CmoCh19G008770 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAGAAAGCCCTTCACAAAACTCTTCTTGAAGTCACTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGTAATATCACCCCCGATTCTCCTGCTGTAGATTCTTGATTTGGATTTTGATTCGATTTCGGCGTTAAACAGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTGATTTGCTTCATCTTTCGCTGCTTTGAATCGATTTGATTTTGATTGTTTTTTTTTCTCCTGTAAAATCCTGTGAAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTGTAAGTTTCCCCCCTTTTTTCATTCCTCGCGTTTGCAGTACCGTTTCTGGATGTAAATTTTCTCCTTCTGATCATTTTGGGCAAGGCTTATTGATATCAAACGATTATTCAACTCGACCTAACCTGAAAGTAGGAACTAATCTTAAGCTTTAGAGTATGGTGGAAATCAAAGCACTAGATGTTGTGTTTGAATGTTTTGAATCCATTCAGATCTTTTTTCTTTCCCTGGTATAAATTCTTCACATGTTAGGTGGATTCAGCTATAACATTCAAGCCCACAAATAAAACTTGCCATATGTGTATACCCAAACTGTCTCGTTTTATTACCATTTGATATTTTGTTTTTGGAAATTGTGCTTATTTTCTCCAATTTCTTTACGAGGTCTTCATCTTTGCTAATTAAACACTTCAAATCTTAGTCAAATTCCAAATATATAAACAAGATTTTAAACTATTTTGTGGATTTTAAGAACATATGGCAGAATAAAGAACTCATAGGTAGAACTTTTATAAACTCGCTTTCAAAAAACTTAATGGTTACGAAGTAAGACCTGAACTTTTAGTTTTTAGATTTCGCATTGATTTGATGGAAATTAATATTTAAGCTTATCTACAAGTCTAGCTTCTTCCCCAAATGTGTATATATCTATCTATCTATATATATATAGATATATATATAAAAGTATATGTATATATATATTGTCTAATATATCTTATAGGTAAAAGGGTACACACACATAATTTTATCTATGTCAATGTAAATGAATGAGGAACACACGTTAACGAATGTTTTAAAAGATAAAGTTACTCTTCCAAAATTTCCCTAATATTTAAGTTGGTTTTGTGTTTTTCCCCTACTTTGATGGGTCCTTTGATGCTATCTTTATGTTTTTTTTTGGACAGTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTAAGACCCATTTTTTGTTTCATCTTTGATGTTTGTTTGGATCTCTCTCTCTTTTGTTTCTATTTGATTTCGCATTCATGTGTCTAAGTTTCCATGATTTACCTGTCACAACATTTCTCAATCTGAAGCTGAATTCATATTCAGTTTTCTTTTGCCCTTTTAACTGATAAGCACAACATTTAATTGATATGATGAATTATACAAAAGAGAGAATAAAAATCCCAAAAAACACTTGATCGACTGATGAGTTAGAAAAGAAAAGCTGTTGAGTTGGCTGAGAAAAATTGTACATGAAGTGAGACTAGTAAGAAGTATGAGACGAGAAAAGATCACCGATAGGAGAAGCTATTGAGAAAAATGTGTACATGAGAAAACGGGCAAAGGGTAATTTATGAAGGAAAAACGTGTACGATGAGAGAACTTAGTGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCTGAAAGAGATCGATTATGAAGTGTTTGAGCCTAATGCATATGATAAACCTCACCCATTAGTGACTCCCTTGCAAAGCACCTCGTTATTAGTTGTGAGATTCCACATCGGCTGGAGAGGAGAATGAAGCATTCCATAAGAGTGTAGAGAGAAGTGAGAGATTAGATGAAGAAAGTTTGTCCGAAAGAGATCGATTATGAAGTGTTTGAGCCTAATGCATCTCATAAACCACACCCATTAGTGACTTCCTTGCAAAGCACCTAGTTATTAGTTGTGAGATCCTACGAAGCATTCCTTATAAGAGTGTGGAAACCTCTCTATAGACGCGTTTTAAAACCTTGGGGGGAATTCCTGGAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGCGGTGTACTTGGGCCGTTGCATTAGTGCTTTGACTTTTTTTTTTTTTTTTTCCTTCTTTTCGTTTCTTTCTTTATTGAATCTGATCCAAAAGGGCTTAAAAAAGGCATGTAGGACTGATTGAGCATAGAACAGCTTTGGACTCAATTGAAATCTCTTCCAGTTTCCTTTTAGCAGGTTCATATTGAACTCATGTCTGTTTCAGAGATGTATAAGAATGTGTGCTTCCATTGCAGGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAAATTTACCCAGTTTCGATATCTTTTCGATTACTTATGGCTTCACGTATACTTCTGCACATATTCTGTGAAGAATTTCGATGTTTTTCGATAAAAGATATCCGAATCTCGGAAGCTTACTCATCTTCTTCCTCTTCCTCAGATTGTAAAAACGTGAAAGAATCCAAGTGCAGTATAAATGGAATAGTTCATTCATGAATTTAGAGGCAAAAAAATGGTTCAGAATAAAGGGTAGATTCATTAAAATCTAGTTCATTGAGCAGAAAATTAGAGGAATTTTTTTTTATTTAAAAT GACAGGTCGTTCTAATTTCAAACCATCGTCATCATATGTGGAAATAAAAAAGGGGAAATTAGAAAGCCCTTCACAAAACTCTTCTTGAAGTCACTCCATTTCAAGCCCAGAAAGCAAAGAACAAGATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAAATTTACCCAGTTTCGATATCTTTTCGATTACTTATGGCTTCACGTATACTTCTGCACATATTCTGTGAAGAATTTCGATGTTTTTCGATAAAAGATATCCGAATCTCGGAAGCTTACTCATCTTCTTCCTCTTCCTCAGATTGTAAAAACGTGAAAGAATCCAAGTGCAGTATAAATGGAATAGTTCATTCATGAATTTAGAGGCAAAAAAATGGTTCAGAATAAAGGGTAGATTCATTAAAATCTAGTTCATTGAGCAGAAAATTAGAGGAATTTTTTTTTATTTAAAAT ATGAACCCACTTCACTGGCACAAAGTCGCTGGGATTTCTGGCGTTGCAGCTCTTGGATTGGGCACGTACGGTTCCCATGTCTTCAAACCCCAAAATCCGGCTTATAAAGAGGTTTGGCAAACGGCGTCTCTGTATCATTTGGTTCACACAGCGGCTCTGCTTGCTGCCCCTTCGACCAAGAACCCTAACATTTTTGGAGGCCTTTTGACTGCTGGAATTCTTGCATTTTCGGGCACGTGCTATACTGTGGCCCTTCTTGAAGATAGAAAATACTCTACCTTAGCTCCATTTGGTGGCTTTGCTTTCATTGGTGCATGGGCTAGCTTGCTCTTCTAA
BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_BUFGR (Transmembrane protein 256 homolog OS=Bufo gargarizans PE=3 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.0e-16 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 1
BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_DANRE (Transmembrane protein 256 OS=Danio rerio GN=tmem256 PE=3 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.9e-13 Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 1
BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_MOUSE (Transmembrane protein 256 OS=Mus musculus GN=Tmem256 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.7e-11 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1
BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_BOVIN (Transmembrane protein 256 OS=Bos taurus GN=TMEM256 PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10 Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1
BLAST of CmoCh19G008770 vs. Swiss-Prot
Match: TM256_HUMAN (Transmembrane protein 256 OS=Homo sapiens GN=TMEM256 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.5e-10 Identity = 36/104 (34.62%), Postives = 55/104 (52.88%), Query Frame = 1
BLAST of CmoCh19G008770 vs. TrEMBL
Match: A0A0A0K1T6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G032280 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.2e-54 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of CmoCh19G008770 vs. TrEMBL
Match: A0A067ETK0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032640mg PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51 Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 1
BLAST of CmoCh19G008770 vs. TrEMBL
Match: V4TKJ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017136mg PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 1.6e-51 Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 1
BLAST of CmoCh19G008770 vs. TrEMBL
Match: A0A151U1F5_CAJCA (UPF0451 protein C17orf61 isogeny OS=Cajanus cajan GN=KK1_005775 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.0e-51 Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 1
BLAST of CmoCh19G008770 vs. TrEMBL
Match: B9IAQ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s16240g PE=4 SV=2) HSP 1 Score: 208.4 bits (529), Expect = 4.6e-51 Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 1
BLAST of CmoCh19G008770 vs. TAIR10
Match: AT2G04900.1 (AT2G04900.1 unknown protein) HSP 1 Score: 199.5 bits (506), Expect = 1.1e-51 Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = 1
BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|449453600|ref|XP_004144544.1| (PREDICTED: transmembrane protein 256 homolog [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|659124286|ref|XP_008462078.1| (PREDICTED: transmembrane protein 256 homolog [Cucumis melo]) HSP 1 Score: 220.3 bits (560), Expect = 1.7e-54 Identity = 105/111 (94.59%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|719989675|ref|XP_010252723.1| (PREDICTED: transmembrane protein 256 homolog [Nelumbo nucifera]) HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52 Identity = 101/111 (90.99%), Postives = 105/111 (94.59%), Query Frame = 1
BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|567910869|ref|XP_006447748.1| (hypothetical protein CICLE_v10017136mg [Citrus clementina]) HSP 1 Score: 209.9 bits (533), Expect = 2.2e-51 Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 1
BLAST of CmoCh19G008770 vs. NCBI nr
Match: gi|1012361979|gb|KYP73162.1| (UPF0451 protein C17orf61 isogeny [Cajanus cajan]) HSP 1 Score: 209.5 bits (532), Expect = 2.9e-51 Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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