CsaV3_7G006540 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G006540
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	tobamovirus multiplication protein 1-like
Location	chr7 : 4051870 .. 4058876 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATAATATCATACGTGTCATTCACTTTTGCACAAGTGAAGTTAATAACCGTCCACGTGTCTAAGATTTGCTCTCTCGTAGACCAAACTACGCTCTCTTGTAGCCGCGCCCCCCGCATTAATGGCGAAGAAGCCTTCTTCTTCTTTCCCTTTCCCGCGGCACTAACGAAGCATAAGAACCCTTCTCTTTCTCCCATTCTCTTCTTTCTCCATTTCCAGGCTCTAATGGCGAGGGCTTTATCCACAATCACCTCTACGCTTGGAGGATTCCAACTCTGGAATGAAATTGATGATTCTGACCATTGGCAGAAAGGGATTTACTACGCCTTGTCCGCTTCTTATGCCCTCATATCCCTCATTGCATTAGTACTCCACTTTTCTCTCTTCCTTACTGTCTTTTTGTTCTCTATCTTCTGAATTTCATTACTTATGTGAAGCTTTTTTTTTTAATGTGTGTGTTTTCATCTCTTTATTGGAATTTAACATGGCTTCTTTCCTAATGGAAACAACCCGATAATCATGATGTCTCCTTCATATTTATGATTATAGTAAAATAGACTTCTGGGTGTGCTGTGTGCTTATACTATATGTGTGAGGTGATTACAACGGTTAGAGGTACTGATTTTCTGTGATAATTTTAAGACAGTTCTTTGGGTTTCACACTCGGTCGAGTTGGGATTCAATTCTTTGGGTAATTAGGGTGATCAATTAATGTCTTAAATTAATCTGTACTCTTAAGAATGAAGTTTCGTTGAATTGTATTGAGTGTTTTTATGGAAACTCGATATAGCTATAACACGTTGGCTAGGAAACAAGACCGACACTCAATGTGCCAGTCACTGGCACAGCCCTTGGACACCTTGCAAAGATTGCACTAGGTGTAATTTGTATGTGTGAATTGTTGTCGTAGGTGCGGACACATGGAAGAAAAATTGTTGCTTTAGGACAGAAGAGGTGTTTTGTCCCACCTTCCATTTTGTTATTAGGGTTTTCTTCTTTGTTGCTCGGCTTTTTCTGCCACCTTGCTCATGGGAGATTGGGTTAGATAGAAAGGGGAATTTTCAATAGTTTTGACTGTGAGAGGTCTTGGGAAGATGTTCAGTCTTGTATTAGATTTAATACTTCCCTTTGGGCATTGGCATCGAAGGAATTTCATAAAAAAATCTTGGGAAAAATACATTTTTGGTTTGATTTGGTTTCCCTATGCTCTCCTAGGTTTCAAAAGTTAACACATTTAGTCCTTAAGTTTTGGGTTGAGTTTCAATCTAGTCCCTAAATTTATAAATGTTACAATCTCTCTTGATGTCAATATCTATTAATTAATTTAAGATGATTGAGAATTAAGATGTAAATTTAATTTCAGTAGAGATAAAATATATTTAAACTTATTTAATTATAATTATTTTAAATTAATTAAACACATTAAACTAAAGACGGAAAATGAATACGTAGTGGAAAATCATCAGTTAAAAGTGTGAATCTTGAAATCTAGGGACCAAATTGAGAGCAAACTCAAATATGAAAGGTTAAAATTTGTAACCATTACTAATTTGAAACTAAACTCAAAACTTAAAAGAACTAAATGTGTGAAATATTGAAACCTAGAGACAAAATAACCATTACTAATTTGAAACTAAACTCAAAACTTAAAAGAACTAAATGTGTGAAATATTGAAACCTAGAGACAAAATAGAAACTAGATCGGACCAAAAAGGTTCATTTCCCAAAATTCTTTAGACATGGTTCTCTTGGATTGGAGCTTTTTTTTTTTTTTCCTTTTTTTAGATAGCTAGTTCAGTTTTTGGTAGCTCCTTTTGTAAAGGTATGTCCTTTTGTATTCTTTTGTTGGTTTCTCACTAAAAGAAGAAAGAAAGATAGAAGTTGCATACTTTAGATTAAGTAGCTGTCGTGGGAAAGAGAACGCAGCATTTTGTTTTTATAATAACGCCTAATACAGTGAGTAATTGCTCAAGTTTCCAGGTTCAACTTATTCGGATTCAAATAAGAGTACCAGAATTCGAGTGGACTACACAAAAGGGGTTCCATTTGATGAATTTTATTGTAAATGGATGTAAGATTGTACATTTGTTATTTTTCCTTAAATTTTAAGGTTCTTTTTTATGAGTTAATTCTAACCTTATTTTCATTTTGACAGTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTCTTCCTCATCAAACCAAAGGTAGGTCTCTTCTGTTAATTGTCGCCAGTGCCTATCATGTGATCATCAAGTGTATCTAGGTTTCATTTTGATGTTTTCTTGAGATTATTTAAGAGTTGAAAGGATGATAATCTAAACTAAAACTTTTGGTTGATTTTATTATAAGCACCTTCCTTTTGTTATAGGTTACTTGTTACTTCAGAACATTTCTAGAATAAATTGATTTATTCTTCATTCAGCAAAGCTTTCATCCAACATGCTAAGCTTACTTGAACAGACGAAAAGGGAGAAAACAAAGAAAAGCTAATAACAGGACAACGACCTCCACAAATCTCCCAATTAATTTGATATTGTCCACTTTGGCATAATGCTTCATGGTTTTGCTTGTGGTTTCTCCCAAAAAAGCCACATATCAATGAAGATAGTTGTTCTCACTAATATACTCTTGATTGTTCTCTTATCTAGCCAACGTGGGACATTGGTCACATACCCAACAATTCTTATCTGGTAGAGAGGACCAATAAGCCTTTGCTTAAATGGTCATCCATGGTTAGCTCTTCTTCACTAGAGCACACCACCTATTTGATAGAGTCAACCGCAGATCCCCCGTAACTACATCTTTGTTTCGCACTTAAGGATTCTATCGAATTGGCTAAGTTAGAGGCATTGATCTGATACCATTTGATGAGGACATTTACCCCCGAATTATCTCCACAATAGTATGATATTATCCAATTTTGGGATAAACCCTCATGGTTTTGCTTGTGGTTTCACTTTAAAATGCTTCATACTAATGAAGATTGGTAGTCTCACTTATTTGCCTCTATCCATCCTCTTCCCTAGTCAGTGCAGAACTTTGGTTGTATTTCCAACAAATTATTCCTTCGCATTTGTATTTGAAATTATGGTAATATCTTATTCAATTTTCTTTATTTCCCATGGAATGTCAAGAAACATAAATAAACATTAAAAAAAAAAAAAATCCGGTTGCTGTTGGACTGTTTGTCATAAACATTCATGGGTTTCTCCCCTTATCTGACAATGGGAACCATAGCATTATTAGATAAAGATCTGTTGCGTTATGCTTTTTTGTTACCCATTACAATCCAGTGAGCGGGCCATCTTATTCCCATATCAAAAAAGCAAGTCAATATGTGAACTTAAAATTGATAATCTAGATATTTAAAGAGACCCACGTTCATTTTTCCATCTGTAACTGTACGGGTTGAAACTTTACTGCTGGTAAAGGTTCTTGAAATGGTGATTATGGAGATTCCTGGACTTCTATTCTTTTCAACGTACACACTGCTTGTTCTATTTTGGGCAGAGATATACCACCAGGTAATTTGTGATTATTATTATTATTTAATCTAATCCGAGTTACATACATATAATATCAATTCTATGCAAGACTCGTTCTCCATTTGTATTGGTGATTATTTTTCTTTCAGGCACGGAGTCTTCCTATTAGCAAACTTAAGCCTACTTACTGTATCGTCAATGGAGTTATGTACATTATACAGGTAAAATAAAAAATGTCAGCCAAAGGTTGTCAGTGCTATATGAAACATAAAATGCTTAATTTGATTGATTTGTTTACGTTCAGCTCTGTTTCAATTATTTTATTTGTCATTGTGTTTTCAGATCTGCATTTGGATTATTGTGATGTTAGAGCATTCTCCTGGTGCAGTTATAGTTGCTAAGCTTTTCTTTTCAGGTTGCAGCTCAAAACTTGCATTTTTTTCTCTTATATGAAAGATAAGAAATGGGGTGTTTAATTGATGTCCATTTCAACTTATATCTTTTGTCTTCCACGTTCTACTTTATGGAGACATGTATTGAATTTTTTCTTTACTATTTCCAGTGGTTTCATTCTCTGCTGCACTGGGTTTTCTGATATATGGTGGGAGGTAATAGATGTTCATGAATTCAGGAGCTGTGGTTAATTATGTTCCAGCCTGACAATTACTTTCTTAACAGGCTATTTGTCATGCTGAGGCAGTTCCCAATTGAATCCAGAGGACGCCAAAAGAAGTTGTATGAGGTGGGTTCGTTAGTGTGTTTTTTTATCGATAGCATTTGAAAAATGTAAATGTACCGTAGGACTAGAAACATTTAATGTAATTGAATTTAGGAAAGCCAAAAGTTCACAAATTACCCTGCTTGATAATGCCATTGAAATTGAATATTAGAAGTGGATCGTGATGACGTCTTTGTATTTCATAGTTCACGTAGTATTCAATTAAAGAAGTCTACCTTGATTATTTCAAACTCTATGCTGCTGATCGATTATTGAGATTGGGCATGTAAACATCAAGGATATAACTGACAAATGGTGTATATTTCAAGGATCAATAACGAATTTAGGCTTTCAAAAATTAAGTTTTGATGAGGCTGGTGGGGGTATCTAACTTTTCTTAAGCACCATGAGTTGGCTTAGCAAACCATCTGAGCTGAGCGAATGGGTTCAATTCATAATGCTCACCTACCTAGAATTTAACATCTCATGATTCTTATGAGTTACCTTAACAACCAAATATAATGGGGTTCACGAGAATGAAGCTGCTTAAACATGAGGATATGAATAAAATTATATTTTTGCTTATCTTTGCAGGTTGGTTGCGTGACAACAATTTGTTTTAGCTGTTTCTTTATACGATGTTTTGTGGTGAGTTTTCATTTGGTTACACTAATCTGGATCCAACATTCTTTTAGTGAATAATACATGTATTTGTTCATCTTGTAGCTTGCTCTATCTGCATTTGATAAGGATGCAGACCTTGATGTCCTAGATCATCCCATTCTCAACCTGATATACTACATGGCTAGTTTCTAAATCCCTACTTTATATTCTAATTTCCTCTCTTGATGCATGAATTACTTCTTTTTAGTTAGAAGTTGTGAGTAAATCAACTGTGGAGGTTTAAGCATGGTTTTACTTGTTGGAATTGATAGGATTGTTAGCTAACTTTTCTTTTTCCACTCCTTAAAAATGATATATATTCACGATTATTTAGCTTACATTATTTACACAGGAAGGAAAGTTCTGAACTTTCCAGCACTAGTTACAACATAGCATGAAACTTGAAAAAAGGGTCCTCAACTCTGTTTAATTCAAAATCTATCAAGATTTTTATTTCATTAGTGGATCGGTAGCAAGGAAGATGTCTTCGTTAGTTGGTTCAGTTTGTTGTATTCTCTGTCAGAAGGCTGATGAGAGTTGTTTGGGTTGATTTCTTTGAAACATTTTCTCTCTCACTCGTCACAGGAACATGAGTGATGTGATCATGGAGTTTCTCCTCACTTTTTTATTTCATGAAAAGTGATTTTCTCTGAGGTTGCAGGAGTATGTGCAATTATGCAGGATCTTTGGGGTAAATAGATTAGTATATCATCTCCCAAATAAAAAGTTGTGTCCAGTGACTTCTGATTTTTCCTTCCTTAGATTCCCTTCAGTTTTCGTCACCCGCCCTTTGAGGTGGTGTGTCTTTCTTCCCTTCTGTACCAAGGGAGGAGTAATGCTAAGATTTTCTCCAGACAGAAAGAAAAGATTGTACCTCAAGTAGGTGACATAGTGCTAGGGTGAAGCCTAGACATTGGATGGGTCTGTTGTGATGGTACGACAATGCACTGATCTTTTCCTTGTCTTCTGACTTCTTGTGCTTCCATTTGGGCTTGAAAAACTATCTTCTAGTGGGCCTCAGGCCAAGTCAAACGTGATGATTAATGTCCACAAGACCCAAAGTTGATGACAAATTGCATATACACAACAACAAGAGTGCAACTTTGTGGTGTTATATGTTCTCTTTGATTTTCTTCTCTTGAAAGAAGTTGGTGTCTGTGGTCTTATAACTGCCCGTTGTAGTTGAACAAACATTTTCTGTTCTTTGTCTAATTTATTTACTTTATAGTTGTGTAATCTTCTGACAAAATTGATGTGCATGTTACTGCAGTTGGTAGAGGTTGTTCCGTCGGCACTGGTTCTGTTTATACTGAGAAAACTTCCTCCGAGGCGTATATCTGATCGGTACCATCCCATTGAGTGAAGCTCTCAACAATAGATGACATTTTATCTTTAGGACTTTGATTAGAGGGCTGTTTTTCTCTATATCTACAATATACTAGTATAATCCCTTCTAATTGAATCTAAAAGTAGTTCTATCAGCCAAAAACAAAACATGGCCCAGAGAATACGTCTTTTGCAAACATGCTCCTGCACAGTTGGTATAGTTTCTTCCATCAACATTGGATTTTTGTACTGTGAAAACTTCCTTCGAGACGTGTGCCTGATCGGGTATCACCCCACATAATGAAGCTCTAAACAAATTCTGGTCAGCAGAACTTACCATCCTAACTATGTATTTACAGATACACTCTACTGAATGAAGCTTCTCGACAATTTCTGGTCAGCAGAACTTTCCACTTTCATTGTGTATTTAATTTTTGTAGTTGTTTGTTTTTTAGGTACTTGCATTACAGATTCTTTTCCTTTTATTTTCCTTTTTCTTTTGTCTGTTTGGCTGGATTTACTACACACATGATGCTTCTAATTTAATCCAAACGTAGTTCTTTGACCTGAAAACACCTTCTTTGCTTATGTGATAAAACAAAAGATCCCATTAGTCAAGTTGCTTTATGATTGCTTTAATTGCAGTAACCGGAATACCATTCTTTAACGTTGTTGGAGTAGTCTAATTATGTTACGTTAGAGAGGAGATTTGTAAATCAAGATGCATATAAATCCACAATTATTGGCACAAGTATAGGTACTTCAACGAACCAACCTTGTGAAATATTCTGTTTTTGTTCATGTTTTTTCTT

mRNA sequence

ATGGCGAGGGCTTTATCCACAATCACCTCTACGCTTGGAGGATTCCAACTCTGGAATGAAATTGATGATTCTGACCATTGGCAGAAAGGGATTTACTACGCCTTGTCCGCTTCTTATGCCCTCATATCCCTCATTGCATTAGTTCAACTTATTCGGATTCAAATAAGAGTACCAGAATTCGAGTGGACTACACAAAAGGGGTTCCATTTGATGAATTTTATTGTAAATGGATTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTCTTCCTCATCAAACCAAAGGTTCTTGAAATGGTGATTATGGAGATTCCTGGACTTCTATTCTTTTCAACGTACACACTGCTTGTTCTATTTTGGGCAGAGATATACCACCAGGCACGGAGTCTTCCTATTAGCAAACTTAAGCCTACTTACTGTATCGTCAATGGAGTTATGTACATTATACAGATCTGCATTTGGATTATTGTGATGTTAGAGCATTCTCCTGGTGCAGTTATAGTTGCTAAGCTTTTCTTTTCAGTGGTTTCATTCTCTGCTGCACTGGGTTTTCTGATATATGGTGGGAGGCTATTTGTCATGCTGAGGCAGTTCCCAATTGAATCCAGAGGACGCCAAAAGAAGTTGTATGAGGTTGGTTGCGTGACAACAATTTGTTTTAGCTGTTTCTTTATACGATGTTTTGTGCTTGCTCTATCTGCATTTGATAAGGATGCAGACCTTGATGTCCTAGATCATCCCATTCTCAACCTGATATACTACATGTTGGTAGAGGTTGTTCCGTCGGCACTGGTTCTGTTTATACTGAGAAAACTTCCTCCGAGGCGTATATCTGATCGGTACCATCCCATTGAGTGA

Coding sequence (CDS)

ATGGCGAGGGCTTTATCCACAATCACCTCTACGCTTGGAGGATTCCAACTCTGGAATGAAATTGATGATTCTGACCATTGGCAGAAAGGGATTTACTACGCCTTGTCCGCTTCTTATGCCCTCATATCCCTCATTGCATTAGTTCAACTTATTCGGATTCAAATAAGAGTACCAGAATTCGAGTGGACTACACAAAAGGGGTTCCATTTGATGAATTTTATTGTAAATGGATTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTCTTCCTCATCAAACCAAAGGTTCTTGAAATGGTGATTATGGAGATTCCTGGACTTCTATTCTTTTCAACGTACACACTGCTTGTTCTATTTTGGGCAGAGATATACCACCAGGCACGGAGTCTTCCTATTAGCAAACTTAAGCCTACTTACTGTATCGTCAATGGAGTTATGTACATTATACAGATCTGCATTTGGATTATTGTGATGTTAGAGCATTCTCCTGGTGCAGTTATAGTTGCTAAGCTTTTCTTTTCAGTGGTTTCATTCTCTGCTGCACTGGGTTTTCTGATATATGGTGGGAGGCTATTTGTCATGCTGAGGCAGTTCCCAATTGAATCCAGAGGACGCCAAAAGAAGTTGTATGAGGTTGGTTGCGTGACAACAATTTGTTTTAGCTGTTTCTTTATACGATGTTTTGTGCTTGCTCTATCTGCATTTGATAAGGATGCAGACCTTGATGTCCTAGATCATCCCATTCTCAACCTGATATACTACATGTTGGTAGAGGTTGTTCCGTCGGCACTGGTTCTGTTTATACTGAGAAAACTTCCTCCGAGGCGTATATCTGATCGGTACCATCCCATTGAGTGA

Protein sequence

MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE

Homology

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BLAST of CsaV3_7G006540 vs. NCBI nr
Match: XP_004136876.1 (PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis sativus] >KGN43722.1 hypothetical protein Csa_7G062880 [Cucumis sativus])

HSP 1 Score: 558.5 bits (1438), Expect = 1.3e-155
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF 60
           MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF
Sbjct: 1   MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF 60

Query: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120
           EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW
Sbjct: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120

Query: 121 AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180
           AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA
Sbjct: 121 AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180

Query: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240
           ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD
Sbjct: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240

Query: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE
Sbjct: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 285

[Close]

BLAST of CsaV3_7G006540 vs. NCBI nr
Match: XP_008455199.1 (PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 540.4 bits (1391), Expect = 3.6e-150
Identity = 275/285 (96.49%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF 60
           MARALSTITST GGFQ WNEIDDS+HWQKGIYY L+ASYA+ISLIALVQLIRIQIRVPEF
Sbjct: 1   MARALSTITSTAGGFQWWNEIDDSEHWQKGIYYTLAASYAIISLIALVQLIRIQIRVPEF 60

Query: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120
           EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW
Sbjct: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120

Query: 121 AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180
           AEIYHQARSLPI KLKP YCI+NGVMYIIQI IWIIVMLEHSPGAVIVAKLFFSVVSFSA
Sbjct: 121 AEIYHQARSLPIHKLKPAYCIINGVMYIIQIGIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180

Query: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240
           ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD
Sbjct: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240

Query: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE
Sbjct: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 285

[Close]

BLAST of CsaV3_7G006540 vs. NCBI nr
Match: XP_022988878.1 (tobamovirus multiplication protein 1-like [Cucurbita maxima] >XP_022988879.1 tobamovirus multiplication protein 1-like [Cucurbita maxima])

HSP 1 Score: 503.8 bits (1296), Expect = 3.8e-139
Identity = 249/278 (89.57%), Postives = 266/278 (95.68%), Query Frame = 0


Query: 8   ITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKG 67
           ITS +GGF+ WN+ID+S+ WQKGIYYALSASY LIS+IALVQLIRIQ+RVPEFEWTTQKG
Sbjct: 7   ITSAVGGFEWWNQIDESEDWQKGIYYALSASYGLISIIALVQLIRIQVRVPEFEWTTQKG 66

Query: 68  FHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQA 127
           FHLMNF+VNGLRAILFGLYKSVFLI+PK LEMV+ME+PGLLFFSTYTLLVLFWAEIY+QA
Sbjct: 67  FHLMNFVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQA 126

Query: 128 RSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIY 187
           RSLPI KLKPTYCI+NGV+Y+IQICIWI VML  SPGAVI AKLFFSVVS SAALGFLIY
Sbjct: 127 RSLPIDKLKPTYCIINGVIYVIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIY 186

Query: 188 GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHP 247
           GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICF+CFFIRCFVLA SAFDKD+DLDVLDHP
Sbjct: 187 GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFTCFFIRCFVLAFSAFDKDSDLDVLDHP 246

Query: 248 ILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           ILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE
Sbjct: 247 ILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 284

[Close]

BLAST of CsaV3_7G006540 vs. NCBI nr
Match: XP_023530045.1 (tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 1.1e-138
Identity = 249/278 (89.57%), Postives = 265/278 (95.32%), Query Frame = 0


Query: 8   ITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKG 67
           ITS +GGF+ WN+ID+S+ WQKGIYYALSASY LIS+IALVQLIRIQ+RVPEFEWTTQKG
Sbjct: 7   ITSAVGGFEWWNQIDESEDWQKGIYYALSASYGLISIIALVQLIRIQVRVPEFEWTTQKG 66

Query: 68  FHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQA 127
           FHLMNF+VNGLRAILFGLYKSVFLI+PK LEMV+ME+PGLLFFSTYTLLVLFWAEIY+QA
Sbjct: 67  FHLMNFVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQA 126

Query: 128 RSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIY 187
           RSLPI KLKPTYCI+NGV+Y+IQICIWI VML  SPGAVI AKLFFSVVS SAALGFLIY
Sbjct: 127 RSLPIDKLKPTYCIINGVIYLIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIY 186

Query: 188 GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHP 247
           GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICF CFFIRCFVLA SAFDKDADLDVLDHP
Sbjct: 187 GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFICFFIRCFVLAFSAFDKDADLDVLDHP 246

Query: 248 ILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           ILNLIYYMLVEVVPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 247 ILNLIYYMLVEVVPSALVLFILRKLPPRRMSDRYHPIE 284

[Close]

BLAST of CsaV3_7G006540 vs. NCBI nr
Match: XP_022927927.1 (tobamovirus multiplication protein 1-like isoform X1 [Cucurbita moschata] >XP_022927928.1 tobamovirus multiplication protein 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 501.1 bits (1289), Expect = 2.4e-138
Identity = 247/278 (88.85%), Postives = 265/278 (95.32%), Query Frame = 0


Query: 8   ITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKG 67
           ITS +GGF+ WN+ID+S+ WQKGIYY LSASY LIS+IALVQLIRIQ+RVPEFEWTTQKG
Sbjct: 7   ITSAVGGFEWWNQIDESEDWQKGIYYTLSASYGLISIIALVQLIRIQVRVPEFEWTTQKG 66

Query: 68  FHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQA 127
           FHLMNF+VNGLRAILFGLYKSVFLI+PK LEMV+ME+PGLLFFSTYTLLVLFWAEIY+QA
Sbjct: 67  FHLMNFVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQA 126

Query: 128 RSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIY 187
           RSLPI +LKPTYCI+NGV+Y+IQICIWI VML  SPGAVI AKLFFSVVS SAALGFLIY
Sbjct: 127 RSLPIDRLKPTYCIINGVIYVIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIY 186

Query: 188 GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHP 247
           GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICF+CFFIRCFVLA SAFDKDADLDVLDHP
Sbjct: 187 GGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFTCFFIRCFVLAFSAFDKDADLDVLDHP 246

Query: 248 ILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           ILNLIYYMLVEVVPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 247 ILNLIYYMLVEVVPSALVLFILRKLPPRRMSDRYHPIE 284

[Close]

BLAST of CsaV3_7G006540 vs. TAIR10
Match: AT4G21790.1 (tobamovirus multiplication 1)

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-102
Identity = 178/268 (66.42%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W+++++S  WQ GI++AL  +YAL+S +ALVQLIRIQ+RVPE+ WTTQK FHLMNF+VNG
Sbjct: 24  WDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFVVNG 83

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           +RA+LFG +  VFL+ PK L  V++++PGLLFFS YTLLVLFWAEIYHQARSLP  KL+ 
Sbjct: 84  VRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDKLRI 143

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           TY  VN  +Y+ QI IW  + +  +    +V K+F +VVSF AALGFL+YGGRLF MLR+
Sbjct: 144 TYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLRR 203

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FPIES+GR+KKL+EVG VT ICF+CF IRC V+A+SAFDKD  LDVLDHP+LNLIYYM+V
Sbjct: 204 FPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMVV 263

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPIE 286
           EV+PSALVLFILRKLPP+R+S +YHPI+
Sbjct: 264 EVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of CsaV3_7G006540 vs. TAIR10
Match: AT2G02180.1 (tobamovirus multiplication protein 3)

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-87
Identity = 146/267 (54.68%), Postives = 217/267 (81.27%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W+++++S  WQ  I++ L+  Y ++SL+A++QL+RIQ+RVPE+ WTTQK FH +NF+VNG
Sbjct: 36  WSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNFVVNG 95

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           +RA++F   ++V  ++P++L+ ++++IP L FF+TY LLVLFWAEIY+QAR++    L+P
Sbjct: 96  VRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRP 155

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           ++  +N V+Y++QI +W+++  +     VI++K+FF+ VS  AALGFL+YGGRLF+ML++
Sbjct: 156 SFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQR 215

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FP+ES+GR+KKL EVG VTTICF+CF IRC ++  +AFD+ A+LDVLDHPILN IYY+LV
Sbjct: 216 FPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLLV 275

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPI 285
           E++PS+LVLFILRKLPP+R   +YH I
Sbjct: 276 EILPSSLVLFILRKLPPKRGITQYHQI 302

[Close]

BLAST of CsaV3_7G006540 vs. TAIR10
Match: AT1G14530.1 (Protein of unknown function (DUF1084))

HSP 1 Score: 315.8 bits (808), Expect = 2.6e-86
Identity = 148/272 (54.41%), Postives = 214/272 (78.68%), Query Frame = 0


Query: 14  GFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNF 73
           G   W ++++S  WQ  I++ L+  Y ++S+IA++QL+RIQ+RVPE+ WTTQK FH +NF
Sbjct: 22  GKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNF 81

Query: 74  IVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIS 133
           +VNG+RA++F   +    ++P++L+ ++++IP L FF+TY LLVLFWAEIY+QAR++   
Sbjct: 82  MVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 134 KLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFV 193
            L+P++  +N V+Y+IQI +W+++  +     VI++K+FF+ VS  AALGFL+YGGRLF+
Sbjct: 142 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 194 MLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIY 253
           ML++FP+ES+GR+KKL EVG VTTICF+CF IRC ++   AFD  ADLDVLDHPILN IY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 261

Query: 254 YMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           Y+LVE++PS+LVLFILRKLPP+R   +YH I+
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of CsaV3_7G006540 vs. TAIR10
Match: AT3G59090.2 (Protein of unknown function DUF1084 (InterPro:IPR009457))

HSP 1 Score: 51.6 bits (122), Expect = 9.3e-07
Identity = 64/294 (21.77%), Postives = 116/294 (39.46%), Query Frame = 0


Query: 40  ALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIK----PK 99
           A ++ IA +QL R   R  +  WT QK  HLM    N    I F         +      
Sbjct: 32  AALAFIAFLQLSRFHRRNKQVGWTRQKVLHLMIASSNTGSVIYFVAAVIATCTRWHHWSN 91

Query: 100 VLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQA---------------------------- 159
            L  ++M  P +LF +T+ LL+ FW ++ HQ                             
Sbjct: 92  ALGFLLMAFPKILFLATFLLLLSFWVDVCHQGNXXXXXXXXXXXXXXXXXXXXXXXXXXX 151

Query: 160 ------------RSLPISKLKPTYCIVNGVMYIIQICIWIIVML---EHSPGAVIVAKLF 219
                         + +   +        +++I+ I   I++ +   ++   + ++A+++
Sbjct: 152 XXXXXXXXXXSFHGIHVGTRQKFVVAAIILVFILMISFAILIWIASGKNPMNSSLLAEVY 211

Query: 220 ---FSVVSFSAALGFLIYGGRLFVMLRQFPIES-RGRQKKLYEVGCVTTICFSCFFIRCF 279
              F+ +      G   YG RL   LR+   E      +K+  +  V+ +CF+   +   
Sbjct: 212 VDIFAAIILITGGGICFYGLRLLFNLRKVRSEQVSSEMRKVSGLAGVSVVCFTVSSLIAL 271

Query: 280 VLALSAFD--KDADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDR 281
           +  +  F     + L  +   +L +IYY +   VP A VL++LR+LPP+ I  R
Sbjct: 272 LTHIPLFYHWNPSKLHGIKALVLLIIYYFIGSTVPLAFVLWVLRELPPQNIVSR 325

[Close]

BLAST of CsaV3_7G006540 vs. Swiss-Prot
Match: sp|Q402F4|TOM1_TOBAC (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.3e-103
Identity = 178/267 (66.67%), Postives = 225/267 (84.27%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W++I++S  WQ GI+Y+L ASYAL+S +AL+QLIRI++RVPE+ WTTQK FHLMNF+VNG
Sbjct: 21  WDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELRVPEYGWTTQKVFHLMNFVVNG 80

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           +RAI+FG +K VFL  PKVL + I+++PGLLFFST+TLLVLFWAEIYHQARSLP  KL+ 
Sbjct: 81  VRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLLVLFWAEIYHQARSLPTDKLRI 140

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           +Y  +NG +Y IQ CIW+ +    +     + K+F +VVSF AALGFL+YGGRLF+MLR+
Sbjct: 141 SYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIAVVSFIAALGFLLYGGRLFLMLRR 200

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FPIES+GR+KKL+EVG VT ICF+CF I CFV+ LSAFD DA LDVLDHP+LNLIYY+LV
Sbjct: 201 FPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSAFDPDASLDVLDHPVLNLIYYLLV 260

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPI 285
           E++PSALVL+ILRKLPP+R+S +YHPI
Sbjct: 261 EILPSALVLYILRKLPPKRVSAQYHPI 287

[Close]

BLAST of CsaV3_7G006540 vs. Swiss-Prot
Match: sp|Q9FEG2|TOM1_ARATH (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 4.7e-101
Identity = 178/268 (66.42%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W+++++S  WQ GI++AL  +YAL+S +ALVQLIRIQ+RVPE+ WTTQK FHLMNF+VNG
Sbjct: 24  WDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFVVNG 83

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           +RA+LFG +  VFL+ PK L  V++++PGLLFFS YTLLVLFWAEIYHQARSLP  KL+ 
Sbjct: 84  VRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDKLRI 143

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           TY  VN  +Y+ QI IW  + +  +    +V K+F +VVSF AALGFL+YGGRLF MLR+
Sbjct: 144 TYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLRR 203

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FPIES+GR+KKL+EVG VT ICF+CF IRC V+A+SAFDKD  LDVLDHP+LNLIYYM+V
Sbjct: 204 FPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMVV 263

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPIE 286
           EV+PSALVLFILRKLPP+R+S +YHPI+
Sbjct: 264 EVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of CsaV3_7G006540 vs. Swiss-Prot
Match: sp|Q402F3|TOM3_TOBAC (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.3e-87
Identity = 152/267 (56.93%), Postives = 215/267 (80.52%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W E++ S  WQ  +++ L+  Y ++S +ALVQLIRIQ+RVPE+ WTTQK FH +NF+VNG
Sbjct: 27  WEEVNRSRAWQDRLFHVLAILYGIVSAVALVQLIRIQMRVPEYGWTTQKVFHFLNFLVNG 86

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           +R+++F   + V  + P++++ +++++P L FF+TY LLVLFWAEIY+QAR++    L+P
Sbjct: 87  VRSLVFAFRRDVQKLHPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRP 146

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           ++  +NGV+Y+IQI +W+I+  +     VI++K+FF+ VS  AALGFL+YGGRLF+ML++
Sbjct: 147 SFFTINGVVYVIQIILWLIIWWKPVRVLVILSKMFFAGVSLFAALGFLLYGGRLFLMLQR 206

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FP+ES+GR+KKL EVG VTTICFSCF IRC ++  +AF+K ADLDVLDHPILNLIYY+LV
Sbjct: 207 FPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKAADLDVLDHPILNLIYYLLV 266

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPI 285
           E++PS+LVLFILRKLPP+R   +YHPI
Sbjct: 267 EILPSSLVLFILRKLPPKRGITQYHPI 293

[Close]

BLAST of CsaV3_7G006540 vs. Swiss-Prot
Match: sp|Q9ZUM2|TOM3_ARATH (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=1 SV=2)

HSP 1 Score: 320.5 bits (820), Expect = 1.9e-86
Identity = 146/267 (54.68%), Postives = 217/267 (81.27%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W+++++S  WQ  I++ L+  Y ++SL+A++QL+RIQ+RVPE+ WTTQK FH +NF+VNG
Sbjct: 36  WSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNFVVNG 95

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           +RA++F   ++V  ++P++L+ ++++IP L FF+TY LLVLFWAEIY+QAR++    L+P
Sbjct: 96  VRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRP 155

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           ++  +N V+Y++QI +W+++  +     VI++K+FF+ VS  AALGFL+YGGRLF+ML++
Sbjct: 156 SFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQR 215

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FP+ES+GR+KKL EVG VTTICF+CF IRC ++  +AFD+ A+LDVLDHPILN IYY+LV
Sbjct: 216 FPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLLV 275

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPI 285
           E++PS+LVLFILRKLPP+R   +YH I
Sbjct: 276 EILPSSLVLFILRKLPPKRGITQYHQI 302

[Close]

BLAST of CsaV3_7G006540 vs. Swiss-Prot
Match: sp|Q948R8|THH1_ARATH (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.8e-85
Identity = 148/272 (54.41%), Postives = 214/272 (78.68%), Query Frame = 0


Query: 14  GFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNF 73
           G   W ++++S  WQ  I++ L+  Y ++S+IA++QL+RIQ+RVPE+ WTTQK FH +NF
Sbjct: 22  GKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNF 81

Query: 74  IVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIS 133
           +VNG+RA++F   +    ++P++L+ ++++IP L FF+TY LLVLFWAEIY+QAR++   
Sbjct: 82  MVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 134 KLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFV 193
            L+P++  +N V+Y+IQI +W+++  +     VI++K+FF+ VS  AALGFL+YGGRLF+
Sbjct: 142 GLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 194 MLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIY 253
           ML++FP+ES+GR+KKL EVG VTTICF+CF IRC ++   AFD  ADLDVLDHPILN IY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIY 261

Query: 254 YMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           Y+LVE++PS+LVLFILRKLPP+R   +YH I+
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of CsaV3_7G006540 vs. TrEMBL
Match: tr|A0A0A0K5Z8|A0A0A0K5Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062880 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 8.5e-156
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF 60
           MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF
Sbjct: 1   MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF 60

Query: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120
           EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW
Sbjct: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120

Query: 121 AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180
           AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA
Sbjct: 121 AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180

Query: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240
           ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD
Sbjct: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240

Query: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE
Sbjct: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 285

[Close]

BLAST of CsaV3_7G006540 vs. TrEMBL
Match: tr|A0A1S3C0C4|A0A1S3C0C4_CUCME (tobamovirus multiplication protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495421 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 2.4e-150
Identity = 275/285 (96.49%), Postives = 279/285 (97.89%), Query Frame = 0


Query: 1   MARALSTITSTLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEF 60
           MARALSTITST GGFQ WNEIDDS+HWQKGIYY L+ASYA+ISLIALVQLIRIQIRVPEF
Sbjct: 1   MARALSTITSTAGGFQWWNEIDDSEHWQKGIYYTLAASYAIISLIALVQLIRIQIRVPEF 60

Query: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120
           EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW
Sbjct: 61  EWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFW 120

Query: 121 AEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180
           AEIYHQARSLPI KLKP YCI+NGVMYIIQI IWIIVMLEHSPGAVIVAKLFFSVVSFSA
Sbjct: 121 AEIYHQARSLPIHKLKPAYCIINGVMYIIQIGIWIIVMLEHSPGAVIVAKLFFSVVSFSA 180

Query: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240
           ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD
Sbjct: 181 ALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDAD 240

Query: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE
Sbjct: 241 LDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 285

[Close]

BLAST of CsaV3_7G006540 vs. TrEMBL
Match: tr|A0A1S3C132|A0A1S3C132_CUCME (tobamovirus multiplication protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495421 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 3.5e-125
Identity = 234/238 (98.32%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 48  VQLIRIQIRVPEFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGL 107
           VQLIRIQIRVPEFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGL
Sbjct: 29  VQLIRIQIRVPEFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGL 88

Query: 108 LFFSTYTLLVLFWAEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVI 167
           LFFSTYTLLVLFWAEIYHQARSLPI KLKP YCI+NGVMYIIQI IWIIVMLEHSPGAVI
Sbjct: 89  LFFSTYTLLVLFWAEIYHQARSLPIHKLKPAYCIINGVMYIIQIGIWIIVMLEHSPGAVI 148

Query: 168 VAKLFFSVVSFSAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRC 227
           VAKLFFSVVSFSAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRC
Sbjct: 149 VAKLFFSVVSFSAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRC 208

Query: 228 FVLALSAFDKDADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 286
           FVLALSAFDKDADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE
Sbjct: 209 FVLALSAFDKDADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 266

[Close]

BLAST of CsaV3_7G006540 vs. TrEMBL
Match: tr|A0A2P2KE08|A0A2P2KE08_RHIMU (Virion binding protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 3.9e-116
Identity = 208/267 (77.90%), Postives = 242/267 (90.64%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W+EI++S+ WQ+GI+Y LSASYAL+S +ALVQL RIQ+RVPE+ WTTQK FHLMNF+VNG
Sbjct: 26  WDEINESEEWQRGIFYFLSASYALVSFVALVQLCRIQLRVPEYGWTTQKVFHLMNFLVNG 85

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           LRA+LFGLYKSVFLI+PK LEM+++++P LLFFSTYTLLVLFWAEIYHQARSLPI KL+P
Sbjct: 86  LRAVLFGLYKSVFLIRPKALEMLLLDLPSLLFFSTYTLLVLFWAEIYHQARSLPIDKLRP 145

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           TY IVNG +Y+IQ CIWI + L  SP A  V KLFFS+VSF AALGFLIYGGRLFVMLR+
Sbjct: 146 TYYIVNGSIYLIQGCIWIFMRLSSSPVAEEVGKLFFSIVSFGAALGFLIYGGRLFVMLRR 205

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FPIESRGRQKKLYEVGCVT IC +CF IRCFV+ALSAF+K AD+DVLDHPILNLIYY+LV
Sbjct: 206 FPIESRGRQKKLYEVGCVTAICCTCFLIRCFVVALSAFNKKADIDVLDHPILNLIYYLLV 265

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPI 285
           E++PSA+VLFILRKLPP+RISD+YHPI
Sbjct: 266 EILPSAMVLFILRKLPPKRISDQYHPI 292

[Close]

BLAST of CsaV3_7G006540 vs. TrEMBL
Match: tr|B9SIP7|B9SIP7_RICCO (Virion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0824990 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.3e-115
Identity = 206/267 (77.15%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 18  WNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVPEFEWTTQKGFHLMNFIVNG 77
           W+EID+++ WQ+GI+Y L ASYAL+S++ALVQL RIQ+RVPE+ WTTQK FHLMNF+VNG
Sbjct: 31  WDEIDETEEWQEGIFYFLCASYALVSIVALVQLFRIQLRVPEYGWTTQKVFHLMNFVVNG 90

Query: 78  LRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKP 137
           LRAILFG+YK VFLIKPK LE+V++++P LLFFSTYTLLVLFWAEIYHQARSLPI KL+P
Sbjct: 91  LRAILFGIYKDVFLIKPKALEIVLLDLPSLLFFSTYTLLVLFWAEIYHQARSLPIDKLRP 150

Query: 138 TYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQ 197
           TY IVN  +Y IQ CIWI + L  SP    +AKLFFSV+SF AALGFLIYGGRLFVMLR+
Sbjct: 151 TYYIVNVFVYFIQGCIWIYIRLSRSPVGEELAKLFFSVISFCAALGFLIYGGRLFVMLRR 210

Query: 198 FPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMLV 257
           FPIESRGRQKKLYEVGCVT ICF+CF IRCFV+A+SAFDK AD+DVL+HP+LNLIYY LV
Sbjct: 211 FPIESRGRQKKLYEVGCVTGICFTCFLIRCFVVAISAFDKKADIDVLNHPLLNLIYYTLV 270

Query: 258 EVVPSALVLFILRKLPPRRISDRYHPI 285
           E+VPSALVLFILRKLPP+RISD+YHPI
Sbjct: 271 EIVPSALVLFILRKLPPKRISDQYHPI 297

The following BLAST results are available for this feature:

BLAST of CsaV3_7G006540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136876.1	1.3e-155	100.00	PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis sativus...	[more]
XP_008455199.1	3.6e-150	96.49	PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo]	[more]
XP_022988878.1	3.8e-139	89.57	tobamovirus multiplication protein 1-like [Cucurbita maxima] >XP_022988879.1 tob...	[more]
XP_023530045.1	1.1e-138	89.57	tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022927927.1	2.4e-138	88.85	tobamovirus multiplication protein 1-like isoform X1 [Cucurbita moschata] >XP_02...	[more]

BLAST of CsaV3_7G006540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21790.1	2.6e-102	66.42	tobamovirus multiplication 1	[more]
AT2G02180.1	1.1e-87	54.68	tobamovirus multiplication protein 3	[more]
AT1G14530.1	2.6e-86	54.41	Protein of unknown function (DUF1084)	[more]
AT3G59090.2	9.3e-07	21.77	Protein of unknown function DUF1084 (InterPro:IPR009457)	[more]

BLAST of CsaV3_7G006540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q402F4\|TOM1_TOBAC	2.3e-103	66.67	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 S...	[more]
sp\|Q9FEG2\|TOM1_ARATH	4.7e-101	66.42	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=...	[more]
sp\|Q402F3\|TOM3_TOBAC	2.3e-87	56.93	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 S...	[more]
sp\|Q9ZUM2\|TOM3_ARATH	1.9e-86	54.68	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=...	[more]
sp\|Q948R8\|THH1_ARATH	4.8e-85	54.41	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1	[more]

BLAST of CsaV3_7G006540 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5Z8\|A0A0A0K5Z8_CUCSA	8.5e-156	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062880 PE=4 SV=1	[more]
tr\|A0A1S3C0C4\|A0A1S3C0C4_CUCME	2.4e-150	96.49	tobamovirus multiplication protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1S3C132\|A0A1S3C132_CUCME	3.5e-125	98.32	tobamovirus multiplication protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A2P2KE08\|A0A2P2KE08_RHIMU	3.9e-116	77.90	Virion binding protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|B9SIP7\|B9SIP7_RICCO	7.3e-115	77.15	Virion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0824990 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009457	DUF1084

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G006540.1	CsaV3_7G006540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	Domain of unknown function DUF1084	PFAM	PF06454	DUF1084	coord: 17..284 e-value: 6.1E-131 score: 435.7
None	No IPR available	PANTHER	PTHR31142:SF5	SUBFAMILY NOT NAMED	coord: 9..284
None	No IPR available	PANTHER	PTHR31142	FAMILY NOT NAMED	coord: 9..284

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G006540	CSPI07G05570	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G006540	Cucsa.217960	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G006540	CmaCh19G002520	Cucurbita maxima (Rimu)	cmacucB0642
CsaV3_7G006540	CmaCh11G016510	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G006540	CmoCh11G014830	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G006540	CmoCh19G002730	Cucurbita moschata (Rifu)	cmocucB0627
CsaV3_7G006540	Cp4.1LG15g02230	Cucurbita pepo (Zucchini)	cpecucB0326
CsaV3_7G006540	Cp4.1LG04g07070	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G006540	CsGy7G005210	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G006540	Carg24511	Silver-seed gourd	carcucB1013
CsaV3_7G006540	Cla012853	Watermelon (97103) v1	cucwmB580
CsaV3_7G006540	MELO3C018638	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G006540	ClCG09G015470	Watermelon (Charleston Gray)	cucwcgB535
CsaV3_7G006540	Lsi03G007580	Bottle gourd (USVL1VR-Ls)	cuclsiB555
CsaV3_7G006540	MELO3C018638.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G006540	Cla97C09G177460	Watermelon (97103) v2	cucwmbB581
CsaV3_7G006540	Bhi05G000705	Wax gourd	cucwgoB686

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G006540	Silver-seed gourd	carcucB0402