCGTCGCAAGGATATGGTCCTCCGATGATGATGACGTCGTCAGGGTATCCACTGCAGGGCGGTTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGG ATGAGTTATTATAACCAGCCACCGCCCGTTCCTCCGCCGCATGGTTATCCATTATCGTCGCAAGGATATGGTCCTCCGATGATGATGACGTCGTCAGGGTATCCACTGCAGGGCGGTTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGG
BLAST of CSPI07G06780 vs. TrEMBL
Match: A0A0A0K2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.0e-08 Identity = 44/78 (56.41%), Postives = 47/78 (60.26%), Query Frame = 1
BLAST of CSPI07G06780 vs. TrEMBL
Match: A0A078FK17_BRANA (BnaC04g47670D protein OS=Brassica napus GN=BnaC04g47670D PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.4e-06 Identity = 39/72 (54.17%), Postives = 41/72 (56.94%), Query Frame = 1
BLAST of CSPI07G06780 vs. TrEMBL
Match: A0A0D3C5M4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.4e-06 Identity = 39/72 (54.17%), Postives = 41/72 (56.94%), Query Frame = 1
BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|778724815|ref|XP_011658867.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 5.8e-08 Identity = 44/78 (56.41%), Postives = 47/78 (60.26%), Query Frame = 1
BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|659110097|ref|XP_008455047.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo]) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-07 Identity = 40/79 (50.63%), Postives = 45/79 (56.96%), Query Frame = 1
BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|848872427|ref|XP_012836776.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Erythranthe guttata]) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-06 Identity = 43/77 (55.84%), Postives = 46/77 (59.74%), Query Frame = 1
BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|828329882|ref|XP_012574344.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cicer arietinum]) HSP 1 Score: 58.2 bits (139), Expect = 7.1e-06 Identity = 38/70 (54.29%), Postives = 41/70 (58.57%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |