CmoCh19G008770 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G008770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CDO504
Location	Cmo_Chr19 : 8399238 .. 8402123 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAGAAAGCCCTTCACAAAACTCTTCTTGAAGTCACTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGTAATATCACCCCCGATTCTCCTGCTGTAGATTCTTGATTTGGATTTTGATTCGATTTCGGCGTTAAACAGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTGATTTGCTTCATCTTTCGCTGCTTTGAATCGATTTGATTTTGATTGTTTTTTTTTCTCCTGTAAAATCCTGTGAAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTGTAAGTTTCCCCCCTTTTTTCATTCCTCGCGTTTGCAGTACCGTTTCTGGATGTAAATTTTCTCCTTCTGATCATTTTGGGCAAGGCTTATTGATATCAAACGATTATTCAACTCGACCTAACCTGAAAGTAGGAACTAATCTTAAGCTTTAGAGTATGGTGGAAATCAAAGCACTAGATGTTGTGTTTGAATGTTTTGAATCCATTCAGATCTTTTTTCTTTCCCTGGTATAAATTCTTCACATGTTAGGTGGATTCAGCTATAACATTCAAGCCCACAAATAAAACTTGCCATATGTGTATACCCAAACTGTCTCGTTTTATTACCATTTGATATTTTGTTTTTGGAAATTGTGCTTATTTTCTCCAATTTCTTTACGAGGTCTTCATCTTTGCTAATTAAACACTTCAAATCTTAGTCAAATTCCAAATATATAAACAAGATTTTAAACTATTTTGTGGATTTTAAGAACATATGGCAGAATAAAGAACTCATAGGTAGAACTTTTATAAACTCGCTTTCAAAAAACTTAATGGTTACGAAGTAAGACCTGAACTTTTAGTTTTTAGATTTCGCATTGATTTGATGGAAATTAATATTTAAGCTTATCTACAAGTCTAGCTTCTTCCCCAAATGTGTATATATCTATCTATCTATATATATATAGATATATATATAAAAGTATATGTATATATATATTGTCTAATATATCTTATAGGTAAAAGGGTACACACACATAATTTTATCTATGTCAATGTAAATGAATGAGGAACACACGTTAACGAATGTTTTAAAAGATAAAGTTACTCTTCCAAAATTTCCCTAATATTTAAGTTGGTTTTGTGTTTTTCCCCTACTTTGATGGGTCCTTTGATGCTATCTTTATGTTTTTTTTTGGACAGTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAAGACCCATTTTTTGTTTCATCTTTGATGTTTGTTTGGATCTCTCTCTCTTTTGTTTCTATTTGATTTCGCATTCATGTGTCTAAGTTTCCATGATTTACCTGTCACAACATTTCTCAATCTGAAGCTGAATTCATATTCAGTTTTCTTTTGCCCTTTTAACTGATAAGCACAACATTTAATTGATATGATGAATTATACAAAAGAGAGAATAAAAATCCCAAAAAACACTTGATCGACTGATGAGTTAGAAAAGAAAAGCTGTTGAGTTGGCTGAGAAAAATTGTACATGAAGTGAGACTAGTAAGAAGTATGAGACGAGAAAAGATCACCGATAGGAGAAGCTATTGAGAAAAATGTGTACATGAGAAAACGGGCAAAGGGTAATTTATGAAGGAAAAACGTGTACGATGAGAGAACTTAGTGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCTGAAAGAGATCGATTATGAAGTGTTTGAGCCTAATGCATATGATAAACCTCACCCATTAGTGACTCCCTTGCAAAGCACCTCGTTATTAGTTGTGAGATTCCACATCGGCTGGAGAGGAGAATGAAGCATTCCATAAGAGTGTAGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCCGAAAGAGATCGATTATGAAGTGTTTGAGCCTAATGCATCTCATAAACCACACCCATTAGTGACTTCCTTGCAAAGCACCTAGTTATTAGTTGTGAGATCCTACGAAGCATTCCTTATAAGAGTGTGGAAACCTCTCTATAGACGCGTTTTAAAACCTTGGGGGGAATTCCTGGAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGTACTTGGGCCGTTGCATTAGTGCTTTGACTTTTTTTTTTTTTTTTTCCTTCTTTTCGTTTCTTTCTTTATTGAATCTGATCCAAAAGGGCTTAAAAAAGGCATGTAGGACTGATTGAGCATAGAACAGCTTTGGACTCAATTGAAATCTCTTCCAGTTTCCTTTTAGCAGGTTCATATTGAACTCATGTCTGTTTCAGAGATGTATAAGAATGTGTGCTTCCATTGCAGGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAAATTTACCCAGTTTCGATATCTTTTCGATTACTTATGGCTTCACGTATACTTCTGCACATATTCTGTGAAGAATTTCGATGTTTTTCGATAAAAGATATCCGAATCTCGGAAGCTTACTCATCTTCTTCCTCTTCCTCAGATTGTAAAAACGTGAAAGAATCCAAGTGCAGTATAAATGGAATAGTTCATTCATGAATTTAGAGGCAAAAAAATGGTTCAGAATAAAGGGTAGATTCATTAAAATCTAGTTCATTGAGCAGAAAATTAGAGGAATTTTTTTTTATTTAAAAT

mRNA sequence

GACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAGAAAGCCCTTCACAAAACTCTTCTTGAAGTCACTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAAATTTACCCAGTTTCGATATCTTTTCGATTACTTATGGCTTCACGTATACTTCTGCACATATTCTGTGAAGAATTTCGATGTTTTTCGATAAAAGATATCCGAATCTCGGAAGCTTACTCATCTTCTTCCTCTTCCTCAGATTGTAAAAACGTGAAAGAATCCAAGTGCAGTATAAATGGAATAGTTCATTCATGAATTTAGAGGCAAAAAAATGGTTCAGAATAAAGGGTAGATTCATTAAAATCTAGTTCATTGAGCAGAAAATTAGAGGAATTTTTTTTTATTTAAAAT

Coding sequence (CDS)

ATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA

Homology

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BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_BUFGR (Transmembrane protein 256 homolog OS=Bufo gargarizans PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.0e-16
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1


Query: 6   WHKVAGISGVAALGLGTYGSHVFK--PQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPN 65
           W ++  +SG  A+  G YG+H F+   ++   KE+++T + YH +H+ ALLA P  + P 
Sbjct: 7   WGRLGAVSGALAVTAGAYGAHGFRRSDRDEYLKELFETGNRYHFLHSLALLAVPHCRRPL 66

Query: 66  IFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           + G LLT+GI+ FSGT Y  AL  D   +  AP+GG   I  WA++
Sbjct: 67  LAGSLLTSGIVLFSGTFYYQALSGDPTLTKAAPYGGTLLILGWAAM 112

[Close]

BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_DANRE (Transmembrane protein 256 OS=Danio rerio GN=tmem256 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13
Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 1


Query: 8   KVAGISGVAALGLGTYGSHVFKPQNPA--YKEVWQTASLYHLVHTAALLAAPSTKNPNIF 67
           +VAGISG  A+  G YG+H F+    +   +E++ TA+ YH  H+ ALL A   + P + 
Sbjct: 9   RVAGISGALAVAAGAYGAHGFRRSEASDYQRELFDTANKYHFYHSLALLGAARCRKPALA 68

Query: 68  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           G +L  G+  F G  Y   L  D  +S LAP GG   I  WA++
Sbjct: 69  GVILLTGMGCFCGPLYHQPLTNDPSFSKLAPIGGSLLIVGWAAM 112

[Close]

BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_MOUSE (Transmembrane protein 256 OS=Mus musculus GN=Tmem256 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-11
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1


Query: 6   WHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 65
           + ++  +SG  ALGL +YG+H  +  +   KE++  A+ +H +H+ ALL  PS + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPSCRKPVWA 67

Query: 66  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           G LL +G   F  + Y  AL  D    TL P GG   I  W +L F
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDTSIQTLGPVGGSLLILGWLALAF 113

[Close]

BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_BOVIN (Transmembrane protein 256 OS=Bos taurus GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 6   WHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 65
           + ++  +SG  ALGL +YG+H  +  +   KE++   + +H +H+ ALLA P  + P   
Sbjct: 8   FRRLGALSGAGALGLASYGAHGAQFPDAYGKELFDKTNKHHFLHSLALLAVPLCRKPLWA 67

Query: 66  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           G LL +G   F  T Y  AL  D  +  LAP GG   +  W +L
Sbjct: 68  GLLLASGTTLFCTTFYYQALSGDPSFQNLAPVGGSLLLLGWLAL 111

[Close]

BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_HUMAN (Transmembrane protein 256 OS=Homo sapiens GN=TMEM256 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-10
Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1


Query: 6   WHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTKNPNIF 65
           + ++  +SG AALG  +YG+H  +  +   KE++  A+ +H +H+ ALL  P  + P   
Sbjct: 8   FRRLGALSGAAALGFASYGAHGAQFPDAYGKELFDKANKHHFLHSLALLGVPHCRKPLWA 67

Query: 66  GGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASL 110
           G LL +G   F  + Y  AL  D    TLAP GG   +  W +L
Sbjct: 68  GLLLASGTTLFCTSFYYQALSGDPSIQTLAPAGGTLLLLGWLAL 111

[Close]

BLAST of CmoCh19G008770 vs. TrEMBL
Match: A0A0A0K1T6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032280 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-54
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL+WHKVA ISGVAALGLGTYG+H FKP+NPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of CmoCh19G008770 vs. TrEMBL
Match: A0A067ETK0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032640mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           M+P+ WHK+A +SGVAALGLGTYG+H FKPQNP++KEVWQTASLYHLVHTAAL+AAP TK
Sbjct: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVA LEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136

[Close]

BLAST of CmoCh19G008770 vs. TrEMBL
Match: V4TKJ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017136mg PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           M+P+ WHK+A +SGVAALGLGTYG+H FKPQNP++KEVWQTASLYHLVHTAAL+AAP TK
Sbjct: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVA LEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136

[Close]

BLAST of CmoCh19G008770 vs. TrEMBL
Match: A0A151U1F5_CAJCA (UPF0451 protein C17orf61 isogeny OS=Cajanus cajan GN=KK1_005775 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.0e-51
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNP  WHKVA ISGVAALGLGTYG+HVFKPQNPAYK+VW TASLYHLVHTAAL+AAP TK
Sbjct: 1   MNPQVWHKVAAISGVAALGLGTYGAHVFKPQNPAYKDVWHTASLYHLVHTAALVAAPITK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPN+FGGLLT GILAFSGTCYTVALLEDRKYSTLAPFGGFAFI AWASL F
Sbjct: 61  NPNVFGGLLTTGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIAAWASLFF 111

[Close]

BLAST of CmoCh19G008770 vs. TrEMBL
Match: B9IAQ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s16240g PE=4 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 4.6e-51
Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           M+P  WH++A +SGVAALGLGTYG+HVFKP+NP YKEVWQTASLYHL HTAALLAAP TK
Sbjct: 1   MDPSMWHRIAAVSGVAALGLGTYGAHVFKPENPTYKEVWQTASLYHLTHTAALLAAPITK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           +PNIFGGLLT GILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  HPNIFGGLLTTGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of CmoCh19G008770 vs. TAIR10
Match: AT2G04900.1 (AT2G04900.1 unknown protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-51
Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           M+P  WHKVA ISG+AALGLGTYG+HVFKP+NP+YK+VWQTASLYHLVHTAAL++APSTK
Sbjct: 18  MDPRMWHKVAAISGMAALGLGTYGAHVFKPENPSYKQVWQTASLYHLVHTAALVSAPSTK 77

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
            PNIFGGLLTAGI+AFSGTCY VAL EDRK+STLAPFGGFAFI AWA+LLF
Sbjct: 78  YPNIFGGLLTAGIVAFSGTCYMVALREDRKFSTLAPFGGFAFIAAWATLLF 128

[Close]

BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|449453600|ref|XP_004144544.1| (PREDICTED: transmembrane protein 256 homolog [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL+WHKVA ISGVAALGLGTYG+H FKP+NPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 1   MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|659124286|ref|XP_008462078.1| (PREDICTED: transmembrane protein 256 homolog [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54
Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNPL+WHKVA ISGVAALGLGTYG+H FKP+NPAYKEVWQTASLYHLVHTAALLAAPSTK
Sbjct: 46  MNPLYWHKVAAISGVAALGLGTYGAHGFKPKNPAYKEVWQTASLYHLVHTAALLAAPSTK 105

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVALLEDRKYS+LAPFGGFAFIGAWASLLF
Sbjct: 106 NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSSLAPFGGFAFIGAWASLLF 156

[Close]

BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|719989675|ref|XP_010252723.1| (PREDICTED: transmembrane protein 256 homolog [Nelumbo nucifera])

HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52
Identity = 101/111 (90.99%), Postives = 105/111 (94.59%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNP  WHKVA ISGVAALGLGTYG+HVFKPQNPAYKEVW TASLYHLVHTAAL+AAP TK
Sbjct: 1   MNPRLWHKVAAISGVAALGLGTYGAHVFKPQNPAYKEVWHTASLYHLVHTAALVAAPITK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           +PNIFGGLLT+GILAFSGTCYTVA LEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 61  HPNIFGGLLTSGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 111

[Close]

BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|567910869|ref|XP_006447748.1| (hypothetical protein CICLE_v10017136mg [Citrus clementina])

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-51
Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           M+P+ WHK+A +SGVAALGLGTYG+H FKPQNP++KEVWQTASLYHLVHTAAL+AAP TK
Sbjct: 26  MDPVIWHKIAAVSGVAALGLGTYGAHGFKPQNPSFKEVWQTASLYHLVHTAALVAAPITK 85

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPNIFGGLLTAGILAFSGTCYTVA LEDRKYSTLAPFGGFAFIGAWASLLF
Sbjct: 86  NPNIFGGLLTAGILAFSGTCYTVAFLEDRKYSTLAPFGGFAFIGAWASLLF 136

[Close]

BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|1012361979|gb|KYP73162.1| (UPF0451 protein C17orf61 isogeny [Cajanus cajan])

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-51
Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 1


Query: 1   MNPLHWHKVAGISGVAALGLGTYGSHVFKPQNPAYKEVWQTASLYHLVHTAALLAAPSTK 60
           MNP  WHKVA ISGVAALGLGTYG+HVFKPQNPAYK+VW TASLYHLVHTAAL+AAP TK
Sbjct: 1   MNPQVWHKVAAISGVAALGLGTYGAHVFKPQNPAYKDVWHTASLYHLVHTAALVAAPITK 60

Query: 61  NPNIFGGLLTAGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIGAWASLLF 112
           NPN+FGGLLT GILAFSGTCYTVALLEDRKYSTLAPFGGFAFI AWASL F
Sbjct: 61  NPNVFGGLLTTGILAFSGTCYTVALLEDRKYSTLAPFGGFAFIAAWASLFF 111

The following BLAST results are available for this feature:

BLAST of CmoCh19G008770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TM256_BUFGR	4.0e-16	39.62	Transmembrane protein 256 homolog OS=Bufo gargarizans PE=3 SV=1	[more]
TM256_DANRE	1.9e-13	38.46	Transmembrane protein 256 OS=Danio rerio GN=tmem256 PE=3 SV=1	[more]
TM256_MOUSE	1.7e-11	35.85	Transmembrane protein 256 OS=Mus musculus GN=Tmem256 PE=1 SV=1	[more]
TM256_BOVIN	1.1e-10	34.62	Transmembrane protein 256 OS=Bos taurus GN=TMEM256 PE=3 SV=1	[more]
TM256_HUMAN	2.5e-10	34.62	Transmembrane protein 256 OS=Homo sapiens GN=TMEM256 PE=3 SV=1	[more]

BLAST of CmoCh19G008770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1T6_CUCSA	1.2e-54	94.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032280 PE=4 SV=1	[more]
A0A067ETK0_CITSI	1.6e-51	88.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032640mg PE=4 SV=1	[more]
V4TKJ4_9ROSI	1.6e-51	88.29	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017136mg PE=4 SV=1	[more]
A0A151U1F5_CAJCA	2.0e-51	89.19	UPF0451 protein C17orf61 isogeny OS=Cajanus cajan GN=KK1_005775 PE=4 SV=1	[more]
B9IAQ8_POPTR	4.6e-51	87.39	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s16240g PE=4 SV=2	[more]

BLAST of CmoCh19G008770 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04900.1	1.1e-51	83.78	unknown protein	[more]

BLAST of CmoCh19G008770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453600\|ref\|XP_004144544.1\|	1.7e-54	94.59	PREDICTED: transmembrane protein 256 homolog [Cucumis sativus]	[more]
gi\|659124286\|ref\|XP_008462078.1\|	1.7e-54	94.59	PREDICTED: transmembrane protein 256 homolog [Cucumis melo]	[more]
gi\|719989675\|ref\|XP_010252723.1\|	5.9e-52	90.99	PREDICTED: transmembrane protein 256 homolog [Nelumbo nucifera]	[more]
gi\|567910869\|ref\|XP_006447748.1\|	2.2e-51	88.29	hypothetical protein CICLE_v10017136mg [Citrus clementina]	[more]
gi\|1012361979\|gb\|KYP73162.1\|	2.9e-51	89.19	UPF0451 protein C17orf61 isogeny [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006696	DUF423

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G008770.1	CmoCh19G008770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006696	Protein of unknown function DUF423	PFAM	PF04241	DUF423	coord: 20..99 score: 2.6
None	No IPR available	PANTHER	PTHR10584	SUGAR KINASE	coord: 3..66 score: 7.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G008770	Cucsa.100370	Cucumber (Gy14) v1	cgycmoB0210
CmoCh19G008770	CmaCh19G008630	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G008770	Cla015684	Watermelon (97103) v1	cmowmB496
CmoCh19G008770	Csa7G032280	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G008770	MELO3C024201	Melon (DHL92) v3.5.1	cmomeB452
CmoCh19G008770	ClCG02G002790	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G008770	CSPI07G02760	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G008770	Lsi11G013530	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G008770	Cp4.1LG15g07000	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G008770	MELO3C024201.2	Melon (DHL92) v3.6.1	cmomedB521
CmoCh19G008770	CsaV3_7G002590	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G008770	Cla97C02G029280	Watermelon (97103) v2	cmowmbB512
CmoCh19G008770	Bhi05G001288	Wax gourd	cmowgoB0653
CmoCh19G008770	Carg04151	Silver-seed gourd	carcmoB0286

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G008770	Watermelon (97103) v2	cmowmbB511
CmoCh19G008770	Wax gourd	cmowgoB0663
CmoCh19G008770	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh19G008770	Cucurbita moschata (Rifu)	cmocmoB381
CmoCh19G008770	Cucumber (Gy14) v1	cgycmoB0294
CmoCh19G008770	Cucurbita maxima (Rimu)	cmacmoB145
CmoCh19G008770	Cucurbita maxima (Rimu)	cmacmoB549
CmoCh19G008770	Wild cucumber (PI 183967)	cmocpiB520
CmoCh19G008770	Cucumber (Chinese Long) v2	cmocuB513
CmoCh19G008770	Melon (DHL92) v3.5.1	cmomeB443
CmoCh19G008770	Cucurbita pepo (Zucchini)	cmocpeB483
CmoCh19G008770	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G008770	Bottle gourd (USVL1VR-Ls)	cmolsiB452
CmoCh19G008770	Cucumber (Gy14) v2	cgybcmoB763
CmoCh19G008770	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G008770	Melon (DHL92) v3.6.1	cmomedB513
CmoCh19G008770	Silver-seed gourd	carcmoB0471
CmoCh19G008770	Silver-seed gourd	carcmoB1091
CmoCh19G008770	Silver-seed gourd	carcmoB1430
CmoCh19G008770	Cucumber (Chinese Long) v3	cmocucB0617