CsaV3_7G004130 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G004130
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionWound-responsive family protein
Locationchr7 : 3010231 .. 3010997 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGCGAAAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGATTGGCTTCTAGGTCACTTTTGGTGACATGTAGAGAGATCTGGTCGGCGATCGTTGATCGACGATCAGATTTGGAGCTACTCGAGCGAGATGGAATTCGAGGTATTTGATATGGGATTGACGCGATGAAGATTGAGTGATGATTGATCAATAACCTTGAAAATTATTTGGAAAAATCGCTATGTAGCTTTGGGATAATTGTACAGAAGAAAAAGGGAAATGAATCGGTTTCTTTGAAATATAATAAATCTCGATTCTGTTTTTCTTTGCTTAATTTGAAGTTTATGTGCAACTAAGTGAGGTTAAATTCAACTGAACTGAATCCAGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCAAACTTTTTGA

mRNA sequence

ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGCGAAAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCAAACTTTTTGA

Coding sequence (CDS)

ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGCGAAAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGAACCCAGATCTGTTTAACTGACTACCTTTTGATGAATCAAATCGAAAATTTGTTTGGATCTGAACTAATTTTAGGGTTTAGAAGCTCTTCATATTTAAAAGATTTTTCACCGAGATCTGCTGGAGAAGATGGTAACCAAGATGGCAACAAGCAAACTTTTTGA

Protein sequence

MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEGSGSVRSCDVDERIAQSEDSLRRVMYLNCWGQGTQICLTDYLLMNQIENLFGSELILGFRSSSYLKDFSPRSAGEDGNQDGNKQTF
BLAST of CsaV3_7G004130 vs. NCBI nr
Match: KGN43581.1 (hypothetical protein Csa_7G046690 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 4.4e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 93
          SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

BLAST of CsaV3_7G004130 vs. NCBI nr
Match: KHN04284.1 (hypothetical protein glysoja_037964 [Glycine soja])

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT  GHK K+ L S+   R  L SG + +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTHPGHKCKTALTSIHHNRSRLFSGGSLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of CsaV3_7G004130 vs. NCBI nr
Match: XP_020238544.1 (uncharacterized protein LOC109817636 [Cajanus cajan] >XP_020215110.1 uncharacterized protein LOC109799042 [Cajanus cajan] >KYP43466.1 hypothetical protein KK1_035112 [Cajanus cajan] >KYP68979.1 hypothetical protein KK1_022629 [Cajanus cajan])

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGPLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DVD R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVDNRVRQADDSLRKVMYLSCWGQG 93

BLAST of CsaV3_7G004130 vs. NCBI nr
Match: XP_003540344.1 (uncharacterized protein LOC100817529 [Glycine max] >KRH26897.1 hypothetical protein GLYMA_12G201000 [Glycine max])

HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of CsaV3_7G004130 vs. NCBI nr
Match: XP_017424955.1 (PREDICTED: uncharacterized protein LOC108333943 [Vigna angularis] >BAT92247.1 hypothetical protein VIGAN_07093200 [Vigna angularis var. angularis])

HSP 1 Score: 110.2 bits (274), Expect = 6.2e-21
Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ G+K K+ L S+   R  L SG   +DLRPLS +VGS+G
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGYKCKTALNSIHHNRSRLFSGGALSDLRPLSGVVGSDG 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DV +R+ Q+++SLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVQKRVTQADESLRKVMYLSCWGQG 93

BLAST of CsaV3_7G004130 vs. TAIR10
Match: AT4G28240.1 (Wound-responsive family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11
Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++   ++ 
Sbjct: 1  MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSS-----DLRPLAA---ADL 60

Query: 61 SGSVRSCDVDERIAQS--EDSLRRVMYLNCWGQG 93
          +G     +   R + S  ++SLR+VMYLNCW QG
Sbjct: 61 TGDSLPSEERRRTSSSTPDESLRQVMYLNCWAQG 86

BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A0A0K6Z3|A0A0A0K6Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.9e-43
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 93
          SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG
Sbjct: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 92

BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A2N9HZV9|A0A2N9HZV9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.8e-23
Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA VAV QG T+ GHKWKSG+KS++  ++ L SG +++DLRPLS ++GS+ 
Sbjct: 1  MSYLNRVWMAAGVAVVQGKTDQGHKWKSGIKSVQLRKQKLFSGNDTSDLRPLSGMIGSDF 60

Query: 61 SGSVRSCDVDERIAQSEDSLRRVMYLNCWGQG 93
           G + + D DER   +++SLRRVMYLNCWGQG
Sbjct: 61 QGFLGNSDADERPMHADESLRRVMYLNCWGQG 92

BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A151RLL3|A0A151RLL3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022629 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGPLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +G+V  S DVD R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGAVAGSSDVDNRVRQADDSLRKVMYLSCWGQG 93

BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|A0A0B2P9R7|A0A0B2P9R7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037964 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT  GHK K+ L S+   R  L SG + +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTHPGHKCKTALTSIHHNRSRLFSGGSLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

BLAST of CsaV3_7G004130 vs. TrEMBL
Match: tr|I1LUD2|I1LUD2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100817529 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-21
Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG   +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGALSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDVDERIAQSEDSLRRVMYLNCWGQG 93
          +GSV  S DV+ R+ Q++DSLR+VMYL+CWGQG
Sbjct: 61 AGSVAGSSDVENRVRQADDSLRKVMYLSCWGQG 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43581.14.4e-43100.00hypothetical protein Csa_7G046690 [Cucumis sativus][more]
KHN04284.12.1e-2162.37hypothetical protein glysoja_037964 [Glycine soja][more]
XP_020238544.12.1e-2162.37uncharacterized protein LOC109817636 [Cajanus cajan] >XP_020215110.1 uncharacter... [more]
XP_003540344.12.8e-2162.37uncharacterized protein LOC100817529 [Glycine max] >KRH26897.1 hypothetical prot... [more]
XP_017424955.16.2e-2160.22PREDICTED: uncharacterized protein LOC108333943 [Vigna angularis] >BAT92247.1 hy... [more]
Match NameE-valueIdentityDescription
AT4G28240.11.4e-1145.74Wound-responsive family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K6Z3|A0A0A0K6Z3_CUCSA2.9e-43100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1[more]
tr|A0A2N9HZV9|A0A2N9HZV9_FAGSY9.8e-2359.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1[more]
tr|A0A151RLL3|A0A151RLL3_CAJCA1.4e-2162.37Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022629 PE=4 SV=1[more]
tr|A0A0B2P9R7|A0A0B2P9R7_GLYSO1.4e-2162.37Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037964 PE=4 SV=1[more]
tr|I1LUD2|I1LUD2_SOYBN1.8e-2162.37Uncharacterized protein OS=Glycine max OX=3847 GN=100817529 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR022251DUF3774_wound-induced
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G004130.1CsaV3_7G004130.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 9..91
e-value: 3.5E-15
score: 56.7
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090FAMILY NOT NAMEDcoord: 1..92
NoneNo IPR availablePANTHERPTHR33090:SF1SUBFAMILY NOT NAMEDcoord: 1..92

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G004130Cucumber (Chinese Long) v3cuccucB057
CsaV3_7G004130Cucumber (Chinese Long) v3cuccucB213
CsaV3_7G004130Silver-seed gourdcarcucB0176
CsaV3_7G004130Silver-seed gourdcarcucB0675
CsaV3_7G004130Silver-seed gourdcarcucB0915
CsaV3_7G004130Cucumber (Gy14) v1cgycucB029
CsaV3_7G004130Cucumber (Gy14) v1cgycucB177
CsaV3_7G004130Cucumber (Gy14) v1cgycucB226
CsaV3_7G004130Cucurbita maxima (Rimu)cmacucB0511
CsaV3_7G004130Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G004130Cucurbita maxima (Rimu)cmacucB0768
CsaV3_7G004130Cucurbita maxima (Rimu)cmacucB0813
CsaV3_7G004130Cucurbita maxima (Rimu)cmacucB1040
CsaV3_7G004130Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G004130Cucurbita moschata (Rifu)cmocucB0259
CsaV3_7G004130Cucurbita moschata (Rifu)cmocucB0498
CsaV3_7G004130Cucurbita moschata (Rifu)cmocucB0672
CsaV3_7G004130Cucurbita moschata (Rifu)cmocucB0797
CsaV3_7G004130Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G004130Cucurbita pepo (Zucchini)cpecucB0946
CsaV3_7G004130Wild cucumber (PI 183967)cpicucB061
CsaV3_7G004130Wild cucumber (PI 183967)cpicucB373
CsaV3_7G004130Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G004130Melon (DHL92) v3.5.1cucmeB588
CsaV3_7G004130Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G004130Melon (DHL92) v3.6.1cucmedB576
CsaV3_7G004130Watermelon (Charleston Gray)cucwcgB580
CsaV3_7G004130Watermelon (Charleston Gray)cucwcgB561
CsaV3_7G004130Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G004130Watermelon (97103) v1cucwmB609
CsaV3_7G004130Watermelon (97103) v1cucwmB623
CsaV3_7G004130Watermelon (97103) v2cucwmbB534
CsaV3_7G004130Watermelon (97103) v2cucwmbB549
CsaV3_7G004130Watermelon (97103) v2cucwmbB559
CsaV3_7G004130Wax gourdcucwgoB707
CsaV3_7G004130Wax gourdcucwgoB711