CsaV3_7G002590 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATCTGAATTCTCTTTTTACGATTCACGATTCATTAAAACAAATGAGATTACTCAGAATTCTCCTCTTTTACCTTTGGTTCTTTTGCTTAGAAAAGTCAACCCATTGACCGGTCAGATGAACAGCGCCGGTCAAATCTTCAGGTTCTGCAGATGAACAAAAGGGAGAATGAAATCAAACAAGCAGGAGAAGACGACCCTTTTTCCTTTTCCTTTTTCTTTTGCATTGTCTTGGGCCGATATGTCGGCTGTGGACTCAAAGCAAGGAGAGCGACGGGTCGTTTTAACTTCAAATCAACGTCATCATATGGGGAAAAAAAAAGAAAGAACCTTTCACAAAATCCCTCGTCGAAGCAAACCCAAAAGCAAAGAACAAGATGAACCCACTTTACTGGCACAAAGTTGCTGCGATTTCTGGTAAAGTGGTTCTCCCTTCGATTCTCTTGTTGTTGCTTCGCGATTATGATTTTCGATTTGTGATTTGATTTTCGCTTTAAACAGGCGTTGCAGCTCTCGGATTGGGCACGTACGGCGCTCATGGTTTCAAACCCAAAAATCCAGCTTATAAAGAGGTTGATTTGCTTCATCTTTGATTCGATTTCTATGATTTGTTCTTCGATTTGATTTTGATTGTTGGTTTGGTTTCAACGTTGTGAAGGTTTGGCAAACGGCGTCTCTTTATCATTTGGTTCACACAGCGGCTCTTCTTGCTGCCCCGTCGACCAAGAACCCTAACATTGTAAGTTTGTAGCACCATCGTTTTTGTATATAAATTTTTTCTGATCATTTTGGGCAAAGTTTATTGATAATCCAAACTTTTAACAAACGATTATTCAGCTAGTCTTACCTGAAAGTAAGCCCCAATTTTAAAGTTTTGGGTATGGTGGAATTCAAAGCACGAGATGATGTTAGGTTTCTTGGAATGTTCAAACCCACAAATAGAACTACTTGTATGTCTAACCCTAACTTTTTTTTTTTTTGGTTTTTTTGTTGGAAAGGATTACTTTCTCACAATTTTTTTATAATCTACAATTGCGAAAACATAAATGAGGTCTTGAAAACGGTTTTGTTTGTCGTTTTGGTTGATTATCAAATAGTTATCAAATGAGACGTTACATCAAATGAAACGTTACATCAAATGAGACGTTACATCAAATGAGACGTTGCATCAAATGAGACGTTACATTGTAGTTTAGGTTGGCAGATATTAATATTGAGGCTTAACTTACAAGTCTAGGTTCTCTTTAGAAGGACAAAGGAAATAAAAAGGTCTTAGCATATGTTAGGTAAAATATTACACAAATAGAAATACAGAAAAATTAGTACAAACACAATTATGCATAGGTCAATGTAAATGGTACTCATTCACATCACATGTTTACAAATATTTTATAAGATAAAGTTACTCATCCAAAATTCTCCTACTATTTACTTTGATTGGTCCTTTGATTCTTTTCCCTCCTTTTTTCTTTTGTGACAGTTTGGAGGCCTTTTGACGGCTGGAATCCTTGCATTTTCTGGCACGTAAGTTACCCGTTTTCTTTTCCATCTTCTATGTCTGTTTGGATCTCTTCTTTTTGCCTCTAAGTTCCTATGATTTATCTTTTACAACATTTCATATTCAAAATTTCCCCTACAACATTTTATTGAAATGATAAAAGTATCCCGCAGAATACTTGATCGACCGAGTGTAATTAGATGAAAAAGAATACATAGTAAGAGATCGATAATGAAGTGTTTAACACAAAAGCATTTGATAAAATAAACCACTTATTGGTTACTTTTTTGCTAAGCACTTAGTGAAGTACTTTTCCATTTCAAATATATCCAAAATTTGTATACTAGATTTGATTTCTGTTACTTTTATTGGGCAAAGATGGCTCTGGATTCAATTTGAGATCTCCACCAGTTTCCTTCCTTTTGGCAATTCTCCACATTGAACTCATCTGTTTGTTATGTTTAAGAGATGAATAAGAATGTGTGGTTGCAACTTGCATTGCAGGTGCTATACTGTGGCTCTTCTTGAAGATAGAAAGTATTCTTCTTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA ATGCAATCTGAATTCTCTTTTTACGATTCACGATTCATTAAAACAAATGAGATTACTCAGAATTCTCCTCTTTTACCTTTGGTTCTTTTGCTTAGAAAAGTCAACCCATTGACCGGTCAGATGAACAGCGCCGGTCAAATCTTCAGGCGTTGCAGCTCTCGGATTGGGCACGTTTGGCAAACGGCGTCTCTTTATCATTTGGTTCACACAGCGGCTCTTCTTGCTGCCCCGTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACGGCTGGAATCCTTGCATTTTCTGGCACGTGCTATACTGTGGCTCTTCTTGAAGATAGAAAGTATTCTTCTTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA ATGCAATCTGAATTCTCTTTTTACGATTCACGATTCATTAAAACAAATGAGATTACTCAGAATTCTCCTCTTTTACCTTTGGTTCTTTTGCTTAGAAAAGTCAACCCATTGACCGGTCAGATGAACAGCGCCGGTCAAATCTTCAGGCGTTGCAGCTCTCGGATTGGGCACGTTTGGCAAACGGCGTCTCTTTATCATTTGGTTCACACAGCGGCTCTTCTTGCTGCCCCGTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACGGCTGGAATCCTTGCATTTTCTGGCACGTGCTATACTGTGGCTCTTCTTGAAGATAGAAAGTATTCTTCTTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA MQSEFSFYDSRFIKTNEITQNSPLLPLVLLLRKVNPLTGQMNSAGQIFRRCSSRIGHVWQTASLYHLVHTAALLAAPSTKNPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF
BLAST of CsaV3_7G002590 vs. NCBI nr
Match: XP_004144544.1 (PREDICTED: transmembrane protein 256 homolog [Cucumis sativus] >KGN43418.1 hypothetical protein Csa_7G032280 [Cucumis sativus]) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. NCBI nr
Match: XP_008462078.1 (PREDICTED: transmembrane protein 256 homolog [Cucumis melo]) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. NCBI nr
Match: XP_022953076.1 (transmembrane protein 256 homolog [Cucurbita moschata]) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. NCBI nr
Match: XP_022969303.1 (transmembrane protein 256 homolog [Cucurbita maxima]) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. NCBI nr
Match: XP_023554646.1 (transmembrane protein 256 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151.4 bits (381), Expect = 2.2e-33 Identity = 74/85 (87.06%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. TAIR10
Match: AT2G04900.1 (unknown protein) HSP 1 Score: 134.8 bits (338), Expect = 3.9e-32 Identity = 65/85 (76.47%), Postives = 74/85 (87.06%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. Swiss-Prot
Match: sp|A4K526|TM256_BUFGR (Transmembrane protein 256 homolog OS=Bufo gargarizans OX=30331 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.8e-10 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. Swiss-Prot
Match: sp|Q568J8|TM256_DANRE (Transmembrane protein 256 OS=Danio rerio OX=7955 GN=tmem256 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 9.1e-07 Identity = 27/72 (37.50%), Postives = 38/72 (52.78%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. TrEMBL
Match: tr|A0A1S3CG60|A0A1S3CG60_CUCME (transmembrane protein 256 homolog OS=Cucumis melo OX=3656 GN=LOC103500518 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. TrEMBL
Match: tr|A0A0A0K1T6|A0A0A0K1T6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032280 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. TrEMBL
Match: tr|V4TKJ4|V4TKJ4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017136mg PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32 Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. TrEMBL
Match: tr|A0A2H5PLC7|A0A2H5PLC7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_147120 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32 Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of CsaV3_7G002590 vs. TrEMBL
Match: tr|A0A067ETK0|A0A067ETK0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032640mg PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.0e-32 Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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