CsaV3_7G004130 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGCGAAAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGATTGGCTTCTAGGTCACTTTTGGTGACATGTAGAGAGATCTGGTCGGCGATCGTTGATCGACGATCAGATTTGGAGCTACTCGAGCGAGATGGAATTCGAGGTATTTGATATGGGATTGACGCGATGAAGATTGAGTGATGATTGATCAATAACCTTGAAAATTATTTGGAAAAATCGCTATGTAGCTTTGGGATAATTGTACAGAAGAAAAAGGGAAATGAATCGGTTTCTTTGAAATATAATAAATCTCGATTCTGTTTTTCTTTGCTTAATTTGAAGTTTATGTGCAACTAAGTGAGGTTAAATTCAACTGAACTGAATCCAGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCAAACTTTTTGA ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGCGAAAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCAAACTTTTTGA ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGCGAAAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCAAACTTTTTGA MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGSGSVRSCDVDERIAQSEDSLRRVMYLNCWGQGTQICLTDYLLMNQIENLFGSELILGFRSSSYLKDFSPRSAGEDGNQDGNKQTF
BLAST of CsaV3_7G004130 vs. NCBI nr
Match: KGN43581.1 (hypothetical protein Csa_7G046690 [Cucumis sativus]) HSP 1 Score: 183.7 bits (465), Expect = 4.4e-43 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. NCBI nr
Match: KHN04284.1 (hypothetical protein glysoja_037964 [Glycine soja]) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. NCBI nr
Match: XP_020238544.1 (uncharacterized protein LOC109817636 [Cajanus cajan] >XP_020215110.1 uncharacterized protein LOC109799042 [Cajanus cajan] >KYP43466.1 hypothetical protein KK1_035112 [Cajanus cajan] >KYP68979.1 hypothetical protein KK1_022629 [Cajanus cajan]) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. NCBI nr
Match: XP_003540344.1 (uncharacterized protein LOC100817529 [Glycine max] >KRH26897.1 hypothetical protein GLYMA_12G201000 [Glycine max]) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. NCBI nr
Match: XP_017424955.1 (PREDICTED: uncharacterized protein LOC108333943 [Vigna angularis] >BAT92247.1 hypothetical protein VIGAN_07093200 [Vigna angularis var. angularis]) HSP 1 Score: 110.2 bits (274), Expect = 6.2e-21 Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. TAIR10
Match: AT4G28240.1 (Wound-responsive family protein) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11 Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A0A0K6Z3|A0A0A0K6Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.9e-43 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A2N9HZV9|A0A2N9HZV9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 9.8e-23 Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A151RLL3|A0A151RLL3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022629 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A0B2P9R7|A0A0B2P9R7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037964 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0
BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|I1LUD2|I1LUD2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100817529 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |