CsaV3_7G002500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002500
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 1966316 .. 1966546 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGCCATGTTAGGAGGTAGCACGTACATTGTAAACTGCCACTGCTCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACATGAGTCTGCTTCTTCTTTCATTGGGCCATGCTGACAGCAATGTGCTTGGATGTAGATCTTCAAAAGAGACATCTCCAGTGCTACCATAA

mRNA sequence

ATGCAGGCCATGTTAGGAGGTAGCACGTACATTGTAAACTGCCACTGCTCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACATGAGTCTGCTTCTTCTTTCATTGGGCCATGCTGACAGCAATGTGCTTGGATGTAGATCTTCAAAAGAGACATCTCCAGTGCTACCATAA

Coding sequence (CDS)

ATGCAGGCCATGTTAGGAGGTAGCACGTACATTGTAAACTGCCACTGCTCTCCTTTTGCGTATGGAGTTGAGAGTTTGGTGGTTAAATGTTGGCATCACCAAGTTGGAGATGCTGACACTGCCACTCGGTGGAGCATCTACATGAGTCTGCTTCTTCTTTCATTGGGCCATGCTGACAGCAATGTGCTTGGATGTAGATCTTCAAAAGAGACATCTCCAGTGCTACCATAA

Protein sequence

MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADSNVLGCRSSKETSPVLP
Homology
[Close]
BLAST of CsaV3_7G002500 vs. NCBI nr
Match: KGN43406.1 (hypothetical protein Csa_7G031670 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 5.0e-38
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60
          MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS
Sbjct: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60

Query: 61 NVLGCRSSKETSPVLP 77
          NVLGCRSSKETSPVLP
Sbjct: 61 NVLGCRSSKETSPVLP 76

[Close]
BLAST of CsaV3_7G002500 vs. TrEMBL
Match: tr|A0A0A0K6F3|A0A0A0K6F3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031670 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.3e-38
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60
          MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS
Sbjct: 1  MQAMLGGSTYIVNCHCSPFAYGVESLVVKCWHHQVGDADTATRWSIYMSLLLLSLGHADS 60

Query: 61 NVLGCRSSKETSPVLP 77
          NVLGCRSSKETSPVLP
Sbjct: 61 NVLGCRSSKETSPVLP 76

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43406.15.0e-38100.00hypothetical protein Csa_7G031670 [Cucumis sativus][more]
BLAST of CsaV3_7G002500 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002500 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K6F3|A0A0A0K6F3_CUCSA3.3e-38100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G031670 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002500.1CsaV3_7G002500.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G002500ClCG02G002900Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002500Cla97C02G029410Watermelon (97103) v2cucwmbB549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002500Cucumber (Chinese Long) v3cuccucB214
CsaV3_7G002500Silver-seed gourdcarcucB0232
CsaV3_7G002500Silver-seed gourdcarcucB0386
CsaV3_7G002500Silver-seed gourdcarcucB1114
CsaV3_7G002500Cucumber (Gy14) v2cgybcucB306
CsaV3_7G002500Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002500Cucumber (Gy14) v1cgycucB116
CsaV3_7G002500Cucumber (Gy14) v1cgycucB160
CsaV3_7G002500Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002500Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002500Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G002500Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002500Cucurbita moschata (Rifu)cmocucB0162
CsaV3_7G002500Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002500Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G002500Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002500Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002500Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002500Cucurbita pepo (Zucchini)cpecucB0870
CsaV3_7G002500Wild cucumber (PI 183967)cpicucB375
CsaV3_7G002500Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002500Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002500Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002500Melon (DHL92) v3.5.1cucmeB534
CsaV3_7G002500Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G002500Melon (DHL92) v3.6.1cucmedB521
CsaV3_7G002500Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G002500Watermelon (97103) v1cucwmB634
CsaV3_7G002500Wax gourdcucwgoB695
CsaV3_7G002500Wax gourdcucwgoB703