CSPI07G06780 (gene) Wild cucumber (PI 183967)

NameCSPI07G06780
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 4931470 .. 4931888 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTATTATAACCAGCCACCGCCCGTTCCTCCGCCGCATGGTAACATCTAAGAATCAACCATATTATTACTCTTTCATCATCATCTCTTACATTTAATCTACACTTTGTTTACGAAATTAGGGTTTTGCCAAACACACATACCTATATTTACTTTTGTTTGAAAATGTTTTTGTCAAACACAAATACAAATTTTTAAGCAAACATACCTTTCATCTCGATTTGACTGATTTTGACGATTTTAGGTTATCCATTATCGTCGCAAGGATATGGTCCTCCGATGATGATGACGTCGTCAGGGTATCCACTGCAGGGCGGTTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGG

mRNA sequence

ATGAGTTATTATAACCAGCCACCGCCCGTTCCTCCGCCGCATGGTTATCCATTATCGTCGCAAGGATATGGTCCTCCGATGATGATGACGTCGTCAGGGTATCCACTGCAGGGCGGTTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGG

Coding sequence (CDS)

ATGAGTTATTATAACCAGCCACCGCCCGTTCCTCCGCCGCATGGTTATCCATTATCGTCGCAAGGATATGGTCCTCCGATGATGATGACGTCGTCAGGGTATCCACTGCAGGGCGGTTATCCTCCACAAGGATATCCACCTCCATCGACGCACGGTCATCCTCCACCGCAACATGTACATCAAGACCAAAAGAAAGATGGATGCTTCAAACGCTGG
BLAST of CSPI07G06780 vs. TrEMBL
Match: A0A0A0K2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.0e-08
Identity = 44/78 (56.41%), Postives = 47/78 (60.26%), Query Frame = 1

Query: 2  SYYNQPPP---VPPPHGYPLSSQGYGPPMMMTSSGYPLQG-----GYPPQGYPPPSTHG- 61
          SYY QPPP   VPPP GYP   QGY P       GYP QG     GYPPQGYPPP  +G 
Sbjct: 3  SYYAQPPPPVGVPPPQGYP--PQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGP 62

Query: 62 ----HPPPQHVHQDQKKD 67
              HPPPQ  HQ+QKK+
Sbjct: 63 AYGHHPPPQ--HQNQKKE 76

BLAST of CSPI07G06780 vs. TrEMBL
Match: A0A078FK17_BRANA (BnaC04g47670D protein OS=Brassica napus GN=BnaC04g47670D PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-06
Identity = 39/72 (54.17%), Postives = 41/72 (56.94%), Query Frame = 1

Query: 1  MSYYNQPPP-VPPPHGYPLSSQGYG----PPMMMTSSGYPLQGGYPPQGYPPPSTHGHPP 60
          MS YNQPP  VPPP GYP   +GY     PP      GYP QG YP QGYPPP    +PP
Sbjct: 1  MSQYNQPPVGVPPPQGYP--PEGYPKDAYPPQGYPPQGYPPQG-YPQQGYPPPYAPQYPP 60

Query: 61 PQHVHQDQKKDG 68
          PQH  Q Q   G
Sbjct: 61 PQHQQQQQGSPG 69

BLAST of CSPI07G06780 vs. TrEMBL
Match: A0A0D3C5M4_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 8.4e-06
Identity = 39/72 (54.17%), Postives = 41/72 (56.94%), Query Frame = 1

Query: 1  MSYYNQPPP-VPPPHGYPLSSQGYG----PPMMMTSSGYPLQGGYPPQGYPPPSTHGHPP 60
          MS YNQPP  VPPP GYP   +GY     PP      GYP QG YP QGYPPP    +PP
Sbjct: 1  MSQYNQPPVGVPPPQGYP--PEGYPKDAYPPQGYPPQGYPPQG-YPQQGYPPPYAPQYPP 60

Query: 61 PQHVHQDQKKDG 68
          PQH  Q Q   G
Sbjct: 61 PQHQQQQQGSPG 69

BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|778724815|ref|XP_011658867.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-08
Identity = 44/78 (56.41%), Postives = 47/78 (60.26%), Query Frame = 1

Query: 2  SYYNQPPP---VPPPHGYPLSSQGYGPPMMMTSSGYPLQG-----GYPPQGYPPPSTHG- 61
          SYY QPPP   VPPP GYP   QGY P       GYP QG     GYPPQGYPPP  +G 
Sbjct: 3  SYYAQPPPPVGVPPPQGYP--PQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGP 62

Query: 62 ----HPPPQHVHQDQKKD 67
              HPPPQ  HQ+QKK+
Sbjct: 63 AYGHHPPPQ--HQNQKKE 76

BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|659110097|ref|XP_008455047.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-07
Identity = 40/79 (50.63%), Postives = 45/79 (56.96%), Query Frame = 1

Query: 2  SYYNQPPP---VPPPHGYPLSSQGYGPPMMMTSSGYPLQGGYPPQGYPP----------P 61
          SYY QPPP   VPPP GYP   QGY P       GYP QGGYPP GYPP          P
Sbjct: 3  SYYAQPPPPVGVPPPQGYP--PQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 62

Query: 62 STHGHPPPQHVHQDQKKDG 68
          +  GHPPPQ+ +  +K+ G
Sbjct: 63 AYGGHPPPQYQNNQKKEVG 79

BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|848872427|ref|XP_012836776.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Erythranthe guttata])

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-06
Identity = 43/77 (55.84%), Postives = 46/77 (59.74%), Query Frame = 1

Query: 1  MSYY--NQPPP-VPPPHGYPLSSQGYGPPMMMTSSGYPLQG----GYPPQGYPPPS---T 60
          MSYY  NQPP  VPPP GYP   QGY PP      GYP QG    GYPPQGYPPP     
Sbjct: 1  MSYYKDNQPPVGVPPPQGYP--PQGY-PPQGYPPQGYPPQGYPPQGYPPQGYPPPQYAPQ 60

Query: 61 HGHPPPQHVHQDQKKDG 68
          +G PPPQ  H+  K+ G
Sbjct: 61 YGAPPPQQKHKKDKEGG 74

BLAST of CSPI07G06780 vs. NCBI nr
Match: gi|828329882|ref|XP_012574344.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cicer arietinum])

HSP 1 Score: 58.2 bits (139), Expect = 7.1e-06
Identity = 38/70 (54.29%), Postives = 41/70 (58.57%), Query Frame = 1

Query: 1   MSYYNQPPP---VPPPHGYP---LSSQGYGPPMMMTSSGYPLQGGYPPQGYPPPS---TH 60
           MSYYNQ  P   VPPP GYP      +GY PP      GYP Q GYPPQGYPPP     H
Sbjct: 50  MSYYNQQQPPVGVPPPQGYPPEGYGKEGYPPP------GYPPQQGYPPQGYPPPGYPPQH 109

Query: 61  GHPPPQHVHQ 62
           G+PPP +  Q
Sbjct: 110 GYPPPPYPAQ 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K2W8_CUCSA4.0e-0856.41Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070830 PE=4 SV=1[more]
A0A078FK17_BRANA8.4e-0654.17BnaC04g47670D protein OS=Brassica napus GN=BnaC04g47670D PE=4 SV=1[more]
A0A0D3C5M4_BRAOL8.4e-0654.17Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778724815|ref|XP_011658867.1|5.8e-0856.41PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc... [more]
gi|659110097|ref|XP_008455047.1|1.7e-0750.63PREDICTED: CYSTM1 family protein A-like [Cucumis melo][more]
gi|848872427|ref|XP_012836776.1|1.9e-0655.84PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Ery... [more]
gi|828329882|ref|XP_012574344.1|7.1e-0654.29PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cic... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06780.1CSPI07G06780.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G06780CsaV3_7G007750Cucumber (Chinese Long) v3cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06780Wild cucumber (PI 183967)cpicpiB091
CSPI07G06780Wild cucumber (PI 183967)cpicpiB169
CSPI07G06780Wild cucumber (PI 183967)cpicpiB170
CSPI07G06780Cucumber (Gy14) v1cgycpiB336
CSPI07G06780Cucumber (Gy14) v1cgycpiB582
CSPI07G06780Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06780Cucurbita maxima (Rimu)cmacpiB351
CSPI07G06780Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06780Cucurbita maxima (Rimu)cmacpiB786
CSPI07G06780Cucurbita moschata (Rifu)cmocpiB136
CSPI07G06780Cucurbita moschata (Rifu)cmocpiB344
CSPI07G06780Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06780Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06780Cucumber (Chinese Long) v2cpicuB333
CSPI07G06780Cucumber (Chinese Long) v2cpicuB347
CSPI07G06780Cucumber (Chinese Long) v2cpicuB354
CSPI07G06780Melon (DHL92) v3.5.1cpimeB538
CSPI07G06780Melon (DHL92) v3.5.1cpimeB557
CSPI07G06780Melon (DHL92) v3.5.1cpimeB569
CSPI07G06780Melon (DHL92) v3.5.1cpimeB573
CSPI07G06780Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06780Watermelon (Charleston Gray)cpiwcgB576
CSPI07G06780Watermelon (Charleston Gray)cpiwcgB599
CSPI07G06780Watermelon (97103) v1cpiwmB594
CSPI07G06780Watermelon (97103) v1cpiwmB596
CSPI07G06780Watermelon (97103) v1cpiwmB623
CSPI07G06780Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06780Cucurbita pepo (Zucchini)cpecpiB470
CSPI07G06780Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06780Cucurbita pepo (Zucchini)cpecpiB804
CSPI07G06780Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06780Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06780Bottle gourd (USVL1VR-Ls)cpilsiB550
CSPI07G06780Melon (DHL92) v3.6.1cpimedB558
CSPI07G06780Melon (DHL92) v3.6.1cpimedB523
CSPI07G06780Melon (DHL92) v3.6.1cpimedB542
CSPI07G06780Cucumber (Gy14) v2cgybcpiB088
CSPI07G06780Cucumber (Gy14) v2cgybcpiB199
CSPI07G06780Cucumber (Gy14) v2cgybcpiB332
CSPI07G06780Silver-seed gourdcarcpiB0214
CSPI07G06780Silver-seed gourdcarcpiB0329
CSPI07G06780Silver-seed gourdcarcpiB0493
CSPI07G06780Silver-seed gourdcarcpiB0767
CSPI07G06780Cucumber (Chinese Long) v3cpicucB386
CSPI07G06780Cucumber (Chinese Long) v3cpicucB404
CSPI07G06780Cucumber (Chinese Long) v3cpicucB405
CSPI07G06780Watermelon (97103) v2cpiwmbB542
CSPI07G06780Watermelon (97103) v2cpiwmbB554
CSPI07G06780Watermelon (97103) v2cpiwmbB580
CSPI07G06780Wax gourdcpiwgoB659
CSPI07G06780Wax gourdcpiwgoB672
CSPI07G06780Wax gourdcpiwgoB689