CsaV3_7G002860 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G002860
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 2178176 .. 2179625 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACATTTTCTGTCTTTTCCCTTAGCTTCTTCTTCCCCCTTTAATTTCTTAAGCACTTCTTTCATACTCCCTAAGAAGCTATTTCCATGGCCACCGTTGAGGTATCTCAGTAATATTCTTTCACTTTTTACTTTCTTTACAGTTCGAATATGCATCACGTTTTACATCTCTCCATTCATATACGTATTTGTGTAAGAGAAAAAAATTATTCAATCAGATTGTCCAAAGTAACGTATGTATATAAACCACGCTTTGGATATAAAATTAAAAAATTTGCGTACCCCTAATAATAATTAAGTAACAACCTTCTTGAATAATTTTTCTAGGAAAAGAAGGGTGCAATTGCATCTTTTTTTAATTGCCTTATGAGTCTGTTCTCAAGAAATGTATTTAGAATTTTGAAACTTAGAAAATGAACCTTTTGAAAATATAACATGAGTTTTTAGACGAAATACTGATCTAGATATTTTTTTTTTTCAATTAACTTCTTTTCTTCATGCTAATAAAAGATTAAATTTATAGTTATTTAAAAAGTAAAAAAATTAATTGATTGTGATAATTTTAACTGTGATATATATATGATATTAGATAGCAATAACTATAGTATATAGTAAGCCTTTTTTTTTCCTTTTAAGTTTCTAGCTTCGTCTCTCGTAAGAAATTACTATGATAACTTGCAGATCGTATCTCCGAATGCCACTCTCTTAGAAGACACGACGACTGTTAAAGAGACGGTCACAAAAGAAGAAGTCGAGGAACAATCGTCACCAGACACGACATCAAAAGAGAACGTAGAAGAAAAAGAAGAGAGTGTTAAAGTTGACGAAGTTGTTGATGAAAAATCGTCAGATGATTCAGAAGCCGTTGTTCCAAATGAAAAAGTTGAAGCAACGGCTGAAGAGGAAGAGGAGGAAGATGAGGTTGTTATTCTAACAGATGATGACGAGGTCGAGGAATTAGAATATAATGAAGAAGCTGCAGAAGTAGCCAAGGAAGAAAACGACAAACCCGACGAGTCATCGGTCGTACCGGAAGCCAAAGCTGTAGTATCAGAGGAGGCAGAGGAAGAAGATGAGAAGAAAGATGAAGCCGCAGAGGAGAAGAAAGAGTAAGGAAATATGGGATAAAAATTAGGCAATATGATGCATGGGATGGGATAGAGTTGTGTGTTAAAATATTAGTGTGTGGAATATATGTTTGGAAGTTTGGAAGTTTGGAAGCCACCTAAAGAGTCTCTTGACACGTCATTTTCCACGTGGCAAATAAAGTGTTGGTTTGGCTTTTGGTTGTGTAATGGTATAGGGCAAAATTGGGGTTTGTCCCATAATTTTAATTATATATGAGATGTATTTTTATAAGGAGTGGAACTGCTGCCATTATGTTCATCATATCAAGATGTATATTTTAATATTTTCATCTTGGTTGGAACTTGTGTTTATATATGTTGGGGAA

mRNA sequence

ATGGCCACCGTTGAGATCGTATCTCCGAATGCCACTCTCTTAGAAGACACGACGACTGTTAAAGAGACGGTCACAAAAGAAGAAGTCGAGGAACAATCGTCACCAGACACGACATCAAAAGAGAACGTAGAAGAAAAAGAAGAGAGTGTTAAAGTTGACGAAGTTGTTGATGAAAAATCGTCAGATGATTCAGAAGCCGTTGTTCCAAATGAAAAAGTTGAAGCAACGGCTGAAGAGGAAGAGGAGGAAGATGAGGTTGTTATTCTAACAGATGATGACGAGGTCGAGGAATTAGAATATAATGAAGAAGCTGCAGAAGTAGCCAAGGAAGAAAACGACAAACCCGACGAGTCATCGGTCGTACCGGAAGCCAAAGCTGTAGTATCAGAGGAGGCAGAGGAAGAAGATGAGAAGAAAGATGAAGCCGCAGAGGAGAAGAAAGAGTAA

Coding sequence (CDS)

ATGGCCACCGTTGAGATCGTATCTCCGAATGCCACTCTCTTAGAAGACACGACGACTGTTAAAGAGACGGTCACAAAAGAAGAAGTCGAGGAACAATCGTCACCAGACACGACATCAAAAGAGAACGTAGAAGAAAAAGAAGAGAGTGTTAAAGTTGACGAAGTTGTTGATGAAAAATCGTCAGATGATTCAGAAGCCGTTGTTCCAAATGAAAAAGTTGAAGCAACGGCTGAAGAGGAAGAGGAGGAAGATGAGGTTGTTATTCTAACAGATGATGACGAGGTCGAGGAATTAGAATATAATGAAGAAGCTGCAGAAGTAGCCAAGGAAGAAAACGACAAACCCGACGAGTCATCGGTCGTACCGGAAGCCAAAGCTGTAGTATCAGAGGAGGCAGAGGAAGAAGATGAGAAGAAAGATGAAGCCGCAGAGGAGAAGAAAGAGTAA

Protein sequence

MATVEIVSPNATLLEDTTTVKETVTKEEVEEQSSPDTTSKENVEEKEESVKVDEVVDEKSSDDSEAVVPNEKVEATAEEEEEEDEVVILTDDDEVEELEYNEEAAEVAKEENDKPDESSVVPEAKAVVSEEAEEEDEKKDEAAEEKKE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002860.1CsaV3_7G002860.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..120

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G002860CSPI07G02970Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002860Cucsa.180990Cucumber (Gy14) v1cgycucB292
CsaV3_7G002860CsGy7G002660Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002860MELO3C018890Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G002860MELO3C018890.2Melon (DHL92) v3.6.1cucmedB536
The following gene(s) are paralogous to this gene:

None