CsaV3_7G006510 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006510
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 4046708 .. 4046969 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCAAATTCACAAATCTGAGGTTTGCTGCTATGGGTATTCATATCGGGGATGACAAACGCATTGTTCTCGCAAGTCAATTAACTTTGGTCCATTAGGGTCATTACCAAGAGACAGAAGATAACATACTGCAAAGTTGCTGGACGTCGCCGAAGTGGAAGACAGGCCGACGGCTGGAGAAGGTTAACGAAAGAGAGTGCGAGGGCGTCCGCGTTCACGAGGAAGAAAAAACCGCTATGGGTCGGGCTTGCTCGTCCTGA

mRNA sequence

ATGGTTCAAATTCACAAATCTGAGGGTCATTACCAAGAGACAGAAGATAACATACTGCAAAGTTGCTGGACGTCGCCGAAGTGGAAGACAGGCCGACGGCTGGAGAAGGTTAACGAAAGAGAGTGCGAGGGCGTCCGCGTTCACGAGGAAGAAAAAACCGCTATGGGTCGGGCTTGCTCGTCCTGA

Coding sequence (CDS)

ATGGTTCAAATTCACAAATCTGAGGGTCATTACCAAGAGACAGAAGATAACATACTGCAAAGTTGCTGGACGTCGCCGAAGTGGAAGACAGGCCGACGGCTGGAGAAGGTTAACGAAAGAGAGTGCGAGGGCGTCCGCGTTCACGAGGAAGAAAAAACCGCTATGGGTCGGGCTTGCTCGTCCTGA

Protein sequence

MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACSS
Homology
[Close]
BLAST of CsaV3_7G006510 vs. NCBI nr
Match: KGN43719.1 (hypothetical protein Csa_7G062850 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACS 60
          MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACS
Sbjct: 1  MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]
BLAST of CsaV3_7G006510 vs. TrEMBL
Match: tr|A0A0A0K404|A0A0A0K404_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062850 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACS 60
          MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACS
Sbjct: 1  MVQIHKSEGHYQETEDNILQSCWTSPKWKTGRRLEKVNERECEGVRVHEEEKTAMGRACS 60

Query: 61 S 62
          S
Sbjct: 61 S 61

The following BLAST results are available for this feature:
BLAST of CsaV3_7G006510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43719.14.9e-28100.00hypothetical protein Csa_7G062850 [Cucumis sativus][more]
BLAST of CsaV3_7G006510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006510 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K404|A0A0A0K404_CUCSA3.3e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062850 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G006510.1CsaV3_7G006510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G006510MELO3C018641Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G006510MELO3C018641.2Melon (DHL92) v3.6.1cucmedB536
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G006510Silver-seed gourdcarcucB0402
CsaV3_7G006510Silver-seed gourdcarcucB1013
CsaV3_7G006510Cucumber (Gy14) v2cgybcucB348
CsaV3_7G006510Cucumber (Gy14) v1cgycucB342
CsaV3_7G006510Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G006510Cucurbita maxima (Rimu)cmacucB0642
CsaV3_7G006510Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G006510Cucurbita moschata (Rifu)cmocucB0627
CsaV3_7G006510Cucurbita pepo (Zucchini)cpecucB0326
CsaV3_7G006510Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G006510Wild cucumber (PI 183967)cpicucB415
CsaV3_7G006510Bottle gourd (USVL1VR-Ls)cuclsiB555
CsaV3_7G006510Watermelon (Charleston Gray)cucwcgB535
CsaV3_7G006510Watermelon (97103) v1cucwmB580
CsaV3_7G006510Watermelon (97103) v2cucwmbB581
CsaV3_7G006510Wax gourdcucwgoB686